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1.
J Clin Virol ; 111: 4-11, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30580015

RESUMO

BACKGROUND: Viruses are the leading cause of acute gastroenteritis in children worldwide. Understanding of the occurrence and genetic diversity of these viruses can help to prevent infections. OBJECTIVES: The present study describes the presence, genetic diversity and possible recombination of five enteric viruses in children with gastroenteritis in Southwestern Nigeria. STUDY DESIGN: From August 2012 to December 2013, stool samples and sociodemographic data of 103 diarrheic children <5 years were collected to detect and characterize rotavirus A, norovirus, human astrovirus, aichivirus and sapovirus using PCR techniques followed by sequencing and phylogenetic analyses. RESULTS: At least one virus was identified in 58.3% (60/103) of the stool samples. Rotavirus, norovirus and astrovirus were detected in 39.8% (41/103), 10.7% (11/103), and 6.8% (7/103) respectively. Notably, aichivirus was detected for the first time in Nigeria (1/103; 0.97%). Sapovirus was not detected in the study. Co-infections with rotavirus were observed in eight samples either with norovirus or astrovirus or aichivirus. Phylogenetic analyses of different genome regions of norovirus positive samples provided indication for recombinant norovirus strains. A novel astrovirus strain closely related to canine astrovirus was identified and further characterized for the first time. CONCLUSIONS: Viruses are the common cause of acute gastroenteritis in Nigerian infants with rotavirus as most frequently detected pathogen. New norovirus recombinants and a not yet detected zoonotic astrovirus were circulating in Southwestern Nigeria, providing new information about emerging and unusual strains of viruses causing diarrhea.


Assuntos
Infecções por Astroviridae/epidemiologia , Astroviridae/classificação , Infecções por Caliciviridae/epidemiologia , Gastroenterite/epidemiologia , Kobuvirus/classificação , Norovirus/classificação , Animais , Astroviridae/isolamento & purificação , Pré-Escolar , Diarreia/virologia , Fezes/virologia , Feminino , Gastroenterite/virologia , Variação Genética , Humanos , Lactente , Recém-Nascido , Kobuvirus/isolamento & purificação , Masculino , Nigéria/epidemiologia , Norovirus/isolamento & purificação , Filogenia , Infecções por Picornaviridae/epidemiologia , RNA Viral/genética , Vírus Reordenados/classificação , Rotavirus/genética , Rotavirus/isolamento & purificação , Zoonoses/virologia
2.
Euro Surveill ; 22(4)2017 Jan 26.
Artigo em Inglês | MEDLINE | ID: mdl-28181902

RESUMO

Since early November 2016, the number of laboratory-confirmed norovirus infections reported in Germany has been increasing steeply. Here, we report the detection and genetic characterisation of an emerging norovirus recombinant, GII.P16-GII.2. This strain was frequently identified as the cause of sporadic cases as well as outbreaks in nine federal states of Germany. Our findings suggest that the emergence of GII.P16-GII.2 contributed to rising case numbers of norovirus gastroenteritis in Germany.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Gastroenterite/virologia , Genótipo , Norovirus/classificação , Norovirus/genética , Infecções por Caliciviridae/virologia , Criança , Pré-Escolar , Diarreia/epidemiologia , Diarreia/virologia , Notificação de Doenças/estatística & dados numéricos , Gastroenterite/epidemiologia , Variação Genética , Alemanha/epidemiologia , Humanos , Lactente , Norovirus/isolamento & purificação , Filogenia , RNA Viral/genética , Estações do Ano , Análise de Sequência de DNA
3.
Dalton Trans ; 45(21): 8869-74, 2016 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-27151679

RESUMO

Novel Cr(iii) catalysts supported by linear phosph(iii)azanes of the type R(1)R(2)N-P(Ph)-NR(3)-P(Ph)-NR(4)R(5) have been prepared, all of which, upon activation with MMAO-3A, are highly active for ethene tri-/tetramerization with considerable selectivity. The effect of ligand substitution as well as solvent on the catalytic performance has been examined.

4.
Rofo ; 187(9): 795-800, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26308535

RESUMO

PURPOSE: To evaluate the effect of an age-dependent D-Dimer cut-off in patients who underwent a computed tomography pulmonary angiogram (CTPA) for suspected pulmonary embolism (PE) Material and Methods: Retrospective application of an age-dependent D-dimer cut-off (age/100 in patients aged over 50) in 530 consecutive patients, both in- and outpatients, aged over 18, who underwent CTPA for suspected PE according to the guidelines. RESULTS: The application of an age-dependent D-dimer cut-off showed a now negative test-result in 17 of 530 patients (3.2%). The proportion was 4.1% (17 of 418) in patients aged over 50. None of these 17 cases was diagnosed with PE in CTPA, the false-negative rate was 0%. The effect could be seen in outpatients (14 of 377 [3.7%]) as well as in inpatients(3 of 153 [2.0%]) with no statistically significant difference (p > 0.05). CONCLUSION: The application of an age-dependent D-dimer cut-off as part of the guidline-based algorithm for suspected PE reduced the number of necessary CTPA in outpatients as well as in inpatients. KEY POINTS: The application of an age-dependent D-dimer cut-off reduces the number of CTPA as part of the diagnostic algorithm in patients suspected for PENo reduction in diagnostic safety was found. The age adjustement performed equally in outpatients and inpatients


Assuntos
Envelhecimento/sangue , Produtos de Degradação da Fibrina e do Fibrinogênio/análise , Uso Excessivo dos Serviços de Saúde/prevenção & controle , Embolia Pulmonar/sangue , Embolia Pulmonar/diagnóstico por imagem , Tomografia Computadorizada por Raios X/estatística & dados numéricos , Adolescente , Adulto , Distribuição por Idade , Idoso , Idoso de 80 Anos ou mais , Algoritmos , Biomarcadores/sangue , Feminino , Alemanha/epidemiologia , Humanos , Masculino , Uso Excessivo dos Serviços de Saúde/estatística & dados numéricos , Pessoa de Meia-Idade , Prevalência , Embolia Pulmonar/epidemiologia , Reprodutibilidade dos Testes , Medição de Risco , Sensibilidade e Especificidade , Procedimentos Desnecessários , Adulto Jovem
5.
J Biotechnol ; 191: 32-7, 2014 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-24874095

RESUMO

Transaminases from Aspergillus fumigatus ((R)-selective, AspFum), Ruegeria pomeroyi ((S)-selective, 3HMU) and Rhodobacter sphaeroides 2.4.1 ((S)-selective, 3I5T) were immobilized on chitosan with specific activities of 99, 157, and 163U/g and acceptable yields (54, 21, and 23%, respectively) for glutaraldehyde (GA) immobilization. Besides GA, also divinylsulfone was used as linker molecule leading to a similar efficient immobilization for two enzymes, GibZea and NeoFis, whereas GA was superior in the other cases. Storage of the GA-immobilized enzymes for one month resulted in increased relative activities between 120 and 180%. The thermal stability was improved, especially for the GA-immobilized AspFum compared to the free enzyme after incubation for 4h at 60°C (10% vs. 235% residual activity). Especially after incubation of AspFum (free or immobilized) for 2h at 50°C a strongly increased activity was observed (up to 359% of the initial activity). This effect was studied in more detail, revealing that one heat activation prior and one after immobilization increased the overall immobilization efficiency. Recycling of the immobilized ATAs resulted only in a small reduction of activity after four batches. Asymmetric synthesis of (R)- or (S)-1-methyl-3-phenylpropylamine from the prostereogenic ketone using isopropylamine (IPA) as amino donor was applied with conversions up to 50% (AspFum) or 75% (3HMU). Except for NeoFis, all immobilized ATAs showed higher conversions compared to the free enzyme.


Assuntos
Aminas/síntese química , Enzimas Imobilizadas/química , Propilaminas/química , Transaminases/química , Aminas/química , Biocatálise , Quitosana/química , Estabilidade Enzimática , Humanos , Cinética , Propilaminas/síntese química , Temperatura
6.
Epidemiol Infect ; 142(1): 63-74, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23517686

RESUMO

We analysed data on laboratory or epidemiologically confirmed cases (n = 856,539) and on outbreaks (n = 31,644) notified during week 31 (2001) to week 30 (2009), and performed molecular typing of specimens from 665 outbreaks. We aimed at identifying demographic and molecular characteristics to inform on potential additional approaches to prevent disease spread in the population. The mean incidence by norovirus season (week 31 in one year to week 30 in the following year) was 130 (range 19-300) cases/100,000 population and was highest in persons aged <5 years (430/100,000) and ≥ 75 years (593/100,000). The proportion hospitalized in community-acquired cases was 8-19% per season. The mean norovirus-associated mortality was 0.05/100,000 per season and 0.5/100,000 in the ≥ 75 years age group. Most outbreaks with known setting (75%) occurred in hospitals (32%), nursing homes (28%), households (24%) and childcare facilities (10%). GII strains dominated in the outbreak specimens. GII.4 strains were found in 82% of nursing home outbreaks, 85% of hospital outbreaks, and 33% of childcare facility and school outbreaks. Cases in younger individuals were notified earlier during the season than adult cases, and outbreaks in childcare facilities and schools preceded those in nursing/residential homes, hospitals and private households. We suggest future studies to investigate more closely potential transmission patterns between children and adults.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Gastroenterite/epidemiologia , Norovirus/isolamento & purificação , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Infecções por Caliciviridae/virologia , Criança , Pré-Escolar , Estudos de Coortes , Feminino , Gastroenterite/virologia , Alemanha/epidemiologia , Hospitalização , Humanos , Lactente , Masculino , Pessoa de Meia-Idade , Norovirus/genética , Vigilância em Saúde Pública
7.
J Clin Microbiol ; 46(9): 2959-65, 2008 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-18650354

RESUMO

The Foodborne Viruses in Europe network has developed integrated epidemiological and virological outbreak reporting with aggregation and sharing of data through a joint database. We analyzed data from reported outbreaks of norovirus (NoV)-caused gastroenteritis from 13 European countries (July 2001 to July 2006) for trends in time and indications of different epidemiology of genotypes and variants. Of the 13 countries participating in this surveillance network, 11 were capable of collecting integrated epidemiological and virological surveillance data and 10 countries reported outbreaks throughout the entire period. Large differences in the numbers and rates of reported outbreaks per country were observed, reflecting the differences in the focus and coverage of national surveillance systems. GII.4 strains predominated throughout the 5-year surveillance period, but the proportion of outbreaks associated with GII.4 rose remarkably during years in which NoV activity was particularly high. Spring and summer peaks indicated the emergence of genetically distinct variants within GII.4 across Europe and were followed by increased NoV activity during the 2002-2003 and 2004-2005 winter seasons. GII.4 viruses predominated in health care settings and in person-to-person transmission. The consecutive emergence of new GII.4 variants is highly indicative of immune-driven selection. Their predominance in health care settings suggests properties that facilitate transmission in settings with a high concentration of people such as higher virus loads in excreta or a higher incidence of vomiting. Understanding the mechanisms driving the changes in epidemiology and clinical impact of these rapidly evolving RNA viruses is essential to design effective intervention and prevention measures.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Doenças Transmitidas por Alimentos/epidemiologia , Gastroenterite/epidemiologia , Norovirus , Infecções por Caliciviridae/transmissão , Infecções por Caliciviridae/virologia , Notificação de Doenças , Europa (Continente)/epidemiologia , Doenças Transmitidas por Alimentos/virologia , Gastroenterite/virologia , Genótipo , Humanos , Análise Multivariada , Norovirus/genética
8.
Klin Monbl Augenheilkd ; 225(1): 66-9, 2008 Jan.
Artigo em Alemão | MEDLINE | ID: mdl-18236373

RESUMO

BACKGROUND: Mycophenolate mofetil (MMF) has gained acceptance as an immune modulatory agent in the treatment of autoimmune disorders such as uveitis. It represented a major advance, although optimal use may be limited, in particular, by gastrointestinal (GI) side effects in up to 50 % patients. This prospective study was undertaken to evaluate the effect of conversion from mycophenolate mofetil (MMF) to an enteric-coated mycophenolate sodium (EC-MPS). PATIENTS AND METHODS: Within a cohort of 143 patients treated with MMF we prospectively followed 19 individuals who developed gastrointestinal side effects. Because of limited treatment alternatives, conversion to an enteric-coated mycophenolate sodium (EC-MPS) was undertaken. A standardised questionnaire (GSRS) was completed by each patient regarding GI adverse events, at predefined intervals during the study. RESULTS: The spectrum of underlying disorders included uveitis (n = 16) and ocular cicatricial pemphigoid (n = 3) that were initially treated with MMF (1000 mg BID). All patients could be kept on EC-MPS treatment and followed with a mean follow-up of 44 weeks (median +/- 12). The maximum of scores on GSRS was reached at baseline (conversion to EC-MPS) in all but 3 patients. However, GSRS scores improved significantly between baseline and visit 4 (3 months) and remained stable further on (p < 0.03). In all but one (uveitis) patient the underlying disorders were under control demonstrating the similar efficacies of MMF and EC-MPS treatments. CONCLUSION: The use of EC-MPS appears to be a valid treatment option in ocular autoimmune disorders. In particular. patients with gastrointestinal problems may profit from a significantly reduced frequency of adverse events.


Assuntos
Doenças Autoimunes/tratamento farmacológico , Gastroenteropatias/induzido quimicamente , Gastroenteropatias/prevenção & controle , Ácido Micofenólico/análogos & derivados , Uveíte/tratamento farmacológico , Anti-Inflamatórios não Esteroides/administração & dosagem , Anti-Inflamatórios não Esteroides/efeitos adversos , Esquema de Medicação , Feminino , Humanos , Masculino , Ácido Micofenólico/administração & dosagem , Ácido Micofenólico/efeitos adversos , Resultado do Tratamento , Uveíte/complicações
9.
Epidemiol Infect ; 134(6): 1292-8, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-16650329

RESUMO

In April 2004, increased numbers of hepatitis A were noted in six neighbouring districts in Germany. Exploratory interviews showed that patients had consumed bakery products from company X where two employees had been diagnosed with hepatitis A in February. A case-control study of consumption of products of company X was carried out through telephone interviews. Altogether, 64 cases were identified. Fifty-two cases and 112 controls aged >or=16 years were included in the case-control study. In total, 46/52 cases and 37/112 controls had consumed company X products [odds ratio (OR) 15.5, 95% confidence interval (CI) 6.1-39.7]. Of these, 36/46 cases and 16/37 controls had consumed pastries (OR 4.7, 95% CI 1.8-12.3), 25/46 cases and 12/37 controls had consumed filled doughnuts (OR 2.5, 95% CI 1.0-6.1). Sequence analysis of the VP1-2A junction region indicated 100% strain homology between cases and an infected employee of company X. We recommended reinforcement of hygiene precautions, and consideration of a prolongation of compulsory work absence after post-exposure vaccination.


Assuntos
Surtos de Doenças , Microbiologia de Alimentos , Hepatite A/epidemiologia , Hepatovirus/genética , Estudos de Casos e Controles , Coleta de Dados , Doenças Transmitidas por Alimentos , Alemanha/epidemiologia , Hepatite A/transmissão , Hepatite A/virologia , Hepatovirus/isolamento & purificação , Humanos , Higiene , Entrevistas como Assunto
10.
Anaesthesist ; 55(4): 423-7, 2006 Apr.
Artigo em Alemão | MEDLINE | ID: mdl-16404582

RESUMO

A 62-year-old female suffered from therapy-resistant pain in the axilla after lymphadenectomy. The pain ranged from 8-10 on the numeric rating scale (NRS) despite multimodal pain therapy (non-steroid anti-rheumatics, opioids, physiotherapy, acupuncture). A paravertebral trial injection was performed preoperatively on the laminae of the thoracic vertebrae Th 2-Th 4. As the patient responded well, a paravertebral catheter was inserted close to Th 4 directly before the revision operation took place the following day. The case study describes the possibilities of eliminating pain segmentally in the axilla and an alternative technique to a paravertebral block (lamina technique).


Assuntos
Anestesia por Condução , Axila , Cateterismo/métodos , Dor Pós-Operatória/tratamento farmacológico , Vértebras Torácicas , Acupuntura , Analgésicos Opioides/uso terapêutico , Anti-Inflamatórios não Esteroides/uso terapêutico , Feminino , Humanos , Excisão de Linfonodo , Pessoa de Meia-Idade , Medição da Dor/efeitos dos fármacos , Modalidades de Fisioterapia , Reoperação
11.
Arch Virol ; 150(5): 929-47, 2005 May.
Artigo em Inglês | MEDLINE | ID: mdl-15645371

RESUMO

A German mining lake and the supplying surface waters, which are located downstream of a sewage plant, were examined regarding their microbiological and virological quality. Between October 2002 and September 2003, specific PCR methods were used to determine the occurrence of enteric viruses in 123 water specimens drawn at different sites downstream of the waste water treatment plant and in 9 samples from the sewage plant influent. Detection rates in sewage plant effluents and surface water samples depended on sampling sites and were: 29-76% for enterovirus (EntV), 24-42% (astrovirus, AstV), 15-53% (norovirus, NV), 3-24% (rotavirus, RoV), 5-20% (hepatitis A virus, HAV) and 20% (adenovirus, AdV). AstV genome load of selected samples was between 3.7 x 10(3) to 1.2 x 10(8) genome equivalents per liter (gen.equ./l), depending on sampling location; NV average genome load ranged from 1.8 x 10(4) to 9.7 x 10(5) gen.equ./l. Cell culture methods showed that three out of 18 PCR positive samples contained infectious EntV. Even though microbiological parameters such as Escherichia coli, enterococci and coliphages indicated acceptable microbiological water quality, the virological data of this study suggest the possibility that surface waters may be a source for enteric viral infections.


Assuntos
Adenovírus Humanos/isolamento & purificação , Enterovirus/isolamento & purificação , Água Doce/microbiologia , Água Doce/virologia , Vírus de RNA/isolamento & purificação , Adenovírus Humanos/classificação , Adenovírus Humanos/genética , Enterococcus/isolamento & purificação , Enterovirus/classificação , Enterovirus/genética , Escherichia coli/isolamento & purificação , Alemanha , Vírus da Hepatite A/classificação , Vírus da Hepatite A/genética , Vírus da Hepatite A/isolamento & purificação , Humanos , Indicadores e Reagentes , Mamastrovirus/classificação , Mamastrovirus/genética , Mamastrovirus/isolamento & purificação , Norovirus/classificação , Norovirus/genética , Norovirus/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Vírus de RNA/genética , Vírus de RNA/patogenicidade , Esgotos , Eliminação de Resíduos Líquidos , Poluição da Água/análise
12.
Gut ; 53(9): 1345-51, 2004 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-15306598

RESUMO

BACKGROUND AND AIMS: There is growing evidence that the response of hepatitis C virus (HCV) genotype 1b infected patients towards interferon (IFN) therapy is influenced by the number of mutations within the carboxy terminal region of the NS5A gene, the interferon sensitivity determining region (ISDR). PATIENTS AND METHODS: In order to attain better insight into this correlation, a file comprising published data on ISDR strains from 1230 HCV genotype 1b infected patients, mainly from Japan and Europe, was constructed and analysed by logistic regression. Sustained virological response (SVR) was defined as negative HCV RNA six months after treatment. RESULTS: The distribution of wild-, intermediate-, and mutant-type ISDR sequences differed significantly between Japanese (n = 655) (44.1%, 37.6%, and 18.3%) and European patients (n = 525) (24.8%, 63.4%, and 11.8%; p<0.001). There was a significant positive correlation between the number of ISDR mutations and SVR rate, irrespective of geographical region. The likelihood of SVR with each additional mutation within the ISDR was considerably more pronounced in Japanese compared with European patients (odds ratios 1.82 v 1.39; p<0.001). Pretreatment viraemia of <6.6 log copies/ml and ISDR mutant-type infection was associated with an SVR rate of 97.1% in Japanese patients but only 52.5% in European patients. Pretreatment viraemia was a stronger predictor of SVR than ISDR mutation number in Japanese patients whereas in European patients both parameters had similar predictive power. CONCLUSION: These data support the concept that mutant-type ISDR strains may represent a subtype within genotype 1b with a more favourable response towards IFN therapy.


Assuntos
Antivirais/uso terapêutico , Hepacivirus/efeitos dos fármacos , Hepatite C Crônica/tratamento farmacológico , Mutação , Proteínas não Estruturais Virais/genética , Farmacorresistência Viral/genética , Europa (Continente)/epidemiologia , Hepacivirus/genética , Hepatite C Crônica/etnologia , Hepatite C Crônica/virologia , Humanos , Interferons/uso terapêutico , Japão/epidemiologia , Filogenia , Carga Viral
13.
Anaesthesist ; 53(7): 633-6, 2004 Jul.
Artigo em Alemão | MEDLINE | ID: mdl-15146283

RESUMO

This is a report about an inadvertent intravenous infusion of 380 mg ropivacaine in a 84-year-old patient over a period of 1.75 h. The level of serum ropivacaine measured immediately after the end of the infusion as well as 2 h and 7 h later, was initially in the lower toxic range (free concentration of 0.48 micro g/ml). The patient showed no symptoms of intoxication neither clinically nor during the technical examinations (EEG, ECG). This case confirms the wide therapeutic range of ropivacaine.


Assuntos
Amidas/efeitos adversos , Anestésicos Locais/efeitos adversos , Erros Médicos , Idoso , Amidas/administração & dosagem , Amidas/sangue , Anestésicos Locais/administração & dosagem , Anestésicos Locais/sangue , Eletrocardiografia/efeitos dos fármacos , Eletroencefalografia/efeitos dos fármacos , Feminino , Humanos , Monitorização Intraoperatória , Implantação de Prótese , Ropivacaina
14.
Z Gastroenterol ; 42(4): 311-6, 2004 Apr.
Artigo em Alemão | MEDLINE | ID: mdl-15095121

RESUMO

INTRODUCTION: During the winter 2002/2003, an increased number of outbreaks of acute gastroenteritis caused by norovirus was reported from Germany, some other European countries and the USA. In this study, the epidemiological and clinical features of the Berlin norovirus outbreak were investigated in order to identify the reasons for the spread of norovirus gastroenteritis and possible control measures. METHODS: Cases and spread of norovirus infection in eleven long-term care facilities and a university hospital in Berlin were monitored from October 2002 to February 2003. To investigate the symptomatology and routes of transmission, a retrospective and interview-based study of infected staff members was performed. RESULTS: Norovirus outbreaks in eleven long-term care facilities affected 314 patients (attack rate: 28.3 %, rate of hospitalisation: 20.7 %). 219 persons were affected in the hospital, during a period of four months. Sequence analysis revealed the circulation of Norovirus genogroup II (Grimsby-like viruses). The mean duration of symptoms was 69 hours. The duration of outbreaks on specific wards was negatively correlated with the time of returning to work (mean: 1.8 days) of the staff members after the disease. DISCUSSION: This report demonstrates the potential of norovirus to cause large outbreaks by person to person transmission. Spread by aerosols generated by vomiting and environmental contamination seem to be particular important in institutional settings. The duration of symptoms was longer than reported previously, reflecting a possible increased virulence. Besides this, the outbreak was facilitated by insufficient preventive measures.


Assuntos
Infecções por Caliciviridae/epidemiologia , Infecção Hospitalar/epidemiologia , Surtos de Doenças/estatística & dados numéricos , Transmissão de Doença Infecciosa/estatística & dados numéricos , Gastroenterite/epidemiologia , Norovirus/patogenicidade , Adulto , Berlim/epidemiologia , Infecções por Caliciviridae/prevenção & controle , Infecção Hospitalar/prevenção & controle , Surtos de Doenças/prevenção & controle , Feminino , Gastroenterite/prevenção & controle , Hospitalização/estatística & dados numéricos , Humanos , Incidência , Tempo de Internação/estatística & dados numéricos , Masculino
15.
J Med Virol ; 72(2): 312-9, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-14695676

RESUMO

Outbreaks of gastroenteritis caused by Norovirus are an increasing public health problem worldwide. The virus is transmitted by contaminated food and by person-to-person. In Germany, a new health reporting system including Norovirus infections has been introduced in 2001. Norovirus outbreaks (73%) diagnosed in our lab occurred in the first half of the year. Phylogenetic analysis shows that 90% belonged to genogroup II (GGII) with the majority related to prototypes Lordsdale/93 and Tarragona/2001. To date, PCR is the most sensitive and specific method for the detection but several procedures are needed to evaluate the amplification product. To minimize the risk of product carryover, a fast and simple procedure with a minimal number of steps are required. A one-tube RT-PCR method is described using the real-time TaqMan-PCR system. Primer sets and probes for both genogroup I (GGI) and genogroup II (GGII) sequences were developed. The specificity and sensitivity of this method was evaluated on 70 Norovirus positive stool samples of 70 outbreaks in Germany and 34 European samples by comparing the detection rate to those of an in-house RT-nested PCR. Overall, 93% of the PCR positive samples have been detected by the TaqMan-PCR including isolates of four different GGI and seven different GGII genotypes. Using plasmid standards for quantitation, virus loads between 10(2) and 10(10) genomic equivalents/ml stool suspension were found. The advantages of the one-step RT/TaqMan-PCR system for detection and quantitation of Norovirus are the high throughput of clinical samples and a decrease of the risk of contamination.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Gastroenterite/epidemiologia , Norovirus/classificação , Norovirus/isolamento & purificação , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Infecções por Caliciviridae/diagnóstico , Infecções por Caliciviridae/virologia , Fezes/virologia , Corantes Fluorescentes , Gastroenterite/diagnóstico , Gastroenterite/virologia , Genótipo , Alemanha/epidemiologia , Norovirus/genética , Filogenia , Sensibilidade e Especificidade , Análise de Sequência de DNA , Taq Polimerase , Carga Viral
16.
Hepatology ; 32(6): 1386-95, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11093746

RESUMO

Both a double-stranded RNA-dependent protein kinase (PKR)-phosphorylation homology domain (PePHD) within the E2 protein and a PKR-binding domain within the nonstructural 5A (NS5A) protein of hepatitis C virus (HCV) genotype 1 isolates inhibit the function of the interferon alfa (IFN-alpha)-induced antiviral effector protein PKR in vitro. We investigated whether the mutational pattern of the E2 region (codons 618-681, including PePHD) of 81 HCV genotype 1-infected patients (HCV-1b [n = 54], HCV-1a [n = 27]) influences the response to IFN-alpha. Initial viral decline (DeltaHCV RNA) was determined at week 1 hereby covering the effector reactions of IFN-alpha-mediated first phase and the immune-mediated second phase. DeltaHCV RNA less than 50% (group 1); DeltaHCV RNA greater than 50% but less than 90% (group 2); and DeltaHCV RNA > or =90% (group 3) were differentiated. The PePHD region was highly conserved; the few mutations (5 patients) did not correlate with DeltaHCV RNA or sustained virologic response to IFN-alpha. Within the flanking regions before and after PePHD (codons 618-681) 72 of 81 patients (89%) had 2.6+/-0.17 mutations (median, 3; range, 1-8) that did not correlate with treatment response. Sequence analysis of the NS5A protein (codons 2,209-2,274, including interferon sensitivity determining region [ISDR]) in 39 of 81 patients showed a higher mean number of mutations in the ISDR (codons 2,209-2,248) in groups 2 (1.28+/- 0.43 [n = 18]) and 3 (1.89+/-0.54 [n = 9]) than in group 1 (0.67+/- 0.19 [n = 12]; P =.049 group 1 vs. 3) and a mutant type ISDR (e.g., > or =4 mutations) was significantly more frequent in sustained virologic responders than in nonresponders or relapsers (2 of 4 [50%] vs. 2 of 35 [6%]; P =.045). Thus, NS5A appears to be functionally relevant in IFN-alpha-induced effector reactions.


Assuntos
Antivirais/uso terapêutico , Hepacivirus/genética , Hepatite C/tratamento farmacológico , Interferon-alfa/uso terapêutico , Mutação/genética , Proteínas do Envelope Viral/genética , Proteínas não Estruturais Virais/genética , Viremia/virologia , Sequência de Aminoácidos/genética , Feminino , Frequência do Gene , Hepacivirus/isolamento & purificação , Hepatite C/virologia , Humanos , Masculino , Pessoa de Meia-Idade , Fragmentos de Peptídeos/genética , Filogenia , Estrutura Secundária de Proteína , Fatores de Tempo , Proteínas não Estruturais Virais/metabolismo , eIF-2 Quinase/metabolismo
17.
J Med Virol ; 62(4): 524-30, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11074483

RESUMO

The seroprevalence and determinants of hepatitis B, C, and E virus infection, and of GBV-C/hepatitis G virus and TT virus infection were investigated among women from a rural area of northeastern Tanzania. High seroprevalence rates were found for TTV (74%), HBV (74%), and GBV-C/HGV (35%), whereas 7% of the women had evidence of HCV and HEV infection. The majority of TTV DNA sequences in the study population belonged to the genotypes 1 or 2. One sequence seems to represent a new subtype of genotype 4. The GBV-C/HGV sequences either belonged to the genomic Group 1b or to the recently described Group 4. In multivariate analysis, the detection of TTV DNA was associated significantly with a larger number of children in the household and with older age. A history of injections of contraceptive hormones was an independent risk factor for HCV infection. The findings on TTV are consistent with fecal-oral transmission, and recurrent infections may occur in adults.


Assuntos
Infecções por Circoviridae/epidemiologia , Flaviviridae/isolamento & purificação , Hepatite B/epidemiologia , Hepatite C/epidemiologia , Hepatite E/epidemiologia , Hepatite Viral Humana/epidemiologia , Adulto , Circoviridae/classificação , Circoviridae/genética , Infecções por Circoviridae/virologia , Feminino , Flaviviridae/classificação , Flaviviridae/genética , Flaviviridae/imunologia , Hepacivirus/imunologia , Hepacivirus/isolamento & purificação , Hepatite B/imunologia , Hepatite B/virologia , Vírus da Hepatite B/imunologia , Vírus da Hepatite B/isolamento & purificação , Hepatite C/imunologia , Hepatite C/virologia , Hepatite E/imunologia , Hepatite E/virologia , Vírus da Hepatite E/imunologia , Vírus da Hepatite E/isolamento & purificação , Hepatite Viral Humana/imunologia , Hepatite Viral Humana/virologia , Humanos , População Rural , Estudos Soroepidemiológicos , Tanzânia/epidemiologia
18.
Planta ; 210(5): 708-14, 2000 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10805441

RESUMO

A particular isoform of lipoxygenase (LOX, EC 1.13.11.12) localized on lipid bodies has been shown by earlier investigations to play a role during seed germination in initiating the mobilization of triacylglycerols. On lipid bodies of germinating cucumber (Cucumis sativus L.) seedlings, the modification of linoleoyl moieties by this LOX precedes the hydrolysis of the ester bonds. We analyzed the expression and intracellular location of this particular LOX form in leaves and seeds of tobacco (Nicotiana tabacum L.) transformed with one construct coding for cucumber lipid-body LOX and one construct coding for cucumber LOX fused with a hemagglutinin epitope. In both tissues, the amount of lipid-body LOX was clearly detectable. Biochemical analysis revealed that in mature seeds the foreign LOX was targeted to lipid bodies, and the preferred location of the LOX on lipid bodies was verified by immunofluorescence microscopy. Cells of the endosperm and of the embryo exhibited fluorescence based on the immunodecoration of LOX protein whereas very weak fluorescent label was visible in seeds of untransformed control plants. Further cytochemical analysis of transformed plants showed that the LOX protein accumulated in the cytoplasm when green leaves lacking lipid bodies were analyzed. Increased LOX activity was shown in young leaves of transformed plants by an increase in the amounts of endogenous (2E)-hexenal and jasmonic acid.


Assuntos
Cucumis sativus/enzimologia , Lipoxigenase/metabolismo , Nicotiana/enzimologia , Plantas Tóxicas , Aldeídos/metabolismo , Western Blotting , Cromatografia Líquida de Alta Pressão , Cucumis sativus/genética , Cucumis sativus/crescimento & desenvolvimento , Ciclopentanos/metabolismo , Grânulos Citoplasmáticos/enzimologia , Cromatografia Gasosa-Espectrometria de Massas , Imuno-Histoquímica , Ácidos Linoleicos/metabolismo , Lipídeos , Lipoxigenase/genética , Oxilipinas , Folhas de Planta/química , Folhas de Planta/enzimologia , Plantas Geneticamente Modificadas , Sementes/enzimologia , Nicotiana/genética
19.
Eur J Biochem ; 267(4): 1100-9, 2000 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-10672019

RESUMO

Phospholipase A2 and a particular isoform of lipoxygenase are synthesized and transferred to lipid bodies during the stage of triacylglycerol mobilization in germinating cucumber seedlings. Lipid body lipoxygenase (LBLOX) is post-translationally transported to lipid bodies without proteolytic modification. Fractionation of homogenates from cucumber cotyledons or transgenic tobacco leaves expressing LBLOX showed that a small but significant amount was detectable in the microsomal fraction. A beta-barrel-forming N-terminal domain in the structure of LBLOX, as deduced from sequence data, was shown to be crucial for selective intracellular transport from the cytosol to lipid bodies. Although a specific signal sequence for targeting protein domains to the lipid bodies could not be established, it was evident that the beta-barrel represents a membrane-binding domain that is functionally comparable with the C2 domains of mammalian phospholipases. The intact beta-barrel of LBLOX was demonstrated to be sufficient to target in vitro a fusion protein of LBLOX beta-barrel with glutathione S-transferase (GST) to lipid bodies. In addition, binding experiments on liposomes using lipoxygenase isoforms, LBLOX deletions and the GST-fusion protein confirmed the role of the beta-barrel as the membrane-targeting domain. In this respect, the cucumber LBLOX differs from cytosolic isoforms in cucumber and from the soybean LOX-1. When the beta-barrel of LBLOX was destroyed by insertion of an additional peptide sequence, its ability to target proteins to membranes was abolished.


Assuntos
Lipossomos/metabolismo , Lipoxigenase/química , Lipoxigenase/metabolismo , Estruturas Vegetais/enzimologia , Estruturas Vegetais/metabolismo , Sinais Direcionadores de Proteínas/fisiologia , Sítios de Ligação , Transporte Biológico , Cucumis sativus/citologia , Cucumis sativus/enzimologia , Citosol/enzimologia , Citosol/metabolismo , Retículo Endoplasmático/enzimologia , Retículo Endoplasmático/metabolismo , Membranas Intracelulares/enzimologia , Membranas Intracelulares/metabolismo , Isoenzimas/química , Isoenzimas/genética , Isoenzimas/metabolismo , Lipoxigenase/genética , Microssomos/enzimologia , Microssomos/metabolismo , Mutação/genética , Fosfolipases A/metabolismo , Fosfolipases A2 , Estruturas Vegetais/citologia , Plantas Geneticamente Modificadas , Plantas Tóxicas , Ligação Proteica , Biossíntese de Proteínas/fisiologia , Sinais Direcionadores de Proteínas/química , Sinais Direcionadores de Proteínas/genética , Estrutura Terciária de Proteína , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Nicotiana/citologia , Nicotiana/enzimologia , Nicotiana/genética
20.
Cancer Lett ; 145(1-2): 9-15, 1999 Oct 18.
Artigo em Inglês | MEDLINE | ID: mdl-10530764

RESUMO

To investigate the role of the deleted in colorectal carcinoma gene (DCC) in cells of pancreatic origin (MiaPaCa-2) we established cell lines stably expressing DCC antisense RNA. Expression of DCC antisense RNA led to striking alterations in the MiaPaCa-2 cell line. Antisense transfectants had nearly lost adherence and had acquired a spherical morphology. The ordered structure of actin bundles in the parental cell line had been lost largely in DCC antisense RNA expressing cell clones. Moreover, the antisense DCC transfected cells displayed a decreased growth rate, a decrease of cells in G1 phase and an accumulation in S phase of the cell cycle. These heavily altered characteristics of MiaPaCa-2 cells expressing DCC antisense RNA point to a yet unknown role for DCC in an important intracellular pathway.


Assuntos
Carcinoma Ductal de Mama/genética , Neoplasias Colorretais/genética , Deleção de Genes , Neoplasias Pancreáticas/genética , RNA Antissenso/farmacologia , Ciclo Celular/fisiologia , Diferenciação Celular , Divisão Celular/fisiologia , Citoesqueleto/ultraestrutura , Humanos
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