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1.
Mar Genomics ; 74: 101097, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38485291

RESUMO

Historically famous for their negative impact on human-built marine wood structures, mollusc shipworms play a central ecological role in marine ecosystems. Their association with bacterial symbionts, providing cellulolytic and nitrogen-fixing activities, underscores their exceptional wood-eating and wood-boring behaviours, improving energy transfer and the recycling of essential nutrients locked in the wood cellulose. Importantly, from a molecular standpoint, a minute of omic resources are available from this lineage of Bivalvia. Here, we produced and assembled a transcriptome from the globally distributed naval shipworm, Teredo navalis (family Teredinidae). The transcriptome was obtained by sequencing the total RNA from five equidistant segments of the whole body of a T. navalis specimen. The quality of the produced assembly was accessed with several statistics, revealing a highly contiguous (1194 N50) and complete (over 90% BUSCO scores for Eukaryote and Metazoan databases) transcriptome, with nearly 38,000 predicted ORF, more than half being functionally annotated. Our findings pave the way to investigate the unique evolutionary biology of these highly modified bivalves and lay the foundation for an adequate gene annotation of a full genome sequence of the species.


Assuntos
Bivalves , Ecossistema , Humanos , Animais , Transcriptoma , Bivalves/genética , Evolução Biológica , Madeira , Anotação de Sequência Molecular
2.
Mar Genomics ; 74: 101084, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38485292

RESUMO

The Annelida phylum is composed of a myriad of species exhibiting key phenotypic adaptations. They occupy key ecological niches in a variety of marine, freshwater and terrestrial ecosystems. Importantly, the increment of omic resources is rapidly modifying the taxonomic landscape and knowledge of species belonging to this phylum. Here, we comprehensively characterised and annotated a transcriptome of the common ragworm, Hediste diversicolor (OF Müller). This species belongs to the family Nereididae and inhabits estuarine and lagoon areas on the Atlantic coasts of Europe and North America. Ecologically, H. diversicolor plays an important role in benthic food webs. Given its commercial value, H. diversicolor is a promising candidate for aquaculture development and production in farming facilities, under a circular economy framework. We used Illumina next-generation sequencing technology, to produce a total of 105 million (M) paired-end (PE) raw reads and generate the first whole-body transcriptome assembly of H. diversicolor species. This high-quality transcriptome contains 69,335 transcripts with an N50 transcript length of 2313 bp and achieved a BUSCO gene completeness of 97.7% and 96% in Eukaryota and Metazoa lineage-specific profile libraries. Our findings offer a valuable resource for multiple biological applications using this species.


Assuntos
Ecossistema , Poliquetos , Animais , Transcriptoma , Poliquetos/genética , Aquicultura , Europa (Continente)
3.
GigaByte ; 2022: gigabyte40, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36824513

RESUMO

The Atlantic chub mackerel, Scomber colias (Gmelin, 1789), is a medium-sized pelagic fish with substantial importance in the fisheries of the Atlantic Ocean and the Mediterranean Sea. Over the past decade, this species has gained special relevance, being one of the main targets of pelagic fisheries in the NE Atlantic. Here, we sequenced and annotated the first high-quality draft genome assembly of S. colias, produced with PacBio HiFi long reads and Illumina paired-end short reads. The estimated genome size is 814 Mbp, distributed into 2,028 scaffolds and 2,093 contigs with an N50 length of 4.19 and 3.34 Mbp, respectively. We annotated 27,675 protein-coding genes and the BUSCO analyses indicated high completeness, with 97.3% of the single-copy orthologs in the Actinopterygii library profile. The present genome assembly represents a valuable resource to address the biology and management of this relevant fishery. Finally, this genome assembly ranks fourth in high-quality genome assemblies within the order Scombriformes and first in the genus Scomber.

4.
J Vet Diagn Invest ; 24(1): 148-52, 2012 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22362946

RESUMO

Human pathogens have evolved to infect vertebrate hosts other than human beings without causing symptoms of the disease, thus permitting them to complete their life cycle and to develop into infectious forms. The identification and management of infected animals are alternatives to control dissemination of the disease and to prevent human illness. In the current study, the potential use of staphylococcal A or streptococcal G proteins was evaluated with enzyme-linked immunosorbent assays (ELISAs) for seroepidemiological studies. Sera were collected from animals that were representative of 23 different Brazilian wild mammals. A high protein A binding rate was observed in all animals, except for the orders Didelphimorphia, Artiodactyla, and Rodentia, in which affinity was medium or low. Affinity for streptococcal G protein was higher in animals of the order Artiodactyla, whereas no streptococcal G protein binding was observed in samples obtained from felines (order Carnivora). Bacterial protein binding to mammalian immunoglobulins was confirmed by immunoblotting. The results suggest that secondary detection systems should be better investigated in ELISA protocols before their implementation in seroepidemiological studies involving wild mammals.


Assuntos
Animais Selvagens/microbiologia , Imunoglobulinas/imunologia , Staphylococcus/imunologia , Streptococcus/imunologia , Animais , Animais Selvagens/imunologia , Artiodáctilos/imunologia , Artiodáctilos/microbiologia , Proteínas de Bactérias/imunologia , Brasil , Carnívoros/imunologia , Carnívoros/microbiologia , Ensaio de Imunoadsorção Enzimática/métodos , Ensaio de Imunoadsorção Enzimática/veterinária , Immunoblotting/veterinária , Roedores/imunologia , Roedores/microbiologia
5.
Mycopathologia ; 169(3): 159-65, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19768574

RESUMO

There is some evidence that dogs can be naturally infected by Paracoccidioides brasiliensis in endemic areas of paracoccidioidomycosis. In order to evaluate canine infection with this fungus, a survey with 149 urban and 126 rural dogs was carried out using ELISA and intradermal tests with the gp43 antigen of P. brasiliensis in Uberaba, Minas Gerais state of Brazil. Forty-one out of 149 urban dogs were euthanatized and had their lungs, liver and spleen removed. One slice from each viscera was processed for histopathological examination and the remaining was homogenized and then cultivated on mycobiotic agar at room temperature and Fava-Netto medium at 35 degrees C and observed for 12 weeks. Of urban dogs, 75 (50.3%) were small adult females, 56 (36%) were strays, while 93 (64%) had been donated to the municipal zoonosis control center. Nine (6.2%) had a positive intradermal test without statistical differences regarding gender, race, nutritional status or origin. No colonies with microscopic or morphology appearances resembling P. brasiliensis were isolated, nor granulomatous process or fungal structures were observed from histopathological examination. Eighty (53.6%) of the urban dogs presented seroreactivity, without statistical differences regarding gender, race, nutritional state, origin, or positive intradermal test. Of 126 rural dogs, 102 (80.5%) presented antibodies against gp43 antigen, and this was statistically significant in relation to the reactivity detected in urban dogs (P = 0.0001). Thus, dogs are commonly infected with P. brasiliensis, but they probably present natural resistance to develop paracoccidioidomycosis.


Assuntos
Anticorpos Antifúngicos/sangue , Doenças do Cão/epidemiologia , Paracoccidioides/imunologia , Paracoccidioidomicose/veterinária , Animais , Antígenos de Fungos , Brasil/epidemiologia , Doenças do Cão/microbiologia , Cães , Ensaio de Imunoadsorção Enzimática , Feminino , Histocitoquímica , Fígado/microbiologia , Fígado/patologia , Pulmão/microbiologia , Pulmão/patologia , Masculino , Microscopia , Paracoccidioidomicose/epidemiologia , Estudos Soroepidemiológicos , Testes Cutâneos , Baço/microbiologia , Baço/patologia
6.
Fisioter. Bras ; 9(1): 43-48, jan.-fev. 2008.
Artigo em Português | LILACS | ID: lil-491110

RESUMO

A patela tem como uma das funções, aumentar o braço de alavanca e o trabalho biomecânico do quadríceps. Alterações no alinhamento patelofemoral são fatores que propiciam mudanças na estrutura da cartilagem articular do joelho, levando a um quadro de condromalácia. A proposta deste artigo de revisão é investigar os efeitos da fisioterapia no monitoramento de praticantes de atividades físicas, visando à diminuição dos riscos de lesão na cartilagem articular do joelho; analisar os efeitos do trabalho de força muscular para prevenir ou diminuir o desgaste cartilaginoso; e enfatizar a fisioterapia preventiva no desempenho do atleta durante sua vida profissional.


The patella’s function is to increase the level arm and the biomechanical work of the quadriceps muscle. Alterations in the patellofemoral alignment are factors that provide changes in the knee articular cartilage structure, leading to a chondromalacia condition. The purpose of this literature review is to investigate the effect of physical therapy in the athlete’s preparation, aiming at reducing the risks of knee articular cartilage injury; to analyze the effect of muscle strength in order to prevent or decrease the articular cartilage and; to target the effect of preventive physical therapy in improving athletes’ performance during their professional life.


Assuntos
Cartilagem , Condromalacia da Patela , Terapia por Exercício , Modalidades de Fisioterapia , Ferimentos e Lesões , Músculo Quadríceps
8.
Rev. Soc. Bras. Med. Trop ; 40(1): 25-28, jan.-fev. 2007. tab, graf
Artigo em Português | LILACS | ID: lil-449164

RESUMO

O Triatoma sordida é o mais freqüente vetor do Trypanosoma cruzi, Chagas, 1909, em Uberaba, MG. O objetivo deste trabalho foi construir uma tabela de vida dinâmica para o Triatoma sordida visando fornecer dados para subsidiar o controle de suas populações.


Triatoma sordida is the most frequent vector for Trypanosoma cruzi, Chagas, 1909, in Uberaba, State of Minas Gerais. The objective of this study was to construct a dynamic life table for Triatoma sordida with the aim of supplying support data for controlling its populations.


Assuntos
Animais , Masculino , Feminino , Insetos Vetores/fisiologia , Tábuas de Vida , Triatoma/fisiologia , Doença de Chagas/transmissão , Fertilidade/fisiologia , Dinâmica Populacional
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