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1.
J Hazard Mater ; 469: 133945, 2024 May 05.
Artigo em Inglês | MEDLINE | ID: mdl-38447372

RESUMO

Porous fabrics have a significant impact on indoor air quality by adsorbing and emitting chemical substances, such as volatile organic compounds (VOCs) and semi-volatile organic compounds (SVOCs). Understanding the partition behavior between organic compound molecules and indoor fabrics is crucial for assessing their environmental fate and associated human exposure. The physicochemical properties of fabrics and compounds are fundamental in determining the free energy of partitioning. Moreover, environmental factors like temperature and humidity critically affect the partition process by modifying the thermal and moisture conditions of the fabric. However, existing methods for determining the fabric-air partition coefficient are limited to specific fabric-chemical combinations and lack a comprehensive consideration of indoor environmental factors. In this study, large amounts of experimental data on fabric-air partition coefficients (Kfa) of (S)VOCs were collected for silk, polyester, and cotton fabrics. Key molecular descriptors were identified, integrating the influences of physicochemical properties, temperature, and humidity. Subsequently, two typical quantitative structure-property relationship (QSPR) models were developed to correlate the Kfa values with the molecular descriptors. The fitting performance, robustness, and predictive ability of the two QSPR models were evaluated through statistical analysis and internal/external validation. This research provides insights for the high-throughput prediction of the environmental behaviors of indoor organic compounds.

2.
Sci Total Environ ; 864: 161189, 2023 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-36584952

RESUMO

Understanding the coupling mechanism between multi-material pollution sources and sinks is key to predicting the pollution load. Indoor fabric materials strongly adsorb volatile organic compounds (VOCs) owing to their high loading rates and large specific surface areas. The secondary source effects generated by their desorption easily aggravates indoor air pollution and prolongs the pollution period. The existing research conclusions on the VOC mass-transfer properties of building materials are difficult to apply directly to fabrics due to their multilayered anisotropic fiber-interlaced structure. In this study, the triple porous structure of the fabrics was characterized, and the mass-transfer network were analyzed. Moreover, a multistage fractal-like tree network model was proposed to characterize the fabric's pore structure and establish a theoretical prediction model of the VOC diffusion coefficient. Subsequently, the mass-transfer characteristic parameters of the fabrics were measured at different ambient temperatures through loading and emission experiments of formaldehyde, benzene, toluene, ethylbenzene, and xylene (BTEX) on typical indoor fabrics. A comparison of the experimentally determined and theoretically predicted values revealed that the proposed model could accurately predict the diffusion coefficient of fabrics. This study can help understand the dynamic source and sink characteristics of fabrics in an indoor environment.

3.
Chem Res Toxicol ; 35(11): 2145-2151, 2022 11 21.
Artigo em Inglês | MEDLINE | ID: mdl-36269594

RESUMO

Arsenic is a widespread environmental contaminant, and long-term exposure to arsenic in drinking water is known to be associated with the development of many human diseases. Identification of arsenic-binding proteins is important for understanding the mechanisms underlying the toxic effects of arsenic species. Here, we developed a chemoproteomic strategy, relying on the use of a biotin-As(III) probe, stable isotope labeling by amino acids in cell culture, and liquid chromatography-tandem mass spectrometry analysis, to identify quantitatively As(III)-binding proteins. Over 400 proteins were enriched from the lysate of HEK293T cells with streptavidin beads immobilized with the biotin-As(III) probe. Competitive labeling experiments in the presence or absence of p-aminophenylarsenoxide (PAPAO) revealed 51 candidate As(III)-binding proteins, including several molecular chaperones and cochaperones, that is, HSPA4, HSPA4L, HSPH1, HOP1, FKBP51, and FKBP52. We also validated, by employing western blot analysis, the ability of HSPA4, a member of heat shock protein 70 (HSP70) family, in binding with PAPAO and sodium arsenite in vitro. Together, our work led to the identification of a number of new As(III)-interaction proteins, and our results suggest that As(III) may perturb proteostasis partly through binding directly with molecular chaperones.


Assuntos
Arsênio , Proteínas de Transporte , Humanos , Proteínas de Transporte/metabolismo , Arsênio/metabolismo , Biotina/química , Células HEK293 , Chaperonas Moleculares
4.
J Immunol Res ; 2022: 1786395, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35450395

RESUMO

Adoptive allogeneic natural killer (NK) cell therapy has shown promise in treating castration-resistant prostate cancer (CRPC), which is the terminal stage of prostate cancer (PCa) and incurable. Thus, we employed an efficient manufacturing method for the large-scale ex vivo expansion of high-quality NK cells from peripheral blood of healthy donors. In the present study, we evaluated the in vitro cytotoxicity of NK cells against human PCa cell lines and in vivo antitumor activity in a preclinical mouse model of CRPC. CCK-8 results demonstrated that the NK cells exerted potent cytotoxicity against all PCa cell lines in vitro. The NK cells were activated when cocultured with PCa C4-2 cells, evidenced by upregulation of the degranulation marker CD107a and secretion of cytokines (TNF-α and IFN-γ). In a xenograft mouse model of CRPC, the caliper, CT, and ultrasonography examination results showed that the size of tumors treated with NK cells was significantly smaller than that in the control group. Moreover, ultrasonography examination also indicated that the NK cell treatment evidently reduced the blood supply of the tumors and HE staining results demonstrated that the NK treatment increased the proportion of necrosis in the tumor specimen compared to PBS treatment. Meanwhile, the NK cell treatment did not cause significant serum IL-6 elevation. Therefore, our study suggested that the expanded NK cells exhibited significant cytotoxicity against PCa cell lines in vitro and excellent therapeutic efficacy against CRPC in a xenograft mouse model, which was of great value for the clinical treatment of CRPC.


Assuntos
Transplante de Células-Tronco Hematopoéticas , Neoplasias de Próstata Resistentes à Castração , Animais , Linhagem Celular Tumoral , Citotoxicidade Imunológica , Humanos , Células Matadoras Naturais/metabolismo , Masculino , Camundongos , Neoplasias de Próstata Resistentes à Castração/terapia
5.
J Immunother Cancer ; 9(10)2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34599021

RESUMO

BACKGROUND: Triple negative breast cancer (TNBC) is a subtype of breast cancers with poor prognosis and targeted drug therapies are limited. To develop novel and efficacious therapies for TNBC, we developed a bispecific antibody F7AK3 that recognizes both trophoblast cell surface antigen 2 (TROP2) and CD3 and evaluated its antitumor activities both in vitro and in vivo. METHODS: The binding affinities of F7AK3 to the two targets, TROP2 and CD3, were evaluated by surface plasmon resonance. Binding of F7AK3 to TNBC cells and T cells were evaluated by flow cytometry. Immunofluorescent staining was performed to demonstrate the interactions between T cells with TNBC cells. The cytotoxicity of T cells against TNBC cell lines and primary tumor cells mediated by F7AK3 were determined in vitro. In vivo antitumor activity of F7AK3 was investigated in a xenograft TNBC tumor model, using immunodeficient mice that were reconstituted with human peripheral blood mononuclear cells. RESULTS: We demonstrated that F7AK3 binds specifically to human TROP2 and CD3 antigens, as well as TNBC cell lines and primary tumor cells. Human T cells can only be activated by F7AK3 in the presence of target tumor cells. F7AK3 recruits T cells to TROP2+ tumor cells in vitro and into tumor tissues in vivo. Antitumor growth activity of F7AK3 is observed in a xenograft TNBC tumor model. CONCLUSION: This study showed the antitumor potential of an anti-TROP2xCD3 bispecific antibody F7AK3 to TNBC tumor cells both in vitro and in vivo. These data demonstrate that F7AK3 has the potential to treat TNBC patients, which warrants further preclinical and clinical evaluation of the F7AK3 in advanced or metastatic TNBC patients.


Assuntos
Anticorpos Biespecíficos/uso terapêutico , Imunoterapia/métodos , Neoplasias de Mama Triplo Negativas/tratamento farmacológico , Microambiente Tumoral/imunologia , Animais , Anticorpos Biespecíficos/farmacologia , Linhagem Celular Tumoral , Modelos Animais de Doenças , Feminino , Humanos , Camundongos , Neoplasias de Mama Triplo Negativas/patologia
6.
Anal Chem ; 93(39): 13251-13259, 2021 10 05.
Artigo em Inglês | MEDLINE | ID: mdl-34549933

RESUMO

Kinases catalyze the transfer of the γ-phosphate group from adenosine triphosphate (ATP) to their protein and small-molecule substrates, and this phosphorylation is a crucial element of multiple cell signaling pathways. Herein, we employed isotope-coded ATP acyl-phosphate probes, in conjunction with a multiple-reaction monitoring (MRM)-based targeted proteomic method for proteome-wide identifications of endogenous kinases that can bind to two N6-modified ATP derivatives, N6-methyl-ATP (N6-Me-ATP), and N6-furfuryl-ATP (a.k.a. kinetin triphosphate, KTP). We found that, among the ∼300 quantified kinases, 27 and 18 are candidate kinases that can bind to KTP and N6-Me-ATP, respectively. Additionally, GSK3α and GSK3ß are among the kinases that can bind to both ATP analogues. Moreover, the in vitro biochemical assay showed that GSK3ß could employ N6-Me-ATP but not KTP as the phosphate group donor to phosphorylate its substrate peptide. Molecular modeling studies provided insights into the differences between N6-Me-ATP and KTP in enabling the GSK3ß-mediated phosphorylation. Together, our chemoproteomic approach led to the identification of endogenous kinases that can potentially be targeted by the two ATP analogues. The approach should be generally applicable for assessing endogenous kinases targeted by other ATP and purine analogues.


Assuntos
Trifosfato de Adenosina , Proteoma , Proteômica
7.
Anal Chem ; 93(27): 9634-9639, 2021 07 13.
Artigo em Inglês | MEDLINE | ID: mdl-34185510

RESUMO

Poly- and perfluoroalkyl substances (PFASs) are widely used in industrial products and consumer goods. Due to their extremely recalcitrant nature and potential bioaccumulation and toxicity, exposure to PFASs may result in adverse health outcomes in humans and wildlife. In this study, we developed a chemoproteomic strategy, based on the use of isotope-coded desthiobiotin-perfluorooctanephosphonic acid (PFOPA) probe and liquid chromatography with tandem mass spectrometry (LC-MS/MS) analysis, to profile PFAS-binding proteins. Targeted proteins were labeled with the desthiobiotin-PFOPA probe, digested with trypsin, and the ensuing desthiobiotin-conjugated peptides were enriched with streptavidin beads for LC-MS/MS analysis. We were able to identify 469 putative PFOPA-binding proteins. By conducting competitive binding experiments using low (10 µM) and high (100 µM) concentrations of stable isotope-labeled PFOPA probes, we further identified 128 nonredundant peptides derived from 75 unique proteins that exhibit selective binding toward PFOPA. Additionally, we demonstrated that one of these proteins, fatty acid-binding protein 5 (FABP5), could interact directly with PFASs, including perfluorooctanoic acid (PFOA), perfluorooctanesulfonic acid (PFOS), perfluorohexanesulfonic acid (PFHxS), and perfluorobutanesulfonic acid (PFBS). Furthermore, desthiobiotin-labeled lysine residues are located close to the fatty acid-binding pocket of FABP5, and the binding affinity varies with the structures of PFASs. Taken together, we developed a novel chemoproteomic method for interrogating the PFAS-interacting proteome. The identification of these proteins sets the stage for understanding the mechanisms through which exposure to PFASs confers adverse human health effects.


Assuntos
Ácidos Alcanossulfônicos , Fluorocarbonos , Proteoma , Cromatografia Líquida , Poluentes Ambientais , Proteínas de Ligação a Ácido Graxo , Humanos , Espectrometria de Massas em Tandem
8.
J Hazard Mater ; 416: 125827, 2021 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-33878652

RESUMO

Fabrics are widely distributed in residential buildings. Due to their highly porous structures and large specific surface areas, they have strong adsorption properties for volatile organic compounds (VOCs). The secondary source effect that is induced by their desorption can aggravate indoor air pollution and prolong the pollution period. The partition coefficient, which is a characteristic parameter of VOC mass transfer, is sensitive to variations in environmental parameters. However, due to the inherent differences between fabrics and other indoor porous building materials, the relevant research conclusions on the VOC mass transfer parameters of building materials cannot be applied. In addition, the effects of temperature and humidity on the partitioning behavior of VOCs on fabrics have rarely been quantitatively analyzed. Based on an analysis of the porous structure and corresponding mass transfer process of fabrics, a novel prediction model of the fabric partition coefficient under the coupling effect of temperature and humidity is proposed. Three types of indoor typical fabrics and primary water-soluble VOC (formaldehyde) and water-insoluble VOC (benzene, toluene) are examined experimentally via hygroscopicity tests and environmental chamber tests. The experimental results demonstrate the reliability of the proposed model for a variety of conditions.


Assuntos
Poluentes Atmosféricos , Poluição do Ar em Ambientes Fechados , Compostos Orgânicos Voláteis , Poluentes Atmosféricos/análise , Poluição do Ar em Ambientes Fechados/análise , Benzeno , Monitoramento Ambiental , Formaldeído/análise , Umidade , Reprodutibilidade dos Testes , Temperatura , Tolueno , Compostos Orgânicos Voláteis/análise
9.
BMC Cancer ; 20(1): 740, 2020 Aug 08.
Artigo em Inglês | MEDLINE | ID: mdl-32770988

RESUMO

BACKGROUND: Precision oncology pharmacotherapy relies on precise patient-specific alterations that impact drug responses. Due to rapid advances in clinical tumor sequencing, an urgent need exists for a clinical support tool that automatically interprets sequencing results based on a structured knowledge base of alteration events associated with clinical implications. RESULTS: Here, we introduced the Oncology Pharmacotherapy Decision Support System (OncoPDSS), a web server that systematically annotates the effects of alterations on drug responses. The platform integrates actionable evidence from several well-known resources, distills drug indications from anti-cancer drug labels, and extracts cancer clinical trial data from the ClinicalTrials.gov database. A therapy-centric classification strategy was used to identify potentially effective and non-effective pharmacotherapies from user-uploaded alterations of multi-omics based on integrative evidence. For each potentially effective therapy, clinical trials with faculty information were listed to help patients and their health care providers find the most suitable one. CONCLUSIONS: OncoPDSS can serve as both an integrative knowledge base on cancer precision medicine, as well as a clinical decision support system for cancer researchers and clinical oncologists. It receives multi-omics alterations as input and interprets them into pharmacotherapy-centered information, thus helping clinicians to make clinical pharmacotherapy decisions. The OncoPDSS web server is freely accessible at https://oncopdss.capitalbiobigdata.com .


Assuntos
Bases de Dados Factuais , Sistemas de Apoio a Decisões Clínicas , Neoplasias/tratamento farmacológico , Neoplasias/genética , Medicina de Precisão , Navegador , Antineoplásicos/uso terapêutico , Ensaios Clínicos como Assunto , Humanos , Anotação de Sequência Molecular , Interface Usuário-Computador
10.
Anal Chem ; 92(12): 8031-8036, 2020 06 16.
Artigo em Inglês | MEDLINE | ID: mdl-32420730

RESUMO

Isoprenoid pyrophosphates are involved in protein prenylation and assume regulatory roles in cells; however, little is known about the cellular proteins that can interact with isoprenoid pyrophosphates. Here, we devised a chemical proteomic strategy, capitalizing on the use of a desthiobiotin-geranyl pyrophosphate (GPP) acyl phosphate probe for the enrichment and subsequent identification of GPP-binding proteins using liquid chromatography-tandem mass spectrometry (LC-MS/MS). By combining stable isotope labeling by amino acids in cell culture (SILAC) and competitive labeling with low vs high concentrations of GPP probe, with ATP vs GPP acyl phosphate probes, or with the GPP probe in the presence of different concentrations of free GPP, we uncovered a number of candidate GPP-binding proteins. We also discovered, for the first time, histone deacetylase 1 (HDAC1) as a GPP-binding protein. Furthermore, we found that the enzymatic activity of HDAC1 could be modulated by isoprenoid pyrophosphates. Together, we developed a novel chemical proteomic method for the proteome-wide discovery of GPP-binding proteins, which sets the stage for a better understanding about the biological functions of isoprenoids.


Assuntos
Biotina/análogos & derivados , Histona Desacetilase 1/química , Fosfatos de Poli-Isoprenil/química , Proteômica , Biotina/química , Histona Desacetilase 1/metabolismo , Humanos , Estrutura Molecular
11.
Anal Chem ; 91(24): 15365-15369, 2019 12 17.
Artigo em Inglês | MEDLINE | ID: mdl-31765128

RESUMO

Lysophosphatidic acid (LPA) is an endogenous cell signaling molecule, and dysregulation of LPA signaling pathways is accompanied by several types of cancer. Herein, we developed a chemical proteomic method for the proteome-wide identification of LPA-binding proteins. The method involves the synthesis of a desthiobiotin-conjugated LPA acyl phosphate probe for the covalent labeling, enrichment, and subsequent LC-MS/MS identification of LPA-binding proteins at the proteome-wide level. By conducting labeling reactions at two different probe concentrations (10 and 100 µM) in conjunction with an SILAC (stable isotope labeling by amino acids in cell culture)-based workflow, we characterized the LPA-binding capabilities of these proteins at the entire proteome scale, which led to the identification of 86 candidate LPA-binding proteins in HEK293T cells. Moreover, we validated that two of these proteins, annexin A5 and phosphoglycerate kinase 1, can bind directly with LPA. Together, we developed a novel LPA probe for the identification and characterizations of LPA-binding proteins from the entire human proteome. The method should be adaptable for the identification of other lipid-binding proteins.


Assuntos
Lisofosfolipídeos/química , Proteômica , Extratos Celulares , Células HEK293 , Humanos , Modelos Moleculares , Estrutura Molecular , Ligação Proteica , Conformação Proteica
12.
Int Immunol ; 31(12): 759-770, 2019 11 08.
Artigo em Inglês | MEDLINE | ID: mdl-31169885

RESUMO

Antibody production results from B-cell activation and proliferation upon antigen binding. Discs large homolog 1 (Dlg1), a scaffold protein from the membrane-associated guanylate kinase family, has been shown to regulate the antigen receptor signaling and cell polarity in lymphocytes; however, the physiological function of Dlg1 in humoral responses is not completely clear. Here, we addressed this question using a conditional knockout (KO) mouse model with Dlg1 deficiency in different B-cell subsets by crossing dlg1fl/fl mice with either mb1cre/+ or aicdacre/+ mice, respectively. In both mouse models, we observed that Dlg1 deficiency in B cells (Dlg1-KO B cells) led to obvious hyper-antibody responses upon immunization, the effect of which was more obvious in antigen-recall responses. Mechanistically, we found that Dlg1-KO B cells exhibited hyper-proliferation compared with wild-type B cells upon antigen stimulation, suggesting that the hyper-antibody responses are likely induced by the hyper-proliferation of Dlg1-KO B cells. Indeed, further studies demonstrated that Dlg1 deficiency in B cells led to the down-regulation of a tumor suppressor, FoxO1. Thus, all these results reveal an unexpected function of Dlg1 in restraining hyper-antibody responses through the inhibition of FoxO1 and thus antigen-binding-induced proliferation in B cells.


Assuntos
Formação de Anticorpos/imunologia , Linfócitos B/citologia , Linfócitos B/imunologia , Proteína 1 Homóloga a Discs-Large/imunologia , Animais , Proliferação de Células , Proteína 1 Homóloga a Discs-Large/deficiência , Proteína Forkhead Box O1/antagonistas & inibidores , Proteína Forkhead Box O1/imunologia , Camundongos , Camundongos Knockout
13.
J Immunol ; 202(11): 3187-3197, 2019 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-31028120

RESUMO

Dendritic cells (DCs) play key roles in Ab responses by presenting Ags to lymphocytes and by producing proinflammatory cytokines. In this study, we reported that DC-specific knockout of discs large homologue 1 (Dlg1) resulted in a significantly reduced capacity to mediate Ab responses to both thymus-independent and thymus-dependent Ags in Dlg1 fl/flCd11c-Cre-GFP mice. Mechanistically, Dlg1-deficient DCs showed severely impaired endocytosis and phagocytosis capacities upon Ag exposure. In parallel, loss of Dlg1 significantly jeopardized the proinflammatory cytokine production by DCs upon TLR stimulation. Thus, Dlg1-deficient DCs lost their functions to support innate and adaptive immunities. At a cellular level, Dlg1 exhibited an indispensable function to maintain membrane potential changes by securing potassium ion (K+) efflux and subsequent calcium ion (Ca2+) influx events in DCs upon stimulation, both of which are known to be required for proper function of DCs. At a molecular level, Dlg1 did so by retaining the integrity of voltage-gated K+ channels (including Kv1.3) in DCs. The loss of Dlg1 led to a decreased expression of K+ channels, resulting in impaired membrane potential changes and, as a consequence, reduced proinflammatory cytokine production, compromised Ag endocytosis, and phagocytosis. In conclusion, this study provided, to our knowledge, a novel insight into Dlg1 and the voltage-gated K+ channels axis in DC functions.


Assuntos
Células Dendríticas/imunologia , Proteína 1 Homóloga a Discs-Large/metabolismo , Canais de Potássio de Abertura Dependente da Tensão da Membrana/metabolismo , Animais , Formação de Anticorpos/genética , Apresentação de Antígeno , Sinalização do Cálcio , Células Cultivadas , Citocinas/metabolismo , Proteína 1 Homóloga a Discs-Large/genética , Endocitose/genética , Regulação da Expressão Gênica , Potenciais da Membrana , Camundongos , Camundongos Endogâmicos C57BL , Camundongos Knockout , Canais de Potássio de Abertura Dependente da Tensão da Membrana/genética
14.
J Immunol ; 199(9): 3063-3073, 2017 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-28972092

RESUMO

Unlike conventional B cells, regulatory B cells exhibit immunosuppressive functions to downregulate inflammation via IL-10 production. However, the molecular mechanism regulating the production of IL-10 is not fully understood. In this study, we report the finding that activation-induced cytidine deaminase (AID) is highly upregulated in the IL-10-competent B cell (B10) cell from Innp5dfl/flAicdaCre/+ mice, whereas the 5' inositol phosphatase SHIP-1 is downregulated. Notably, SHIP-1 deficiency in AID+ B cells leads to a reduction in cell count and impaired IL-10 production by B10 cells. Furthermore, the Innp5dfl/flAicdaCre/+ mouse model shows B cell-dependent autoimmune lupus-like phenotypes, such as elevated IgG serum Abs, formation of spontaneous germinal centers, production of anti-dsDNA and anti-nuclear Abs, and the obvious deposition of IgG immune complexes in the kidney with age. We observe that these lupus-like phenotypes can be reversed by the adoptive transfer of B10 cells from control Innp5dfl/fl mice, but not from the Innp5dfl/flAicdaCre/+ mice. This finding highlights the importance of defective B10 cells in Innp5dfl/flAicdaCre/+ mice. Whereas p-Akt is significantly upregulated, MAPK and AP-1 activation is impaired in B10 cells from Innp5dfl/flAicdaCre/+ mice, resulting in the reduced production of IL-10. These results show that SHIP-1 is required for the maintenance of B10 cells and production of IL-10, and collectively suggests that SHIP-1 could be a new potential therapeutic target for the treatment of autoimmune diseases.


Assuntos
Subpopulações de Linfócitos B/imunologia , Citidina Desaminase/imunologia , Interleucina-10/imunologia , Lúpus Eritematoso Sistêmico/imunologia , Fosfatidilinositol-3,4,5-Trifosfato 5-Fosfatases/deficiência , Transferência Adotiva , Animais , Subpopulações de Linfócitos B/patologia , Citidina Desaminase/genética , MAP Quinases Reguladas por Sinal Extracelular/genética , MAP Quinases Reguladas por Sinal Extracelular/imunologia , Centro Germinativo/imunologia , Centro Germinativo/patologia , Interleucina-10/genética , Lúpus Eritematoso Sistêmico/genética , Lúpus Eritematoso Sistêmico/patologia , Lúpus Eritematoso Sistêmico/terapia , Camundongos , Camundongos Transgênicos , Fosfatidilinositol-3,4,5-Trifosfato 5-Fosfatases/imunologia , Proteínas Proto-Oncogênicas c-akt/genética , Proteínas Proto-Oncogênicas c-akt/imunologia
15.
Chem Res Toxicol ; 30(9): 1685-1693, 2017 09 18.
Artigo em Inglês | MEDLINE | ID: mdl-28837777

RESUMO

Arsenic is a ubiquitous environmental contaminant with widespread public health concern. Epidemiological studies have revealed that chronic human exposure to arsenic in drinking water is associated with the prevalence of skin, lung, and bladder cancers. Aberrant histone modifications (e.g., methylation, acetylation, and ubiquitination) were previously found to be accompanied by arsenic exposure; thus, perturbation of epigenetic pathways is thought to contribute to arsenic carcinogenesis. Arsenite is known to interact with zinc finger motifs of proteins, and zinc finger motif is present in and indispensable for the enzymatic activities of crucial histone-modifying enzymes especially the MYST family of histone acetyltransferases (e.g., TIP60). Hence, we reasoned that trivalent arsenic may target the zinc finger motif of these enzymes, disturb their enzymatic activities, and alter histone acetylation. Herein, we found that As3+ could bind directly to the zinc-finger motif of TIP60 in vitro and in cells. In addition, exposure to As3+ could lead to a dose-dependent decrease in TIP60 protein level via the ubiquitin-proteasome pathway. Thus, the results from the present study revealed, for the first time, that arsenite may target cysteine residues in the zinc-finger motif of the TIP60 histone acetyltransferase, thereby altering the H4K16Ac histone epigenetic mark. Our results also shed some new light on the mechanisms underlying the arsenic-induced epigenotoxicity and carcinogenesis in humans.


Assuntos
Arsenitos/metabolismo , Histona Acetiltransferases/metabolismo , Complexo de Endopeptidases do Proteassoma/metabolismo , Acetilação , Arsenitos/química , Biotina/química , Ditiotreitol/química , Células HEK293 , Histona Acetiltransferases/química , Histona Acetiltransferases/genética , Histonas/metabolismo , Humanos , Leupeptinas/química , Lisina Acetiltransferase 5 , Ligação Proteica , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Ubiquitina/metabolismo , Dedos de Zinco
16.
Nat Prod Res ; 31(4): 387-396, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-27388053

RESUMO

The EtOAc extract of the liquid fermentation of Alternaria sp. Samif01, an endophytic fungus obtained from Salvia miltiorrhiza Bunge, showed antibacterial activity against several tested bacterial pathogens. Fractionation of this extract led to the isolation of seven dibenzo-α-pyrones (1-7), including one new compound, 2-acetoxy-2-epi-altenuene (1) and one new natural product, 3-epi-dihydroaltenuene A (2). The structures of the new metabolites were elucidated by comprehensive analysis of the spectroscopic data including (1D, 2D) NMR and HRESIMS, while the absolute configuration of 1 was determined by TDDFT-ECD computation. Altenuisol (5), 4-hydroxyalternariol-9-methyl ether (6), and alternariol (7) showed inhibitory activities against the tested bacteria with minimum inhibitory concentration values in the range of 86.7-364.7 µM. A preliminary structure-antibacterial activity relationship was discussed. In addition, compounds 2, 5 and 6 displayed promising antioxidant effects using DPPH and hydroxyl radical assays. The cytotoxicity of the isolated compounds was evaluated as well.


Assuntos
Alternaria/metabolismo , Antibacterianos/farmacologia , Antioxidantes/farmacologia , Pironas/farmacologia , Antibacterianos/química , Antioxidantes/química , Linhagem Celular Tumoral , Sobrevivência Celular/efeitos dos fármacos , Humanos , Lactonas/farmacologia , Pironas/química , Pironas/isolamento & purificação , Relação Estrutura-Atividade
17.
Int J Mol Sci ; 17(9)2016 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-27618012

RESUMO

Bursaphelenchus mucronatus (B. mucronatus) isolates that originate from different regions may vary in their virulence, but their virulence-associated genes and proteins are poorly understood. Thus, we conducted an integrated study coupling RNA-Seq and isobaric tags for relative and absolute quantitation (iTRAQ) to analyse transcriptomic and proteomic data of highly and weakly virulent B. mucronatus isolates during the pathogenic processes. Approximately 40,000 annotated unigenes and 5000 proteins were gained from the isolates. When we matched all of the proteins with their detected transcripts, a low correlation coefficient of r = 0.138 was found, indicating probable post-transcriptional gene regulation involved in the pathogenic processes. A functional analysis showed that five differentially expressed proteins which were all highly expressed in the highly virulent isolate were involved in the pathogenic processes of nematodes. Peroxiredoxin, fatty acid- and retinol-binding protein, and glutathione peroxidase relate to resistance against plant defence responses, while ß-1,4-endoglucanase and expansin are associated with the breakdown of plant cell walls. Thus, the pathogenesis of B. mucronatus depends on its successful survival in host plants. Our work adds to the understanding of B. mucronatus' pathogenesis, and will aid in controlling B. mucronatus and other pinewood nematode species complexes in the future.


Assuntos
Perfilação da Expressão Gênica/métodos , Genes de Helmintos/genética , Proteínas de Helminto/genética , Proteoma/genética , Proteômica/métodos , Tylenchida/genética , Animais , Parede Celular/metabolismo , Parede Celular/parasitologia , Ontologia Genética , Proteínas de Helminto/metabolismo , Interações Hospedeiro-Parasita , Pinus/crescimento & desenvolvimento , Pinus/metabolismo , Pinus/parasitologia , Doenças das Plantas/parasitologia , Proteoma/metabolismo , Interferência de RNA , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Espectrometria de Massas por Ionização por Electrospray , Espectrometria de Massas em Tandem , Tylenchida/metabolismo , Tylenchida/patogenicidade , Virulência/genética
18.
J Nat Prod ; 79(8): 2022-31, 2016 08 26.
Artigo em Inglês | MEDLINE | ID: mdl-27441892

RESUMO

Six new dibenzo-α-pyrones, rhizopycnolides A (1) and B (2) and rhizopycnins A-D (3-6), together with eight known congeners (7-14), were isolated from the endophytic fungus Rhizopycnis vagum Nitaf22 obtained from Nicotiana tabacum. The structures of the new compounds were unambiguously elucidated using NMR, HRESIMS, TDDFT ECD calculation, and X-ray crystallography data. Rhizopycnolides A (1) and B (2) feature an uncommon γ-butyrolactone-fused dibenzo-α-pyrone tetracyclic skeleton (6/6/6/5), while rhizopycnin B (4) was the first amino group containing dibenzo-α-pyrone. Rhizopycnolides A (1) and B (2) are proposed to be biosynthesized from polyketide and tricarboxylic acid cycle pathways. The isolated compounds were tested for their antibacterial, antifungal, and cytotoxic activities. Among them, rhizopycnolide A (1), rhizopycnins C (5) and D (6), TMC-264 (8), penicilliumolide D (11), and alternariol (12) were active against the tested pathogenic bacteria Agrobacterium tumefaciens, Bacillus subtilis, Pseudomonas lachrymans, Ralstonia solanacearum, Staphylococcus hemolyticus, and Xanthomonas vesicatoria with MIC values in the range 25-100 µg/mL. Rhizopycnin D (6) and TMC-264 (8) strongly inhibited the spore germination of Magnaporthe oryzae with IC50 values of 9.9 and 12.0 µg/mL, respectively. TMC-264 (8) showed potent cytotoxicity against five human cancer cell lines (HCT-116, HepG2, BGC-823, NCI-H1650, and A2780) with IC50 values of 3.2-7.8 µM.


Assuntos
Antibacterianos/farmacologia , Antifúngicos/farmacologia , Ascomicetos/química , Cromonas/isolamento & purificação , Cromonas/farmacologia , Policetídeos/isolamento & purificação , Policetídeos/farmacologia , 4-Butirolactona/química , Agrobacterium tumefaciens/efeitos dos fármacos , Antibacterianos/química , Antibacterianos/isolamento & purificação , Antifúngicos/química , Antifúngicos/isolamento & purificação , Bacillus subtilis/efeitos dos fármacos , Bacillus subtilis/metabolismo , Cromonas/química , Cristalografia por Raios X , Ensaios de Seleção de Medicamentos Antitumorais , Células HCT116 , Células Hep G2 , Compostos Heterocíclicos com 3 Anéis/química , Compostos Heterocíclicos com 3 Anéis/farmacologia , Humanos , Lactonas/farmacologia , Testes de Sensibilidade Microbiana , Estrutura Molecular , Policetídeos/química , Pseudomonas/efeitos dos fármacos , Ralstonia solanacearum/efeitos dos fármacos , Staphylococcus/efeitos dos fármacos , Nicotiana/microbiologia , Xanthomonas vesicatoria/efeitos dos fármacos
19.
Nano Lett ; 16(4): 2686-91, 2016 Apr 13.
Artigo em Inglês | MEDLINE | ID: mdl-27031226

RESUMO

Large magnetic nanoparticles or aggregates are advantageous in their magnetic resonance properties over ultrasmall superparamagnetic iron oxide (USPIO) nanoparticles (NPs), but the former are cleared faster from the blood pool. Therefore, the "smart" strategy of intracellular aggregation of USPIO NPs is required for enhanced T2-weighted MR imaging. Herein, employing an enzyme-instructed condensation reaction, we rationally designed a small molecule Ac-Asp-Glu-Val-Asp-Cys(StBu)-Lys-CBT (1) to covalently modify USPIO NPs to prepare monodispersive Fe3O4@1 NPs. In vitro results showed that Fe3O4@1 NPs could be subjected to caspase 3 (Casp3)-instructed aggregation. T2 phantom MR imaging showed that the transverse molar relaxivity (r2) of Fe3O4@1 NPs with Casp3 or apoptotic HepG2 cells was significantly larger than those of control groups. In vivo tumor MR imaging results indicated that Fe3O4@1 NPs could be specifically applied for enhanced T2 MR imaging of tumor apoptosis. We propose that the enzyme-instructed intracellular aggregation of Fe3O4 NPs could be a novel strategy for the design of "smart" probes for efficient T2 MR imaging of in vivo biomarkers.


Assuntos
Apoptose , Caspase 3/metabolismo , Caspase 7/metabolismo , Imageamento por Ressonância Magnética , Nanopartículas de Magnetita/química , Proteínas de Neoplasias/metabolismo , Neoplasias , Células Hep G2 , Humanos , Neoplasias/diagnóstico por imagem , Neoplasias/enzimologia
20.
Toxins (Basel) ; 8(1)2016 Jan 12.
Artigo em Inglês | MEDLINE | ID: mdl-26771638

RESUMO

Ustilaginoidins are bis-naphtho-γ-pyrone mycotoxins isolated from the rice false smut balls (FSBs) infected by the pathogen Villosiclava virens in rice spikelets on panicles. In order to obtain large amounts of pure ustilaginoidins to further evaluate their biological activities and functions, phytotoxicity on rice, security to human and animals as well as to accelerate their applications as pharmaceuticals, preparative high-speed counter-current chromatography (HSCCC) was successfully applied to the isolation and purification of seven bis-naphtho-γ-pyrone mycotoxins, namely ustilaginoidins A (1), G (2), B (3), H (4), I (5), C (6), and J (7) from the ethyl acetate crude extract of rice FSBs. Both 1 and 2 were prepared by HSCCC from the low-polarity fraction of the crude extract using the two-phase solvent system composed of n-hexane-ethyl acetate-methanol-water at the volume ratio of 6.5:3.5:5.0:5.0. Similarly, 3, 4 and 5 were prepared from the medium-polarity fraction using the system at the volume ratio of 4.0:5.0:5.0:6.0, and 6 and 7 were prepared from the higher-polarity fraction using the system at volume ratio of 3.0:5.0:4.0:6.7. A total of 6.2 mg of 1, 5.1 mg of 2, 3.9 mg of 3, 1.2 mg of 4, 5.7 mg of 5, 3.5 mg of 6, and 6.1 mg of 7 with purities of 88%, 82%, 91%, 80%, 92%, 81% and 83%, respectively, were yielded from total 62 mg fraction samples in three independent HSCCC runs. The structures of the purified ustilaginoidins were characterized by means of physicochemical and spectrometric analysis.


Assuntos
Misturas Complexas/química , Hypocreales , Micotoxinas/análise , Doenças das Plantas , Pironas/análise , Cromatografia/métodos , Oryza/microbiologia
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