Ambiguous controls on simulated diazotrophs in the world oceans.

Nitrogen fixers, or diazotrophs, play a key role in the nitrogen and carbon cycle of the world oceans. Diazotrophs are capable of utilising atmospheric dinitrogen which is a competitive advantage over generally faster growing ordinary phytoplankton in nitrogen-depleted conditions in the sun-lit surface ocean. In this study we argue that additional competitive advantages must be at play in order to explain the dynamics and distribution of diazotrophs in the global oceans. Backed by growing published evidence we test the effects of preferential grazing (where zooplankton partly avoids diazotrophs) and high-affinity diazotrophic phosphorus uptake in an Earth System Model of intermediate complexity. Our results illustrate that these fundamentally different model assumptions result in a very similar match to observation-based estimates of nitrogen fixation while, at the same time, they imply very different trajectories into our warming future. The latter applies to biomass, fixation rates as well as to the ratio of the two. We conclude that a more comprehensive understanding of the competition between ordinary and diazotrophic phytoplankton will reduce uncertainties in model-based projections of the oceanic N cycle.

Retracing cyanobacteria blooms in the Baltic Sea.

In late summer, massive blooms and surface scums of cyanobacteria emerge regularly in the Baltic Sea. The bacteria can produce toxins and add bioavailable nitrogen fixed from atmospheric nitrogen to an already over-fertilized system. This counteracts management efforts targeted at improving water quality. Despite their critical role, the controls on cyanobacteria blooms are not comprehensively understood yet. This limits the usability of models-based bloom forecasts and projections into our warming future. Here we add to the discussion by combining, for the first time, satellite estimates of cyanobacteria blooms with output of a high-resolution general ocean circulation model and in-situ nutrient observations. We retrace bloom origins and conditions by calculating the trajectories of respective water parcels backwards in time. In an attempt to identify drivers of bloom development, we find that blooms originate and manifest themselves predominantly offshore where conditions are more nutrient-depleted compared to more coastal environments.

Mapping manifestations of parametric uncertainty in projected pelagic oxygen concentrations back to contemporary local model fidelity.

Pelagic biogeochemical models (BGCMs) have matured into generic components of Earth System Models. BGCMs mimic the effects of marine biota on oceanic nutrient, carbon and oxygen cycles. They rely on parameters that are adjusted to match observed conditions. Such parameters are key to determining the models' responses to changing environmental conditions. However, many of these parameters are difficult to constrain and constitute a major source of uncertainty in BGCM projections. Here we use, for the first time, variance-based sensitivity analyses to map BGCM parameter uncertainties onto their respective local manifestation in model entities (such as oceanic oxygen concentrations) for both contemporary climate and climate projections. The mapping effectively relates local uncertainties of projections to the uncertainty of specific parameters. Further, it identifies contemporary benchmarking regions, where the uncertainties of specific parameters manifest themselves, thereby facilitating an effective parameter refinement and a reduction of the associated uncertainty. Our results demonstrate that the parameters that are linked to uncertainties in projections may differ from those parameters that facilitate model conformity with present-day observations. In summary, we present a practical approach to the general question of where present-day model fidelity may be indicative for reliable projections.

Gene Ontology annotations and resources.

The Gene Ontology (GO) Consortium (GOC, http://www.geneontology.org) is a community-based bioinformatics resource that classifies gene product function through the use of structured, controlled vocabularies. Over the past year, the GOC has implemented several processes to increase the quantity, quality and specificity of GO annotations. First, the number of manual, literature-based annotations has grown at an increasing rate. Second, as a result of a new 'phylogenetic annotation' process, manually reviewed, homology-based annotations are becoming available for a broad range of species. Third, the quality of GO annotations has been improved through a streamlined process for, and automated quality checks of, GO annotations deposited by different annotation groups. Fourth, the consistency and correctness of the ontology itself has increased by using automated reasoning tools. Finally, the GO has been expanded not only to cover new areas of biology through focused interaction with experts, but also to capture greater specificity in all areas of the ontology using tools for adding new combinatorial terms. The GOC works closely with other ontology developers to support integrated use of terminologies. The GOC supports its user community through the use of e-mail lists, social media and web-based resources.

[Neonatal ultrasonographic cerebral findings: association with risk factor for cerebral palsy]. / Stellenwert der postnatalen Neurosonographie für die frühzeitige Erfassung und ursächliche Klärung der Zerebralparese.

BACKGROUND: Is it possible to identify patients with cerebral palsy (CP) with postnatal ultrasound scan? Which risk factors are associated with an increased risk of CP?. PATIENTS AND METHODS: The data of 37 children with CP, who were sonographically investigated during the first 24 hours of life were analyzed retrospectively. The data of 21 preterm infants with gestational age /= 33 wk and in 5/8 of the mature babies. The mature babies had prenatal brain atrophy or hypoxic-ischaemic cerebral lesions. Cytomegaly and encephalitis were detected in two babies. Immature babies >/= 33 wk showed prenatal porencephaly or encephalomalacia after asphyxia. Premature babies

Multielemental analysis in small amounts of environmental reference materials with inductively coupled plasma mass spectrometry.

The lowest possible sample weight for performing multielemental trace element analysis on environmental and biological samples by ICP-MS has been investigated. The certified reference materials Bovine Liver NIST SRM 1577b, Human Hair NCS DC 73347 and Oriental Tobacco Leaves CTA-OTL-1 were applied at sample weights (1, 5, 20 and 50 mg aliquots, n = 10) which were significantly lower than those recommended with most recoveries in the range of 95-110%. Samples were digested in a mixture of nitric acid, hydrogen peroxide and hydrogen fluoride by closed-vessel microwave digestion. Multielemental analysis was performed with an optimized ICP-QMS method. Aqueous standard solutions were applied for external calibration with rhodium as the internal standard element. The detection limits varied between 0.02-0.38 microg/g for Li, Na, Cr, Mn, Ni, Cu, Zn, Sr, Cd, Ba and Pb, and up to 1.92 microg/g for Mg, Al, Ca, Fe and Ni. Digested human plasma samples were spiked with multielemental solution (0.5-10 microg/L) to test the analytical method and the recoveries were 95-105% for most analytes. Our results show that in the case of homogeneous SRMs it is possible to use them in very low amounts (1-5 mg) for method development and quality control.

A new strategy of solution calibration in laser ablation inductively coupled plasma mass spectrometry for multielement trace analysis of geological samples.

Because multielement trace analysis by laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) is often limited by the lack of suitable reference materials with a similar matrix composition, a novel quantification strategy using solution calibration was developed. For mass spectrometric multielement determination in geological samples a quadrupole-based LA-ICP-MS is coupled with an ultrasonic nebulizer (USN). In order to arrange matrix matching the standard solutions are nebulized with a USN during solution calibration and simultaneously a blank target (e.g. lithium borate) is ablated with a focused laser beam. The homogeneous geological samples were measured using the same experimental arrangement where a 2% nitric acid is simultaneously nebulized with the USN. Homogeneous targets were prepared from inhomogeneous geological samples by powdering, homogenizing and fusing with a lithium borate mixture in a muffle furnace at 1050 degrees C. Furthermore, a homogeneous geological glass was also investigated. The quantification of analytical results was performed by external calibration using calibration curves measured on standard solutions. In order to compare two different approaches for the quantification of analytical results in LA-ICP-MS, measured concentrations in homogeneous geological targets were also corrected with relative sensitivity coefficients (RSCs) determined using one standard solution only. The analytical results of LA-ICP-MS on various geological samples are in good agreement with the reference values and the results of other trace analytical methods. The relative standard deviation (RSD) for trace element determination (N = 6) is between 2 and 10%.

Precise and accurate isotope ratio measurements by ICP-MS.

The precise and accurate determination of isotope ratios by inductively coupled plasma mass spectrometry (ICP-MS) and laser ablation ICP-MS (LA-ICP-MS) is important for quite different application fields (e.g. for isotope ratio measurements of stable isotopes in nature, especially for the investigation of isotope variation in nature or age dating, for determining isotope ratios of radiogenic elements in the nuclear industry, quality assurance of fuel material, for reprocessing plants, nuclear material accounting and radioactive waste control, for tracer experiments using stable isotopes or long-lived radionuclides in biological or medical studies). Thermal ionization mass spectrometry (TIMS), which used to be the dominant analytical technique for precise isotope ratio measurements, is being increasingly replaced for isotope ratio measurements by ICP-MS due to its excellent sensitivity, precision and good accuracy. Instrumental progress in ICP-MS was achieved by the introduction of the collision cell interface in order to dissociate many disturbing argon-based molecular ions, thermalize the ions and neutralize the disturbing argon ions of plasma gas (Ar+). The application of the collision cell in ICP-QMS results in a higher ion transmission, improved sensitivity and better precision of isotope ratio measurements compared to quadrupole ICP-MS without the collision cell [e.g., for 235U/238U approximately 1 (10 microg x L(-1) uranium) 0.07% relative standard deviation (RSD) vs. 0.2% RSD in short-term measurements (n = 5)]. A significant instrumental improvement for ICP-MS is the multicollector device (MC-ICP-MS) in order to obtain a better precision of isotope ratio measurements (with a precision of up to 0.002%, RSD). CE- and HPLC-ICP-MS are used for the separation of isobaric interferences of long-lived radionuclides and stable isotopes by determination of spallation nuclide abundances in an irradiated tantalum target.

Determination of trace elements in zeolites by laser ablation ICP-MS.

Laser ablation inductively coupled plasma mass spectrometry using a quadrupole-based mass spectrometer (LA-ICP-QMS) was applied for the analysis of powdered zeolites (microporous aluminosilicates) used for clean-up procedures. For the quantitative determination of trace element concentrations three geological reference materials, granite NIM-G, lujavrite NIM-L and syenite NIM-S, from the National Institute for Metallurgy (South Africa) with a matrix composition corresponding to the zeolites were employed. Both the zeolites and reference materials were fused with a lithium borate mixture to increase the homogeneity and to eliminate mineralogical effects. In order to compare two different approaches for the quantification of analytical results in LA-ICP-MS relative sensitivity coefficients (RSCs) of chemical elements and calibration curves were measured using the geostandards. The experimentally obtained RSCs are in the range of 0.2-6 for all elements of interest. Calibration curves for trace elements were measured without and with Li or Ti as internal standard element. With a few exceptions the regression coefficients of the calibration curves are better than 0.993 with internal standardization. NIM-G granite reference material was employed to evaluate the accuracy of the technique. Therefore, the measured concentrations were corrected with RSCs which were determined using lujavrite reference material NIM-L. This quantification method provided analytical results with deviations of 1-11% from the recommended and proposed values in granite reference material NIM-G, except for Co, Cs, La and Tb. The relative standard deviation (RSD) of the determination of the trace element concentration (n = 5) is about 1% to 6% using Ti as internal standard element. Detection limits of LA-ICP-QMS in the lower microg/g range (from 0.03 microg/g for Lu, Ta and Th to 7.3 microg/g for Cu, with the exception of La) have been achieved for all elements of interest. Under the laser ablation conditions employed (lambda: 266 nm, repetition frequency: 10 Hz, pulse energy: 10 mJ, laser power density: 6 x 10(9) W/cm2) fractionation effects of the determined elements relative to the internal standard element Ti were not observed.

Ultratrace and isotope analysis of long-lived radionuclides by inductively coupled plasma quadrupole mass spectrometry using a direct injection high efficiency nebulizer.

The direct injection high efficiency nebulizer (DIHEN) was explored for the ultrasensitive determination of long-lived radionuclides ((226)Ra, (230)Th, (237)Np, (238)U, (239)Pu, and (241)Am) and for precise isotope analysis by inductively coupled plasma mass spectrometry (ICPMS). The DIHEN was used at low solution uptake rates (1-100 µL/min) without a spray chamber. Optimal sensitivity (e.g., (238)U, 230 MHz/ppm; (230)Th, 190 MHz/ppm; and (239)Pu, 184 MHz/ppm) was achieved at low nebulizer gas flow rates (0.16 L/min), high rf power (1450 W), and low solution uptake rates (100 µL/min). The optimum parameters varied slightly for the two DIHENs tested. The detection limits of long-lived radionuclides in aqueous solutions varied from 0.012 to 0.11 ng/L. The sensitivity of the DIHEN was improved by a factor of 3 to 5 compared with that of a microconcentric nebulizer (MicroMist used with a minicyclonic spray chamber at a solution uptake rate of 85 µL/min) and a factor of 1.5 to 4 compared with that of a conventional nebulizer (cross-flow used with a Scott type spray chamber at a solution uptake rate of 1 mL/min). The precision of the DIHEN ranged from 0.5 to 1.7% RSD (N = 3) for all measurements at the 10 ng/L concentration level (∼3 pg sample size). The sensitivity decreased to 10 MHz/ppm at a solution uptake rate of 1 µL/min. The precision was about 5% RSD at a sample size of 30 fg for each long-lived radionuclide by the DIHEN-ICPMS method. The oxide to atom ratios were less than 0.05 (except ThO(+)/Th(+) ) and decreased under the optimum conditions in the following sequence: ThO(+)/Th(+) > UO(+)/U(+) > NpO(+)/Np(+) > PuO(+)/Pu(+) > AmO(+)/Am(+) > RaO(+)/Ra(+). Atomic and oxide ions were used as analyte ions for ultratrace and isotope analyses of long-lived radionuclides in environmental and radioactive waste samples. The analytical methods developed were applied to the determination of long-lived radionuclides and isotope ratio measurements in different radioactive waste and environmental samples using the DIHEN in combination with quadrupole ICPMS. For instance, the (240)Pu/(239)Pu isotope ratio was measured in a radioactive waste sample at a plutonium concentration of 12 ng/L. This demonstrates a main advantage of DIHEN-ICPMS compared with α-spectrometry, which cannot be used to selectively determine (239)Pu and (240)Pu because of similar α energies (5.244 and 5.255 MeV, respectively).

Separation of paraproteins from human plasma by membrane chromatography.

Membrane chromatography using a commercially available blotting membrane was performed in a dead-end filtration mode to separate paraproteins from plasma of patients suffering from paraproteinemia. The affinity membrane was found to display distinct specificity to monoclonal IgG1. A dissociation constant (Kd) of 3.2 microM and a maximum binding capacity of 1.43 mg/cm2 IgG1 paraprotein were obtained from the adsorption isotherm of the affinity membrane. The membrane was found to absorb immunoglobulins species-dependently because no binding of immunoglobulins from mouse, rat and rabbit could be observed.

Optimization of an rf-powered magnetron glow discharge for the trace analysis of glasses and ceramics.

A radiofrequency (rf) powered planar magnetron glow discharge ion source has been designed and coupled to a double-focusing mass spectrometer. Superposition of the electrical field of the plasma in the cathode dark space and the magnetic field obtained from a ring-shaped magnet located directly behind the sample (cathode) form the electron traps and enhance the sputtering and ionization efficiency of the ion source. In order to establish optimum conditions for the trace analysis of nonconducting materials, mass spectrometric studies have been carried out on the ion signal intensities and energy distributions of analyte and discharge gas ions depending on pressure.

Trace and surface analysis of ceramic layers of solid oxide fuel cells by mass spectrometry.

For the trace analysis of impurities in thick ceramic layers of a solid oxide fuel cell (SOFC) sensitive solid-state mass spectrometric methods, such as laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) and radiofrequency glow discharge mass spectrometry (rf-GDMS) have been developed and used. In order to quantify the analytical results of LA-ICP-MS, the relative sensitivity coefficients of elements in a La(0.6)Sr(0.35)MnO(3) matrix have been determined using synthetic standards. Secondary ion mass spectrometry (SIMS) - as a surface analytical method - has been used to characterize the element distribution and diffusion profiles of matrix elements on the interface of a perovskite/Y-stabilized ZrO(2) layer. The application of different mass spectrometric methods for process control in the preparation of ceramic layers for the SOFC is described.

Comparative studies of MCs(+)-SIMS and e(-)-beam SNMS for quantitative analysis of bulk materials and layered structures.

For the quantification of heterostructure depth profiles the knowledge of relative sensitivity factors (RSF) and the influence of matrix effects on the measured profiles is necessary. Matrix dependencies of the measured ion intensities have been investigated for sputtered neutral mass spectrometry (SNMS) and MCs(+)-SIMS. The use of Cs as primary ions for SNMS is advantageous compared to Ar because the depth resolution is improved without changing RSFs determined under Ar bombardment. No significant amount of molecules has been found in the SNMS spectra under Cs bombardment. Using MCs(+)-SIMS the RSFs are matrix dependent. An improvement of depth resolution can be achieved by biasing the sample against the primary ion beam for SNMS due to a reduction of the net energy of the primary ions and a resulting more gracing impact angle.

Quantitative determination of element distributions in silicon based thin film solar cells using SNMS.

The determination of elemental distributions in thin film solar cells based on amorphous silicon using electron beam SNMS is possible by quantifying the measured ion intensities. The relative sensitivity factors (RSFs) for all elements measured have to be known. The RSFs have been determined experimentally using implantation and bulk standards with known concentrations of the interesting elements. The measured RSFs have been compared with calculated RSFs. The model used for the calculation of the RSFs takes into account the probability for electron impact ionization and the dwell time of the neutrals inside the postionization region. The comparison between measured and calculated RSF shows, that this model is capable to explain the RSFs for most elements. Differences between calculated and measured values can be explained by the formation of hydride and fluoride molecules (in case of H and F) and influences of the angular distribution of the sputtered neutrals in case of Al. The experimentally determined RSFs have been used for a quantification of depth profiles of the i-, buffer-, p- and front contact layers of a-Si solar cells.

[Acquired dysfibrinogenemia in a child in the course of a liver disease]. / Erworbene Dysfibrinogenämie bei einem Kind im Verlauf einer Lebererkrankung.

This report documents the results of coagulation studies in a 15-year old boy with hepatic disease of possibly autoimmune origin. Thrombin- and reptilase clotting times were prolonged. The results of fibrinogen determinations with different methods (heat precipitation, kinetic assay according to Clauss) lead to the assumption of a qualitative anomaly of fibrinogen (dysfibrinogenaemia). Investigations with purified fibrinogens from the patient and a healthy control confirmed this assumption. The thrombin clotting time of purified fibrinogen from the patient was clearly prolonged in comparison to the purified fibrinogen from a healthy control. The fibrin monomers of the patient exhibited impaired polymerization. No structural abnormalities were detected by electrophoretic techniques, particularly the thrombin-induced release of fibrinopeptides was found to be normal. The coagulation abnormalities resolved after glucocorticoid administration.

[Subjective factor in EEG evaluation exemplified by the nonspecific hyperventilation effect]. / Zum subjektiven Faktor in der EEG-Beurteilung am Beispiel des unspezifischen Hyperventilationseffektes.

Subjective differences in EEG evaluation are demonstrated by means of a seven step scale for grading the unspecific hyperventilation effect in 3263 EEG of children. Intermediate steps of this scale allow to minimize such unavoidable differences.