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1.
Oncotarget ; 8(20): 32608-32617, 2017 May 16.
Artigo em Inglês | MEDLINE | ID: mdl-28427233

RESUMO

To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.


Assuntos
Análise Mutacional de DNA/normas , Janus Quinase 2/genética , Laboratórios/normas , Transtornos Mieloproliferativos/genética , Análise Mutacional de DNA/métodos , Humanos , Itália , Janus Quinase 2/metabolismo , Laboratórios/estatística & dados numéricos , Mutação , Transtornos Mieloproliferativos/enzimologia , Variações Dependentes do Observador
2.
Haematologica ; 97(6): 849-53, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22207685

RESUMO

BACKGROUND: Characterization of the immunoglobulin gene repertoire has improved our understanding of the immunopathogenesis of lymphoid tumors. Early B-lymphocyte precursors of multiple myeloma are known to exist and might be susceptible to antigenic drive. DESIGN AND METHODS: To verify this hypothesis, we collected a database of 345 fully readable multiple myeloma immunoglobulin sequences. We characterized the immunoglobulin repertoire, analyzed the somatic hypermutation load, and investigated for stereotyped receptor clusters. RESULTS: Compared to the normal immunoglobulin repertoire, multiple myeloma displayed only modest differences involving only a few genes, showing that the myeloma immunoglobulin repertoire is the least skewed among mature B-cell tumors. Median somatic hypermutation load was 7.8%; median length of complementarity determining-region 3 was 15.5 amino acids. Clustering analysis showed the absence of myeloma specific clusters and no similarity with published chronic lymphocytic leukemia or lymphoma subsets. CONCLUSIONS: Analysis of multiple myeloma immunoglobulin repertoire does not support a pathogenetic role for antigen selection in this tumor.


Assuntos
Regiões Determinantes de Complementaridade/genética , Genes de Cadeia Pesada de Imunoglobulina/imunologia , Mieloma Múltiplo/genética , Proteínas do Mieloma/genética , Linfócitos B/imunologia , Linfócitos B/patologia , Regiões Determinantes de Complementaridade/química , Regiões Determinantes de Complementaridade/imunologia , Mineração de Dados , Bases de Dados de Ácidos Nucleicos , Humanos , Família Multigênica/imunologia , Mieloma Múltiplo/imunologia , Proteínas do Mieloma/química , Proteínas do Mieloma/imunologia , Análise de Sequência de DNA , Hipermutação Somática de Imunoglobulina/imunologia
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