Potential Induced Protonation of the Second Coordination Sphere in a Hangman-type Iron Porphyrin Complex Promotes HER: Insights via in Situ Raman Spectroelectrochemistry.

The iron-based porphyrin complex containing a bispyridine-based hanging unit termed Py2XPFe was previously used as an effective catalyst for the reduction of protons to molecular hydrogen in solution. Here, the molecular compound was immobilized on a modified gold electrode surface and investigated by spectroelectrochemical methods under catalytic conditions. Immobilization of the Py2XPFe was facilitated using a pyridine-based amine linker molecule grafted to the gold electrode by electrochemical amine oxidation. The linker molecule denoted in this report as Pyr-1 allows for effective coordination of the iron porphyrin compound to the modified gold surface through axial coordination of the pyridine component to the Fe center. Resonance Raman spectroelectrochemistry was performed on the immobilized catalyst in pH 7 buffer at increasing cathodic potentials. This facilitates the electrochemical hydrogen evolution reaction (HER) while concurrently allowing for the observation of the v4, v3, and v2 porphyrin marker bands, which are sensitive to oxidation and spin state changes at the metal center. The observed changes in these bands at decreasing potential indicate that the immobilized Py2XPFe exists in the formal high-spin FeIII state before being reduced to the low-spin FeII state resulting from axial interaction with the linker moiety. This FeII state likely acts as the precatalyst for the HER reaction. Surfaced enhanced Raman spectroelectrochemistry was also conducted on the system as the gold electrode provides a sufficient surface enhancement effect so as to observe the bonding nature of the pyridine substituents within the second coordination sphere. As the potential is lowered cathodically, the pyridine ring breathing modes at 999 cm-1 are shown to increase in intensity due to protonation, which reach an intensity saturated limit whereat HER is conducted. This suggests that in pH 7 buffer, the increase in cathodic potentials facilitates protonation of the pyridine-based second coordination sphere. The extent to which protonation occurs can be viewed as a function of decreasing potential due to an increase in proton flux at the immobilized catalyst which, at the required onset potential for catalysis, aids in the reduction of protons to molecular hydrogen.

Atomic-Scale Studies of Fe3 O4 (001) and TiO2 (110) Surfaces Following Immersion in CO2 -Acidified Water.

Difficulties associated with the integration of liquids into a UHV environment make surface-science style studies of mineral dissolution particularly challenging. Recently, we developed a novel experimental setup for the UHV-compatible dosing of ultrapure liquid water and studied its interaction with TiO2 and Fe3 O4 surfaces. Herein, we describe a simple approach to vary the pH through the partial pressure of CO2 ( p C O 2 ) in the surrounding vacuum chamber and use this to study how these surfaces react to an acidic solution. The TiO2 (110) surface is unaffected by the acidic solution, except for a small amount of carbonaceous contamination. The Fe3 O4 (001)-( 2 × 2 )R45° surface begins to dissolve at a pH 4.0-3.9 ( p C O 2 =0.8-1 bar) and, although it is significantly roughened, the atomic-scale structure of the Fe3 O4 (001) surface layer remains visible in scanning tunneling microscopy (STM) images. X-ray photoelectron spectroscopy (XPS) reveals that the surface is chemically reduced and contains a significant accumulation of bicarbonate (HCO3 - ) species. These observations are consistent with Fe(II) being extracted by bicarbonate ions, leading to dissolved iron bicarbonate complexes (Fe(HCO3 )2 ), which precipitate onto the surface when the water evaporates.

MRI evidence: acute mountain sickness is not associated with cerebral edema formation during simulated high altitude.

Acute mountain sickness (AMS) is a common condition among non-acclimatized individuals ascending to high altitude. However, the underlying mechanisms causing the symptoms of AMS are still unknown. It has been suggested that AMS is a mild form of high-altitude cerebral edema both sharing a common pathophysiological mechanism. We hypothesized that brain swelling and consequently AMS development is more pronounced when subjects exercise in hypoxia compared to resting conditions. Twenty males were studied before and after an eight hour passive (PHE) and active (plus exercise) hypoxic exposure (AHE) (F(i)O(2) = 11.0%, P(i)O(2)∼80 mmHg). Cerebral edema formation was investigated with a 1.5 Tesla magnetic resonance scanner and analyzed by voxel based morphometry (VBM), AMS was assessed using the Lake Louise Score. During PHE and AHE AMS was diagnosed in 50% and 70% of participants, respectively (p>0.05). While PHE slightly increased gray and white matter volume and the apparent diffusion coefficient, these changes were clearly more pronounced during AHE but were unrelated to AMS. In conclusion, our findings indicate that rest and especially exercise in normobaric hypoxia are associated with accumulation of water in the extracellular space, however independent of AMS development. Thus, it is suggested that AMS and HACE do not share a common pathophysiological mechanism.

Microorganisms degrading chlorobenzene via a meta-cleavage pathway harbor highly similar chlorocatechol 2,3-dioxygenase-encoding gene clusters.

Pseudomonas putida GJ31 harbors a degradative pathway for chlorobenzene via meta-cleavage of 3-chlorocatechol. Pseudomonads using this route for chlorobenzene degradation, which was previously thought to be generally unproductive, were isolated from various contaminated environments of distant locations. The new isolates, Pseudomonas fluorescens SK1 (DSM16274), Pseudomonas veronii 16-6A (DSM16273), Pseudomonas sp. strain MG61 (DSM16272), harbor a chlorocatechol 2,3-dioxygenase (CbzE). The cbzE-like genes were cloned, sequenced, and expressed from the isolates and a mixed culture. The chlorocatechol 2,3-dioxygenases shared 97% identical amino acids with CbzE from strain GJ31, forming a distinct family of catechol 2,3-dioxygenases. The chlorocatechol 2,3-dioxygenase, purified from chlorobenzene-grown cells of strain SK1, showed an identical N-terminal sequence with the amino acid sequence deduced from cloned cbzE. In all investigated chlorobenzene-degrading strains, cbzT-like genes encoding ferredoxins are located upstream of cbzE. The sequence data indicate that the ferredoxins are identical (one amino acid difference in CbzT of strain 16-6A compared to the others). In addition, the structure of the operon downstream of cbzE is identical in strains GJ31, 16-6A, and SK1 with genes cbzX (unknown function) and the known part of cbzG (2-hydroxymuconic semialdehyde dehydrogenase) and share 100% nucleotide sequence identity with the entire downstream region. The current study suggests that meta-cleavage of 3-chlorocatechol is not an atypical pathway for the degradation of chlorobenzene.

Degradation of aromatics and chloroaromatics by Pseudomonas sp. strain B13: cloning, characterization, and analysis of sequences encoding 3-oxoadipate:succinyl-coenzyme A (CoA) transferase and 3-oxoadipyl-CoA thiolase.

3-oxoadipate:succinyl-coenzyme A (CoA) transferase and 3-oxoadipyl-CoA thiolase carry out the ultimate steps in the conversion of benzoate and 3-chlorobenzoate to tricarboxylic acid cycle intermediates in bacteria utilizing the 3-oxoadipate pathway. This report describes the characterization of DNA fragments with the overall length of 5.9 kb from Pseudomonas sp. strain B13 that encode these enzymes. DNA sequence analysis revealed five open reading frames (ORFs) plus an incomplete one. ORF1, of unknown function, has a length of 414 bp. ORF2 (catI) encodes a polypeptide of 282 amino acids and starts at nucleotide 813. ORF3 (catJ) encodes a polypeptide of 260 amino acids and begins at nucleotide 1661. CatI and CatJ are the subunits of the 3-oxoadipate:succinyl-CoA transferase, whose activity was demonstrated when both genes were ligated into expression vector pET11a. ORF4, termed catF, codes for a protein of 401 amino acid residues with a predicted mass of 41,678 Da with 3-oxoadipyl-CoA thiolase activity. The last three ORFs seem to form an operon since they are oriented in the same direction and showed an overlapping of 1 bp between catI and catJ and of 4 bp between catJ and catF. Conserved functional groups important for the catalytic activity of CoA transferases and thiolases were identified in CatI, CatJ, and CatF. ORF5 (catD) encodes the 3-oxoadipate enol-lactone hydrolase. An incomplete ORF6 of 1,183 bp downstream of ORF5 and oriented in the opposite direction was found. The protein sequence deduced from ORF6 showed a putative AMP-binding domain signature.