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1.
Sci Rep ; 13(1): 12591, 2023 08 03.
Artigo em Inglês | MEDLINE | ID: mdl-37537268

RESUMO

Moonlighting genes encode for single polypeptide molecules that perform multiple and often unrelated functions. These genes occur across all domains of life. Their ubiquity and functional diversity raise many questions as to their origins, evolution, and role in the cell cycle. In this study, we present a simple bioinformatics probe that allows us to rank genes by antisense translation potential, and we show that this probe enriches, reliably, for moonlighting genes across a variety of organisms. We find that moonlighting genes harbor putative antisense open reading frames (ORFs) rich in codons for non-polar amino acids. We also find that moonlighting genes tend to co-locate with genes involved in cell wall, cell membrane, or cell envelope production. On the basis of this and other findings, we offer a model in which we propose that moonlighting gene products are likely to escape the cell through gaps in the cell wall and membrane, at wall/membrane construction sites; and we propose that antisense ORFs produce "membrane-sticky" protein products, effectively binding moonlighting-gene DNA to the cell membrane in porous areas where intensive cell-wall/cell-membrane construction is underway. This leads to high potential for escape of moonlighting proteins to the cell surface. Evolutionary and other implications of these findings are discussed.


Assuntos
Biologia Computacional , Proteínas de Membrana , Proteínas de Membrana/genética , Fases de Leitura Aberta/genética , Códon , Membrana Celular
2.
Acta Trop ; 237: 106723, 2023 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-36283498

RESUMO

Onchocerca lupi is a vector-borne filaroid which affects wild (i.e., wolves, coyotes) and domestic carnivores (i.e., dogs, cats), and occasionally humans. This nematode causes ocular damage due to the location of adult worms embedded in the eye connective tissues. Several human cases of onchocercosis by O. lupi have been reported in Europe, Asia, north Africa, and the USA where the infection thrives in dogs and less frequently in cats. In this study, we review clinical aspects of feline infestation by O. lupi, and report the first case of this onchocercid in a cat from Romania, showing a subconjunctival mass located at the medial canthus of the right eye; worms were surgically removed from the ocular nodule and morphologically and molecularly identified. Lesions were examined and characterized using histological procedures. Nematodes were identified as O. lupi based on their morphology at the direct observation as well as at the histological examination. Molecular and phylogenetic analysis confirmed the identification of this onchocercid, with the cox 1 sequence obtained clustering with those available in public repositories, including isolates from dogs and cats from Europe and USA. Despite the few reports available on the occurrence of this parasite on domestic cats, these felines are regarded as potential hosts of O. lupi in Portugal and USA. Moreover, the spread of feline ocular onchocercosis in Eastern Europe countries draw attention on the need of additional studies to confirm the potential vectors involved in its transmission cycle.


Assuntos
Doenças do Gato , Doenças do Cão , Oncocercose Ocular , Adulto , Gatos , Animais , Cães , Humanos , Onchocerca/genética , Filogenia , Doenças do Cão/parasitologia
3.
Chaos ; 30(3): 033119, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-32237773

RESUMO

Here, we describe a general-purpose prediction model. Our approach requires three matrices of equal size and uses two equations to determine the behavior against two possible outcomes. We use an example based on photon-pixel coupling data to show that in humans, this solution can indicate the predisposition to disease. An implementation of this model is made available in the supplementary material.


Assuntos
Modelos Teóricos , Redes Neurais de Computação
4.
Pharmacol Res ; 150: 104522, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31698065

RESUMO

Diabetes mellitus (DM) is a complex syndrome with debilitating long-term complications, comprising alterations of carbohydrate, protein and lipid metabolisms, along increased oxidative stress and chronic low-grade inflammation. Diet management and plant-based formulations can improve the metabolic status of patients, being used as adjuvants of classic antidiabetic therapy. The purpose of our study was to evaluate the impact of a plant-based antidiabetic formulation (PBAF), containing Vaccinium myrtillus, Ribes nigrum, Rosa canina and Capsicum annuum, on the increased oxidative burden found in diabetes mellitus, comparing it with the effects of metformin and gliclazide. Firstly, we characterized the individual plant-derived components of this formulation and also assessed their in vitro radical scavenging capacity. We devised a preclinical study protocol to examine the impact of the PBAF, along metformin and gliclazide, on tissue histology as well as on the redox status of tissue, mitochondria, serum and serum lipoproteins of alloxan-induced diabetic Wistar rats. Subsequently, we assessed their long-term impact on the redox status of serum and isolated serum lipoproteins of type 2 DM (T2DM) patients, taking into consideration their cardiometabolic profile. In the preclinical stage, we found that PBAF was able to enhance total serum antioxidant defense, while metformin yielded the best results regarding the advanced glycation and protein/lipid oxidation of serum and of serum lipoproteins. The latter also improved overall serum redox status and HDL redox function. Also, antidiabetic treatment seemed to increase mitochondrial redox activity, without overturning overall tissue redox balance. Histologically, liver and brain tissues of treated diabetic rats were fairly similar to those of non-diabetic rats. In T2DM patients, the most striking results involved the effects on serum lipoproteins. The tested PBAF exerted protective antioxidant effects on low-density and, especially, on high density lipoproteins. We conclude that this formulation might constitute a good addition to the well-established pharmacological approach of DM, contributing to the reduction of overall oxidative burden.


Assuntos
Diabetes Mellitus Experimental/tratamento farmacológico , Diabetes Mellitus Tipo 2/tratamento farmacológico , Hipoglicemiantes/uso terapêutico , Magnoliopsida , Extratos Vegetais/uso terapêutico , Idoso , Animais , Glicemia/efeitos dos fármacos , Encéfalo/efeitos dos fármacos , Encéfalo/patologia , Diabetes Mellitus Experimental/sangue , Diabetes Mellitus Experimental/patologia , Diabetes Mellitus Tipo 2/sangue , Diabetes Mellitus Tipo 2/patologia , Feminino , Flavonoides/análise , Flavonoides/uso terapêutico , Frutas/química , Gliclazida/uso terapêutico , Humanos , Fígado/efeitos dos fármacos , Fígado/patologia , Masculino , Metformina/uso terapêutico , Pessoa de Meia-Idade , Estresse Oxidativo/efeitos dos fármacos , Fitoterapia , Extratos Vegetais/química , Polifenóis/análise , Polifenóis/uso terapêutico , Ratos Wistar
5.
MethodsX ; 6: 968-979, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31080760

RESUMO

Here we describe a novel prototype method for parallel sampling of electrical signals from 200 sensors. The amplified signal from each sensor was remotely converted into a luminous signal on a LED matrix. A digital camera supported by a duralumin skeleton, was installed at 15 cm above an LED matrix inside an opaque box. Images were sampled at discrete time intervals of 5 s. A total of 25,920 images of the LED matrix have been recorded. Thus, 5.2 million measurements have been recorded as light intensities from the LED matrix. Light intensities of individual LEDs from the images were converted into 1 pixel value/LED. Each pixel value was then converted into percentages for evaluation. We used this methodology to measure the temporal variation of the electrical current on the skin of the torso on human volunteers, to assess the presence of a correlation between the electrical activity and diabetes (Ionescu-Tirgoviste et al., 2018). This method also allowed us to compile the first high resolution map of the electrical activity generated by the human skin (Ionescu-Tirgoviste et al., 2018). •A novel method for a parallel acquisition of electrical signals which can be applied in any related field.•It provides the ability to retrieve a large number of electrical channels simultaneously.•It provides for an inexpensive and reliable way to digitize hundreds to thousands of channels at video rate frequencies.

6.
Data Brief ; 21: 795-832, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30417042

RESUMO

Here, data related to the electrical activity of the human skin are presented in detail. The 3D electrical activity maps in normal and diabetic individuals are shown and described using raw data obtained with Photon-Pixel coupling. Average electrical activity matrices are shown by subject, gender and group. Distributions of the electrical activity data are shown in connection with the ventral and dorsal side of the human torso. For a better understanding of the electrical activity data, critical parameters of the individuals that participated in the study are also presented.

7.
Biosens Bioelectron ; 120: 188-194, 2018 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-30193191

RESUMO

The human skin is not only the largest organ, but also the most important candidate for novel non-invasive methods of investigation. Here we describe a large-scale prototype for determining the real-time distribution of the electrical activity from the surface of the human skin. A collection of 200 sensors have been placed across the entire trunk surface. The output of each sensor was remotely inserted into a 20 × 10 LED matrix for a parallel capture of the signals. Continuous observations of the electrical activity pattern were made above the LED matrix by a digital camera in an obscure environment. A total of 5.2 million measurements (25,920 maps) have been recorded as light intensities from the LED matrix and converted into percentages for evaluation. A total of 36 individuals were divided equally into two groups and subjected to a short glucose tolerance test for 1 h; one group with established Type 2 Diabetes (T2D) and the other group without diabetes. The electrical activity pattern and the average signal intensity of normal individuals (37% ±â€¯8.1) and diabetic individuals (58% ±â€¯7.8), showed a significant difference of 21%. The average signal intensity on the ventral side (VS) and dorsal side (DS) of the torso exhibited different behaviors in diabetics and non-diabetics. On average, diabetic individuals have shown an electrical activity of higher intensity on DS (DS = 60%, VS = 55%), while the normal group has shown a higher intensity on VS (DS = 36%, VS = 39%).


Assuntos
Técnicas Biossensoriais/métodos , Diabetes Mellitus Tipo 2/diagnóstico , Fenômenos Eletrofisiológicos/fisiologia , Pele/química , Humanos
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