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1.
Langmuir ; 39(6): 2281-2290, 2023 Feb 14.
Artigo em Inglês | MEDLINE | ID: mdl-36716440

RESUMO

Physically cross-linked gels have unique advantages of repeated swelling and shrinking of network structures, where the stability of gels at the swelled phase, particularly under ionic conditions, is extremely critical. In this study, it has been shown that functionalized nanofillers and polar solvents can increase the network densities of physically cross-linked gels with higher dimensional stability by increasing the polar and electrostatic interactions. The characteristic nonbonded interactions of CNTs with ionic solvents have been utilized for the controlled swelling of toughened double-network gels as the function of pH and time. The swelling of the overall gel morphology is found to be important for the release of analytes; however, the functional cross-sectional sites in the nanohybrids hold the key for desorption kinetics. The selection of interactive functional moieties in the nanohybrids and analytes has led to the development of highly efficient and controlled release media. The electrostatic interaction of analytes with functionally and dimensionally stable gels with controlled porosity indicates a clear structure-property correlation, which could be exploited to design and fabricate efficient drug delivery vehicles and rapid surface decontaminants.

2.
J Genet ; 1012022.
Artigo em Inglês | MEDLINE | ID: mdl-35129127

RESUMO

Memecylon (Melastomaceae) is a large genus of the Old-World predominantly woody species. Many species of Memecylon are used for timber, ornamental and medicinal purposes. The objective of the present study was to undertake a phylogenetic analysis of Indian Memecylon based on nuclear ribosomal DNA internal transcribed spacer (nrDNA-ITS) and rbcL sequence data. Sampling included 26 species and one variety (20 endemics) representing 67% of the total Indian species. Molecular phylogeny data for analysed species revealed that the Indian Memecylon is monophyletic. Monophyly is strongly supported in the ITS, rbcL and ITS + rbcL combined analyses. Memecylon species are grouped in a major clade with strong support in ITS sequence data and moderate support in combined ITS + rbcL analyses.


Assuntos
Melastomataceae , Núcleo Celular/genética , DNA de Cloroplastos/genética , DNA de Plantas/genética , DNA Ribossômico/genética , DNA Espaçador Ribossômico/genética , Melastomataceae/genética , Filogenia , Análise de Sequência de DNA
3.
J Genet ; 97(5): 1139-1146, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30555063

RESUMO

Crepidium acuminatum (Orchidaceae) is a threatened medicinal orchid that grows under shady and moist forest floor where light remains for a very short period of time. Mycorrhizal association is known to be essential for seed germination and seedling establishment in amajority of orchids. Identification of fungi that form mycorrhizae with orchids is of crucial importance for orchid conservation. We used both morphological as well as molecular approaches to study this plant-fungal interaction. Scanning electron microscopy showed that fungi grow and proliferate in the middle layers of the cortex. Also, spiral-root hairs were foundalong with root hairs, which is an unusual observation. Spiral-root hairs provide more surface area for fluid absorption and entrance of colonizers. Further, total root genomic DNA was isolated and fungal internal-transcribed spacer (ITS) regions were polymerase chain reaction (PCR)-amplified using specific primer combinations ITS1F/ITS4 and ITS1/ITS4tul. ITS sequences were obtainedand analysed to know the closest sequence matche in the GenBank using BLASTn hosted by NLM-NCBI. Subject sequences were identified to be belonging to three main genera, namely, Tulasnella, Aspergillus and Penicillium. Results indicate that mycorrhizal association is necessary for the growth and development of the plant. In addition, this symbiosis influences the distribution and rarity of this medicinally valuable taxon. Specific fungal partners may lead to an enhanced seed germination rate and increased efficiency of nutrient exchange between both the partners. Hence, knowledge of mycorrhizal fungi is essential for future in vitro germination and seedling establishment programmes, because they rely on fungi for germination. Identification of mycorrhizal fungi can be usedfor orchid propagation and conservation programmes.


Assuntos
Basidiomycota/ultraestrutura , Interações Hospedeiro-Patógeno , Orchidaceae/microbiologia , Orchidaceae/ultraestrutura , Raízes de Plantas/microbiologia , Raízes de Plantas/ultraestrutura , Simbiose , Basidiomycota/classificação , Microscopia Eletrônica de Varredura
4.
J Genet ; 97(5): 1225-1239, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30555072

RESUMO

Jasminum L. (Oleaceae) consists of ∼200 species that are distributed in tropical, subtropical and temperate regions of the world. In India, this genus is represented by ca 47 species of which 16 are endemic. Based on the nuclear (internal-transcribed spacer (ITS) region of nrDNA and chloroplast markers (matK, trnL-F and trnH-psbA), phylogenetic relationships in 22 species including one variety of Jasminum in India have been assessed. Maximum likelihood and Bayesian analyses from individual markers, as well as from combined dataset, reveal that the group is monophyletic if Menodora spp. are excluded from the analyses. Our analyses recovered three strongly supported clades. Ancestral character state reconstruction of taxonomically useful characters (leaf forms, leaf arrangement and flower colour) which were used to demarcate sections within the genus reveals homoplasy. Our study suggests that after split from the last common ancestor, there have been at least four reversals to unifoliolate condition. Pinnately compound leaf form evolved at least twice and trifoliolate condition evolved one time only. Alternate leaf form evolved at least twice, once inclade 1 and once in clade 3 and all the time from ancestors having opposite leaf forms. Flower colour evolution clearly depicts that clade 1 is yellow-flowered and clades 2 and 3 have admixture of white and yellow-flowered Jasminum species. Our study suggests that yellow-flowered condition evolved from the white-flowered ancestor. The present study is first to estimate the evolutionary history of Indian Jasmines.


Assuntos
Cloroplastos/genética , DNA de Plantas/genética , Evolução Molecular , Jasminum/classificação , Jasminum/genética , Filogenia , Teorema de Bayes , DNA Espaçador Ribossômico/genética , Flores/genética , Jasminum/anatomia & histologia , Análise de Sequência de DNA
5.
Lancet Glob Health ; 5(4): e458-e466, 2017 04.
Artigo em Inglês | MEDLINE | ID: mdl-28153514

RESUMO

BACKGROUND: Outbreaks of unexplained illness frequently remain under-investigated. In India, outbreaks of an acute neurological illness with high mortality among children occur annually in Muzaffarpur, the country's largest litchi cultivation region. In 2014, we aimed to investigate the cause and risk factors for this illness. METHODS: In this hospital-based surveillance and nested age-matched case-control study, we did laboratory investigations to assess potential infectious and non-infectious causes of this acute neurological illness. Cases were children aged 15 years or younger who were admitted to two hospitals in Muzaffarpur with new-onset seizures or altered sensorium. Age-matched controls were residents of Muzaffarpur who were admitted to the same two hospitals for a non-neurologic illness within seven days of the date of admission of the case. Clinical specimens (blood, cerebrospinal fluid, and urine) and environmental specimens (litchis) were tested for evidence of infectious pathogens, pesticides, toxic metals, and other non-infectious causes, including presence of hypoglycin A or methylenecyclopropylglycine (MCPG), naturally-occurring fruit-based toxins that cause hypoglycaemia and metabolic derangement. Matched and unmatched (controlling for age) bivariate analyses were done and risk factors for illness were expressed as matched odds ratios and odds ratios (unmatched analyses). FINDINGS: Between May 26, and July 17, 2014, 390 patients meeting the case definition were admitted to the two referral hospitals in Muzaffarpur, of whom 122 (31%) died. On admission, 204 (62%) of 327 had blood glucose concentration of 70 mg/dL or less. 104 cases were compared with 104 age-matched hospital controls. Litchi consumption (matched odds ratio [mOR] 9·6 [95% CI 3·6 - 24]) and absence of an evening meal (2·2 [1·2-4·3]) in the 24 h preceding illness onset were associated with illness. The absence of an evening meal significantly modified the effect of eating litchis on illness (odds ratio [OR] 7·8 [95% CI 3·3-18·8], without evening meal; OR 3·6 [1·1-11·1] with an evening meal). Tests for infectious agents and pesticides were negative. Metabolites of hypoglycin A, MCPG, or both were detected in 48 [66%] of 73 urine specimens from case-patients and none from 15 controls; 72 (90%) of 80 case-patient specimens had abnormal plasma acylcarnitine profiles, consistent with severe disruption of fatty acid metabolism. In 36 litchi arils tested from Muzaffarpur, hypoglycin A concentrations ranged from 12·4 µg/g to 152·0 µg/g and MCPG ranged from 44·9 µg/g to 220·0 µg/g. INTERPRETATION: Our investigation suggests an outbreak of acute encephalopathy in Muzaffarpur associated with both hypoglycin A and MCPG toxicity. To prevent illness and reduce mortality in the region, we recommended minimising litchi consumption, ensuring receipt of an evening meal and implementing rapid glucose correction for suspected illness. A comprehensive investigative approach in Muzaffarpur led to timely public health recommendations, underscoring the importance of using systematic methods in other unexplained illness outbreaks. FUNDING: US Centers for Disease Control and Prevention.


Assuntos
Encefalopatia Aguda Febril/diagnóstico , Surtos de Doenças/estatística & dados numéricos , Frutas/toxicidade , Litchi/toxicidade , Síndromes Neurotóxicas/diagnóstico , Encefalopatia Aguda Febril/epidemiologia , Encefalopatia Aguda Febril/etiologia , Adolescente , Estudos de Casos e Controles , Criança , Ciclopropanos/análise , Feminino , Glicina/análogos & derivados , Glicina/análise , Humanos , Hipoglicinas/análise , Índia , Masculino , Síndromes Neurotóxicas/epidemiologia , Síndromes Neurotóxicas/etiologia , Razão de Chances
6.
PLoS One ; 11(7): e0159050, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27434060

RESUMO

Pittosporum eriocarpum Royle, a medicinally important taxon, is endemic to Uttarakhand region of Himalaya. It has become endangered due to over-collection and the loss of habitats. As raising plants through seeds in this plant is problematic, a reliable protocol for micropropagation using nodal explants has been developed. High shoot regeneration (95%) occurred in MS medium augmented with BA 0.4mg/l in combination IBA 0.6mg/l. In vitro regenerated shoots were rooted in MS medium supplemented with three auxins, of which 0.6 mg/l indole butyric acid proved to be the best for rooting (90%) with maximum number of roots per shoot. Thereafter, rooted plants were hardened and nearly 73% of rooted shoots were successfully acclimatized and established in the field. Start codon targeted (SCoT), inter simple sequence repeats (ISSR) and random amplified polymorphic DNA (RAPD) markers were used to validate the genetic homogeneity amongst nine in vitro raised plantlets with mother plant. DNA fingerprints of in vitro regenerated plantlets displayed monomorphic bands similar to mother plant, indicating homogeneity among the micropropagated plants with donor mother plant. The similarity values were calculated based on SCoT, ISSR and RAPD profiles which ranged from 0.89 to 1.00, 0.91 to 1.00 and 0.95 to 1.00 respectively. The dendrograms generated through Unweighted Pair Group Method with arithmetic mean (UPGMA) analysis revealed 97% similarity amongst micropropagated plants with donor mother plant, thus confirming genetic homogeneity of micropropagated clones. This is the first report on micropropagation and genetic homogeneity assessment of P. eriocarpum. The protocol would be useful for the conservation and large scale production of P. eriocarpum to meet the demand for medicinal formulations and also for the re-introduction of in vitro grown plants in the suitable natural habitats to restore the populations.


Assuntos
Espécies em Perigo de Extinção , Plantas Medicinais/genética , Técnica de Amplificação ao Acaso de DNA Polimórfico/métodos , Rosales/genética , Códon de Iniciação/genética , Impressões Digitais de DNA , Ácidos Indolacéticos/metabolismo , Repetições de Microssatélites/genética , Sementes/genética , Sementes/crescimento & desenvolvimento
7.
MMWR Morb Mortal Wkly Rep ; 64(3): 49-53, 2015 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-25632950

RESUMO

Outbreaks of an unexplained acute neurologic illness affecting young children and associated with high case-fatality rates have been reported in the Muzaffarpur district of Bihar state in India since 1995. The outbreaks generally peak in June and decline weeks later with the onset of monsoon rains. There have been multiple epidemiologic and laboratory investigations of this syndrome, leading to a wide spectrum of proposed causes for the illness, including infectious encephalitis and exposure to pesticides. An association between illness and litchi fruit has been postulated because Muzaffarpur is a litchi fruit-producing region. To better characterize clinical and epidemiologic features of the illness that might suggest its cause and how it can be prevented, the Indian National Centre for Disease Control (NCDC) and CDC investigated outbreaks in 2013 and 2014. Clinical and laboratory findings in 2013 suggested a noninflammatory encephalopathy, possibly caused by a toxin. A common laboratory finding was low blood glucose (<70 mg/dL) on admission, a finding associated with a poorer outcome; 44% of all cases were fatal. An ongoing 2014 investigation has found no evidence of any infectious etiology and supports the possibility that exposure to a toxin might be the cause. The outbreak period coincides with the month-long litchi harvesting season in Muzaffarpur. Although a specific etiology has not yet been determined, the 2014 investigation has identified the illness as a hypoglycemic encephalopathy and confirmed the importance of ongoing laboratory evaluation of environmental toxins to identify a potential causative agent, including markers for methylenecyclopropylglycine (MCPG), a compound found in litchi seeds known to cause hypoglycemia in animal studies. Current public health recommendations are focused on reducing mortality by urging affected families to seek prompt medical care, and ensuring rapid assessment and correction of hypoglycemia in ill children.


Assuntos
Surtos de Doenças , Síndromes Neurotóxicas/epidemiologia , Doença Aguda , Adolescente , Criança , Pré-Escolar , Feminino , Humanos , Hipoglicemia/etiologia , Índia/epidemiologia , Lactente , Litchi/toxicidade , Masculino , Síndromes Neurotóxicas/mortalidade , Fatores de Tempo
8.
J Health Popul Nutr ; 31(3): 403-4, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-24288955

RESUMO

The prevalence of nalidixic acid-resistant Salmonella Typhi (NARST) infection is increasing worldwide. We are reporting an unusual case of infected haematocolpos presenting as urinary obstruction in a patient with fever of unknown origin (FUO). This case report highlights the importance of quinolone-resistant typhoid fever in the differential diagnosis of any acute febrile illness in countries, like India, where Salmonella infection is endemic.


Assuntos
Antibacterianos/uso terapêutico , Farmacorresistência Bacteriana , Febre de Causa Desconhecida/etiologia , Hematocolpia/complicações , Ácido Nalidíxico , Salmonella typhi/isolamento & purificação , Anti-Infecciosos/uso terapêutico , Ceftriaxona/uso terapêutico , Criança , Ciprofloxacina/uso terapêutico , Diagnóstico Diferencial , Feminino , Febre de Causa Desconhecida/tratamento farmacológico , Hematocolpia/tratamento farmacológico , Hematocolpia/cirurgia , Humanos , Metronidazol/uso terapêutico
9.
J Proteome Res ; 11(3): 1844-54, 2012 Mar 02.
Artigo em Inglês | MEDLINE | ID: mdl-22292465

RESUMO

To address the shortcomings of urine culture for the rapid identification of urinary tract infection (UTI), we applied (1)H-nuclear magnetic resonance (NMR) spectroscopy as a surrogate method for fast screening of microorganisms. Study includes 682 urine samples from suspected UTI patients, 50 healthy volunteers, and commercially available standard strains of gram negative bacilli (GNB) (Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumonia, Enterobacter, Acinetobacter, Proteus mirabilis, Citrobacter frundii) and gram positive cocci (GPC) (Enterococcus faecalis, Streptococcus group B, Staphylococcus saprophyticus). Acetate, lactate, ethanol, succinate, creatinine, trimethylamine (TMA), citrate, trimethylamin-N-oxide, glycine, urea, and hippurate were measured by (1)H NMR spectroscopy. All urine specimens were evaluated with culture method. Multivariate discriminant function analysis (DFA) reveals that acetate, lactate, succinate, and formate were able to differentiate, with high accuracy (99.5%), healthy controls from UTI patients. This statistical analysis was also able to classify GNB to GPC infected urine samples with high accuracy (96%). This technique appears to be a promising, rapid, and noninvasive approach to probing GNB and GPC infected urine specimens with its distinguishing metabolic profile. The determination of infection will be very important for rapidly and efficiently measuring the efficacy of a tailored treatment, leading to prompt and appropriate care of UTI patients.


Assuntos
Infecções por Bactérias Gram-Negativas/microbiologia , Infecções por Bactérias Gram-Positivas/microbiologia , Infecções Urinárias/microbiologia , Adulto , Área Sob a Curva , Estudos de Casos e Controles , Meios de Cultura/química , Feminino , Bactérias Gram-Negativas/isolamento & purificação , Bactérias Gram-Negativas/metabolismo , Infecções por Bactérias Gram-Negativas/diagnóstico , Infecções por Bactérias Gram-Negativas/urina , Bactérias Gram-Positivas/isolamento & purificação , Bactérias Gram-Positivas/metabolismo , Infecções por Bactérias Gram-Positivas/diagnóstico , Infecções por Bactérias Gram-Positivas/urina , Humanos , Espectroscopia de Ressonância Magnética , Metaboloma , Pessoa de Meia-Idade , Análise Multivariada , Curva ROC , Urinálise/métodos , Infecções Urinárias/diagnóstico , Infecções Urinárias/urina , Adulto Jovem
10.
Urol Res ; 40(2): 143-50, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21688109

RESUMO

Proanthocyanidin is commonly used for inhibiting urinary tract infection (UTI) of sensitive strains of Escherichia coli. The aim of this study was to investigate the effect of proanthocyanidin on adherence of uropathogenic multi-drug resistant E. coli to uroepithelial cells, which has not yet been investigated so far. Extracts of the purified proanthocyanidin were prepared from dried cranberry juice. Purity and structural assignment of proanthocyanidin was assessed using high performance liquid chromatography and (13)C nuclear magnetic resonance spectroscopy, respectively. Subsequently, its affect on multi-drug resistant bacteria as well as quantification of anti-adherence bioactivity on human vaginal and bladder epithelial cells was appraised. Inhibition of adherence to an extent of about 70% with multi-drug resistant E. coli strains was observed on uroepithelial cell. The anti-adherence bioactivity of the proanthocyanidin was detected at concentrations of 10-50 µg/ml with significant bacteriuria. Probable proanthocyanidin through A-type linkages either combines to P-fimbriae of bacterial cells or modifies the structural entity of P-fimbriae and inhibits bacterial adherence to uroepithelial cells. The proanthocyanidin exhibited anti-adherence property with multi-drug resistant strains of uropathogenic P-fimbriated E. coli with in vitro study. Hence proanthocyanidin may be considered as an inhibitory agent for multi-drug resistant strains of E. coli adherence to uroepithelial cells.


Assuntos
Aderência Bacteriana/efeitos dos fármacos , Farmacorresistência Bacteriana Múltipla/efeitos dos fármacos , Células Epiteliais/efeitos dos fármacos , Escherichia coli/efeitos dos fármacos , Extratos Vegetais/farmacologia , Proantocianidinas/farmacologia , Vaccinium macrocarpon , Aderência Bacteriana/fisiologia , Células Cultivadas , Relação Dose-Resposta a Droga , Farmacorresistência Bacteriana Múltipla/fisiologia , Células Epiteliais/citologia , Células Epiteliais/microbiologia , Escherichia coli/patogenicidade , Escherichia coli/fisiologia , Infecções por Escherichia coli/microbiologia , Infecções por Escherichia coli/prevenção & controle , Feminino , Hemaglutinação/efeitos dos fármacos , Humanos , Técnicas In Vitro , Extratos Vegetais/uso terapêutico , Proantocianidinas/uso terapêutico , Bexiga Urinária/citologia , Bexiga Urinária/efeitos dos fármacos , Bexiga Urinária/microbiologia , Infecções Urinárias/microbiologia , Infecções Urinárias/prevenção & controle , Vagina/citologia , Vagina/efeitos dos fármacos , Vagina/microbiologia
11.
J Med Microbiol ; 59(Pt 8): 955-960, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20413621

RESUMO

An important risk factor for nosocomial infection in an intensive care unit (ICU) is prior colonization. This study was undertaken to determine the spectrum of bacterial colonization and predisposing risk factors in patients being admitted to an ICU in India, with special emphasis on extended-spectrum beta-lactamase (ESBL)- and metallo-beta-lactamase (MBL)-producing Gram-negative bacteria. Nasal, oral and rectal swab samples were collected and processed for isolation of ESBL-producing Gram-negative bacteria and MBL-producing Pseudomonas aeruginosa and Acinetobacter species. Bacterial colonization (of one or more sites) on admission was detected in 51 out of 96 patients included in the study. Non-fermenters, i.e. P. aeruginosa and Acinetobacter baumannii, were the most common colonizers, present in 37 patients, with simultaneous colonization in 12 patients. A total of 16 patients were colonized with MBL-producing members of the family Enterobacteriaceae, out of which 11 isolates (from 5 patients) were also carrying ESBL-encoding genes. As for MBLs, most of our patients have shown colonization with ESBL-producing bacteria. On admission, 47 of 51 patients (92 %) have been colonized by ESBL-producing members of the family Enterobacteriaceae, at one or more of the three anatomical sites. The most common MBL subtype was bla(IMP) (51.56 %), whereas bla(CTX) was the most common gene (84.9 %) identified among ESBL producers. Risk factors for colonization on admission to the ICU were hospitalization for more than 48 h, use of >or=3 groups of antibiotics, co-morbidities and mechanical ventilation for more than 48 h prior to ICU admission. There is an increasing incidence of MBLs and ESBLs in the Indian population. The identified risk factors can be used as a guide for empiric antibiotic therapy targeted to these resistant bacteria.


Assuntos
Proteínas de Bactérias/biossíntese , Portador Sadio/microbiologia , Infecção Hospitalar/microbiologia , Bactérias Gram-Negativas/enzimologia , Bactérias Gram-Negativas/isolamento & purificação , Infecções por Bactérias Gram-Negativas/microbiologia , beta-Lactamases/biossíntese , Adulto , Idoso , Portador Sadio/epidemiologia , Infecção Hospitalar/epidemiologia , Feminino , Infecções por Bactérias Gram-Negativas/epidemiologia , Humanos , Índia , Unidades de Terapia Intensiva , Masculino , Pessoa de Meia-Idade , Boca/microbiologia , Cavidade Nasal/microbiologia , Prevalência , Reto/microbiologia , Adulto Jovem
12.
Indian J Pathol Microbiol ; 52(3): 339-42, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19679955

RESUMO

CONTEXT: Ventilator-associated pneumonia (VAP) is a leading nosocomial infection in the intensive care unit (ICU). Members of Enterobacteriaceae are the most common causative agents and carbapenems are the most commonly used antibiotics. Metallo-beta-lactamase (MBL) production leading to treatment failure may go unnoticed by routine disc diffusion susceptibility testing. Moreover, there is not much information on association of MBL-producing Enterobacteriaceae with ICU-acquired VAP. Therefore, a study was undertaken to find out the association of MBL-producing Enterobacteriaceae with VAP. SETTINGS: This study was conducted in a large tertiary care hospital of North India with an eight-bed critical care unit. MATERIALS AND METHODS: The respiratory samples (bronchoalveolar lavage, protected brush catheter specimens and endotracheal or transtracheal aspirates) obtained from VAP patients (during January 2005-December 2006) were processed, isolated bacteria identified and their antibiotic susceptibilities tested as per standard protocols. The isolates of Enterobacteriaceae resistant to carbapenem were subjected to phenotypic and genotypic tests for the detection of MBLs. RESULTS: Twelve of 64 isolates of Enterobacteriaceae were detected as MBL producers, bla(IMP) being the most prevalent gene. Additionally, in three strains, simultaneous coexistence of multiple MBL genes was detected. CONCLUSION: The coexistence of multiple MBL genes in Enterobacteriaceae is an alarming situation. As MBL genes are associated with integrons that can be embedded in transposons, which in turn can be accommodated on plasmids thereby resulting in a highly mobile genetic apparatus, the further spread of these genes in different pathogens is likely to occur.


Assuntos
Infecção Hospitalar/microbiologia , Infecções por Enterobacteriaceae/microbiologia , Enterobacteriaceae/efeitos dos fármacos , Enterobacteriaceae/genética , Pneumonia Associada à Ventilação Mecânica/microbiologia , Resistência beta-Lactâmica , beta-Lactamases/genética , Antibacterianos/farmacologia , Proteínas de Bactérias/genética , Carbapenêmicos/farmacologia , Enterobacteriaceae/enzimologia , Enterobacteriaceae/isolamento & purificação , Humanos , Índia , Unidades de Terapia Intensiva , Sequências Repetitivas Dispersas , Testes de Sensibilidade Microbiana , beta-Lactamases/biossíntese
13.
Pediatr Infect Dis J ; 28(7): 649-50, 2009 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-19483661

RESUMO

Fulminant hepatic failure (FHF) associated with parvovirus B19 (B19) infection has a favorable prognosis in children. However, there is no data available to predict outcome in cases of FHF associated with hepatotropic virus coinfection. Clinical characteristics of 3 pediatric groups with FHF were compared and it was observed that B19 coinfection with other viruses adds to the severity of the disease and increases the probability of a fatal outcome.


Assuntos
Vírus de Hepatite/isolamento & purificação , Hepatite Viral Humana/complicações , Hepatite Viral Humana/epidemiologia , Falência Hepática Aguda/epidemiologia , Falência Hepática Aguda/virologia , Infecções por Parvoviridae/complicações , Infecções por Parvoviridae/epidemiologia , Parvovirus B19 Humano/isolamento & purificação , Criança , Pré-Escolar , Comorbidade , Feminino , Hepatite Viral Humana/mortalidade , Hepatite Viral Humana/virologia , Humanos , Falência Hepática Aguda/mortalidade , Falência Hepática Aguda/patologia , Masculino , Infecções por Parvoviridae/mortalidade , Infecções por Parvoviridae/virologia , Resultado do Tratamento
14.
BJU Int ; 104(2): 236-44, 2009 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-19239442

RESUMO

OBJECTIVE: To address the shortcomings of urine culture for the diagnosis of urinary tract infection (UTI), we used 1H-nuclear magnetic resonance (NMR) spectroscopy for identifying and quantifying Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumonia and Proteus mirabilis. PATIENTS, SUBJECTS AND METHODS: Urine samples from patients with suspected UTI (617), healthy volunteers (50) and commercially available standard strains of E. coli, K. pneumonia, P. aeruginosa, Enterobacter, Acinobacter, Pr. mirabilis, Citrobacter frundii, Streptococcus saprophyticus and Enterococcus faecalis were assessed between 2003 and 2006. 1H-NMR spectra were recorded on a 400 MHz spectrophotometer; to quantify the bacteria we estimated the areas under the spectral peaks of the specific metabolic product compared with the known concentration of trimethyl silyl propionic acid. All urine specimens were cultured in addition to an assessment by NMR spectroscopy. RESULTS: Preliminary urinary spectroscopy of the unprocessed samples showed peaks of nonspecific metabolites such as succinate, acetate, lactate and ethanol, indicating infected samples. Based on the results from processed samples, 93% (240/256) of E. coli, 92% (101/110) of K. pneumoniae, 93% (56/60) of P. aeruginosa and eight of 10 Pr. mirabilis could be diagnosed with NMR (numerator) and urine culture (denominator). The remaining samples were sterile and/or had a bacterial population of <10(3) colony-forming units (CFU)/mL. The NMR method diagnosed bacterial densities of >10(3) CFU. CONCLUSIONS: The identification of the common uropathogens E. coli, K. pneumoniae, P. aeruginosa and Pr. mirabilis by NMR spectroscopy has a shorter reporting time and can be used to differentiate between infected, contaminated and sterile specimens.


Assuntos
Bactérias/isolamento & purificação , Infecções Bacterianas/microbiologia , Espectroscopia de Ressonância Magnética/métodos , Infecções Urinárias/microbiologia , Infecções Bacterianas/diagnóstico , Infecções Bacterianas/urina , Estudos de Casos e Controles , Humanos , Espectroscopia de Ressonância Magnética/uso terapêutico , Sensibilidade e Especificidade , Infecções Urinárias/diagnóstico , Infecções Urinárias/urina
15.
NMR Biomed ; 19(8): 1055-61, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-16927393

RESUMO

The (1)H NMR spectroscopic method is suggested and its utility is demonstrated for the diagnosis of Klebsiella pneumoniae (K. pneumoniae) in urinary tract infection (UTI). K. pneumoniae have the specific property of metabolizing glycerol to 1,3-propanediol (1,3-PD), acetate, ethanol and succinate. The quantity of 1,3-PD produced correlates well with the viable bacterial count. Other common bacteria causing UTI (except for Citrobacter frundii), such as Escherichia coli (E. coli), Pseudomonas aeruginosa (P. aeruginosa), Enterobacter aerogenes, Acinetobacter baumanii, Proteus mirabilis, Enterococcus faecalis, Streptococcus gp B and Staphylococcus aureus do not metabolize glycerol under similar conditions. Citrobacter frundii (C. frundii) also gives the same NMR results but is easily differentiated as being motile on direct microscopic examination of urine and it is not common nosocomial infectious agent in urinary tract infection. The method provides a single-step documentation of K. pneumoniae (and C. frundii) qualitatively as well as quantitatively. Out of the total 614 subjects considered, clinical diagnosis of UTI was obtained in 516 cases (84%). The NMR-based screening had a sensitivity of 90%, a specificity of 100% and a false negativity of 10% relative to the conventional quantitative culture method. In the present authors' experience, the results of NMR spectroscopy based screening show a very good correlation with the diagnosis of urinary tract infected patients.


Assuntos
Infecções por Klebsiella/diagnóstico , Espectroscopia de Ressonância Magnética/métodos , Infecções Urinárias/diagnóstico , Bactérias/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Sobrevivência Celular , Humanos , Hidrogênio , Klebsiella pneumoniae/crescimento & desenvolvimento , Nefelometria e Turbidimetria , Valores de Referência , Sensibilidade e Especificidade
16.
NMR Biomed ; 18(5): 293-9, 2005 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15759292

RESUMO

The utility of (1)H NMR spectroscopy is suggested and demonstrated for the diagnosis of Pseudomonas aeruginosa in urinary tract infection (UTI). The specific property of P. aeruginosa of metabolizing nicotinic acid to 6-hydroxynicotinic acid (6-OHNA) is exploited. The quantity of 6-OHNA produced correlates well with the viable bacterial count. Other common bacteria causing UTI such as Escherichia coli, Klebsiella pneumonia, Enterobacter aerogenes, Acinetobacter baumanii, Proteus mirabilis, Citrobacter frundii, Enterococcus faecalis, Streptococcus gp B and Staphylococcus aureus do not metabolize nicotinic acid under similar conditions. The method provides a single-step documentation of P. aeruginosa qualitatively as well as quantitatively. The NMR method is demonstrated on urine samples from 30 patients with UTI caused by P. aeruginosa.


Assuntos
Contagem de Colônia Microbiana/métodos , Espectroscopia de Ressonância Magnética/métodos , Ácidos Nicotínicos/metabolismo , Infecções por Pseudomonas/diagnóstico , Infecções por Pseudomonas/metabolismo , Infecções Urinárias/diagnóstico , Infecções Urinárias/microbiologia , Biomarcadores/metabolismo , Humanos , Niacina/metabolismo , Prótons , Infecções por Pseudomonas/microbiologia , Pseudomonas aeruginosa/isolamento & purificação , Pseudomonas aeruginosa/metabolismo , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Infecções Urinárias/metabolismo
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