Global distribution of soil fauna functional groups and their estimated litter consumption across biomes.

Soil invertebrates (i.e., soil fauna) are important drivers of many key processes in soils including soil aggregate formation, water retention, and soil organic matter transformation. Many soil fauna groups directly or indirectly participate in litter consumption. However, the quantity of litter consumed by major faunal groups across biomes remains unknown. To estimate this quantity, we reviewed > 1000 observations from 70 studies that determined the biomass of soil fauna across various biomes and 200 observations from 44 studies on litter consumption by soil fauna. To compare litter consumption with annual litterfall, we analyzed 692 observations from 24 litterfall studies and 183 observations from 28 litter stock studies. The biomass of faunal groups was highest in temperate grasslands and then decreased in the following order: boreal forest > temperate forest > tropical grassland > tundra > tropical forest > Mediterranean ecosystems > desert and semidesert. Tropical grasslands, desert biomes, and Mediterranean ecosystems were dominated by termites. Temperate grasslands were dominated by omnivores, while temperate forests were dominated by earthworms. On average, estimated litter consumption (relative to total litter input) ranged from a low of 14.9% in deserts to a high of 100.4% in temperate grassland. Litter consumption by soil fauna was greater in grasslands than in forests. This is the first study to estimate the effect of different soil fauna groups on litter consumption and related processes at global scale.

Long-term effects of gasification biochar application on soil functions in a Mediterranean agroecosystem: Higher addition rates sequester more carbon but pose a risk to soil faunal communities.

Biochar applications can have important implications for many of the soil functions upon which agroecosystems rely, particularly regarding organic carbon storage. This study evaluated the impacts of adding a highly aromatic gasification biochar at different rates (0, 12 and 50 t ha-1) to a barley crop on the provision of crucial soil functions (carbon sequestration, water content, greenhouse gas emissions, nutrient cycling, soil food web functioning, and food production). After natural ageing in the field for six years, a wide range of soil properties representative of the studied soil functions were measured and integrated into a soil quality index. Results showed that C sequestration increased with biochar rate (23 and 68% higher than in the control for the 12 and 50 t biochar ha-1 treatments, respectively). Water content was enhanced at the 50 t ha-1 treatment depending on the sampling date. Despite biochar additions neither abating nor increasing CO2 equivalent emissions (carbon dioxide plus nitrous oxide and methane), the system shifted from being a methane sink (-0.017 ± 0.01 mg CH4-C m-2 h-1 at the 12 t ha-1 treatment), to a net source (0.025 ± 0.02 mg CH4-C m-2 h-1 at the 50 t ha-1 treatment). In addition, biochar ageing provoked a loss of nitrate mitigation potential, and indeed ammonium production was stimulated at the 50 t ha-1 rate. The 50 t ha-1 treatment also adversely affected nematode and collembolan functional diversity. Lastly, biochar did not affect barley yield. The results of the soil quality index indicated that no biochar treatment provided more benefits to our agricultural soil, and, although the 50 t ha-1 treatment increased C sequestration, this was potentially offset by its harmful effects on soil faunal communities. Therefore, application of this biochar at high rates should be avoided to prevent risks to soil biological communities.

Amendments with pyrolyzed agrowastes change bromacil and diuron's sorption and persistence in a tropical soil without modifying their environmental risk.

Knowledge of pesticides fate in tropical soils and how it could be affected by pyrolyzed biomass as amendment is limited. Combining conventional and radiotracer methods, as well as risk assessment tools, the effects of several charred agrowastes on the sorption, persistence, and ecological risk of the herbicides bromacil (BMC) and diuron (DRN) were evaluated in a tropical agricultural soil under laboratory conditions. Pineapple stubble (PS), palm oil fiber (PF), and coffee hull (CH) were charred at 300 (torrefied) and 600 °C (biochar) and applied to the soil at 10 and 20 t ha-1 rates. The sorption coefficients (Koc) in unamended soil for BMC and DRN were 18.4 and 212.1 L kg-1, respectively. The addition of torrefied PS and PF caused a 3 to 4-fold increment in BMC sorption and a 3 to 6-fold change in DRN's sorption. The only biochar that affected the sorption was PS that increased DRN's sorption 3.5 times. The application of coffee hull materials had no significant effect. In terms of degradation (half-life, DT50), for unamended soil BMC's degradation (300 days) was limited compared to DRN (73 days). Alternatively, biodegradation (mineralization half-life time, MT50) was 1278 d for BMC and 538 for DRN. While only PF and CH torrefied increased BMC's persistence, all the torrefied affected DRN's persistence. However, despite the observed effects, the predicted ecological risk was not mitigated. Our results highlight the need for scientific evidence on the use of pyrolyzed organic amendments to assess potential benefits and prevent unintended impacts in tropical agroecosystems.

Fresh biochar application provokes a reduction of nitrate which is unexplained by conventional mechanisms.

Soil-applied biochar has been reported to possess the potential to mitigate nitrate leaching and thus, exert beneficial effects beyond carbon sequestration. The main objective of the present study is to confirm if a pine gasification biochar that has proven able to decrease soil-soluble nitrate in previous research can indeed exert such an effect and to determine by which mechanism. For this purpose, lysimeters containing soil-biochar mixtures at 0, 12 and 50 t biochar ha-1 were investigated in two different scenarios: a fresh biochar scenario consisting of fresh biochar and a fallow-managed soil, and an aged biochar scenario with a 6-yr naturally aged biochar in a crop-managed soil. Soil columns were assessed under a mimicked Mediterranean ambient within a greenhouse setting during an 8-mo period which included a barley crop cycle. A set of parameters related to nitrogen cycling, and particularly to mechanisms that could directly or indirectly explain nitrate content reduction (i.e., sorption, leaching, microbially-mediated processes, volatilisation, plant uptake, and ecotoxicological effects), were assessed. Specific measurements included soil solution and leachate ionic composition, microbial biomass and activity, greenhouse gas (GHG) emissions, N and O isotopic composition of nitrate, crop yield and quality, and ecotoxicological endpoints, among others. Nitrate content reduction in soil solution was verified for the fresh biochar scenario in both 12 and 50 t ha-1 treatments and was coupled to a significant reduction of chloride, sodium, calcium and magnesium. This effect was noticed only after eight months of biochar application thus suggesting a time-dependent process. All other mechanisms tested being discarded, the formation of an organo-mineral coating emerges as a plausible explanation for the ionic content decrease.

KEYLINK: towards a more integrative soil representation for inclusion in ecosystem scale models. I. review and model concept.

The relatively poor simulation of the below-ground processes is a severe drawback for many ecosystem models, especially when predicting responses to climate change and management. For a meaningful estimation of ecosystem production and the cycling of water, energy, nutrients and carbon, the integration of soil processes and the exchanges at the surface is crucial. It is increasingly recognized that soil biota play an important role in soil organic carbon and nutrient cycling, shaping soil structure and hydrological properties through their activity, and in water and nutrient uptake by plants through mycorrhizal processes. In this article, we review the main soil biological actors (microbiota, fauna and roots) and their effects on soil functioning. We review to what extent they have been included in soil models and propose which of them could be included in ecosystem models. We show that the model representation of the soil food web, the impact of soil ecosystem engineers on soil structure and the related effects on hydrology and soil organic matter (SOM) stabilization are key issues in improving ecosystem-scale soil representation in models. Finally, we describe a new core model concept (KEYLINK) that integrates insights from SOM models, structural models and food web models to simulate the living soil at an ecosystem scale.

Soil restoration using compost-like-outputs and digestates from non-source-separated urban waste as organic amendments: Limitations and opportunities.

Soil rehabilitation in the context of the restoration of quarries, dumping sites, or road slopes often requires the prior addition of organic amendments to improve the substrates used for Technosol construction. Bio-wastes coming from advanced Mechanical-Biological Treatment Plants, mainly compost-like-outputs (CLO) and digestates (DGT), are new and suitable sources of organic matter potentially useful as organic amendments for this purpose, in an approach clearly fulfilling the principles of circular economy. In order to assess the suitability of these materials, a complete physicochemical and biological evaluation was carried out, including an ecotoxicological evaluation to discard hazardous effects on key soil fauna groups. Field experiments were also carried out on several road slopes and a dumping site. The stability degree of organic matter and the impurities content could be restricting parameters for the use of CLO in soils. Low stability degree decreased plant development in the initial stages of restoration. Moreover, the high heterogeneity in terms of physicochemical parameters of the different CLOs assessed is a serious constraint to making generalizations about its use. In contrast, composition of DGTs was more stable between plants and batches, and presented low impurities and high N contents that make them more suitable for applying to soil and promoting plant development. Regarding the application rates, DGT application at 20 g kg-1 clearly improved plant growth after sowing, without compromising recruitment. However, application at 80 g kg-1 did not ameliorate seed germination and plant growth, in either CLO or DGT treatments, and increased N-leaching and toxicity risk to soil mesofauna in DGT amended Technosols.

Comparison of biochars derived from different types of feedstock and their potential for heavy metal removal in multiple-metal solutions.

Three different types of feedstocks and their biochars were used to remove Cr(III), Cd(II), Cu(II) and Pb(II) ions from a mixture of multiple heavy metals. The effect of the initial concentration of heavy metals in solution has been analysed, and kinetics modelling and a comparison of the adsorption capacity of such materials have been performed to elucidate the possible adsorption mechanisms. The results show that the adsorption capacity is dependent on the type of feedstock and on the pyrolysis conditions. The adsorption capacity of the biomass types is ranked as follows: FO (from sewage sludge)>> LO > ZO (both from agriculture biomass waste)>> CO (from wood biomass waste). Biochars, which are the product of the pyrolysis of feedstocks, clearly improve the adsorption efficiency in the case of those derived from wood and agricultural biomasses. Complexation and cation exchange have been found to be the two main adsorption mechanisms in systems containing multiple heavy metals, with cation exchange being the most significant. The pore structure of biomass/biochar cannot be neglected when investigating the adsorption mechanism of each material. All the disposal biomasses presented here are good alternatives for heavy metal removal from wastewaters.

Nonylphenol causes shifts in microbial communities and nitrogen mineralization in soil microcosms.

The aims of this work was to investigate, in soil microcosms, the effects on soil microbial community structure and function of increasing concentrations of 4-Nonylphenol (NP). The lasts is a product of degradation of NPEOs (Nonylphenol polyethoxylates) with a known toxic and estrogenic capacity able to disrupt animal's hormonal systems. The effect of increasing concentrations of NP (0, 10, 30, 90, and 270 mg NP kg-1 of dry soil) in soil microcosms in three sampling dates (28, 56, and 112 days) over soil microbial activity and function were assessed. Soil microbial activity was estimated by microbial ATP content, and both bacterial and fungal communities composition were estimated using the terminal restriction fragment length polymorphism technique (T-RFLP). Abundance of ammonia-oxidizing bacteria (AOB) was estimated by qPCR of gene encoding for the bacterial ammonia-monoxygenase (amoA). Changes in biologically mediated soil properties were also assessed, namely water-soluble NH+4, NO-2 and NO-3 content, the two last allowing the assessment of mineralization rates. NP-spiking had some unexpected impacts on microbial community structure and functions, since (i) impacted both bacterial and fungal communities structure at the highest NP concentration tested, bacterial communities were resistant to lower concentrations, while fungal communities were increasingly impacted until the end of the incubation at day 112; (ii) no community structure resilience was observed in bacteria at the highest NP concentration nor for fungi at any concentration; (iii) microbial activity decreased with NP after 28 and 56 d, but increased in the last sampling at the highest concentrations tests, coupled to an enrichment in AOB taxa after 56 and 112 days, that at least partly explain also explain the observed speed up of nitrification rates.

Microbial diversity in Chinese temperate steppe: unveiling the most influential environmental drivers.

Temperate steppe is extremely sensitive to the current global changes. However, what are the main environmental variables driving microbial diversity in temperate steppe are still unclear, something that impairs doing predictions about the expected effects of global changes on microbe-mediated ecological functions. This is why, in this study, the relationship between soil microbial diversity and environmental variables in Chinese temperate steppe is investigated. In this study, significant correlations between soil bacterial α-diversity and mean annual precipitation and the aridity index were observed at the whole region scale. No clear correlations between microbial α-diversities and other measured environmental variables were found at the whole temperate steppe region and sub-regions. On the other hand, ß-diversity was strongly related to spatial variables and climate variables for bacteria, while spatial variables and soil organic matters were more related with fungal ß-diversity. In addition, the mean annual temperature was highly correlated with microbial ß-diversity at different spatial scales, suggesting that it could be a good single predictor of soil microbial assemblage in temperate steppe. ß-Diversities are more explained by combined effect of local environmental variables based on variation partitioning analysis, reflecting the community assemblage is more likely driven by species sorting through environmental filtering.

Influence of soil properties on the performance of Folsomia candida: implications for its use in soil ecotoxicology testing.

Nineteen Mediterranean natural soils with a wide range of properties and the Organisation for Economic Co-operation and Development (OECD) artificial soil were used to assess the influence of soil properties on the results of avoidance and reproduction tests carried out with the soil collembolan species Folsomia candida. Compared to natural soils, the OECD soil was mostly rejected by individuals when a natural soil was offered in avoidance tests, and the number of offspring produced was generally lower than the one obtained in natural soils. None of the soil properties assessed showed a significant influence on the avoidance behavior. More precisely, only soil moisture was included in the model explaining the avoidance response (avoidance increased with increasing differences in moisture), but its contribution was marginally not significant. The model derived explained only 16% of the variance in avoidance response. On the contrary, several soil properties significantly influenced reproduction (number of offspring increased with increasing moisture content, increasing coarse texture, and decreasing nitrogen content). In this case, the model explained 45% of the variance in reproduction. These results, together with the fact that most of the selected soils fulfilled the validity criteria in both avoidance and reproduction tests, confirm the literature experience showing that this species is relatively insensitive to soil properties and hence highly suitable to be used in ecotoxicological tests with natural soils. In addition, our study highlights the need for accuracy in soil moisture adjustment in soil ecotoxicological tests with this species. Otherwise, results of both avoidance and reproduction tests might be biased.

Improving ecological risk assessment in the Mediterranean area: selection of reference soils and evaluating the influence of soil properties on avoidance and reproduction of two oligochaete species.

A current challenge in soil ecotoxicology is the use of natural soils as test substrates to increase ecological relevance of data. Despite the existence of six natural reference soils (the Euro-soils), some parallel projects showed that these soils do not accurately represent the diversity of European soils. Particularly, Mediterranean soils are not properly represented. To fill this gap, 12 natural soils from the Mediterranean regions of Alentejo, Portugal; Cataluña, Spain; and Liguria, Italy, were selected and used in reproduction and avoidance tests to evaluate the soil habitat function for earthworms (Eisenia andrei) and enchytraeids (Enchytraeus crypticus). Predictive models on the influence of soil properties on the responses of these organisms were developed using generalized linear models. Results indicate that the selected soils can impact reproduction and avoidance behavior of both Oligochaete species. Reproduction of enchytraeids was affected by different soil properties, but the test validity criteria were fulfilled. The avoidance response of enchytraeids was highly variable, but significant effects of texture and pH were found. Earthworms were more sensitive to soil properties. They did not reproduce successfully in three of the 10 soils, and a positive influence of moisture, fine sand, pH, and organic matter and a negative influence of clay were found. Moreover, they strongly avoided soils with extreme textures. Despite these limitations, most of the selected soils are suitable substrates for ecotoxicological evaluations.

Soil bioassays as tools for sludge compost quality assessment.

Composting is a waste management technology that is becoming more widespread as a response to the increasing production of sewage sludge and the pressure for its reuse in soil. In this study, different bioassays (plant germination, earthworm survival, biomass and reproduction, and collembolan survival and reproduction) were assessed for their usefulness in the compost quality assessment. Compost samples, from two different composting plants, were taken along the composting process, which were characterized and submitted to bioassays (plant germination and collembolan and earthworm performance). Results from our study indicate that the noxious effects of some of the compost samples observed in bioassays are related to the low organic matter stability of composts and the enhanced release of decomposition endproducts, with the exception of earthworms, which are favored. Plant germination and collembolan reproduction inhibition was generally associated with uncomposted sludge, while earthworm total biomass and reproduction were enhanced by these materials. On the other hand, earthworm and collembolan survival were unaffected by the degree of composting of the wastes. However, this pattern was clear in one of the composting procedures assessed, but less in the other, where the release of decomposition endproducts was lower due to its higher stability, indicating the sensitivity and usefulness of bioassays for the quality assessment of composts.

Phytotoxic effects of sewage sludge extracts on the germination of three plant species.

In order to evaluate the ability of three types of extracts to explain the ecotoxicological risk of treated municipal sewage sludges, the OECD 208A germination test was applied using three plants (Lolium perenne L., Brassica rapa L., and Trifolium pratense L.). Three equivalent batches of sludge, remained as dewatered sludge, composted with plant remains and thermally dried, from an anaerobic waste water treatment plant were separated. Samples from these three batches were extracted in water, methanol, and dichloromethane. Plant bioassays were performed and the Germination Index (GI) for the three plants was evaluated once after a period of 10 days. Germination in extracts was always lower than the respective controls. The germination in composted sludge (GI 40.9-86.2) was higher than the dewatered (GI 2.9-45.8), or thermally dried sludges (GI 24.6-64.4). A comparison of the germination between types of extracts showed differences for dewatered sludge with the three plants, where the water and methanol extracts had significantly lower germination than the dichloromethane extract. A higher half maximal effective concentration (EC50) in composted extracts was established, mainly in the water extract (EC50 431-490 g kg(-1)). On the contrary, the germination was strongly inhibited in the water extract of the dewatered sludge (EC50 14 g kg(-1)). The germination was positively correlated with the degree of organic matter stability of the parent sludge, and an inverse correlation was detected for total nitrogen, hydrolysable nitrogen and ammonium content. It is concluded that the phytotoxic effect of the water extract is more closely related to hydrophilic substances rather than lipophilic ones, and care must be taken with dewatered sludge application, especially with their aqueous eluates. Results obtained in this work show the suitability of the use of sludge extracts in ecotoxic assays and emphasize the relevance of sewage sludge stabilization by post-treatment processes.

Ecological risk assessment of organic waste amendments using the species sensitivity distribution from a soil organisms test battery.

Safe amendment rates (the predicted no-effect concentration or PNEC) of seven organic wastes were estimated from the species sensitivity distribution of a battery of soil biota tests and compared with different realistic amendment scenarios (different predicted environmental concentrations or PEC). None of the wastes was expected to exert noxious effects on soil biota if applied according either to the usual maximum amendment rates in Europe or phosphorus demands of crops (below 2 tonnes DM ha(-1)). However, some of the wastes might be problematic if applied according to nitrogen demands of crops (above 2 tonnes DM ha(-1)). Ammonium content and organic matter stability of the studied wastes are the most influential determinants of the maximum amendment rates derived in this study, but not pollutant burden. This finding indicates the need to stabilize wastes prior to their reuse in soils in order to avoid short-term impacts on soil communities.

Comparison of solid-phase and eluate assays to gauge the ecotoxicological risk of organic wastes on soil organisms.

Development of methodologies to assess the safety of reusing polluted organic wastes in soil is a priority in Europe. In this study, and coupled with chemical analysis, seven organic wastes were subjected to different aquatic and soil bioassays. Tests were carried out with solid-phase waste and three different waste eluates (water, methanol, and dichloromethane). Solid-phase assays were indicated as the most suitable for waste testing not only in terms of relevance for real situations, but also because toxicity in eluates was generally not representative of the chronic effects in solid-phase. No general correlations were found between toxicity and waste pollutant burden, neither in solid-phase nor in eluate assays, showing the inability of chemical methods to predict the ecotoxicological risks of wastes. On the contrary, several physicochemical parameters reflecting the degree of low organic matter stability in wastes were the main contributors to the acute toxicity seen in collembolans and daphnids.

Feeding inhibition in the soil collembolan Folsomia candida as an endpoint for the estimation of organic waste ecotoxicity.

Despite the increasing quantities of organic wastes that are being reused in soils, there are few studies that focus on the selection of bioassays for the ecotoxicological risk assessment of organic wastes to soils. In the present study, differences in feeding inhibition in the soil collembolan Folsomia candida were evaluated as an ecotoxicological endpoint for the assessment of risk to soils amended with polluted organic wastes. Seven organic wastes (dewatered sewage sludges, thermally dried sewage sludges, composted sewage sludges, and a thermally dried pig slurry) were tested. These wastes had different origins, treatments, and pollutant burdens, and were selected as a representative sample of the wide variety of wastes currently generated. A clear dose response was observed for this parameter, with an increase in percentage of individual feeding inhibition with increased doses of organic wastes. More significantly, feeding inhibition correlated highly with mortality and reproduction inhibition in the different wastes. Composted sludges displayed the lowest toxicity, followed by thermally dried sludge and dewatered sludge. Thermally dried pig slurry showed the highest toxicity for feeding, with lower median effective concentration (EC50) values than the lowest dose tested. Among waste physicochemical parameters and pollutants, low organic matter stability appeared to be the main predictor of potential adverse effects on soil fauna, because it correlated significantly with feeding inhibition and mortality. Furthermore, feeding inhibition tests were run over a short exposure time (less than 7 d), which, together with the results obtained, makes this bioassay a good screening tool for organic waste toxicity.

Ecotoxicological and fertilizing effects of dewatered, composted and dry sewage sludge on soil mesofauna: a TME experiment.

The effects of dewatered, composted and dry urban sewage sludge on the soil mesofauna were tested in mesocosms. PVC containers were filled with soil/sludge mixtures in a proportion to amount to 6% organic matter content and were colonized with soil fauna coming from undisturbed forest soils. Mesocosms were incubated under laboratory conditions for 7, 30, 60, 120 and 180 days, after which fauna was extracted in Berlese funnels. The animals were classified at different taxonomic levels. Acari were classified to the suborder level for Astigmata, to the family level for Mesostigmata and Prostigmata and to the species level for Cryptostigmata. Acute- and medium-term effects were determined on the faunal density, relative abundance of the main taxa and community structure. Prostigmata were sensitive to the acute effect of the sludge, whereas Mesostigmata and particularly Cryptostigmata were sensitive to its medium-term effect. The most negative effects were found for dry sludge, which caused acute and medium-term effects on the invertebrate communities and on the soil trophic structure.