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1.
Astron Astrophys ; 6372020 May.
Artigo em Inglês | MEDLINE | ID: mdl-32565548

RESUMO

CONTEXT: Sulphur is one of the most abundant elements in the Universe. Surprisingly, sulphuretted molecules are not as abundant as expected in the interstellar medium and the identity of the main sulphur reservoir is still an open question. AIMS: Our goal is to investigate the H2S chemistry in dark clouds, as this stable molecule is a potential sulphur reservoir. METHODS: Using millimeter observations of CS, SO, H2S, and their isotopologues, we determine the physical conditions and H2S abundances along the cores TMC 1-C, TMC 1-CP, and Barnard 1b. The gas-grain model Nautilus is used to model the sulphur chemistry and explore the impact of photo-desorption and chemical desorption on the H2S abundance. RESULTS: Our modeling shows that chemical desorption is the main source of gas-phase H2S in dark cores. The measured H2S abundance can only be fitted if we assume that the chemical desorption rate decreases by more than a factor of 10 when n H > 2 × 104. This change in the desorption rate is consistent with the formation of thick H2O and CO ice mantles on grain surfaces. The observed SO and H2S abundances are in good agreement with our predictions adopting an undepleted value of the sulphur abundance. However, the CS abundance is overestimated by a factor of 5 - 10. Along the three cores, atomic S is predicted to be the main sulphur reservoir. CONCLUSIONS: The gaseous H2S abundance is well reproduced, assuming undepleted sulphur abundance and chemical desorption as the main source of H2S. The behavior of the observed H2S abundance suggests a changing desorption efficiency, which would probe the snowline in these cold cores. Our model, however, highly overestimates the observed gas-phase CS abundance. Given the uncertainty in the sulphur chemistry, we can only conclude that our data are consistent with a cosmic elemental S abundance with an uncertainty of a factor of 10.

2.
Astron Astrophys ; 6242019 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-31156252

RESUMO

GEMS is an IRAM 30m Large Program whose aim is determining the elemental depletions and the ionization fraction in a set of prototypical star-forming regions. This paper presents the first results from the prototypical dark cloud TMC 1. Extensive millimeter observations have been carried out with the IRAM 30m telescope (3 mm and 2 mm) and the 40m Yebes telescope (1.3 cm and 7 mm) to determine the fractional abundances of CO, HCO+, HCN, CS, SO, HCS+, and N2H+ in three cuts which intersect the dense filament at the well-known positions TMC 1-CP, TMC 1-NH3, and TMC 1-C, covering a visual extinction range from A V ~ 3 to ~20 mag. Two phases with differentiated chemistry can be distinguished: i) the translucent envelope with molecular hydrogen densities of 1-5×103 cm-3; and ii) the dense phase, located at A V > 10 mag, with molecular hydrogen densities >104 cm-3. Observations and modeling show that the gas phase abundances of C and O progressively decrease along the C+/C/CO transition zone (A V ~ 3 mag) where C/H ~ 8×10-5 and C/O~0.8-1, until the beginning of the dense phase at A V ~ 10 mag. This is consistent with the grain temperatures being below the CO evaporation temperature in this region. In the case of sulfur, a strong depletion should occur before the translucent phase where we estimate a S/H ~ (0.4 - 2.2) ×10-6, an abundance ~7-40 times lower than the solar value. A second strong depletion must be present during the formation of the thick icy mantles to achieve the values of S/H measured in the dense cold cores (S/H ~8×10-8). Based on our chemical modeling, we constrain the value of ζ H2 to ~ (0.5 - 1.8) ×10-16 s-1 in the translucent cloud.

4.
J Mol Biol ; 312(3): 525-40, 2001 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-11563914

RESUMO

Mammalian pyruvate kinase (PK) is a four-domain enzyme that is active as a homo-tetramer. Tissue-specific isozymes of PK exhibit distinct levels of allosteric regulation. PK expressed in muscle tissue (M1-PK) shows hyperbolic steady-state kinetics, whereas PK expressed in kidney tissue (M2-PK) displays sigmoidal kinetics. Rabbit M1 and M2-PK are isozymes whose sequences differ in only 22 out of 530 residues per subunit, and these changes are localized in an inter-subunit interface. Previous studies have shown that a single amino acid mutation to M1-PK at either the Y (S402P) or Z (T340 M) subunit interface can confer a level of allosteric regulation that is intermediate to M1-PK and M2-PK. In an effort to elucidate the roles of the inter-subunit interaction in signal transmission and the functional/structural connectivity between these interfaces, the S402P mutant of M1-PK was crystallized and its structure resolved to 2.8 A. Although the overall S402P M1-PK structure is nearly identical with the wild-type structure within experimental error, significant differences in the conformation of the backbone are found at the site of mutation along the Y interface. In addition, there is a significant change along the Z interface, namely, a loss of an inter-subunit salt-bridge between Asp177 of domain B and Arg341 of domain A of the opposing subunit. Concurrent with the loss of the salt-bridge is an increase in the degree of rotational flexibility of domain B that constitutes the active site. Comparison of previous PK structures shows a correlation between an increase in this domain movement with the loss of the Asp177: Arg341 salt-bridge. These results identify the structural linkages between the Y and Z interfaces in regulating the interconversion of conformational states of rabbit M1-PK.


Assuntos
Rim/enzimologia , Músculo Esquelético/enzimologia , Piruvato Quinase/química , Piruvato Quinase/metabolismo , Regulação Alostérica , Substituição de Aminoácidos , Animais , Sítios de Ligação , Cristalografia por Raios X , Dimerização , Frutosedifosfatos/metabolismo , Isoenzimas/química , Isoenzimas/genética , Isoenzimas/metabolismo , Modelos Moleculares , Mutação , Especificidade de Órgãos , Estrutura Quaternária de Proteína , Estrutura Terciária de Proteína , Subunidades Proteicas , Piruvato Quinase/genética , Coelhos , Eletricidade Estática , Relação Estrutura-Atividade
5.
Anal Biochem ; 291(2): 269-78, 2001 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-11401301

RESUMO

Protein tyrosine phosphatases are a class of enzymes that function to modulate tyrosine phosphorylation of cellular proteins and play an essential role in regulating cell function. PTP1B has been implicated in the negative regulation of the insulin signaling pathway by dephosphorylating the activated insulin receptor. Inhibiting this phosphatase and preventing the insulin-receptor downregulation has been suggested as a target for the treatment of Type II diabetes. A high-throughput screen for inhibitors of PTP1B was developed using a scintillation proximity assay (SPA) with GST-- or FLAG--PTP1B((1-320)) and a potent [(3)H]-tripeptide inhibitor. The problem of interference from extraneous oxidizing and alkylating agents which react with the cysteine active-site nucleophile was overcome by the use of the catalytically inactive C215S form of the native enzyme (GST--PTP1B(C215S)). The GST--PTP1B was linked to the protein A scintillation bead via GST antibody. The radiolabeled inhibitor when bound to the enzyme gave a radioactive signal that was competed away by the unknown competitive compounds. Further utility of PTP1B(C215S) was demonstrated by mixing in the same well both the catalytically inactive GST--PTP1B(C215S) and the catalytically active FLAG--CD45 with an inhibitor. Both a binding and kinetic assay was then performed in the same 96-well plate with the inhibition results determined for the PTP1B(C215S) (binding assay) and CD45 (activity assay). In this way inhibitors could be differentiated between the two phosphatases under identical assay conditions in one 96-well assay plate. The use of a mutant to reduce interference in a binding assay and compare with activity assays is also amenable for most cysteine active-site proteases.


Assuntos
Inibidores Enzimáticos/análise , Inibidores Enzimáticos/metabolismo , Proteínas Tirosina Fosfatases/antagonistas & inibidores , Proteínas Tirosina Fosfatases/metabolismo , Ensaio Radioligante/métodos , Substituição de Aminoácidos/genética , Animais , Anticorpos/imunologia , Ligação Competitiva , Inibidores Enzimáticos/farmacologia , Enzimas Imobilizadas/antagonistas & inibidores , Enzimas Imobilizadas/genética , Enzimas Imobilizadas/imunologia , Enzimas Imobilizadas/metabolismo , Cabras , Concentração Inibidora 50 , Antígenos Comuns de Leucócito/metabolismo , Ligantes , Camundongos , Microesferas , Ligação Proteica , Proteína Tirosina Fosfatase não Receptora Tipo 1 , Proteínas Tirosina Fosfatases/genética , Proteínas Tirosina Fosfatases/imunologia , Coelhos , Proteínas Recombinantes de Fusão/imunologia , Proteínas Recombinantes de Fusão/metabolismo , Reprodutibilidade dos Testes , Proteína Estafilocócica A/metabolismo
6.
Bioorg Med Chem Lett ; 11(8): 1059-62, 2001 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-11327589

RESUMO

Characterization of the metabolites of the COX-2 inhibitor etoricoxib (MK-0663 and L-791,456) produced in vitro indicate formation of an N-oxide pyridine and hydroxymethyl pyridine that can further be glucuronidated or oxidized to an acid. Significant turnover is observed in human hepatocytes. Several CYPs are involved in the oxidative biotranformations and, from in vitro studies, etoricoxib is not a potent CYP3A4 inducer or inhibitor. Based on an in vitro whole blood assay, none of the metabolites of etoricoxib inhibits COX-1 or contributes significantly to the inhibition of COX-2.


Assuntos
Sistema Enzimático do Citocromo P-450/metabolismo , Isoenzimas/antagonistas & inibidores , Oxigenases de Função Mista/metabolismo , Piridinas/metabolismo , Piridinas/farmacologia , Sulfonas/metabolismo , Sulfonas/farmacologia , Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase/metabolismo , Inibidores de Ciclo-Oxigenase/farmacologia , Citocromo P-450 CYP3A , Etoricoxib , Hepatócitos/metabolismo , Humanos , Isoenzimas/sangue , Proteínas de Membrana , Microssomos/metabolismo , Oxirredução , Prostaglandina-Endoperóxido Sintases/sangue
7.
J Biol Chem ; 276(28): 26036-43, 2001 Jul 13.
Artigo em Inglês | MEDLINE | ID: mdl-11352902

RESUMO

We have studied T-cell protein-tyrosine phosphatase (TCPTP) as a model phosphatase in an attempt to unravel amino acid residues that may influence the design of specific inhibitors. Residues 48--50, termed the YRD motif, a region that is found in protein-tyrosine phosphatases, but absent in dual-specificity phosphatases was targeted. YRD derivatives of TCPTP were characterized by steady-state kinetics and by inhibition studies with BzN-EJJ-amide, a potent inhibitor of TCPTP. Substitution of Asp(50) to alanine or Arg(49) to lysine, methionine, or alanine significantly affected substrate hydrolysis and led to a substantial decrease in affinity for BzN-EJJ-amide. The influence of residue 49 on substrate/inhibitor selectivity was further investigated by comparing subsite amino acid preferences of TCPTP and its R49K derivative by affinity selection coupled with mass spectrometry. The greatest effect on selectivity was observed on the residue that precedes the phosphorylated tyrosine. Unlike wild-type TCPTP, the R49K derivative preferred tyrosine to aspartic or glutamic acid. BzN-EJJ-amide which retains the preferred specificity requirements of TCPTP and PTP1B was equipotent on both enzymes but greater than 30-fold selective over other phosphatases. These results suggest that Arg(49) and Asp(50) may be targeted for the design of potent and selective inhibitors of TCPTP and PTP1B.


Assuntos
Proteínas Tirosina Fosfatases/metabolismo , Linfócitos T/enzimologia , Substituição de Aminoácidos , Sítios de Ligação , Humanos , Proteínas Tirosina Fosfatases/química , Proteínas Tirosina Fosfatases/genética , Especificidade por Substrato
8.
J Pharmacol Exp Ther ; 296(2): 558-66, 2001 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11160644

RESUMO

We report here the preclinical profile of etoricoxib (MK-0663) [5-chloro-2-(6-methylpyridin-3-yl)-3-(4-methylsulfonylphenyl) pyridine], a novel orally active agent that selectively inhibits cyclooxygenase-2 (COX-2), that has been developed for high selectivity in vitro using whole blood assays and sensitive COX-1 enzyme assays at low substrate concentration. Etoricoxib selectively inhibited COX-2 in human whole blood assays in vitro, with an IC(50) value of 1.1 +/- 0.1 microM for COX-2 (LPS-induced prostaglandin E2 synthesis), compared with an IC(50) value of 116 +/- 8 microM for COX-1 (serum thromboxane B2 generation after clotting of the blood). Using the ratio of IC(50) values (COX-1/COX-2), the selectivity ratio for the inhibition of COX-2 by etoricoxib in the human whole blood assay was 106, compared with values of 35, 30, 7.6, 7.3, 2.4, and 2.0 for rofecoxib, valdecoxib, celecoxib, nimesulide, etodolac, and meloxicam, respectively. Etoricoxib did not inhibit platelet or human recombinant COX-1 under most assay conditions (IC(50) > 100 microM). In a highly sensitive assay for COX-1 with U937 microsomes where the arachidonic acid concentration was lowered to 0.1 microM, IC(50) values of 12, 2, 0.25, and 0.05 microM were obtained for etoricoxib, rofecoxib, valdecoxib, and celecoxib, respectively. These differences in potency were in agreement with the dissociation constants (K(i)) for binding to COX-1 as estimated from an assay based on the ability of the compounds to delay the time-dependent inhibition by indomethacin. Etoricoxib was a potent inhibitor in models of carrageenan-induced paw edema (ID(50) = 0.64 mg/kg), carrageenan-induced paw hyperalgesia (ID(50) = 0.34 mg/kg), LPS-induced pyresis (ID(50) = 0.88 mg/kg), and adjuvant-induced arthritis (ID(50) = 0.6 mg/kg/day) in rats, without effects on gastrointestinal permeability up to a dose of 200 mg/kg/day for 10 days. In squirrel monkeys, etoricoxib reversed LPS-induced pyresis by 81% within 2 h of administration at a dose of 3 mg/kg and showed no effect in a fecal 51Cr excretion model of gastropathy at 100 mg/kg/day for 5 days, in contrast to lower doses of diclofenac or naproxen. In summary, etoricoxib represents a novel agent that selectively inhibits COX-2 with 106-fold selectivity in human whole blood assays in vitro and with the lowest potency of inhibition of COX-1 compared with other reported selective agents.


Assuntos
Inibidores de Ciclo-Oxigenase/farmacologia , Isoenzimas/metabolismo , Prostaglandina-Endoperóxido Sintases/metabolismo , Piridinas/farmacologia , Sulfonas/farmacologia , Algoritmos , Animais , Anti-Inflamatórios/farmacologia , Ácido Araquidônico/metabolismo , Células CHO , Cricetinae , Ciclo-Oxigenase 1 , Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase/toxicidade , Etoricoxib , Gastroenteropatias/induzido quimicamente , Gastroenteropatias/patologia , Humanos , Ionóforos/metabolismo , Isoenzimas/sangue , Masculino , Proteínas de Membrana , Microssomos Hepáticos/efeitos dos fármacos , Microssomos Hepáticos/enzimologia , Prostaglandina-Endoperóxido Sintases/sangue , Piridinas/toxicidade , Ratos , Ratos Sprague-Dawley , Proteínas Recombinantes/sangue , Proteínas Recombinantes/metabolismo , Especificidade por Substrato , Sulfonas/toxicidade , Tromboxano B2/biossíntese
9.
Biophys J ; 79(2): 756-66, 2000 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-10920009

RESUMO

A single-cysteine mutant of the lactose transport protein LacS(C320A/W399C) from Streptococcus thermophilus was selectively labeled with a nitroxide spin label, and its mobility in lipid membranes was studied as a function of its concentration in the membrane by saturation-transfer electron spin resonance. Bovine rhodopsin was also selectively spin-labeled and studied to aid the interpretation of the measurements. Observations of spin-labeled proteins in macroscopically aligned bilayers indicated that the spin label tends to orient so as to reflect the transmembrane orientation of the protein. Rotational correlation times of 1-2 micros for purified spin-labeled bovine rhodopsin in lipid membranes led to viscosities of 2.2 poise for bilayers of dimyristoylphosphatidylcholine (28 degrees C) and 3.0 poise for the specific mixture of lipids used to reconstitute LacS (30 degrees C). The rotational correlation time for LacS did not vary significantly over the range of low concentrations in lipid bilayers, where optimal activity was seen to decrease sharply and was determined to be 9 +/- 1 micros (mean +/- SD) for these samples. This mobility was interpreted as being too low for a monomer but could correspond to a dimer if the protein self-associates into an elongated configuration within the membrane. Rather than changing its oligomeric state, LacS appeared to become less ordered at the concentrations in aligned membranes exceeding 1:100 (w/w) with respect to the lipid.


Assuntos
Proteínas de Escherichia coli , Proteínas de Membrana Transportadoras/química , Proteínas de Transporte de Monossacarídeos , Rodopsina/química , Simportadores , Substituição de Aminoácidos , Animais , Bovinos , Membrana Celular/enzimologia , Dimiristoilfosfatidilcolina , Espectroscopia de Ressonância de Spin Eletrônica , Lipossomos , Proteínas de Membrana Transportadoras/isolamento & purificação , Proteínas de Membrana Transportadoras/metabolismo , Mutagênese Sítio-Dirigida , Conformação Proteica , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Rodopsina/isolamento & purificação , Rotação , Marcadores de Spin , Streptococcus/enzimologia
10.
J Biol Chem ; 275(43): 33527-35, 2000 Oct 27.
Artigo em Inglês | MEDLINE | ID: mdl-10921919

RESUMO

The quaternary structure of LacS, the lactose transporter of Streptococcus thermophilus, has been determined for the detergent-solubilized and the membrane-reconstituted state of the protein. The quaternary structure of the n-dodecyl-beta-d-maltoside-solubilized state was studied using a combination of sedimentation velocity and equilibrium centrifugation analysis. From these measurements it followed that the detergent-solubilized LacS undergoes reversible self-association with a monomer to dimer mode of association. The association constants were 5.4 +/- 3.6 and 4.4 +/- 1.0 ml mg(-1) as determined from the velocity and equilibrium sedimentation measurements, respectively. The experiments did not indicate significant changes in the shape of the protein-detergent complex or the amount of detergent bound in going from the monomeric to dimeric state of LacS. Importantly, a single Cys mutant of LacS is labeled by 2-(4'-maleimidylanilino)naphthalene-6-sulfonic acid in a substrate-dependent manner, indicating that the detergent-solubilized protein exhibits ligand binding activity. The quaternary structure of membrane-reconstituted LacS was determined by freeze-fracture electron microscopy analysis. Recent developments in the analysis of freeze-fracture images (Eskandari, S. P., Wright, E. M., Freman, M., Starace, D. M., and Zampighi, G. A. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 11235-11240) allowed us to directly correlate the cross-sectional area of the transmembrane segment to a dimeric state of the functionally membrane-reconstituted LacS protein. The cross-sectional area of the LacS protein was calibrated using the membrane-reconstituted transmembrane domain of the mannitol transporter enzyme II, an intramembrane particle for which the cross-sectional area was obtained from maps of two-dimensional crystals. The consequences of the determined quaternary structure for the transport function and regulation of LacS are discussed.


Assuntos
Proteínas de Escherichia coli , Proteínas de Membrana Transportadoras/química , Proteínas de Transporte de Monossacarídeos , Simportadores , Detergentes/farmacologia , Galactose/metabolismo , Glucosídeos/metabolismo , Estrutura Quaternária de Proteína
11.
Paediatr Anaesth ; 10(3): 267-72, 2000.
Artigo em Inglês | MEDLINE | ID: mdl-10792742

RESUMO

The hypothesis that young infants are more sensitive to the haemodynamic depressant effects of halothane compared with older children was tested. One hundred and sixty unpremedicated, ASA physical status I or II paediatric patients without cardiac or pulmonary disease were divided into five age groups: term neonates, 1-6 months, 6-24 months, 2-6 years and 6-12 years. Anaesthetic induction was achieved with halothane in oxygen and air via mask. Vecuronium 0.1 mg.kg-1 was administered intravenously. During normocapnic manual ventilation by mask, endtidal halothane concentration was maintained at either 2xage-specific MAC (Method I) or 1.7% (Method II) in 20 patients in each age group for 10 min. In both Method I and Method II, systolic and mean blood pressure of term neonates and infants aged 1-6 months decreased significantly (P < 0.01) compared with other age groups. The results of this study demonstrate that neonates and young infants are more susceptible to haemodynamic depression during halothane anaesthesia than are older children, confirming clinical experience.


Assuntos
Anestésicos Inalatórios/farmacologia , Halotano/farmacologia , Hemodinâmica/efeitos dos fármacos , Fatores Etários , Pressão Sanguínea/efeitos dos fármacos , Estudos de Casos e Controles , Criança , Pré-Escolar , Depressão Química , Relação Dose-Resposta a Droga , Procedimentos Cirúrgicos Eletivos , Frequência Cardíaca/efeitos dos fármacos , Humanos , Lactente , Recém-Nascido
12.
Can J Anaesth ; 46(12): 1185-90, 1999 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-10608216

RESUMO

PURPOSE: Efforts to harmonize the standards of the CSA and the ISO, as they relate to compressed medical gas supply and piping, prompted us to review ten years experience with oxygen concentrators (OCs) in Canada used as a primary hospital oxygen supply. The goals of this study were; 1) To document the number of Canadian OC Hospital sites, 2) to define what impact these units have had on medical practice and patient care, and 3) to explore trends in oxygen costing and utilization at the study sites. METHODS: Following a four part mail survey and telephone follow up, site surveys were conducted for all hospitals utilizing an OC. Installation and service records, operating costs, amortization detail, leasing records as well as patient safety were all detailed. RESULTS: Forty eight of 52 Canadian hospitals utilizing an OC participated. Clinical activity at the surveyed sites of 1996 included 30,642 surgical operations, 9,415 intensive care bed days and 364,529 emergency room visits. The cumulative survey represents 1,026,819 hr of OC operation. During a 24 hr day, OCs operate 55 +/- 3% of the time. Financial analysis was validated at 43 of the 48 hospital sites. During the study the unit cost of oxygen was reduced by 62% (P <.0001). An annual increase in oxygen consumption of 11.5 +/- 2% was documented (P <.0001). No patient care critical incidents related to OCs were reported. CONCLUSION: An OC installation which is CAN/CSA Z305.6-M92 compliant provides a safe, reliable, cost efficient primary hospital source of oxygen.


Assuntos
Anestesiologia/instrumentação , Oxigenoterapia/instrumentação , Oxigênio , Anestesiologia/economia , Canadá , Estudos de Avaliação como Assunto , Oxigenoterapia/economia
13.
Bioorg Med Chem Lett ; 9(12): 1715-20, 1999 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-10397507

RESUMO

A series of novel 2-alkoxy, 2-thioalkoxy and 2-amino-3-(4-methylsulfonyl)phenylpyridines has been synthesized and shown to be highly potent and selective cyclooxygenase-2 (COX-2) inhibitors. Structure-activity relationship studies have demonstrated that central pyridine ring substituents play an important role in the COX-2 potency, selectivity vs the COX-1 enzyme, and oral activity.


Assuntos
Inibidores de Ciclo-Oxigenase/síntese química , Isoenzimas/metabolismo , Prostaglandina-Endoperóxido Sintases/metabolismo , Piridinas/química , Animais , Anti-Inflamatórios não Esteroides/síntese química , Anti-Inflamatórios não Esteroides/farmacologia , Disponibilidade Biológica , Células CHO , Cricetinae , Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase 2 , Inibidores de Ciclo-Oxigenase/química , Inibidores de Ciclo-Oxigenase/farmacologia , Piridinas/síntese química , Piridinas/farmacologia , Ratos , Relação Estrutura-Atividade
14.
Biochemistry ; 38(16): 5111-6, 1999 Apr 20.
Artigo em Inglês | MEDLINE | ID: mdl-10213615

RESUMO

The molecular chaperone SecB targets preproteins to SecA at the translocation sites in the cytoplasmic membrane of Escherichia coli. SecA recognizes SecB via its carboxyl-terminal 22 aminoacyl residues, a highly conserved domain that contains 3 cysteines and 1 histidine residue that could potentially be involved in the coordination of a metal ion. Treatment of SecA with a zinc chelator resulted in a loss of the stimulatory effect of SecB on the SecA translocation ATPase activity, while the activity could be restored by the addition of ZnCl2. Interaction of SecB with the SecB binding domain of SecA is disrupted by chelators of divalent cations, and could be restored by the addition of Cu2+ or Zn2+. Atomic absorption and electrospray mass spectrometry revealed the presence of one zinc atom per monomeric carboxyl terminus of SecA. It is concluded that the SecB binding domain of SecA is stabilized by a zinc ion that promotes the functional binding of SecB to SecA.


Assuntos
Adenosina Trifosfatases/metabolismo , Proteínas de Bactérias/metabolismo , Proteínas de Escherichia coli , Proteínas de Membrana Transportadoras , Zinco/química , Adenosina Trifosfatases/antagonistas & inibidores , Adenosina Trifosfatases/fisiologia , Sequência de Aminoácidos , Naftalenossulfonato de Anilina/química , Proteínas de Bactérias/antagonistas & inibidores , Proteínas de Bactérias/fisiologia , Sítios de Ligação/efeitos dos fármacos , Transporte Biológico/efeitos dos fármacos , Cátions Bivalentes , Quelantes/farmacologia , Cisteína/química , Cisteína/metabolismo , Escherichia coli , Etilenodiaminas/farmacologia , Chaperonas Moleculares/metabolismo , Chaperonas Moleculares/fisiologia , Dados de Sequência Molecular , Fragmentos de Peptídeos/antagonistas & inibidores , Fragmentos de Peptídeos/metabolismo , Canais de Translocação SEC , Proteínas SecA , Reagentes de Sulfidrila
15.
Biochem J ; 337 ( Pt 2): 219-23, 1999 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-9882618

RESUMO

Peptides containing the non-hydrolysable phosphotyrosine analogue 4-[difluro(phosphono)methyl]phenylalanine [Phe(CF2P)] were synthesized and tested as inhibitors of the protein tyrosine phosphatases (PTPs) PTP1B, CD45, PTPbeta, LAR and SHP-1. We have identified peptides containing two adjacent Phe(CF2P) residues as potent inhibitors of PTPs. The tripeptide having the sequence Glu-Phe(CF2P)-Phe(CF2P) is a potent and selective inhibitor of PTP1B. This peptide inhibits PTP1B with an IC50 of 40 nM, which is at least 100-fold lower than with other PTPs. A second tripeptide, Pro-Phe(CF2P)-Phe(CF2P), is most potent against PTPbeta, with an IC50 of 200 nM, and inhibits PTP1B with an IC50 of 300 nM. These data suggest that it is possible to develop selective, active-site-directed, reversible, potent inhibitors of PTPs.


Assuntos
Oligopeptídeos/farmacologia , Fenilalanina/análogos & derivados , Proteínas Tirosina Fosfatases/antagonistas & inibidores , Domínio Catalítico/efeitos dos fármacos , Receptores ErbB/metabolismo , Oligopeptídeos/síntese química , Fragmentos de Peptídeos/metabolismo , Fenilalanina/farmacologia , Proteínas Recombinantes/antagonistas & inibidores
16.
Mol Membr Biol ; 16(4): 297-304, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-10766129

RESUMO

The di-tripeptide transport system (DtpT) of Lactococcus lactis was purified to apparent homogeneity by pre-extraction of crude membrane vesicles with octaethylene glycol monodecyl ether (C10E8), followed by solubilization with n-dodecyl-beta-D-maltoside (DDM) and chromatography on a Ni-NTA resin. The DtpT protein was reconstituted into detergent-destabilized preformed liposomes prepared from E. coli phospholipid/phosphatidylcholine. A variety of detergents were tested for their ability to mediate the membrane reconstitution of DtpT and their effectiveness to yield proteoliposomes with a high transport activity. The highest activities were obtained with TX100, C12E8 and DM, whereas DDM yielded relatively poor activities, in particular when this detergent was used at concentrations beyond the onset of solubilization of the preformed liposomes. Parallel with the low activity, significant losses of lipid were observed when the reconstitution was performed at high DDM concentrations. This explained at least part of the reduced transport activity as the DtpT protein was highly dependent on the final lipid-to-protein ratios in the proteoliposomes. Consistent with the difference in mechanism of DDM- and TX100-mediated membrane protein reconstitution, the orientation of the DtpT protein in the membrane was random with DDM and inside-in when TX100 was used. The methodology to determine the orientation of membrane-reconstituted proteins from the accessibility of cysteines for thiol-specific reagents is critically evaluated.


Assuntos
Proteínas de Bactérias/química , Proteínas de Transporte/química , Lactococcus lactis/química , Lipídeos de Membrana/química , Proteínas de Membrana/química , Proteínas de Membrana Transportadoras , Proteínas de Bactérias/isolamento & purificação , Western Blotting , Proteínas de Transporte/isolamento & purificação , Centrifugação com Gradiente de Concentração , Detergentes , Dipeptídeos/química , Eletroforese em Gel de Poliacrilamida , Glucosídeos , Concentração de Íons de Hidrogênio , Cinética , Lipossomos/química , Proteínas de Membrana/isolamento & purificação , Polietilenoglicóis
17.
Biochemistry ; 37(44): 15266-76, 1998 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-9799487

RESUMO

Isozymes of pyruvate kinase (PK) expressed in rabbit muscle and kidney show different allosteric kinetics. The only amino acid changes in the two isozymes, originating from alternative RNA splicing, occur at a stretch of 55 amino acids in the C domain near the subunit interface. The self-correcting distance geometry (SECODG) program DIAMOD was used to calculate a homology model of these interfacial contacts in the four helix bundle of the kidney PK dimer, based on the X-ray structure of the tetrameric rabbit muscle PK [Larsen et al. (1994) Biochemistry 33, 6301-6309]. Energy refinement with the program FANTOM, using the ECEPP/2 force field to assess packing and electrostatic interactions between the two subunits, yielded two groups of energetically favorable conformations. The primary difference in the two groups is the loop conformation of residue Pro 402, which is serine in muscle PK. In one loop conformation, the conserved Lys 421 can form an intersubunit salt bridge as observed in the muscle PK crystal structure. The other loop conformation favors an alternative intrasubunit salt bridge, similar to that found in the Escherichia coli PK structure, which was not used for generating the model. The intersubunit salt bridge leads to an intersubunit hydrogen bonding between Lys 421 of one subunit and Tyr 443 of the other. To provide direct evidence on the roles of these residues, site-directed mutagenesis of the muscle PK gene was conducted. Converting Ser 402 to a proline and Tyr 443 to a phenylalanine changed neither the secondary nor the tetrameric structure, as measured by far UV-CD and sedimentation velocity, respectively. However, the S402P mutant exhibits steady-state kinetics, indicating that the mutant is more reponsive to regulation by effectors, while the mutant Y443F was essentially equivalent to wild-type muscle PK protein except for a lower affinity to phosphoenolpyruvate. These findings suggest a pivotal role for a few key residues in the allosteric regulation in PK.


Assuntos
Piruvato Quinase/química , Piruvato Quinase/metabolismo , Regulação Alostérica , Animais , Sítios de Ligação , Dicroísmo Circular , Metabolismo Energético , Rim/enzimologia , Cinética , Lisina/química , Lisina/metabolismo , Computação Matemática , Modelos Moleculares , Músculo Esquelético/enzimologia , Mutagênese Sítio-Dirigida , Fenilalanina/genética , Prolina/genética , Conformação Proteica , Estrutura Secundária de Proteína , Piruvato Quinase/genética , Coelhos , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/síntese química , Proteínas Recombinantes/isolamento & purificação , Serina/genética , Relação Estrutura-Atividade , Tirosina/genética , Ultracentrifugação
18.
Paediatr Anaesth ; 8(4): 293-8, 1998.
Artigo em Inglês | MEDLINE | ID: mdl-9672926

RESUMO

The ideal preoxygenation period prior to laryngoscopy in children is unclear. This study was performed to determine an appropriate duration of preoxygenation for infants and children prior to laryngoscopy using endtidal oxygen (FE'O2) criteria. Healthy paediatric patients for elective day surgery procedures were studied. An inflatable mask connected to an oxygen-primed paediatric anaesthesia semiclosed circuit was placed on the face while patients breathed spontaneously during 6.min-1 oxygen flow. An FE'O2 of 0.9 was considered the endpoint, and if not achieved in two min the protocol was ended. Fifty-eight children were studied. Six patients never achieved an FE'O2 of 0.9 and were not considered in the analysis. The times (in seconds with mean +/- SD and range) to achieve a minimum endtidal (FE'O2) of 0.9 for under six months were 36 +/- 11.4(20-50), 7-12 months were 35.5 +/- 13.3(20-60), 13-36 months were 42.6 +/- 18.7(20-90), 37-60 months were 50.8 +/- 18.5(30-90), > 60 months were 68.4 +/- 24.1(30-100). Logistic regression curves were determined for each age group describing the probability of achieving an FE'O2 of 0.9 against time of preoxygenation. All children with satisfactory mask fit were able to preoxygenate to an FE'O2 of 0.9 within 100 s.


Assuntos
Anestesia , Laringoscopia , Oxigenoterapia , Procedimentos Cirúrgicos Ambulatórios , Anestesiologia/instrumentação , Criança , Pré-Escolar , Procedimentos Cirúrgicos Eletivos , Humanos , Lactente , Intubação Intratraqueal , Máscaras , Fatores de Tempo
19.
J Biol Chem ; 273(24): 14772-9, 1998 Jun 12.
Artigo em Inglês | MEDLINE | ID: mdl-9614077

RESUMO

A fundamental issue in allosteric regulatory enzymes is the identification of pathways of signal transmission. Rabbit muscle and kidney pyruvate kinase isozymes are ideal to address this issue because these isozymes exhibit different enzymatic regulatory patterns, and the sequence differences between these isozymes have identified the amino acid residues that alter their kinetic behavior. In an earlier study, Cheng et al. (Cheng, X., Friesen, R. H. E., and Lee, J. C. (1996) J. Biol. Chem. 271, 6313-6321), reported the effects of a threonine to methionine mutation at residue 340 in the muscle isozyme. In this study, the same mutation was effected in the kidney isozyme. Qualitatively, the same negative effects are observed in both isozymes, namely a significant decrease in catalytic efficiency and decrease in apparent affinity for phosphoenolpyruvate but no change in affinity for ADP, and a decrease in responsiveness to the presence of effectors, be it activator or inhibitor. Because the diversity in the primary sequence between these two isozymes does not alter the negative impact of the T340M mutation, it can be concluded that this mutation exerts a dominant, negative effect. The negative effects of T340M mutation on the kinetic properties imply that there is communication between residue 340 and the active site. Residue 340 is located at the 1,4 subunit interface; however, a T340M mutation enhances the dimerization affinity along the 1,2 subunit interface. Thus, this study has identified a communication network among the active site, residue 340, and the 1,2 subunit interface.


Assuntos
Piruvato Quinase/química , Difosfato de Adenosina/farmacologia , Regulação Alostérica/fisiologia , Animais , Sítios de Ligação , Dicroísmo Circular , Frutosedifosfatos/farmacologia , Isoenzimas/química , Rim/enzimologia , Cinética , Modelos Moleculares , Músculos/enzimologia , Mutagênese Sítio-Dirigida/genética , Mutação/genética , Fosfoenolpiruvato/farmacologia , Coelhos , Ultracentrifugação
20.
J Extra Corpor Technol ; 30(2): 73-6, 1998 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10182116

RESUMO

A change in brand suppliers of heparin at our institution resulted in a number of anecdotal reports of possible differences in potency. Both products are marketed as heparin sodium extracted from porcine intestinal mucosa. Heparin Leo is 1000 international units (British Pharmacopeia) per ml. while Hepalean is 10,000 United States Pharmacopeia (U.S.P) units per ml. Perfusion records were retrospectively reviewed for one month periods when Heparin Leo (n = 52) or Hepalean (n = 61) were used to provide anticoagulation therapy for cardiopulmonary bypass. Heparin Leo was found to be less clinically potent than Hepalean. While increasing the initial loading dose of Heparin Leo by 5% (378 vs 398 units/kg-1), the initial post load activated clotting time (ACT) was 17% lower (556 vs 666 seconds). Heparin units required per kilogram per minute of cardiopulmonary bypass were 23% higher for Heparin Leo. Additionally 8 of 52 Heparin Leo patients did not achieve an initial post load ACT of greater than 400 secs while this occurred in 2 of 61 patients treated with Hepalean. These results were statistically significant. British Pharmacopeia and United States Pharmacopeia heparin reference standards differences are insufficient to explain the discrepancies observed in this study.


Assuntos
Anticoagulantes/farmacocinética , Coagulação Sanguínea/efeitos dos fármacos , Heparina/farmacocinética , Animais , Anticoagulantes/administração & dosagem , Anticoagulantes/síntese química , Anticoagulantes/normas , Ponte Cardiopulmonar , Heparina/administração & dosagem , Heparina/síntese química , Heparina/normas , Humanos , Mucosa Intestinal , Farmacopeias como Assunto , Padrões de Referência , Estudos Retrospectivos , Suínos , Equivalência Terapêutica , Reino Unido , Estados Unidos , Tempo de Coagulação do Sangue Total
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