A multi-taxon analysis of European Red Lists reveals major threats to biodiversity.

Biodiversity loss is a major global challenge and minimizing extinction rates is the goal of several multilateral environmental agreements. Policy decisions require comprehensive, spatially explicit information on species' distributions and threats. We present an analysis of the conservation status of 14,669 European terrestrial, freshwater and marine species (ca. 10% of the continental fauna and flora), including all vertebrates and selected groups of invertebrates and plants. Our results reveal that 19% of European species are threatened with extinction, with higher extinction risks for plants (27%) and invertebrates (24%) compared to vertebrates (18%). These numbers exceed recent IPBES (Intergovernmental Platform on Biodiversity and Ecosystem Services) assumptions of extinction risk. Changes in agricultural practices and associated habitat loss, overharvesting, pollution and development are major threats to biodiversity. Maintaining and restoring sustainable land and water use practices is crucial to minimize future biodiversity declines.

Atlantor, a new generic name for Barbus reinii Günther, 1874 from Morocco(Teleostei: Cyprinidae).

Atlantor, new genus, is proposed for Barbus reinii from the Atlantic basin in Morocco. The sole species of the genus is clearly separated from related genera based on its phylogenetic position, and from Carasobarbus, Mesopotamichthys and Pterocapoeta in its morphological characters. Atlantor was previously included in Labeobarbus, making this genus paraphyletic with respect to several genera from Western Asia and North Africa. With the description of Atlantor, all these genera become monophyletic. Within Torinae, Atlantor can be diagnosed by having 5½ branched anal-fin rays, modally 8½ branched dorsal-fin rays, two pairs of long barbels, and by its distinct phylogenetic position.

Barbus urmianus, a synonym of Barbus cyri (Teleostei: Cyprinidae).

Barbus urmianus, from the upper Mahabad River in Lake Urmia basin, was distinguished from B. cyri based on several morphological characters. Our analysis demonstrated very small molecular (COI) differences between both species and mostly overlapping or identic morphological character states. Therefore, Barbus urmianus is treated as a junior synonym of B. cyri.

Mystus misrai Anuradha, 1986, a valid species from the Orontes drainage (Teleostei: Bagridae).

Mystus misrai from the northern Orontes drainage (Mediterranean Sea basin) is re-examined and recognised as a valid species. It is distinguished from M. pelusius from the Gulf basin by the lack of stripes on the flank, shorter fins, the eye situated below the dorsal head profile, and a K2P distance of 7.3% in its COI barcoding gene. Mystus misrai is likely Critically Endangered: only a single, spring-fed lake in Türkiye is known as its habitat. The biogeographic connection between the Orontes and the Gulf is discussed based on molecular data of 27 species native to the region.

Glyptothorax vatandousti, a new species of torrent catfish from the upper Karkheh drainage in Iran (Teleostei: Sisoridae).

Glyptothorax vatandousti, new species, from the upper Karkheh drainage, a tributary of the Iranian Tigris, is distinguished from its congeners in the Persian Gulf basin by having the flank with a fine, pale-brown mottled pattern overlaid by small and large, blackish or dark-brown blotches, deep caudal-peduncle (its depth 1.1-1.3 times in length), and without, or with a pale-brown triangle-shaped blotch in front of dorsal-fin origin.

Two new freshwater blennies from the Eastern Mediterranean basin (Teleostei: Blenniidae).

Two new species of Salariopsis are described from the Eastern Mediterranean basin. Salariopsis burcuae, new species, from the Bay of Antalya east to the Jordan, is characterised by having a short cirrus, usually not overlapping the 9th circum-orbital sensory pore, and many tiny black dots on the cheek not organised in rows or bands. The new species shows a 4.1% K2P sequence divergence on the cytochrome-c-oxidase subunit 1 (COI) barcoding region from its closest relative, S. fluviatilis. Salariopsis renatorum, new species, from the upper Ceyhan drainage and a coastal stream in Arsuz, is distinguished by having an unbranched supraocular tentacle, black lateral line pores, a short snout, and no black dots on the upper part of the flank and on the cheek. It is also distinguished from its geographically closest congener, S. burcuae, by a molecular distance of 8.8% K2P in its COI barcode region.

Glyptothorax sardashtensis, a new species of torrent catfish from the upper Lesser Zab drainage in Iran (Teleostei: Sisoridae).

Glyptothorax sardashtensis, new species, from the upper Lesser Zab in Iran, is distinguished from its congeners in the Persian Gulf basin by: a plain flank without black or brown blotches; a wide and round anterior margin of the medial pit in the thoracic adhesive apparatus; few, short median striae in the thoracic adhesive apparatus; three yellowish blotches arranged in a crescent-shaped arch on the nuchal plate in front of the dorsal-fin origin; no tubercles on the head and flank; and a short adipose fin. The new species is also distinguished by a minimum K2P sequence divergence of 2.16% in the mtDNA-COI barcode region from G. daemon and G. galaxias, its closest relatives. Glyptothorax kurdistanicus is re-discovered close to its type locality.

Spatial priorities for freshwater biodiversity conservation in light of catchment protection and connectivity in Europe.

Freshwater ecosystems host disproportionately high numbers of species relative to their surface area yet are poorly protected globally. We used data on the distribution of 1631 species of aquatic plant, mollusc, odonate and fish in 18,816 river and lake catchments in Europe to establish spatial conservation priorities based on the occurrence of threatened, range-restricted and endemic species using the Marxan systematic conservation planning tool. We found that priorities were highest for rivers and ancient lakes in S Europe, large rivers and lakes in E and N Europe, smaller lakes in NW Europe and karst/limestone areas in the Balkans, S France and central Europe. The a priori inclusion of well-protected catchments resulted in geographically more balanced priorities and better coverage of threatened (critically endangered, endangered and vulnerable) species. The a priori exclusion of well-protected catchments showed that priority areas that need further conservation interventions are in S and E Europe. We developed three ways to evaluate the correspondence between conservation priority and current protection by assessing whether a cathment has more (or less) priority given its protection level relative to all other catchments. Each method found that priority relative to protection was high in S and E Europe and generally low in NW Europe. The inclusion of hydrological connectivity had little influence on these patterns but decreased the coverage of threatened species, indicating a trade-off between connectivity and conservation of threatened species. Our results suggest that catchments in S and E Europe need urgent conservation attention (protected areas, restoration, management, species protection) in the face of imminent threats such as river regulation, dam construction, hydropower development and climate change. Our study presents continental-scale conservation priorities for freshwater ecosystems in ecologically meaningful planning units and will thus be important in freshwater biodiversity conservation policy and practice, and water management in Europe.

Contributions to the biodiversity of Vietnam - Results of VIETBIO inventory work and field training in Cuc Phuong National Park.

VIETBIO [Innovative approaches to biodiversity discovery and characterisation in Vietnam] is a bilateral German-Vietnamese research and capacity building project focusing on the development and transfer of new methods and technology towards an integrated biodiversity discovery and monitoring system for Vietnam. Dedicated field training and testing of innovative methodologies were undertaken in Cuc Phuong National Park as part and with support of the project, which led to the new biodiversity data and records made available in this article collection. VIETBIO is a collaboration between the Museum für Naturkunde Berlin - Leibniz Institute for Evolution and Biodiversity Science (MfN), the Botanic Garden and Botanical Museum, Freie Universität Berlin (BGBM) and the Vietnam National Museum of Nature (VNMN), the Institute of Ecology and Biological Resources (IEBR), the Southern Institute of Ecology (SIE), as well as the Institute of Tropical Biology (ITB); all Vietnamese institutions belong to the Vietnam Academy of Science and Technology (VAST). The article collection "VIETBIO" (https://doi.org/10.3897/bdj.coll.63) reports original results of recent biodiversity recording and survey work undertaken in Cuc Phuong National Park, northern Vietnam, under the framework of the VIETBIO project. The collection consist of this "main" cover paper - characterising the study area, the general project approaches and activities, while also giving an extensive overview on previous studies from this area - followed by individual papers for higher taxa as studied during the project. The main purpose is to make primary biodiversity records openly available, including several new and interesting findings for this biodiversity-rich conservation area. All individual data papers with their respective primary records are expected to provide useful baselines for further taxonomic, phylogenetic, ecological and conservation-related studies on the respective taxa and, thus, will be maintained as separate datasets, including separate GUIDs also for further updating.

Garra rezai, a new species from two widely disjunct areas in the Tigris drainage (Teleostei: Cyprinidae).

Garra rezai, new species, is described from the Chooman, a tributary of the Lesser Zab in Iran, and from headwaters of the Yanarsu, a tributary of the upper Tigris in Turkey. It is distinguished from its congeners in the Garra variabilis species group by having two pairs of barbels, a well-developed mental disc, 35-40 total scales along the lateral line, 15-19 scales along the predorsal midline, and 15-18 circumpeduncular scales. It is further characterised by having ten diagnostic nucleotide substitutions and the K2P genetic distances with the closest species i.e. G. klatti, G. kemali and G. variabilis as 11.9, 12.0, and 13.7%, respectively in the mtDNA COI barcode region.

DNA barcode data confirm the placement of subterranean Noemacheilus (Troglocobitis) starostini Parin 1983 in the genus Paracobitis (Teleostei, Nemacheilidae).

DNA barcodes (COI) of Troglocobitis starostini, endemic to a single site in Turkmenistan, were analysed and put into the taxonomic context of the large group of nemacheilid loaches known from Western and Central Asia. All applied phylogenetic tree-based analyses place the species into the genus Paracobitis. This finding supports previous morphological studies. While the exact position of Troglocobitis starostini within Paracobitis was not resolved unambiguously, it was constantly recovered within Paracobitis, irrespective of the tree reconstruction method applied. With a minimum interspecific K2P distance of 7.19% P. persa was the closest hit in our dataset, which comprised a total of ten species of Paracobitis, which showed an average interspecific K2P distance of 5.43% (range 2.78-9.44%).

Genetic relationships between sympatric and allopatric Coregonus ciscoes in North and Central Europe.

BACKGROUND: Sympatric speciation along ecological gradients has been studied repeatedly, in particular in freshwater fishes. Rapid post-glacial ecological divergence has resulted in numerous endemic species or ecologically distinct populations in lakes of the temperate zones. Here, we focus on the Baltic cisco (Coregonus albula) complex, to study the genetic similarity among two pairs of sympatric autumn- and spring-spawning populations from post-glacial German Lakes Stechlin and Breiter Luzin. For comparison, we included a similar pair of sympatric populations from the Swedish Lake Fegen. We wanted to explore potential genetic similarities between the three sympatric cisco population pairs in the three lakes, to evaluate whether the pairs may have emerged independently in the three lakes, or whether two different species may have colonized all three lakes independently. Furthermore, we considered allopatric C. albula populations from three Polish, three Finnish, and four Swedish locations, added one Siberian population of the sister species C. sardinella and a Swedish C. maraena (whitefish) population. By genotyping nine microsatellite markers in 655 individuals from these 18 populations, we wanted to elucidate how strongly the cisco populations differ across a larger geographical area within Europe. Finally, we compared the genetic differences between the spring- and autumn-spawning populations of ciscoes in the two German lakes to infer the potentially deteriorating effect of strong anthropogenic pressure on the lakes. RESULTS: Dendrogram, Principal Coordinate Analysis and admixture analysis all indicated strong correspondence between population differentiation and geographical location for most cisco populations in Europe, including the Siberian population of C. sardinella. However, populations from some Swedish lakes deviated from this general pattern, by showing a distinct genetic structure. We found evidence for independent evolution of the three sympatric population pairs, because the populations co-occurring in the same lake were always most closely related. However, genetic differentiation was weak in the two German population pairs, but strong in the Swedish Lake Fegen, indicating that the weak differentiation in the German pairs reported earlier has eroded further. CONCLUSIONS: Our results suggest that the genetic differentiation at neutral genetic markers among populations of the Baltic cisco complex has evolved (and is maintained) by random genetic drift in isolated populations. However, earlier studies on the Swedish populations combining mitochondrial DNA and microsatellite data indicate that also post-glacial immigration from separate glacial refugia has shaped the present genetic population structure. The low neutral differentiation of the German sympatric pairs in contrast to the Swedish pair suggests that recent anthropogenic effects on the lakes in Germany may put the endemic spring-spawners at risk to extinction.

Oxynoemacheilus isauricus, a new nemacheilid loach from Central Anatolia (Teleostei: Nemacheilidae).

Oxynoemacheilus isauricus, new species, from the Lakes Beysehir and Sugla basins in Central Anatolia is distinguished from all other species of the O. angorae group by having a very slender caudal peduncle (its depth 2.22.6 times in its length). The new species is further distinguished by having a short head (head length 2124% SL), and a midlateral series of irregularly shaped blotches on the flank. Oxynoemacheilus isauricus is also distinguished by a minimum K2P sequence divergence of 7.5% and 8.0% in the mtDNA-COI barcode region from O. eregliensis and O. atili, its closest relatives.

Oxynoemacheilus nasreddini, a new nemacheilid loach from Central Anatolia (Teleostei: Nemacheilidae).

Oxynoemacheilus nasreddini, new species, from Lake Aksehir, Eber, Egirdir, and Ilgin basins in Central Anatolia is distinguished from other species of Oxynoemacheilus in Central Anatolia by having irregularly shaped blotches on flank; 24 dark-brown bands on caudal fin; a slender body, and an emarginate caudal fin in which the shortest middle caudal-fin ray is 7691% of the longest ray of the upper caudal-fin lobe. Molecular data suggest that the new species is closely related to O. mediterraneus from the Aksu and Köprüçay drainages. Although the two species are separated by only a minimum K2P distance of 1.2% in the mtDNA COI barcode region, they are well distinguished morphologically. The situation is complicated by loaches from Lake Egirdir basin that are identified as O. nasreddini by their morphological character states but are only distinguished from O. mediterraneus by a minimum K2P distance of 0.2% in the mtDNA COI barcode region.

The Glyptothorax catfishes of the Euphrates and Tigris with the description of a new species (Teleostei: Sisoridae).

The Glyptothorax species inhabiting the Euphrates and Tigris drainages are reviewed and six species are recognised, one of which is described herein as new species. Glyptothorax armeniacus is endemic to headwater streams in the Euphrates drainage. Glyptothorax kurdistanicus is endemic to the upper Tigris downstream to the Lesser Zab drainage. Glyptothorax cous and G. steindachneri are riverine species widespread in both the Euphrates and Tigris drainages. Glyptothorax silviae is endemic to Iran. Glyptothorax daemon, new species, from the Greater Zab and Yanarsu in the upper Tigris drainage, is distinguished by having the thoracic adhesive apparatus strongly elevated, 1.11.2 times longer than wide, without tubercles on the head, well developed anteromedial striae, the medial pit without striae, and a short adipose fin. Glyptothorax daemon is separated into two mitochondrial lineages, externally indistinguishable and separated by a minimum K2P distance of 2.0% in the DNA barcode region. These lineages are paraphyletic in our analysis indicating past introgressive hybridisation with G. cous. All six species are diagnosed and all, except unstudied G. steindachneri, form distinct mitochondrial clades with between 1.2% and 3.4% minimum K2P distance between them. Species from the Euphrates and Tigris form a monophyletic mitochondrial group separated from 53 other Glyptothorax species studied from India and areas further east.

A genomic perspective on an old question: Salmo trouts or Salmo trutta (Teleostei: Salmonidae)?

There are particular challenges in defining the taxonomic status of recently radiated groups due to the low level of phylogenetic signal. Members of the Salmo trutta species-complex, which mostly evolved during and following the Pleistocene, show high morphological and ecological diversity that, along with their very wide geographic distribution, have led to morphological description of 47 extant nominal species. However, many of these species have not been supported by previous phylogenetic studies, which could be partly due to lack of significant genetic differences among them, the limited resolution offered by molecular methods previously used, as well as the often local scale of these studies. The development of next-generation sequencing (NGS) and related analytical tools have enhanced our ability to address such challenging questions. In this study, Genotyping-by-Sequencing (GBS) of 15,169 filtered SNPs and mitochondrial DNA (mtDNA) D-loop sequences were combined to assess the phylogenetic relationships among 166 brown trouts representing 21 described species and three undescribed groups collected from 84 localities throughout their natural distribution in Europe, west Asia, and North Africa. The data were analysed using different clustering algorithms (admixture analysis and discriminant analysis of principal components-DAPC), a Bayes Factor Delimitation (BFD) test, species tree reconstruction, gene flow tests (three- and four-population tests), and Rogue taxa identification tests. Genomic contributions of the Atlantic lineage brown trout were found in all major sea basins excluding the North African and Aral Sea basins, suggesting introgressive hybridization of native brown trouts driven by stocking using strains of the Atlantic lineage. After removing the phylogenetic noise caused by the Atlantic brown trout, admixture clusters and DAPC clustering based on GBS data, respectively, resolved 11 and 13 clusters among the previously described brown trout species, which were also supported by BFD test results. Our results suggest that natural hybridization between different brown trout lineages has probably played an important role in the origin of several of the putative species, including S. marmoratus, S. carpio, S. farioides, S. pellegrini, S. caspius (in the Kura River drainage) and Salmo sp. in the Danube River basin. Overall, our results support a multi-species taxonomy for brown trouts. They also resolve some species in the Adriatic-Mediterranean and Black Sea drainages as members of very closely related genomic clusters that may need taxonomic revision. However, any final conclusions pertaining to the taxonomy of the brown trout complex should be based on an integrative approach combining genomic, morphological, and ecological data. To avoid challenges in taxonomy and conservation of species complexes like brown trouts, it is suggested to describe species based on genomic clusters of populations instead of describing species based only on morphologically differentiated single type populations.

emOxynoemacheilus/em emphasicus/em, a new nemacheilid loach from the eastern Black Sea basin with some remarks on other Caucasian emOxynoemacheilus/em (Teleostei: Nemacheilidae).

Oxynoemacheilus phasicus, new species, is described from the Rioni and Enguri River drainages in Georgia. It is distinguished from other Oxynoemacheilus species in the O. brandtii group by a mottled or marbled flank pattern in adults, a slightly emarginate caudal fin, and a deep caudal peduncle. Molecular data suggest that the new species is characterized by a minimum K2P distance of 7.5% from O. brandtii from the Kura drainage in the mtDNA COI barcode region. Oxynoemacheilus brandtii and O. elsae are re-diagnosed. A very slender Oxynoemacheilus from the Aras drainage clusters as sister to O. elsae in our molecular analysis and not with O. brandtii from the Kura River. However, it is identified as O. brandtii as it is indistinguishable from this species in morphological characters.

emGarra/em emorontesi/em, a new species from the Orontes River drainage (Teleostei: Cyprinidae).

Garra orontesi, new species, is described from the Orontes River drainage in the eastern Mediterranean Sea basin in Turkey and Syria. It is distinguished from its congeners in the Mediterranean Sea basin and adjacent Mesopotamia by possessing 17-21 gill rakers on the lower part of the first gill arch, the pelvic-fin origin usually below the second branched dorsal-fin ray, 8½ branched dorsal-fin rays, usually 2-3 scales between the tip of the pectoral and pelvic-fin origins, and no tubercles behind the upper posterior eye margin. It is also distinguished by a minimum K2P distance of 2.7% in its COI barcode region against G. rufa, and 3.9% against the geographically adjacent G. turcica.

Oxynoemacheilus sarus/, a new nemacheilid loach from the lower Ceyhan and Seyhan in southern Anatolia (Teleostei: Nemacheilidae).

Oxynoemacheilus sarus, new species, is described from the lower Ceyhan and Seyhan drainages in southern Anatolia. It is distinguished from other Oxynoemacheilus species in Cilicia (including the Göksu, Seyhan and Ceyhan drainages) by possession of a series of irregularly shaped midlateral blotches, 3-5 dark-brown bands on the caudal fin, a complete lateral line, a forked caudal fin (shortest middle caudal-fin ray is 56-70% of longest ray of the upper caudal-fin lobe), the caudal peduncle depth 1.4-1.8 times in its length, and a suborbital groove in male individuals. The new species occurs in sympatry with superficially similar O. seyhanicola and O. evreni, and is distinguished by colour pattern as well as morphometric and molecular characters. Molecular data suggest that the closest relatives to the new species in our dataset are O. euphraticus and O. shehabi, which is characterised by a minimum K2P distance of 3.6% and 3.8%, respectively, in the COI mtDNA barcode region.

Oxynoemacheilus shehabi, a new nemacheilid loach from the upper Orontes in southern Syria (Teleostei: Nemacheilidae).

Oxynoemacheilus shehabi, new species, is described from the upper Orontes in southern Syria. It is distinguished from other Oxynoemacheilus species in the Levant by possession of a complete lateral line, a deeply emarginate caudal fin, a narrow caudal peduncle, a suborbital groove in male individuals, a well-developed pelvic axillary lobe, and 5-7 dark-brown bars on the flank. Molecular data suggest that the new species is characterised by a minimum K2P distance of 3.8% to O. "seyhanicola" in the COI mtDNA barcode region.