Maladie thromboembolique veineuse chez la femme au service de cardiologie du CHU de Kati / Venous thromboembolic disease in women in the cardiology department of the Kati university hospital

Introduction : La maladie thromboembolique veineuse (MTEV) regroupe : la thrombose veineuse profonde(TVP) et l'embolie pulmonaire(EP).Ce travail a été initié pour identifier les particularités féminines si elles existent. Matériels et Méthode : il s'agissait d'étude rétrospective, descriptive réalisée dans le service de cardiologie du CHU de Kati sur une période allant du 01 janvier 2014 au 31 décembre 2021. Ont été inclues les patientes hospitalisées durant la dite période pour maladie thromboemboliqueveineuse. Les variables étudiées étaient les données sociales démographiques, les facteurs de risque, les paramètres cliniques et paracliniques, les aspects thérapeutiques et évolutifs. Résultats : Au total nous avons enregistré 68 cas de MTEV dont 40 (58,8%) femmes. Il s'agissait 12 (30%) cas de TVP, 25 (62,5%) d'EP et leur association dans 3 (7,5%) cas. La majorité (82,5%) des patientes était des femmes au foyer.Le post partum représentait 10% des cas. La probabilité clinique, selonle score de Wells était élevée chez 93% des TVP, intermédiaire pour les cas d'embolie pulmonaire avec 50%. L'angioscanner révélait que l'embolie pulmonaire était bilatérale dans 80% des cas. L'héparine et l'AVK ont été les plus utilisés. La mortalité était de 7,5%. Conclusion : les femmes sont plus victime des maladies thromboemboliques veineuses que les hommes. Le post partum est une situationparticulière chez la femme. Les récidives ne sont pas rares

Introduction: Venous thromboembolic disease (MTEV) includes: deep venous thrombosis (DVT) and pulmonary embolism (PE).This work was initiated to identify the female particularities if they exist.Materials and Method: This was a retrospective, descriptive study conductedin the cardiology department of the Kati university hospital over a period from January 01, 2014 to December 31, 2021.Patients hospitalized during the period for venousthromboembolic disease were included.The variables studied were demographic social data, risk factors, clinical and para-clinical parameters, therapeutic and evolutionary aspects. Results: In total we recorded 68 cases of MTEV of which 40 (58.8%) women. There were 12 (30%) cases of deep vein thrombosis, 25 (62.5%) cases of pulmonary embolism and their association in 3 (7.5%) cases.The majority (82.5%) of patients were housewives.Thepostpartum accounted for 10% of cases.The clinical probability according to the Wells score was high in 93% of deep vein thrombosis, intermediate for cases of pulmonary embolism with 50%.Angio-CT showed that pulmonary embolism was bilateral in 80% of cases. Heparin and anti-vitamin K were the most commonly used. Mortality was 7.5%. Conclusion: women are more victims of venous thromboembolic diseases than men. Postpartum is a special situation for women. Recurrences are not uncommon

Second-line antiretroviral therapy failure and characterization of HIV-1 drug resistance patterns in children in Mali.

INTRODUCTION: In recent years, children born to HIV-infected mothers have been receiving antiretroviral treatment (ART) with limited or no virologic monitoring, which increases the likelihood of development and accumulation of drug resistance mutations, which itself may limit the effectiveness of future ART. The objective of this study was to evaluate the prevalence of resistance mutations in children infected with HIV-1 experiencing virological failure to second-line ART in the Pediatric Department of Gabriel Touré Hospital in Mali. METHODS: Children aged from 5 to 18 infected with HIV-1 on second-line antiretroviral therapy and whose viral load was greater than 1000 copies/mL after observance reinforcement were enrolled. The protease and reverse transcriptase genes were sequenced with ViroSeq®. The results were interpreted according to the last version of the Stanford algorithm in 2018. The study was approved by the Ethics Committee of the Faculty of Medicine and Dentistry, University of Sciences, Techniques and Technologies of Bamako (Mali). RESULTS: Of 216 children, 33 (15.3%) who had a viral load (VL)>1000 copies/mL in second line were recruited and included in the study. The median plasma viral load was 77,000 copies/mL [IQR (28,000-290,000)] and the median CD4 cell count was 310 cells/mm3 [IQR (152-412)]. The median age was 12 years; 48.5% of patients were treated with a combination of stavudine/lamivudine/nevirapine (Triomune®) for first-line treatment and 60.6% with abacavir/lamivudine/lopinavir/ritonavir for the second-line ART. The median treatment duration was 8.5 years [range, 3-13]. Of the 33 children whose treatment failed, the predominant HIV-1 subtype was CRF02_AG (66.7%). The prevalence of resistance to ART classes was 60.61% (20/33) to nucleoside reverse transcriptase inhibitors (NRTIs), 54.51% (18/33) to nonnucleoside reverse transcriptase inhibitors (NNRTIs), and 51.52% (17/33) to protease inhibitors (PIs). Of the patients studied, 90.9% were exposed to lopinavir/ritonavir (LPV/r) but only 15.2% (5/33) developed resistance to LPV/r. CONCLUSIONS: This study demonstrated that LPV/r remains active in most patients after second-line ART failure. In children whose second-line ART fails, particular attention should be paid to their ART and adherence history when considering the next treatment option.

Pronostic des accidents thromboemboliques et hémorragiques sous AVK dans le service de cardiologie du CHU mère-enfant « Le Luxembourg »

But. Décrire la prise en charge des accidents thromboemboliques, hémorragiques sous AVK et décrire leur pronostic à court terme dans le service de cardiologie du CHU Mère-Enfant « le Luxembourg ». Matériels et méthodes. Il s'agit d'une étude transversale effectuée sur les patients hospitalisés ou suivis en ambulatoire, sous AVK et présentant une complication hémorragique ou thromboembolique, dans la période allant du 1er octobre 2017 au 30 juillet 2018, dans le service de cardiologie du CHUME. Les données ont été recueillies à l'aide des fiches d'enquête, au chevet des malades hospitalisés et au cours des visites de contrôle. Résultats. L'étude a porté sur 27 patients. Le risque thromboembolique a été important dans 78 % des cas, avec un risque hémorragique faible dans tous les cas. La fluindione a été la molécule la plus utilisée, avec un taux de 67 % et l'INR a été instable dans 89 % des cas. Quarante-un pourcent (41 %) des accidents hémorragiques et 60 % des accidents thromboemboliques ont été constatés au cours de la troisième semaine du traitement anticoagulant. Des accidents hémorragiques ont été notés dans 81 % des cas et leur prise en charge a été assurée par la vitamine K1, dans 63 % des cas. Il a été noté des embolies cérébrales dans 80 % des cas et leur prise en charge a été intégralement assurée par l'HBPM. Finalement, l'évolution des accidents sous traitement a été favorable dans 70 % des cas. Conclusion. Il a été donc constaté que les accidents hémorragiques et thromboemboliques sont survenus le plus souvent au cours de la troisième semaine du traitement anticoagulant et dans des proportions importantes. La prise en charge des accidents hémorragiques ; par la vitamine K, et des accidents emboliques ; par les HBPM, a permis d'obtenir généralement une évolution favorable

Resistance profile and treatment outcomes in HIV-infected children at virological failure in Benin, West Africa.

Background: In Africa a high percentage of HIV-infected children continue to experience HIV treatment failure despite enormous progress. In Benin (West Africa), there are currently no data on HIV drug resistance at failure in paediatric populations. Objectives: To assess the frequency and patterns of HIV drug resistance among children with virological ART failures. Methods: Dried blood spots from 62 HIV-infected children with virological failure were collected at the paediatric clinic of the National Hospital Center in Cotonou for genotyping and plasma drug concentration determination. Results: Characteristics of the population show a median age of 10 years (IQR 6-13) and a median duration on ART of 5 years (IQR 3-7). Viruses from 53 children were successfully amplified. Of these, 76% of patients were on an NNRTI-based regimen and 24% on a boosted PI-based regimen. NRTI, NNRTI and dual-class resistance was present in 71%, 84% and 65% of cases, respectively. Only 4% of the children had major resistance mutations to PIs and none had major resistance mutations to integrase inhibitors. Among the participants, 25% had undetectable antiretroviral concentrations. Conclusions: Our results showed that the development of drug resistance could be one of the main consequences of high and continuous viral replication in HIV-infected children in Benin. Thus, inadequate attention to monitoring lifelong ART in children may prevent achievement of the goal of the United Nations Program on HIV and AIDS (UNAIDS) of 90% viral suppression among patients receiving ART.

Prevalence and clinical impact of minority resistant variants in patients failing an integrase inhibitor-based regimen by ultra-deep sequencing.

Background: Integrase strand transfer inhibitors (INSTIs) are recommended by international guidelines as first-line therapy in antiretroviral-naive and -experienced HIV-1-infected patients. Objectives: This study aimed at evaluating the prevalence at failure of INSTI-resistant variants and the impact of baseline minority resistant variants (MiRVs) on the virological response to an INSTI-based regimen. Methods: Samples at failure of 134 patients failing a raltegravir-containing (n = 65), an elvitegravir-containing (n = 20) or a dolutegravir-containing (n = 49) regimen were sequenced by Sanger sequencing and ultra-deep sequencing (UDS). Baseline samples of patients with virological failure (VF) (n = 34) and of those with virological success (VS) (n = 31) under INSTI treatment were sequenced by UDS. Data were analysed using the SmartGene platform, and resistance was interpreted according to the ANRS algorithm version 27. Results: At failure, the prevalence of at least one INSTI-resistant variant was 39.6% by Sanger sequencing and 57.5% by UDS, changing the interpretation of resistance in 17/134 (13%) patients. Among 53 patients harbouring at least one resistance mutation detected by both techniques, the most dominant INSTI resistance mutations were N155H (45%), Q148H/K/R (23%), T97A (19%) and Y143C (11%). There was no difference in prevalence of baseline MiRVs between patients with VF and those with VS. MiRVs found at baseline in patients with VF were not detected at failure either in majority or minority mutations. Conclusions: UDS is more sensitive than Sanger sequencing at detecting INSTI MiRVs at treatment failure. The presence of MiRVs at failure could be important to the decision to switch to other INSTIs. However, there was no association between the presence of baseline MiRVs and the response to INSTI-based therapies in our study.

[High prevalence of methicillin-resistant Staphylococcus aureus strains in the Point G teaching hospital in Bamako, Mali]. / Haute prevalence des souches de staphylococcus aureus resistantes a la meticilline au centre hospitalier universitaire du Point G a Bamako (Mali).

Our aim was to study the susceptibility of Staphylococcus aureus to antimicrobial agents and to determine the methicillin-resistant S. aureus (MRSA) prevalence in the Point G teaching hospital in Bamako. METHODS: Columbia blood agar with nalidixic acid and colistin was used for the isolation of S. aureus strains. The diffusion method was used for antimicrobial susceptibility testing. RESULTS: Of 434 non repetitive strains of S. aureus isolated from 2007 to 2009 in the Point G teaching hospital, 297 (68.6%) were from hospital area and 137 (31.4%) were from extra-hospital area. The hospital strains were more resistant to penicillin than the extra-hospital strains (95% versus 88%; p = 0,016). Tetracycline was more active against hospital clinical isolates than extra-hospital clinical isolates (32% versus 21%; p = 0.024). Among 297 S. aureus clinical isolates, 195 (66%) were MRSA and 102 (34%) were methicillin-susceptible S. aureus (MSSA). The MRSA clinical isolates prevalence was higher in hospital area than in extra-hospital area (66% versus 55.5%; p = 0.0418). The MRSA clinical isolates prevalence was higher in the medical wards than in the surgical wards (74.8% vs 34.3%; p < 10-6). Among 251 MRSA clinical isolates, 169 (67.3%) were from urine, 39 (15.5%) from pus, 30 (12%) from blood culture, 7 (2.9%) from vagina and 6 (2.5%) from other sites. The MRSA clinical isolates prevalence was 46% in 2007, 63% in 2008 and 80% in 2009. The MRSA clinical isolates were highly more resistant to penicillin (p < 10-6), to amoxicillin combined with clavulanic acid (p < 10-6), to aminoglycosides (p < 10-6), to macrolides, lincosamides and streptogramins (p < 10-6), to norfloxacin (p < 10-6), to chloramphenicol (p < 10-6), to tetracycline (p = 0,0042), to sulfonamides (p < 10-6), to trimethoprim (p < 10-6), to fusidic acid (p < 10-6), and to fosfomycin (p = 0,0103) than the MSSA strains. The high level resistance to aminoglycosides, fluoroquinolones, macrolides, lincosamides and streptogramins was more frequent in the MRSA strains than in the MSSA strains. CONCLUSION: The MRSA clinical isolates prevalence was very high in the Point G teaching hospital in Bamako, in the medical wards especially. The MRSA strains were drugs multiple resistant.

Notre objectif était d'étudier la sensibilité de Staphylococccus aureus aux antibiotiques et de déterminer la prévalence des souches résistantes à la méticilline au centre hospitalier universitaire du Point G à Bamako. MÉTHODES: L'isolement des souches de S. aureus a été réalisé sur la gélose Columbia additionnée de sang de mouton, d'acide nalidixique et de colistine. L'étude de la sensibilité aux antibiotiques a été faite par la méthode des disques. RÉSULTATS: Sur 434 souches non répétitives de S. aureus isolées de 2007 à 2009 au centre hospitalier universitaire du Point G, 297 (68,6 %) sont d'origine hospitalière et 137 (31,4 %) d'origine extrahospitalière. Les souches hospitalières ont été plus résistantes à la pénicilline G que les souches extrahospitalières (95 % versus 88 %; p = 0,016). La résistance de S. aureus à la méticilline (SARM) a été plus fréquente chez les souches hospitalières que chez les souches extrahospitalières (66 % versus 55,5 %; p = 0,0418). Les plus hautes prévalences de SARM ont été observées dans les services de néphrologie (90 %), de cardiologie (87,5 %) de médecine interne (71 %), d'hématologie-oncologie médicale (66 %) et des maladies infectieuses (65 %). La prévalence des souches de SARM a été de 46 % en 2007, 63 % en 2008 et 80 % en 2009 en milieu hospitalier. Les souches de SARM ont été plus résistantes à la pénicilline G (p < 10−6), à l'association amoxicilline + acide clavulanique (p < 10−6), aux aminosides (p < 10−6), aux macrolides, lincosamides et streptogramines (p < 10−6), à la norfloxacine (p < 10−6), au chloramphénicol (p < 10−6), à la tétracycline (p = 0,0042), aux sulfamides (p < 10−6), au triméthoprime (p < 10−6), à l'acide fusidique (p < 10−6), et à la fosfomycine (p = 0,0103) que les souches de S. aureus sensibles à la méticilline (SASM). Les phénotypes de résistance aux aminosides (KTG, S+ KTG) et aux macrolides, lincosamides et streptogramines (MLSB constitutif) ont été plus fréquents chez les souches de SARM que chez celles de SASM. CONCLUSION: La prévalence des souches de SARM a été très élevée au centre hospitalier universitaire du Point G, dans les services de médecine surtout. Les souches de SARM sont multirésistantes.

Intérêt et limite de la prédiction de l'anémie fœtale par la mesure du pic systolique de vélocité dans l'artère cérébrale moyenne. A propos d'un cas d'anémie fœtale d'origine mixte

Objectif : Le but de notre travail était de décrire les difficultés diagnostiques et thérapeutiques d'un cas d'anémie fœtale dans un contexte mixte d'allo-immunisation anti-Rhésus D et d'infection materno-fœtale à cytomégalovirus (CMV).Observation : Nous rapportons un cas de grossesse avec allo-immunisation anti-D+C au cours de laquelle les mesures du pic systolique de vélocité de l'artère cérébrale moyenne n'ont jamais dépassé le seuil de 1,5 MoM (multiple de la médiane) justifiant habituellement une cordocentèse pour une transfusion in utero. L'issue néonatale a été marquée par une anémie importante à 8,2 g/dl avec transfusion sanguine ainsi que le diagnostic post-natal d'une transmission materno-fœtale d'infection à cytomégalovirus. Ce cas pose la question de la valeur du pic systolique de vélocité de l'artère cérébrale moyenne (PSV-ACM) fœtale dans les anémies d'origine autre que l'allo-immunisation érythrocytaire.Conclusion : La mesure du PSV-ACM reste une méthode efficace et non-invasive pour le diagnostic des anémies par allo-immunisation. Cependant, il n'est pas actuellement évalué pour le dépistage de l'anémie par infection à CMV. Une vigilance particulière est donc indispensable dans les anémies fœtales d'origine mixte

Performance of genotypic algorithms for predicting tropism of HIV-1CRF02_AG subtype.

BACKGROUND: Several genotypic rules for predicting HIV-1 non-B subtypes tropism are commonly used, but there is no consensus about their performances. OBJECTIVES: Three genotypic methods were compared for CRF02_AG HIV-1 tropism determination. STUDY DESIGN: V3 env region of 178HIV-1 CRF02_AG from Pitié-Salpêtrière and Saint-Antoine Hospitals was sequenced from plasma HIV-1 RNA. HIV-1 tropism was determined by Geno2Pheno algorithm, false positive rate (FPR) 5% or 10%, the 11/25 rule or the combined criteria of the 11/25 and net charge rule. RESULTS: A concordance of 91.6% was observed between Geno2pheno 5% and the combined criteria. The results were nearly similar for the comparison between Geno2pheno 5% and the 11/25 rule. More mismatches were observed when Geno2pheno was used with the FPR 10%. A lower nadir CD4 cell count was associated with a discordance of tropism prediction between Geno2pheno 5% and the combined criteria or the 11/25 rule (p=0.02 and p=0.03, respectively). A lower HIV-1 viral load was associated with some discordance for the comparison of Geno2pheno 10% and the combined rule (p=0.02). CONCLUSION: Geno2pheno FPR 5% or 10% predicted more X4-tropic viruses for this set of CRF02_AG sequences than the combined criteria or the 11/25 rule alone. Furthermore, Geno2pheno FPR 5% was more concordant with the 11/25 rule and the combined rule than Geno2pheno 10% to predict HIV-1 tropism. Overall, Geno2pheno 5% could be used to predict CRF02_AG tropism as well as other genotypic rules.

High level of HIV-1 resistance in patients failing long-term first-line antiretroviral therapy in Mali.

OBJECTIVES: In resource-limited settings, few data are available on virological failure after long-term first-line antiretroviral therapy. This study characterized the genotypic resistance patterns at the time of failure after at least 36 months of a first-line regimen in Mali, West Africa. METHODS: Plasma samples from 84 patients who were receiving first-line antiretroviral treatment and with an HIV-1 RNA viral load (VL) >1000 copies/mL were analysed. Genotypic resistance testing was performed and HIV-1 drug resistance was interpreted according to the latest version of the National Agency for HIV and Hepatitis Research algorithm. RESULTS: At the time of resistance testing, patients had been treated for a median of 60 months (IQR 36-132 months) and had a median CD4 cell count of 292 cells/mm(3) (IQR 6-1319 cells/mm(3)), a median HIV-1 RNA level of 28266 copies/mL (IQR 1000-2 93 495 copies/mL) and a median genotypic susceptibility score of 1 (IQR 1-4). The prevalence of nucleoside reverse transcriptase inhibitor (NRTI) and non-nucleoside reverse transcriptase inhibitor (NNRTI) resistance mutations was 78% and 82%, respectively. Viruses were resistant to at least one drug in 92% of cases. Although etravirine and rilpivirine were not used in the first-line regimens, viruses were resistant to etravirine in 34% of cases and to rilpivirine in 49% of cases. The treatment duration, median number of NRTI and NNRTI mutations and some reverse transcriptase mutations (T215Y/F/N, L210W, L74I, M41L and H221Y) were associated with the VL at virological failure. CONCLUSIONS: This study demonstrated a high level of resistance to NRTIs and NNRTIs, compromising second-generation NNRTIs, for patients who stayed on long-term first-line regimens. It is crucial to expand the accessibility of virological testing in resource-limited settings to limit the expansion of resistance and preserve second-line treatment efficacy.

Rilpivirine, emtricitabine and tenofovir resistance in HIV-1-infected rilpivirine-naive patients failing antiretroviral therapy.

OBJECTIVES: In the context of simplification strategies, it is essential to know the feasibility of a switch to a rilpivirine-based therapy. The aim of this study was to describe rilpivirine, tenofovir and emtricitabine resistance in HIV-1-infected patients who experienced virological failure during their previous antiretroviral treatment. PATIENTS AND METHODS: The studied population included two groups of patients, all rilpivirine naive, tested for resistance by bulk sequencing from 2008 to 2011: the first group (n = 998) failing a nucleoside reverse transcriptase inhibitor (NRTI) plus boosted protease inhibitor (PI)-based regimen and the second group (n = 3733) failing an NRTI plus non-nucleoside reverse transcriptase inhibitor (NNRTI)-based regimen. RESULTS: In the first group, the frequency of rilpivirine mutations and resistance to rilpivirine (5.1%) was similar to that in antiretroviral-naive HIV-1-infected patients. Among the 1605 patients from the second group with at least one NNRTI mutation in their HIV, the prevalence of viruses 'resistant' or 'possibly resistant' to efavirenz, nevirapine and etravirine was 78%, 79% and 74%, respectively, while 59% were resistant to rilpivirine. Resistance to rilpivirine was significantly more frequent in non-B subtype versus B subtype viruses. Among pretreated patients with viruses with at least one NNRTI mutation (other than for rilpivirine), 22% of sequences were susceptible to the combination rilpivirine/emtricitabine/tenofovir disoproxil fumarate. CONCLUSIONS: In patients failing an NRTI plus NNRTI-based regimen, to know the feasibility of a switch to rilpivirine/emtricitabine/tenofovir disoproxil fumarate, reliable resistance information should be available at the time of use of concurrent NNRTI therapy.

Genetic barrier to the development of resistance to rilpivirine and etravirine between HIV-1 subtypes CRF02_AG and B.

OBJECTIVES: It has been demonstrated for some drugs that the genetic barrier, defined as the number of genetic transitions and/or transversions needed to produce a resistance mutation, can differ between HIV-1 subtypes. We aimed to assess differences in the genetic barrier for the evolution of resistance to the second-generation non-nucleoside reverse transcriptase inhibitors etravirine and rilpivirine in subtypes B and CRF02_AG in antiretroviral-naive patients. METHODS: An analysis was undertaken of 25 substitutions associated with etravirine and rilpivirine resistance at 12 amino acid positions in 267 nucleotide sequences (136 HIV-1 B and 131 HIV-1 CRF02_AG subtypes) of the reverse transcriptase gene. RESULTS: The majority (7/12) of amino acid positions studied were conserved between the two HIV-1 subtypes, leading to a similar genetic barrier. Different predominant codons between the subtypes were observed in 5/12 positions (90, 98, 179, 181 and 227), with an effect on the calculated genetic barrier only at the V179D and V179F codons (2.5 versus 3.5 for V179D, and 2.5 versus 5 for V179F, respectively, for subtype B versus subtype CRF02_AG). CONCLUSIONS: The majority of amino acids involved in etravirine and rilpivirine resistance showed a high degree of conservation of the predominant codon between the B and CRF02_AG subtypes. For rilpivirine, the genetic barrier was the same between the two subtypes. Nevertheless, subtype CRF02_AG showed a higher genetic barrier to acquiring mutations V179D and V179F (mutations associated with resistance to etravirine) compared with subtype B, suggesting that it would be more difficult to produce resistance to etravirine in the CRF02_AG subtype than the B subtype.

[Entomological evaluation of the risk of urban outbreak of yellow fever in 2008 in Abidjan, Côte d'Ivoire]. / Évaluation entomologique du risque d'épidémie urbaine de fièvre jaune survenue en 2008 dans le district d'Abidjan, Côte d'Ivoire.

In April 2008, seven years after the outbreak of 2001, Abidjan faced another epidemic of yellow fever. Three weeks after the case detected in the commune of Treichville at 28(th) of April 2008, two other cases were notified, the first one in Port-Bouet and the second one in Cocody located respectively in the south and north of the city of Abidjan. In order to determine a large-scale risk of urban yellow fever epidemic, epidemiological and entomological investigations were conducted by the Ministry of Health and Public Hygiene of Cote d'Ivoire with the support of the Global Outbreak Alert and Response Network. Entomological investigations revealed the predominance of Aedes ægypti, urban vector of yellow fever in neighborhood visited with larval density indices between 2 and 5, indicating the existence of a sufficient density of the vector for cause an explosion of the epidemic. In fact, the massive influx of people from inside cities towards Abidjan caused by the socio-political crisis occurred in the country in 2002, the deterioration of environment with the creation of more breeding sites of Ae. ægypti as corollary and the circulation of the virus at mosquito level were many factors favorable to the yellow fever outbreak in Abidjan city.

Prevalence of pre-existing resistance-associated mutations to rilpivirine, emtricitabine and tenofovir in antiretroviral-naive patients infected with B and non-B subtype HIV-1 viruses.

OBJECTIVES: The prevalence of rilpivirine, emtricitabine and tenofovir resistance-associated mutations (RAMs), described in vitro and in vivo, was determined in antiretroviral-naive patients. PATIENTS AND METHODS: From 2008 to 2011, 1729 treatment-naive patients were tested for resistance by bulk sequencing. We studied the primary rilpivirine RAMs (K101E/P, E138A/G/K/Q/R, V179L, Y181C/I/V, H221Y, F227C and M230I/L) and other potential rilpivirine-associated mutations (V90I, L100I, K101T, E138S, V179D/I, Y188L, V189I, G190A/E/S and M230V). We also studied the M184V/I and K65R mutations for emtricitabine and tenofovir, respectively. RESULTS: Among 1729 sequences, half of patients had B-subtype viruses and the other half non-B (with 26.7% CRF02, n=461). Primary rilpivirine RAMs were infrequent (4.6%, n=79) and the most prevalent were E138A (3%, n=52), E138K, (0.3%, n=5), H221Y (0.3%, n=5), E138G (0.2%, n=4) and Y181C (0.2%, n=4). The frequency of the primary rilpivirine RAMs was similar between B and non-B subtypes. The other potential rilpivirine-associated mutations that were most prevalent were V179I (8.4%, n=145), V90I (3.8%, n=65) and V189I (2.3%, n=40). The common V179I, V189I and V90I polymorphisms have not been associated with virological failure in Phase 3 clinical studies. By the ANRS algorithm, 4.9% (n=84) of samples were resistant to rilpivirine, 3.7% (n=32) of B-subtype viruses versus 6% (n=52) of non-B-subtype viruses (P=0.02, χ(2) test). The prevalence of K65R and M184I/V was 0.06% (1/1729) and 1% (18/1729), respectively. The prevalence of K103N was 2% (35/1729). CONCLUSIONS: The prevalence of rilpivirine, emtricitabine and tenofovir resistance mutations was very low in antiretroviral-naive patients. The prevalence of resistance to rilpivirine (4.9%, n=84) was not statistically different from the prevalence of efavirenz and nevirapine resistance in our population.

[Culex quinquefasciatus sensitivity to insecticides in relation to the urbanization level and sewage water in Yopougon, a township of Abidjan (Côte-d'Ivoire)]. / Sensibilité de Culex quinquefasciatus aux pyréthrinoïdes en relation avec le niveau d'urbanisation et l'évacuation des eaux usées dans la commune de Yopougon à Abidjan (Côte-d'Ivoire).

This survey, conducted from July 2003 to June 2004, was to assess the variation of the level of sensitivity of Cx. quinquefasciatus to the pyrethroids recommended for the impregnation of the mosquito nets, in the township of Yopougon situated in the Northwest of Abidjan city in relation with the bed of a drainage channel of sewage water that passes through the township from the north to the south. Five districts have been chosen along this channel according to the level of urbanization, for the withdrawal of the pre-imaginal populations of Cx. quinquefasciatus in collections of stagnant sewage water of this township. The female Cx. quinquefasciatus aged three to five days from the exits of the insectarium have been exposed to papers impregnated with deltamethrin 0.05%, permethrin 1% and DDT 4% in view of the diagnosis of a possible resistance of these populations to these insecticides. The populations of Cx. quinquefasciatus proved to be resistant to the three insecticides used, in four districts. On the other hand, the population of Cx. quinquefasciatus from the district "Zone industrielle," situated upstream of the channel, proved to be sensitive to permethrin 1%, and a drastic decrease of sensitivity of the same mosquito has been observed with deltamethrin 0.05% and DDT 4%.

[Knowledge and attitudes of medical personnel in blood transfusion in Bamako, Mali]. / Connaissances et attitudes du personnel médical en matière de transfusion sanguine au Mali.

PURPOSE OF THE STUDY: We undertook a study to determine the level of knowledge and practice of medical staff personnel on transfusion medicine in Mali at Bamako and Kati. PATIENTS AND METHODS: The study was conducted from January to April 2010 in the three main teaching hospitals of Bamako and Kati and in the six referral health centers of the district of Bamako. Medical staff knowledge and practice were assessed using a questionnaire. The study population consisted of specialized practitioners (15%), general practitioners (21.4%), nurses (41.6%), and midwives (22%). RESULTS: Overall, 70.9% of the staff did not receive any training in blood transfusion since their graduation. The general knowledge about blood transfusion was insufficient in 53.9% of staff and excellent in 46.1%. Only 42.9% of medical staff has a good basic knowledge of blood products, their indications, and related accidents. CONCLUSION: Our study showed weaknesses in the transfusion system in Bamako, with insufficient knowledge of the medical staff in blood transfusion and little experience.

[Resistance of Anopheles gambiae s.l. to pyrethroids and DDT at Tiassalékro, an irrigated rice-growing village in the southern forest of Ivory Coast]. / Résistance d'Anopheles gambiae s.l. aux pyréthrinoïdes et au DDT à Tiassalékro, village de riziculture irriguée en zone sud forestière de Côte-d'Ivoire.

An assessment of the sensitivity of Anopheles gambiae s.l.to three pyrethroids (alphacypermethrin, permethrin, deltamethrin) and DDT has been carried out with a laboratory strain (Kisumu reference sensitive strain) and a wild strain (Tiassalékro strain) using larvae from an irrigated rice-growing area of Tiassalékro, located in the southern forest of Ivory Coast. The sensitivity tests were performed according to the standard WHO cylinder tests with adult female A. gambiae s.l. aged 2 to 4 days. The results showed that the strain of Tiassalékro is resistant to the three tested pyrethroids and DDT. The molecular forms M and S were identified, with a predominance of M form. The resistance mechanism involved is the Kdr mutation. In this region, control measures against malaria vectors by using bed nets impregnated with these insecticides or household sprays could be compromised.

[Entomological investigations conducted around ten cases of yellow fever in 2009 in the Denguélé sanitary region, Côte-d'Ivoire]. / Investigations entomologiques menées autour de dix cas de fièvre jaune survenus en 2009 dans la région sanitaire du Denguélé, Côte-d'Ivoire.

In November 2009, ten suspicious cases of yellow fever, including six deaths, were notified in the region of Denguélé, in the northwest of Côte-d'Ivoire. In order to evaluate the extent of yellow fever virus circulation and the risk for local people, a mission of entomological investigation was carried out by the Ministry of Health and Public Hygiene of Côte-d'Ivoire. Entomological investigations were conducted in the villages of confirmed cases (Banakoro and Tron-Touba) and the centers of consultation and hospitalization of cases during illness. Breteau index and recipient index were quasi nil. Aedes aegypti was absent among the captured mosquitoes. On the other hand, Aedes luteocephalus and Aedes opok were present at Banakoro and Tron-Touba with respective average biting rates of 0.8 and 0.6 bite/man/twilight. This situation of epidemic in the northwest of Côte-d'Ivoire could be explained by the deterioration of Denguélé region's health system which is a consequence of the war started in the country in 2002 and which has lowered the immunity of the population.

[Malaria transmission in lagoon areas in Côte d'Ivoire: the villages of N'gatty and Allaba]. / Transmission des plasmodies humaines dans les villages de N'gatty et d'Allaba en milieu lagunaire de Côte d'Ivoire.

The ecological and climatic variations in tropical areas of Africa make the transmission of malaria very heterogeneous. Several species of mosquitoes of the Anopheles genus transmit the disease. In Côte d'Ivoire, studies in the southern and northern forests have shown the involvement of Anopheles gambiae, An. funestus and An. nili in this transmission. This study was conducted in N'gatty and Allaba, two villages in a lagoon area of southern Côte d'Ivoire, in the district of Dabou. The district is located between 05 degrees 18 N and 04 degrees 27 W, about 40 kilometres from the economic capital of Côte d'Ivoire, and has a surface of 2257.8 km2. Two lagoon villages, N'gatty and Allaba, about a kilometre apart, were selected as sites for this research. The topography of N'gatty is rugged, with two important sides: a banana plantation on the west and the lagoon on the east, covered by aquatic plants (Pistia stratiotes, Acrosticum aureum, nympheacae and Eichhornia crassipes). This aquatic vegetation separates the last plots of the village from the lagoon. Mosquito populations were sampled from December 2007 through September 2008 by nighttime captures on volunteers three consecutive nights each month, inside six living rooms (4 in N'gatty and 2 in Allaba, a smaller village). The mosquitoes were captured when they landed on the volunteer's legs. There were two teams of catchers for each home; the first worked from 18:00 h to 24:00 and the second from 24:00 to 06:00. The ovaries and glands of An. gambiae were dissected. The physiological age of the females was determined by the appearance of the trachea on ovarian dissection. The sporozoites were sought by optic microscopy in cooled glands in a drop of physiological salt solution. During the 10 months of this study, 21 137 mosquitoes were caught in N'gatty and 7163 in Allaba. An. gambiae species accounted for less than 2% of the mosquito fauna in the two villages. Overall, the average bite rate was 203.24 bites per man per night (b/m/n) in N'gatty and 137.75 in Allaba. The average number of An. gambiae bites was 4.04 b/m/n in N'gatty and 2 b/m/n in Allaba. Annually, the average An. gambiae bites totalled 1474.6 bites per man per year (b/m/y) in N'gatty and 730 in Allaba. No An. funestus mosquito was caught in Allaba, and its average number of bites per man per year in N'gatty was only 3.65. No infected glands (n = 420 dissected) were found in N'gatty throughout the investigation. The mean sporozoite rate in Allaba was only 0.285% (n = 104). The mean entomological inoculation rate (EIR) was estimated at 0.017 infecting bites per man and per night (ib/m/n) in N'Gatty and 6.2 in Allaba. This weak entomological inoculation rate leads us to consider continuing the research for infection of An. gambiae by ELISA techniques. In conclusion, malaria transmission by An. gambiae in this area is very low.

[Specific diversity and culicidian nuisance in the villages of N'gatty and Allaba in laguna area of Ivory Coast]. / Diversité spécifique et nuisance culicidienne dans les villages de N'gatty et d'Allaba en milieu côtier lagunaire de Côte-d'Ivoire.

Entomological surveys were undertaken between June and December 2006 in N'gatty and Allaba. These villages are located in southern Ivory Coast in a laguna area in Dabou department. In these villages, there are large swampy areas, which have caused the multiplication of anthropophilic Culicidae. Mosquitoes have been collected at preimaginal stage at the time of the larval prospecting and at adult stage through human landing catch. Larval collections have been made using the classic method of "dipping". Larvae have been identified to the genus level. Then, they have been bred in the laboratory to identify adults. Adults collection has been made once a month during three consecutive nights by human landing catch inside houses. Adults have been identified to the specific level. Eight genera of mosquitoes have been collected in these two villages: Aedes, Anopheles, Coquillettidia, Culex, Eretmapodites, Mansonia, Toxorhynchites and Uranotaenia. Twenty-four species have been listed during this stu y. The genus Mansonia is the most predominant with 86% (N = 15,811) and 80% (N = 1,385), respectively, in N'gatty and Allaba. The average biting rate per day varies between N'gatty and Allaba. It is estimated to 308 bites per human per night (b/h/n) in N'gatty and 72 b/h/n in Allaba. In these villages, mosquito nuisance is mainly due to Mansonia with 264 b/h/n and 58 b/h/n, respectively, in N'gatty and Allaba. However, Anopheles gambiae s.l. average rate was 12 b/h/n in N'gatty and 2 b/h/n in Allaba.

[Malaria transmission in Tiassalékro, a irrigated rice growing village situated in the South forest area of Côte d'Ivoire]. / Transmission du paludisme a Tiassalèkro, village de riziculture irriguèe situé en zone sud forestière de Côte d'Ivoire.

A longitudinal entomological study was carried out from January to June 2007 in the rice-growing area of Tiassaékro, a village located in the forest, South of Côte d'Ivoire. The study was based on samples of mosquitoes caught on human volunteers indoors and outdoors. During the 6 months of the study 29481 female mosquitoes were caught. The average biting rate was 272.9 bites per man per night (b/m/n). An. gambiae was the most predominant with 79.1% of mosquitoes caught. The average biting rate of An. gambiae was of 216 b/m/n. The biting activity of this species was noticed between 8 p.m. and 6 a.m. The estimated average sporozoite index was 0.32% (n = 3423 dissected). The inoculation rate was 0.69 ib/m/n with the highest rate (1.99 ib//n) recorded in April. The entomological parameters of the transmission are influenced by the different stages of rice growing.