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1.
J Phys Chem B ; 117(11): 3098-109, 2013 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-23477285

RESUMO

Amelogenins make up over 90% of the protein present during enamel formation and have been demonstrated to be critical in proper enamel development, but the mechanism governing this control is not well understood. Leucine-rich amelogenin peptide (LRAP) is a 59-residue splice variant of amelogenin and contains the charged regions from the full protein thought to control crystal regulation. In this work, we utilized neutron reflectivity (NR) to investigate the structure and orientation of LRAP adsorbed from solutions onto molecularly smooth COOH-terminated self-assembled monolayer (SAM) surfaces. Sedimentation velocity (SV) experiments revealed that LRAP is primarily a monomer in saturated calcium phosphate (SCP) solutions (0.15 M NaCl) at pH 7.4. LRAP adsorbed as ∼32 Šthick layers at ∼70% coverage as determined by NR. Rosetta simulations of the dimensions of LRAP in solution (37 Šdiameter) indicate that the NR determined z dimension is consistent with an LRAP monomer. SV experiments and Rosetta simulations show that the LRAP monomer has an extended, asymmetric shape in solution. The NR data suggests that the protein is not completely extended on the surface, having some degree of structure away from the surface. A protein orientation with the C-terminal and inner N-terminal regions (residues ∼8-24) located near the surface is consistent with the higher scattering length density (SLD) found near the surface by NR. This work presents new information on the tertiary and quaternary structure of LRAP in solution and adsorbed onto surfaces. It also presents further evidence that the monomeric species may be an important functional form of amelogenin proteins.


Assuntos
Proteínas do Esmalte Dentário/química , Adsorção , Sequência de Aminoácidos , Fosfatos de Cálcio/química , Proteínas do Esmalte Dentário/metabolismo , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Nêutrons , Estrutura Terciária de Proteína , Refratometria , Propriedades de Superfície
2.
3.
Bioorg Med Chem Lett ; 16(6): 1574-8, 2006 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-16386905
4.
J Med Chem ; 46(17): 3655-61, 2003 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-12904069

RESUMO

Novel quinolone antibacterial agents bearing (3S)-amino-(4R)-ethylpiperidines were designed by using low energy conformation analysis and synthesized by applying a conventional coupling reaction of the quinolone nuclei with new piperidine side chains. These compounds were tested in MIC assays and found to be highly potent against Gram-positive and Gram-negative organisms. In particular, the new compounds exhibited high activity against the resistant pathogens Staphylococcus aureus (MRCR) and Streptococcus pneumoniae (PR). Importantly, when the (3S)-amino-(4R)-ethylpiperidinyl quinolones were compared with marketed quinolones sharing the same quinolone nuclei but different side chains at the C-7 position, the new quinolones showed superior activity against Gram-positive organisms, including resistant pathogens.


Assuntos
Antibacterianos/síntese química , Bactérias/efeitos dos fármacos , Farmacorresistência Bacteriana , Piperidinas/síntese química , Quinolonas/síntese química , Antibacterianos/química , Antibacterianos/farmacologia , DNA Girase/química , DNA Girase/efeitos dos fármacos , DNA Super-Helicoidal/química , DNA Super-Helicoidal/efeitos dos fármacos , Escherichia coli/enzimologia , Bactérias Gram-Negativas/efeitos dos fármacos , Bactérias Gram-Positivas/efeitos dos fármacos , Testes de Sensibilidade Microbiana , Modelos Moleculares , Conformação Molecular , Piperidinas/química , Piperidinas/farmacologia , Quinolonas/química , Quinolonas/farmacologia , Estereoisomerismo , Relação Estrutura-Atividade
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