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1.
An Acad Bras Cienc ; 95(1): e20220381, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37162088

RESUMO

In this work, algorithms have been developed to: 1. Compare visual field coordinate data, presented in different representation systems; 2. Determine the distance in degrees between any two points in the visual field; 3. Predict new coordinates of a given point in the visual field after the rotation of the head, around axes that pass through the nodal point of the eye. Formulas are proposed for the transformation of Polar coordinates into Zenithal Equatorial coordinates and vice versa; of Polar coordinates into Gnomic Equatorial of double meridians and vice versa; and projections of double meridians system into Zenithal Equatorial and vice versa. Using the transformation of polar coordinates into Cartesian coordinates, we can also propose algorithms for rotating the head or the visual field representation system around the dorsoventral, lateral-lateral and anterior-posterior axes, in the mediolateral, dorsoventral and clockwise directions, respectively. In addition, using the concept of the scalar product in linear algebra, we propose new algorithms for calculating the distance between two points and to determine the area of receptive fields in the visual field.


Assuntos
Neurofisiologia , Campos Visuais , Algoritmos , Fator de Crescimento Transformador beta
2.
Comput Biol Med ; 140: 105095, 2021 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-34902610

RESUMO

BACKGROUND: Liver segmentation is a fundamental step in the treatment planning and diagnosis of liver cancer. However, manual segmentation of liver is time-consuming because of the large slice quantity and subjectiveness associated with the specialist's experience, which can lead to segmentation errors. Thus, the segmentation process can be automated using computational methods for better time efficiency and accuracy. However, automatic liver segmentation is a challenging task, as the liver can vary in shape, ill-defined borders, and lesions, which affect its appearance. We aim to propose an automatic method for liver segmentation using computed tomography (CT) images. METHODS: The proposed method, based on deep convolutional neural network models and image processing techniques, comprise of four main steps: (1) image preprocessing, (2) initial segmentation, (3) reconstruction, and (4) final segmentation. RESULTS: We evaluated the proposed method using 131 CT images from the LiTS image base. An average sensitivity of 95.45%, an average specificity of 99.86%, an average Dice coefficient of 95.64%, an average volumetric overlap error (VOE) of 8.28%, an average relative volume difference (RVD) of -0.41%, and an average Hausdorff distance (HD) of 26.60 mm were achieved. CONCLUSIONS: This study demonstrates that liver segmentation, even when lesions are present in CT images, can be efficiently performed using a cascade approach and including a reconstruction step based on deep convolutional neural networks.

3.
Comput Methods Programs Biomed ; 208: 106259, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-34273674

RESUMO

BACKGROUND AND OBJECTIVES: Pneumonia is a disease that affects the lungs, making breathing difficult. Nowadays, pneumonia is the disease that kills the most children under the age of five in the world, and if no action is taken, pneumonia is estimated to kill 11 million children by the year 2030. Knowing that rapid and accurate diagnosis of pneumonia is a significant factor in reducing mortality, acceleration, or automation of the diagnostic process is highly desirable. The use of computational methods can decrease specialists' workload and even offer a second opinion, increasing the number of accurate diagnostics. METHODS: This work proposes a method for constructing a specific convolutional neural network architecture to detect pneumonia and classify viral and bacterial types using Bayesian optimization from pre-trained networks. RESULTS: The results obtained are promising, in the order of 0.964 accuracy for pneumonia detection and 0.957 accuracy for pneumonia type classification. CONCLUSION: This research demonstrated the efficiency of CNN architecture estimation for detecting and diagnosing pneumonia using Bayesian optimization. The proposed network proved to have promising results, despite not using common preprocessing techniques such as histogram equalization and lung segmentation. This fact shows that the proposed method provides efficient and high-performance neural networks since image preprocessing is unnecessary.


Assuntos
Aprendizado Profundo , Pneumonia , Teorema de Bayes , Criança , Humanos , Pulmão/diagnóstico por imagem , Redes Neurais de Computação , Pneumonia/diagnóstico por imagem
4.
Expert Syst Appl ; 183: 115452, 2021 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-34177133

RESUMO

The COVID-19 pandemic, which originated in December 2019 in the city of Wuhan, China, continues to have a devastating effect on the health and well-being of the global population. Currently, approximately 8.8 million people have already been infected and more than 465,740 people have died worldwide. An important step in combating COVID-19 is the screening of infected patients using chest X-ray (CXR) images. However, this task is extremely time-consuming and prone to variability among specialists owing to its heterogeneity. Therefore, the present study aims to assist specialists in identifying COVID-19 patients from their chest radiographs, using automated computational techniques. The proposed method has four main steps: (1) the acquisition of the dataset, from two public databases; (2) the standardization of images through preprocessing; (3) the extraction of features using a deep features-based approach implemented through the networks VGG19, Inception-v3, and ResNet50; (4) the classifying of images into COVID-19 groups, using eXtreme Gradient Boosting (XGBoost) optimized by particle swarm optimization (PSO). In the best-case scenario, the proposed method achieved an accuracy of 98.71%, a precision of 98.89%, a recall of 99.63%, and an F1-score of 99.25%. In our study, we demonstrated that the problem of classifying CXR images of patients under COVID-19 and non-COVID-19 conditions can be solved efficiently by combining a deep features-based approach with a robust classifier (XGBoost) optimized by an evolutionary algorithm (PSO). The proposed method offers considerable advantages for clinicians seeking to tackle the current COVID-19 pandemic.

5.
PLoS One ; 16(5): e0251591, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33989316

RESUMO

Age-related macular degeneration (AMD) is an eye disease that can cause visual impairment and affects the elderly over 50 years of age. AMD is characterized by the presence of drusen, which causes changes in the physiological structure of the retinal pigment epithelium (RPE) and the boundaries of the Bruch's membrane layer (BM). Optical coherence tomography is one of the main exams for the detection and monitoring of AMD, which seeks changes through the evaluation of successive sectional cuts in the search for morphological changes caused by drusen. The use of CAD (Computer-Aided Detection) systems has contributed to increasing the chances of correct detection, assisting specialists in diagnosing and monitoring disease. Thus, the objective of this work is to present a method for the segmentation of the inner limiting membrane (ILM), retinal pigment epithelium, and Bruch's membrane in OCT images of healthy and Intermediate AMD patients. The method uses two deep neural networks, U-Net and DexiNed to perform the segmentation. The results were promising, reaching an average absolute error of 0.49 pixel for ILM, 0.57 for RPE, and 0.66 for BM.


Assuntos
Degeneração Macular/diagnóstico por imagem , Retina/diagnóstico por imagem , Tomografia de Coerência Óptica/métodos , Idoso , Idoso de 80 Anos ou mais , Lâmina Basilar da Corioide/diagnóstico por imagem , Humanos , Processamento de Imagem Assistida por Computador/métodos , Pessoa de Meia-Idade , Epitélio Pigmentado da Retina/diagnóstico por imagem
6.
IEEE J Biomed Health Inform ; 24(12): 3491-3498, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32976110

RESUMO

Dry eye syndrome is one of the most frequently reported eye diseases in ophthalmological practice. The diagnosis of this disease is a challenging task due to its multifactorial etiology. One of the most applied tests is the manual classification of tear film images captured with the Doane interferometer. The interference phenomena in these images can be characterized as texture patterns, which can be automatically classified into one of the following categories: strong fringes, coalescing strong fringes, fine fringes, coalescing fine fringes, and debris. This work presents a method for classifying tear film images based on texture analysis using phylogenetic diversity indexes and Ripley's K function. The proposed method consists of six main steps: acquisition of the image dataset; segmentation of the region of interest; feature extraction using phylogenetic diversity indexes and Ripley's K function; feature selection using Greedy Stepwise; classification using the algorithms Support Vector Machine (SVM), Random Forest (RF), Naive Bayes (NB), Multilayer Perceptron (MLP), Random Tree (RT) and Radial Basis Function Network (RBFNet); and (6) validation of results. The best result, using the RF classifier, we obtained classification rates higher than 99% of accuracy with 0.843% of standard deviation, 0.999 of the area under the Receiver Operating Characteristics (ROC) curve, 0.995 of Kappa and 0.996 of F-Measure. The experimental results demonstrate that the proposed method is promising and can potentially be used by experts to accurately diagnose dry eye syndrome in tear film images.


Assuntos
Síndromes do Olho Seco/diagnóstico por imagem , Interpretação de Imagem Assistida por Computador/métodos , Interferometria/métodos , Lágrimas/diagnóstico por imagem , Adolescente , Adulto , Algoritmos , Síndromes do Olho Seco/fisiopatologia , Humanos , Pessoa de Meia-Idade , Máquina de Vetores de Suporte , Lágrimas/fisiologia , Adulto Jovem
7.
Comput Biol Med ; 123: 103906, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32768047

RESUMO

BACKGROUND: The precise segmentation of kidneys and kidney tumors can help medical specialists to diagnose diseases and improve treatment planning, which is highly required in clinical practice. Manual segmentation of the kidneys is extremely time-consuming and prone to variability between different specialists due to their heterogeneity. Because of this hard work, computational techniques, such as deep convolutional neural networks, have become popular in kidney segmentation tasks to assist in the early diagnosis of kidney tumors. In this study, we propose an automatic method to delimit the kidneys in computed tomography (CT) images using image processing techniques and deep convolutional neural networks (CNNs) to minimize false positives. METHODS: The proposed method has four main steps: (1) acquisition of the KiTS19 dataset, (2) scope reduction using AlexNet, (3) initial segmentation using U-Net 2D, and (4) false positive reduction using image processing to maintain the largest elements (kidneys). RESULTS: The proposed method was evaluated in 210 CTs from the KiTS19 database and obtained the best result with an average Dice coefficient of 96.33%, an average Jaccard index of 93.02%, an average sensitivity of 97.42%, an average specificity of 99.94% and an average accuracy of 99.92%. In the KiTS19 challenge, it presented an average Dice coefficient of 93.03%. CONCLUSION: In our method, we demonstrated that the kidney segmentation problem in CT can be solved efficiently using deep neural networks to define the scope of the problem and segment the kidneys with high precision and with the use of image processing techniques to reduce false positives.


Assuntos
Redes Neurais de Computação , Tomografia Computadorizada por Raios X , Bases de Dados Factuais , Processamento de Imagem Assistida por Computador , Rim/diagnóstico por imagem
8.
Artif Intell Med ; 105: 101845, 2020 05.
Artigo em Inglês | MEDLINE | ID: mdl-32505426

RESUMO

Currently, breast cancer diagnosis is an extensively researched topic. An effective method to diagnose breast cancer is to use histopathological images. However, extracting features from these images is a challenging task. Thus, we propose a method that uses phylogenetic diversity indexes to characterize images for creating a model to classify histopathological breast images into four classes - invasive carcinoma, in situ carcinoma, normal tissue, and benign lesion. The classifiers used were the most robust ones according to the existing literature: XGBoost, random forest, multilayer perceptron, and support vector machine. Moreover, we performed content-based image retrieval to confirm the classification results and suggest a ranking for sets of images that were not labeled. The results obtained were considerably robust and proved to be effective for the composition of a CADx system to help specialists at large medical centers.


Assuntos
Neoplasias da Mama , Mama/diagnóstico por imagem , Neoplasias da Mama/diagnóstico por imagem , Feminino , Humanos , Redes Neurais de Computação , Filogenia , Máquina de Vetores de Suporte
9.
Comput Methods Programs Biomed ; 188: 105269, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-31846832

RESUMO

Background and Objective Dry eye syndrome disease negatively impacts many people in various ways. Several tests are required to diagnose it for evaluating different physiological characteristics. One of the most applied tests for this is the manual classification of tear film images captured with Doane interferometer. Interferometry images can be categorized into five groups: debris, fine fringes, coalescing fine fringes, strong fringes, and coalescing strong fringes. Instability in the tear film creates the need for an automatic system to provide experts with diagnostic support. Therefore, the purpose of this study was to propose a method for automatic classification of the tear film lipid layer using phylogenetic diversity indexes for feature extraction and several classifiers. Methods The proposed method consisted of five main steps: (1) acquisition of VOPTICAL_GCU image dataset, (2) segmentation of the region of interest, (3) feature extraction using phylogenetic diversity indexes, (4) classification using the algorithms Support Vector Machines, Random Forest, Naive Bayes, Multilayer Perceptron, Random Tree, and RBFNetwork, and, (5) validation of results. Results The best result was obtained using Random Forest classifier, reaching an accuracy of over 97%, standard deviation of 0.51%, an area under the receiver operating characteristic curve of 0.99, a Kappa index of 0.96, and an F-Measure of 0.97. Conclusions The proposed method demonstrated that the tear film lipid layer classification problem can be resolved efficiently by using phylogenetic diversity indexes.


Assuntos
Síndromes do Olho Seco/diagnóstico por imagem , Interferometria , Reconhecimento Automatizado de Padrão , Lágrimas/fisiologia , Algoritmos , Teorema de Bayes , Simulação por Computador , Humanos , Processamento de Imagem Assistida por Computador , Lipídeos/química , Probabilidade , Curva ROC , Reprodutibilidade dos Testes , Escócia , Máquina de Vetores de Suporte
10.
Comput Biol Med ; 106: 114-125, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30711799

RESUMO

BACKGROUND: We propose a computational methodology capable of detecting and analyzing breast tumor habitats in images acquired by magnetic resonance imaging with dynamic contrast enhancement (DCE-MRI), based on the pathophysiological behavior of the contrast agent (CA). METHODS: The proposed methodology comprises three steps. In summary, the first step is the acquisition of images from the Quantitative Imaging Network Breast. In the second step, the segmentation of the breasts is performed to remove the background, noise, and other unwanted objects from the image. In the third step, the generation of habitats is performed by applying two techniques: the molecular texture descriptor (MTD) that highlights the CA regions in the breast, and pathophysiological texture mapping (MPT), which generates tumor habitats based on the behavior of the CA. The combined use of these two techniques allows the automatic detection of tumors in the breast and analysis of each separate habitat with respect to their malignancy type. RESULTS: The results found in this study were promising, with 100% of breast tumors being identified. The segmentation results exhibited an accuracy of 99.95%, sensitivity of 71.07%, specificity of 99.98%, and volumetric similarity of 77.75%. Moreover, we were able to classify the malignancy of the tumors, with 6 classified as malignant type III (WashOut) and 14 as malignant type II (Plateau), for a total of 20 cases. CONCLUSION: We proposed a method for the automatic detection of tumors in the breast in DCE-MRI and performed the pathophysiological mapping of tumor habitats by analyzing the behavior of the CA, combining MTD and MPT, which allowed the mapping of internal tumor habitats.


Assuntos
Neoplasias da Mama/diagnóstico por imagem , Mama/diagnóstico por imagem , Interpretação de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Mama/patologia , Neoplasias da Mama/patologia , Bases de Dados Factuais , Feminino , Humanos , Sensibilidade e Especificidade
11.
IEEE Trans Image Process ; 28(4): 1813-1823, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30387727

RESUMO

Lung cancer is the type of cancer that most often kills after the initial diagnosis. To aid the specialist in its diagnosis, temporal evaluation is a potential tool for analyzing indeterminate lesions, which may be benign or malignant, during treatment. With this goal in mind, a methodology is herein proposed for the analysis, quantification, and visualization of changes in lung lesions. This methodology uses a modified version of the quality threshold clustering algorithm to associate each voxel of the lesion to a cluster, and changes in the lesion over time are defined in terms of voxel moves to another cluster. In addition, statistical features are extracted for classification of the lesion as benign or malignant. To develop the proposed methodology, two databases of pulmonary lesions were used, one for malignant lesions in treatment (public) and the other for indeterminate cases (private). We determined that the density change percentage varied from 6.22% to 36.93% of lesion volume in the public database of malignant lesions under treatment and from 19.98% to 38.81% in the private database of lung nodules. Additionally, other inter-cluster density change measures were obtained. These measures indicate the degree of change in the clusters and how each of them is abundant in relation to volume. From the statistical analysis of regions in which the density changes occurred, we were able to discriminate lung lesions with an accuracy of 98.41%, demonstrating that these changes can indicate the true nature of the lesion. In addition to visualizing the density changes occurring in lesions over time, we quantified these changes and analyzed the entire set through volumetry, which is the technique most commonly used to analyze changes in pulmonary lesions.


Assuntos
Interpretação de Imagem Assistida por Computador/métodos , Neoplasias Pulmonares/diagnóstico por imagem , Algoritmos , Análise por Conglomerados , Bases de Dados Factuais , Humanos , Pulmão/diagnóstico por imagem , Fatores de Tempo , Tomografia Computadorizada por Raios X
12.
Comput Methods Programs Biomed ; 162: 109-118, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29903476

RESUMO

BACKGROUND AND OBJECTIVE: Detection of lung nodules is critical in CAD systems; this is because of their similar contrast with other structures and low density, which result in the generation of numerous false positives (FPs). Therefore, this study proposes a methodology to reduce the FP number using a deep learning technique in conjunction with an evolutionary technique. METHOD: The particle swarm optimization (PSO) algorithm was used to optimize the network hyperparameters in the convolutional neural network (CNN) in order to enhance the network performance and eliminate the requirement of manual search. RESULTS: The methodology was tested on computed tomography (CT) scans from the Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI) with the highest accuracy of 97.62%, sensitivity of 92.20%, specificity of 98.64%, and area under the receiver operating characteristic (ROC) curve of 0.955. CONCLUSION: The results demonstrate the high performance-potential of the PSO algorithm in the identification of optimal CNN hyperparameters for lung nodule candidate classification into nodules and non-nodules, increasing the sensitivity rates in the FP reduction step of CAD systems.


Assuntos
Pulmão/diagnóstico por imagem , Rede Nervosa , Nódulo Pulmonar Solitário/diagnóstico por imagem , Tomografia Computadorizada por Raios X , Algoritmos , Área Sob a Curva , Bases de Dados Factuais , Reações Falso-Positivas , Humanos , Processamento de Imagem Assistida por Computador , Curva ROC , Interpretação de Imagem Radiográfica Assistida por Computador , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
13.
Med Biol Eng Comput ; 56(11): 2125-2136, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-29790102

RESUMO

Lung cancer presents the highest cause of death among patients around the world, in addition of being one of the smallest survival rates after diagnosis. Therefore, this study proposes a methodology for diagnosis of lung nodules in benign and malignant tumors based on image processing and pattern recognition techniques. Mean phylogenetic distance (MPD) and taxonomic diversity index (Δ) were used as texture descriptors. Finally, the genetic algorithm in conjunction with the support vector machine were applied to select the best training model. The proposed methodology was tested on computed tomography (CT) images from the Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI), with the best sensitivity of 93.42%, specificity of 91.21%, accuracy of 91.81%, and area under the ROC curve of 0.94. The results demonstrate the promising performance of texture extraction techniques using mean phylogenetic distance and taxonomic diversity index combined with phylogenetic trees. Graphical Abstract Stages of the proposed methodology.


Assuntos
Neoplasias Pulmonares/genética , Neoplasias Pulmonares/patologia , Pulmão/patologia , Algoritmos , Bases de Dados Factuais , Humanos , Reconhecimento Automatizado de Padrão/métodos , Filogenia , Curva ROC , Sensibilidade e Especificidade , Máquina de Vetores de Suporte , Taxa de Sobrevida , Tomografia Computadorizada por Raios X/métodos
14.
Comput Methods Programs Biomed ; 167: 49-63, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-29706405

RESUMO

BACKGROUND AND OBJECTIVE: White matter lesions are non-static brain lesions that have a prevalence rate up to 98% in the elderly population. Because they may be associated with several brain diseases, it is important that they are detected as soon as possible. Magnetic Resonance Imaging (MRI) provides three-dimensional data with the possibility to detect and emphasize contrast differences in soft tissues, providing rich information about the human soft tissue anatomy. However, the amount of data provided for these images is far too much for manual analysis/interpretation, representing a difficult and time-consuming task for specialists. This work presents a computational methodology capable of detecting regions of white matter lesions of the brain in MRI of FLAIR modality. The techniques highlighted in this methodology are SLIC0 clustering for candidate segmentation and convolutional neural networks for candidate classification. METHODS: The methodology proposed here consists of four steps: (1) images acquisition, (2) images preprocessing, (3) candidates segmentation and (4) candidates classification. RESULTS: The methodology was applied on 91 magnetic resonance images provided by DASA, and achieved an accuracy of 98.73%, specificity of 98.77% and sensitivity of 78.79% with 0.005 of false positives, without any false positives reduction technique, in detection of white matter lesion regions. CONCLUSIONS: It is demonstrated the feasibility of the analysis of brain MRI using SLIC0 and convolutional neural network techniques to achieve success in detection of white matter lesions regions.


Assuntos
Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética , Redes Neurais de Computação , Reconhecimento Automatizado de Padrão , Substância Branca/diagnóstico por imagem , Substância Branca/lesões , Algoritmos , Encéfalo/diagnóstico por imagem , Bases de Dados Factuais , Aprendizado Profundo , Diagnóstico por Computador , Reações Falso-Positivas , Humanos , Prevalência , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
15.
Comput Methods Programs Biomed ; 156: 191-207, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29428071

RESUMO

BACKGROUND AND OBJECTIVE: The processing of medical image is an important tool to assist in minimizing the degree of uncertainty of the specialist, while providing specialists with an additional source of detect and diagnosis information. Breast cancer is the most common type of cancer that affects the female population around the world. It is also the most deadly type of cancer among women. It is the second most common type of cancer among all others. The most common examination to diagnose breast cancer early is mammography. In the last decades, computational techniques have been developed with the purpose of automatically detecting structures that maybe associated with tumors in mammography examination. This work presents a computational methodology to automatically detection of mass regions in mammography by using a convolutional neural network. METHODS: The materials used in this work is the DDSM database. The method proposed consists of two phases: training phase and test phase. The training phase has 2 main steps: (1) create a model to classify breast tissue into dense and non-dense (2) create a model to classify regions of breast into mass and non-mass. The test phase has 7 step: (1) preprocessing; (2) registration; (3) segmentation; (4) first reduction of false positives; (5) preprocessing of regions segmented; (6) density tissue classification (7) second reduction of false positives where regions will be classified into mass and non-mass. RESULTS: The proposed method achieved 95.6% of accuracy in classify non-dense breasts tissue and 97,72% accuracy in classify dense breasts. To detect regions of mass in non-dense breast, the method achieved a sensitivity value of 91.5%, and specificity value of 90.7%, with 91% accuracy. To detect regions in dense breasts, our method achieved 90.4% of sensitivity and 96.4% of specificity, with accuracy of 94.8%. CONCLUSIONS: According to the results achieved by CNN, we demonstrate the feasibility of using convolutional neural networks on medical image processing techniques for classification of breast tissue and mass detection.


Assuntos
Neoplasias da Mama/diagnóstico por imagem , Mama/diagnóstico por imagem , Processamento de Imagem Assistida por Computador/métodos , Mamografia/métodos , Algoritmos , Densidade da Mama , Diagnóstico por Computador/métodos , Reações Falso-Positivas , Feminino , Humanos , Modelos Estatísticos , Redes Neurais de Computação , Interpretação de Imagem Radiográfica Assistida por Computador/métodos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
16.
J Digit Imaging ; 30(6): 812-822, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28526968

RESUMO

Lung cancer is pointed as the major cause of death among patients with cancer throughout the world. This work is intended to develop a methodology for diagnosis of lung nodules using images from the Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI). The proposed methodology uses image processing and pattern recognition techniques. In order to differentiate between the patterns of malignant and benign nodules, we used phylogenetic diversity by means of particular indexes, that are: intensive quadratic entropy, extensive quadratic entropy, average taxonomic distinctness, total taxonomic distinctness, and pure diversity indexes. After that, we applied the genetic algorithm for selection of the best model. In the tests' stage, we applied the proposed methodology to 1405 (394 malignant and 1011 benign) nodules. The proposed work presents promising results at the classification into malignant and benign, achieving accuracy of 92.52%, sensitivity of 93.1% and specificity of 92.26%. The results demonstrated a good rate of correct detections using texture features. Since a precocious detection allows a faster therapeutic intervention, thus a more favorable prognostic to the patient, we propose herein a methodology that contributes to the area in this aspect.


Assuntos
Diagnóstico por Computador/métodos , Neoplasias Pulmonares/diagnóstico por imagem , Neoplasias Pulmonares/genética , Nódulo Pulmonar Solitário/diagnóstico por imagem , Máquina de Vetores de Suporte , Tomografia Computadorizada por Raios X/métodos , Variação Genética/genética , Humanos , Processamento de Imagem Assistida por Computador/métodos , Pulmão/diagnóstico por imagem , Reconhecimento Automatizado de Padrão/métodos , Filogenia , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
17.
Comput Methods Programs Biomed ; 140: 295-305, 2017 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-28254087

RESUMO

BACKGROUND AND OBJECTIVE: Medical image processing can contribute to the detection and diagnosis of human body anomalies, and it represents an important tool to assist in minimizing the degree of uncertainty of any diagnosis, while providing specialists with an additional source of diagnostic information. Strabismus is an anomaly that affects approximately 4% of the population. Strabismus modifies vision such that the eyes do not properly align, influencing binocular vision and depth perception. Additionally, it results in aesthetic problems, which can be reversed at any age. However, the use of low cost computational resources to assist in the diagnosis and treatment of strabismus is not yet widely available. This work presents a computational methodology to automatically diagnose strabismus through digital videos featuring a cover test using only a workstation computer to process these videos. METHODS: The method proposed was validated in patients with exotropia and consists of eight steps: (1) acquisition, (2) detection of the region surrounding the eyes, (3) identification of the location of the pupil, (4) identification of the location of the limbus, (5) eye movement tracking, (6) detection of the occluder, (7) identification of evidence of the presence of strabismus, and (8) diagnosis. RESULTS: To detect the presence of strabismus, the proposed method achieved a specificity value of 100%, and (2) a sensitivity value of 80%, with 93.33% accuracy in diagnosis of patients with extropia. This procedure was recognized to diagnose strabismus with an accuracy value of 87%, while acknowledging measures lower than 1Δ, and an average error in the deviation measure of 2.57Δ. CONCLUSIONS: We demonstrated the feasibility of using computational resources based on image processing techniques to achieve success in diagnosing strabismus by using the cover test. Despite the promising results the proposed method must be validated in a greater volume of video including other types of strabismus.


Assuntos
Estrabismo/diagnóstico , Movimentos Oculares , Feminino , Humanos , Masculino , Estrabismo/diagnóstico por imagem , Estrabismo/fisiopatologia
18.
Comput Methods Programs Biomed ; 142: 55-72, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-28325447

RESUMO

BACKGROUND AND OBJECTIVE: Lung cancer remains one of the most common cancers globally. Temporal evaluation is an important tool for analyzing the malignant behavior of lesions during treatment, or of indeterminate lesions that may be benign. This work proposes a methodology for the analysis, quantification, and visualization of small (local) and large (global) changes in lung lesions. In addition, we extract textural features for the classification of lesions as benign or malignant. METHODS: We employ the statistical concept of uncertainty to associate each voxel of a lesion to a probability that changes occur in the lesion over time. We employ the Jensen divergence and hypothesis test locally to verify voxel-to-voxel changes, and globally to capture changes in lesion volumes. RESULTS: For the local hypothesis test, we determine that the change in density varies by between 3.84 and 40.01% of the lesion volume in a public database of malignant lesions under treatment, and by between 5.76 and 35.43% in a private database of benign lung nodules. From the texture analysis of regions in which the density changes occur, we are able to discriminate lung lesions with an accuracy of 98.41%, which shows that these changes can indicate the true nature of the lesion. CONCLUSION: In addition to the visual aspects of the density changes occurring in the lesions over time, we quantify these changes and analyze the entire set using volumetry. In the case of malignant lesions, large b-divergence values are associated with major changes in lesion volume. In addition, this occurs when the change in volume is small but is associated with significant changes in density, as indicated by the histogram divergence. For benign lesions, the methodology shows that even in cases where the change in volume is small, a change of density occurs. This proves that even in lesions that appear stable, a change in density occurs.


Assuntos
Pneumopatias/diagnóstico por imagem , Pneumopatias/fisiopatologia , Estatística como Assunto , Algoritmos , Bases de Dados Factuais , Feminino , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Processamento de Imagem Assistida por Computador , Pulmão/fisiopatologia , Masculino , Modelos Estatísticos , Probabilidade , Reprodutibilidade dos Testes , Nódulo Pulmonar Solitário/diagnóstico por imagem , Nódulo Pulmonar Solitário/fisiopatologia , Fatores de Tempo , Resultado do Tratamento
19.
Med Biol Eng Comput ; 55(8): 1129-1146, 2017 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27699621

RESUMO

Lung cancer is the major cause of death among patients with cancer worldwide. This work is intended to develop a methodology for the diagnosis of lung nodules using images from the Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI). The proposed methodology uses image processing and pattern recognition techniques. To differentiate the patterns of malignant and benign forms, we used a Minkowski functional, distance measures, representation of the vector of points measures, triangulation measures, and Feret diameters. Finally, we applied a genetic algorithm to select the best model and a support vector machine for classification. In the test stage, we applied the proposed methodology to 1405 (394 malignant and 1011 benign) nodules from the LIDC-IDRI database. The proposed methodology shows promising results for diagnosis of malignant and benign forms, achieving accuracy of 93.19 %, sensitivity of 92.75 %, and specificity of 93.33 %. The results are promising and demonstrate a good rate of correct detections using the shape features. Because early detection allows faster therapeutic intervention, and thus a more favorable prognosis for the patient, herein we propose a methodology that contributes to the area.


Assuntos
Algoritmos , Reconhecimento Automatizado de Padrão/métodos , Interpretação de Imagem Radiográfica Assistida por Computador/métodos , Nódulo Pulmonar Solitário/diagnóstico por imagem , Nódulo Pulmonar Solitário/patologia , Máquina de Vetores de Suporte , Tomografia Computadorizada por Raios X/métodos , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Modelos Genéticos , Intensificação de Imagem Radiográfica/métodos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
20.
Med Biol Eng Comput ; 55(2): 295-314, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-27180182

RESUMO

Lung cancer remains as one of the most incident types of cancer throughout the world. Temporal evaluation has become a very useful tool when one wishes to analyze some malignancy-indicating behavior. The objective of the present work is to detect changes in the local densities of lung lesions over time (follow-up analysis). From the detected changes, local information as well as extent region of changes can complement the studies regarding the malignant or benign nature of the lesion. Based on this idea, we attempt to use techniques that allow the observation of changes in the lesion over time, based on remote sensing techniques which highlight changes occurring in the environment. The techniques used were the image differencing, image rationing, median filtering, image regression and the fuzzy XOR operator. Based on the global measurement of change percentage in the density, we found density variations which were considered significant in a range from 2.22 to 36.57 % of the volume of the lesion. The results achieved are promising since, besides the visual aspects of the changes in density of the lung lesion over time, we managed to quantify these changes and compare them by volumetric analysis, a more commonly used technique for analysis of changes in lung lesions.


Assuntos
Processamento de Imagem Assistida por Computador/métodos , Neoplasias Pulmonares/diagnóstico por imagem , Pulmão/diagnóstico por imagem , Pulmão/patologia , Tomografia Computadorizada por Raios X/métodos , Bases de Dados Factuais , Lógica Fuzzy , Humanos , Neoplasias Pulmonares/patologia
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