Cross-sectional and longitudinal method for describing growth curve of rabbits / Método transversal e longitudinal para descrição da curva de crescimento de coelhos

Rabbit farming is an activity with high growth potential due to its easy handling, high prolificacy, low polluting impact, and easy adaptability to family farming systems, producing meat of high biological value. Therefore, the aim of this work was to evaluate, using von Bertalanffy's nonlinear model, growth curves of weight as a function of age in 'Flemish Giant Rabbits' and 'New Zealand White' crossbred rabbits. Two different data collections were used: the longitudinal method and the cross-sectional method. The experiment was carried out at the Federal University of Lavras, located in the municipality of Lavras, Minas Gerais, Brazil, where 10 crossbred rabbits were evaluated, and animals were weighed from 0 to 150 days of age. Both methods proved to be adequate to describe the development of rabbits and the cross-sectional method proved to be an adequate alternative to obtention of growth curves, saving time in data collection and showing consistent estimates.

A cunicultura é uma atividade com alto potencial de crescimento devido à facilidade em seu manejo e à alta prolificidade, por apresentar baixo impacto poluidor, por se enquadrar bem em sistemas próprios de agricultura familiar, além de produzir carne de alto valor biológico. Diante disso, o objetivo deste trabalho foi avaliar, por meio do modelo não linear de von Bertalanffy, curvas de crescimento de coelhos mestiços de Gigante de Flandres e Nova Zelândia Branco, utilizando-se dois métodos distintos da coleta dos dados: o método longitudinal e o método transversal, a fim de estimar o crescimento do peso em função da idade. O experimento foi realizado na Universidade Federal de Lavras, situado no município de Lavras, Minas Gerais, Brasil. Foram avaliados 10 coelhos mestiços, cuja pesagem foi realizada de 0 a 150 dias de idade. Os dois métodos se mostraram adequados para descrever o crescimento de coelhos, e o método transversal se revelou uma boa alternativa, com ganho de tempo na coleta dos dados e apresentando estimativas consistentes.

Ecotope effect in Triatoma brasiliensis (Hemiptera: Reduviidae) suggests phenotypic plasticity rather than adaptation.

Triatoma brasiliensis (Hemiptera: Reduviidae) is an important vector of Chagas' disease in both sylvatic and peridomestic ecotopes. Discriminating between these populations of Triatominae has been proposed as a means of investigating re-infestation rates of human dwellings. Geometric morphometrics have been widely applied in the study of Triatominae polymorphisms at species and population levels. This study characterizes morphometric differences between sylvatic and peridomestic populations, as well as between sexes in T. brasiliensis specimens from Jaguaruana, Ceará, in northeastern Brazil. No differences in either the shape or size of the cephalic capsule were apparent between sexes or ecotopes. However, the wings showed differentiation in shape and size. Sexual dimorphism was detected, with females presenting significantly higher values and conformations. Size differentiation was also evident, with sylvatic specimens being generally larger than peridomestic examples. These results indicate that differences in the wings of T. brasiliensis may be related to the existence of phenotypic plasticity, and variations in size and shape may be associated with different ecotopes, possibly as a result of conditions in each micro-habitat, such as temperature, relative humidity, food supply and density.

Carbofuran-induced alterations in the energy metabolism and reproductive behaviors of Hyalella castroi (Crustacea, Amphipoda).

Continuous or pulse exposure to pesticides may have negative effects on non-target organisms, resulting in a number of pathological and disturbed biochemical processes, including changes in energy budgets. The objective of this investigation was to examine the potential effects of carbofuran on the biochemical composition (glycogen, proteins, total lipids, triglycerides and cholesterol), levels of lipoperoxidation, Na+/K+ATPase activity, and reproductive behaviors (number of reproductive pairs, ovigerous females, and number of eggs) in the amphipod Hyalella castroi. The amphipods were collected in spring 2007, in the southern Brazilian highlands. In the laboratory, the animals were kept in aquariums under controlled conditions for 7 days, and after this period were exposed to 1 or 10 microg/L of carbofuran for 7 days. After the period of exposure, the animals were immediately frozen for determination of glycogen, proteins, lipids, triglycerides, total cholesterol, levels of lipoperoxidation, and Na+/K+ATPase activity. During each day of culture, reproductive behaviors were observed. Carbofuran induced significant decreases in biochemical reserves (glycogen, proteins, lipids, triglycerides and cholesterol), a significant increase in lipoperoxidation levels, and a decrease in Na+/K+ATPase activity in both males and females. Studies of all the biochemical parameters seem to be quite promising, in order to assess and predict the effects of toxicants on non-target organisms. The results showed that reproductive behaviors may provide sensitive criteria for assessing ecotoxicological effects. H. castroi lives among rooted aquatic macrophytes, and we suggest that it is a sensitive species that could be used in monitoring studies.

Seasonal variations in the biochemical composition of the crayfish Parastacus defossus (Crustacea, Decapoda) in its natural environment.

The crayfish Parastacus defossus occurs in Uruguay and the state of Rio Grande do Sul in Brazil. It lives in swamps and lakes, where it digs sloped subterranean tunnels that are used as burrows. Because there is little information about the biology, physiology and ecology of this species, the aim of this study was to identify the seasonal variations of its carbohydrate and lipid metabolism. Crayfish were collected monthly (from November 2002 to February 2004) in the Lami region, Porto Alegre municipality (30 degrees 11'41''S-51 degrees 06'00''W). Haemolymph samples, used for determination of glucose, total proteins, triglycerides, total cholesterol and total lipids, were collected in the field using potassium oxalate as an anti-clotting agent. The animals and haemolymph samples were immediately frozen in the field. In the laboratory, the hepatopancreas, gills and abdominal muscles were removed for determination of glycogen, triglycerides, total cholesterol and total lipids. The findings suggest that in P. defossus, lipids are an important reserve of energy used during reproduction in both males and females; whereas glycogen may be used during periods of intense activity or environmental stress.

The conservation status of the tuco-tucos, genus Ctenomys (Rodentia: Ctenomyidae), in southern Brazil

The goal of conservation biology should be related to the preservation of species and also to the evolutionary and ecological processes that were responsible to form them and that are still acting. We review the conservation status of the species of tuco-tuco (Ctenomys torquatus, C. lami, C. minutus, and C. flamarioni) from southern Brazil, and relate these data to the geological history of a particular area in that region, the Coastal Plain of the States of Rio Grande do Sul and Santa Catarina. The implications of the data on these species from the Southeastern Brazil are also discussed in relation to the evolution and risk of extinction of these subterranean rodents.

O objetivo da biologia da conservação deve estar relacionado com a preservação das espécies e também com os processos evolutivos e ecológicos que foram responsáveis por sua formação e que continuam ocorrendo. Este trabalho revisa o status de conservação das espécies de tuco-tuco (Ctenomys torquatus, C. lami, C. minutus e C. flamarioni) do sul do Brasil, assim como a relação entre estas informações e a história geológica de uma região de especial importância, a planície costeira dos Estados do Rio Grande do Sul e Santa Catarina. São também discutidas as implicações do conhecimento acumulado sobre as espécies de tuco-tuco no sul do Brasil em relação aos aspectos evolutivos e a ameaça de extinção que estas espécies de roedores subterrâneos sofrem.

Serum cartilage oligomeric matrix protein (COMP) levels in knee osteoarthritis in a Brazilian population: clinical and radiological correlation.

OBJECTIVES: In this study we present data on serum cartilage oligomeric matrix protein (COMP) levels in a Brazilian population with isolated knee osteoarthritis (OA) compared to healthy controls. Clinical and radiological correlations with COMP levels were also evaluated. METHODS: Two hundred and seventy-two patients seen at the Rheumatology Division of the Federal University of São Paulo (UNIFESP) with a symptom of 'pain in the knees' for at least 3 months were invited to participate in this study. History and clinical examination were performed in all patients. Eighty-six patients with clinical isolated knee OA according to the American College of Rheumatology (ACR) criteria and without other causes of pain in the knee were included. Fifty-eight healthy individuals were selected, matched for age and sex, and used as controls. OA evaluation included Lequesne and Western Ontario and MacMaster Universities osteoarthritis index (WOMAC) questionnaires, visual analogue scale (VAS) for pain and standard knee X-rays. Blood samples were taken from all participants and serum COMP levels were measured by enzyme-linked immunosorbent assay (ELISA). OA radiological analysis was performed using the Kellgren and Lawrence (K/L) grading scale. RESULTS: Patients with symptomatic knee OA presented significantly higher serum COMP levels compared to healthy controls and to those with non-symptomatic narrowing of the articular space (p<0.001). Patients with clinical evidence of knee OA and without radiological abnormalities (K/L grade 0 or 1) had intermediate serum COMP levels, significantly higher than those observed in healthy controls (p<0.03). CONCLUSIONS: We observed increased serum COMP levels in patients with symptomatic radiological knee OA. High serum COMP levels may also indicate cartilage damage in selected symptomatic patients without significant radiological abnormalities.

Small mammal populations of an agroecosystem in the Atlantic Forest domain, southeastern Brazil.

This study reports 2 years of the population dynamics and reproduction of a small mammal community using the removal method. The study was conducted in a rural area of the Atlantic Forest, in Sumidouro, Rio de Janeiro State, Brazil. The population sizes, age structure and reproduction were studied for the four most common species in the study area. The overall diversity was 1.67 and ranged between 0.8 to 1.67. The species richness was 13 considering the whole study. The most abundant species were the rodents Nectomys squamipes (n = 133), Akodon cursor (n = 74), Oligoryzomys nigripes (n = 25) and the marsupials Didelphis aurita (n = 58) and Philander frenatus (n = 50). Seven other rodents were captured once: Necromys lasiurus, Akodon montensis, Sooretamys angouya, Oecomys catherine, Oxymycterus judex, Euryzygomatomys spinosus and Trinomys iheringi. There were higher peaks for diversity and species richness during the winter (dry) months, probably due to higher food availability. The marsupials had a seasonal reproduction with highest population sizes at the end of the rainy seasons. Nectomys squamipes reproduced mostly during rainy periods. Akodon cursor reproduced predominantly in the winter with the highest population peaks occurring during this season. The analysis of the population dynamics of the rodent species indicated that no species behaved as an agricultural pest, probably due to the heterogeneous landscape of high rotativity of vegetable cultivation. Rodent populations were more susceptible to the removal procedure than marsupial ones.

Small mammal populations of an agroecosystem in the Atlantic Forest domain, southeastern Brazil

This study reports 2 years of the population dynamics and reproduction of a small mammal community using the removal method. The study was conducted in a rural area of the Atlantic Forest, in Sumidouro, Rio de Janeiro State, Brazil. The population sizes, age structure and reproduction were studied for the four most common species in the study area. The overall diversity was 1.67 and ranged between 0.8 to 1.67. The species richness was 13 considering the whole study. The most abundant species were the rodents Nectomys squamipes (n = 133), Akodon cursor (n = 74), Oligoryzomys nigripes (n = 25) and the marsupials Didelphis aurita (n = 58) and Philander frenatus (n = 50). Seven other rodents were captured once: Necromys lasiurus, Akodon montensis, Sooretamys angouya, Oecomys catherine, Oxymycterus judex, Euryzygomatomys spinosus and Trinomys iheringi. There were higher peaks for diversity and species richness during the winter (dry) months, probably due to higher food availability. The marsupials had a seasonal reproduction with highest population sizes at the end of the rainy seasons. Nectomys squamipes reproduced mostly during rainy periods. Akodon cursor reproduced predominantly in the winter with the highest population peaks occurring during this season. The analysis of the population dynamics of the rodent species indicated that no species behaved as an agricultural pest, probably due to the heterogeneous landscape of high rotativity of vegetable cultivation. Rodent populations were more susceptible to the removal procedure than marsupial ones.

Este estudo reporta dois anos da dinâmica populacional e reprodução de uma comunidade de pequenos mamíferos através de método de remoção. O estudo foi realizado numa área rural na Mata Atlântica, em Sumidouro, Rio de Janeiro, Brasil. Os tamanhos populacionais, a estrutura etária e a reprodução foram estudados para as quatro espécies mais comuns na área de estudo. A diversidade total foi de 1,67 e variou entre 0,8 e 1,67. A riqueza de espécies foi de 13, considerando-se o estudo todo. As espécies mais abundantes foram os roedores Nectomys squamipes (n = 133), Akodon cursor (n = 74) e Oligoryzomys nigripes (n = 25) e os marsupiais Didelphis aurita (n = 58) e Philander frenatus (n = 50). Sete outras espécies de roedores foram capturadas somente uma vez: Necromys lasiurus, Akodon montensis, Sooretamys angouya, Oecomys catherine, Oxymycterus judex, Euryzygomatomys spinosus and Trinomys iheringi. Houve maiores picos de diversidade e riqueza de espécies durante os meses de inverno (secos), provavelmente devido ao aumento na disponibilidade de recursos. Os marsupiais apresentaram reprodução estacional com maiores tamanhos populacionais no final das estações chuvosas. Nectomys squamipes reproduziu-se predominantemente durante períodos chuvosos. Akodon cursor reproduziu-se predominantemente no inverno, com os maiores picos populacionais ocorrendo durante esta estação. A análise da dinâmica populacional das espécies de roedores indicou que nenhuma se comportou como praga agrícola, provavelmente devido ao ambiente heterogêneo de alta rotatividade de cultivos de legumes. As populações dos roedores foram mais suscetíveis ao procedimento de remoção do que as dos marsupiais.

The conservation status of the tuco-tucos, genus Ctenomys (Rodentia: Ctenomyidae), in southern Brazil.

The goal of conservation biology should be related to the preservation of species and also to the evolutionary and ecological processes that were responsible to form them and that are still acting. We review the conservation status of the species of tuco-tuco (Ctenomys torquatus, C. lami, C. minutus, and C. flamarioni) from southern Brazil, and relate these data to the geological history of a particular area in that region, the Coastal Plain of the States of Rio Grande do Sul and Santa Catarina. The implications of the data on these species from the Southeastern Brazil are also discussed in relation to the evolution and risk of extinction of these subterranean rodents.

Seasonal variations in the intermediate metabolism of Aegla platensis (Crustacea, Aeglidae).

This study investigated the effects of circadian and seasonal fluctuations on the intermediate metabolism of the freshwater crustacean Aegla platensis. Individuals were collected each month, at 6:00 h, 12:00 h and 18:00 h, between August 1999 and June 2002 in the Municipality of Taquara, Rio Grande do Sul, Brazil (29 degrees 30'0.2''S and 50 degrees 46'50''W). Anomuran crabs were separated by sex, and samples of haemolymph, hepatopancreas, abdominal muscle, and gills were collected for quantification of glucose, proteins, lipids, triglycerides, and glycogen. No variations were observed in the analyzed metabolic parameters for the different tissues during the different times of day, either for males or females. However, the storage and use of the energetic substrates analyzed did fluctuate seasonally. These results suggest an increase in energy demand, possibly for the production of gametes during summer, incubation and egg laying during autumn and winter, and parental care during spring and summer, respectively. A similar pattern has been observed for other crustaceans.

Intermediate metabolism during the ontogenetic development of Anastrepha fraterculus (Diptera: Tephritidae).

The fruit fly Anastrepha fraterculus is a major pest of native and exotic fruit trees in South America. Changes in weight, water content and metabolism were observed during its ontogenetic development in standard conditions (25 degrees C, RH=60% and 14 h:10 h photoperiod). The metabolic variables glycogen, total proteins, triglycerides and total lipids were measured by means of spectrophotometric methods. The results were correlated with pupae metamorphosis, temporal pattern, and beginning of adult life. Pupae were observed daily, and a sub-sample of 10 individuals was collected and maintained at -20 degrees C. The same procedure was performed with adults at 4 days after adult eclosion. Levels of total lipids and triglycerides were constant during pupal development, peaking in 312-h-old pupae. In 0-h-old pupae, glycogen levels were high, and decreased progressively until the insects were 312 h old. The peak in total proteins coincides with the post-histolysis period of the larval tissue (96-120 h). These results indicated that glycogen and proteins may be the principal sources of energy for metamorphosis. Total lipid and triglyceride contents remained steady during metamorphosis, and these were consumed in the first 4 days of adult life.

A contact map matching approach to protein structure similarity analysis

We modeled the problem of identifying how close two proteins are structurally by measuring the dissimilarity of their contact maps. These contact maps are colored images, in which the chromatic information encodes the chemical nature of the contacts. We studied two conceptually distinct image-processing algorithms to measure the dissimilarity between these contact maps; one was a content-based image retrieval method, and the other was based on image registration. In experiments with contact maps constructed from the protein data bank, our approach was able to identify, with greater than 80% precision, instances of monomers of apolipoproteins, globins, plastocyanins, retinol binding proteins and thioredoxins, among the monomers of Protein Data Bank Select. The image registration approach was only slightly more accurate than the content-based image retrieval approach.