Quantitative analysis of essential oils of Thymus daenensis using laser-induced fluorescence and Raman spectroscopy.

Laser-induced fluorescence and Raman spectroscopy are used for the investigation of different genotypes of Thymus daenensis native to the Ilam province of Iran. Different genotypes of T. daenensis essential oils, labeled T1 through T7, possess slight differences with regard to the composition of the thymol. The gas chromatography-mass spectrometry (GC-MS) method is performed to determine the concentration of each constituent as a reference method. The Raman spectra of different concentrations of pure thymol dissolved in hexane as standard samples are obtained via a laboratory prototype Raman spectroscopy setup for the calculation of the calibration curve. The regression coefficient and limit of detection are calculated. The possibility of the differentiation of different genotypes of T. daenensis is also examined by laser-induced fluorescence spectroscopy, although we do not know the exact amounts of their components. All the fluorescence spectral information is used jointly by cluster analysis to differentiate between 7 genotypes. Our results demonstrate the acceptable precision of Raman spectroscopy with GC-MS and corroborate the capacity of Raman spectroscopy in applications in the quantitative analysis field. Furthermore, the cluster analysis results show that laser-induced fluorescence spectroscopy is an acceptable technique for the rapid classification of different genotypes of T. daenensis without having any previous information of their exact amount of constituents. So, the ability to rapidly and nondestructively differentiate between genotypes makes it possible to efficiently select high-quality herbs from many samples.

Relationships among fourteen species of Satureja growing wild in Iran detected with molecular markers.

The genus Satureja is an important plant with a number of aromatic and medicinal properties. In this research, the relative efficiencies of amplified fragment length polymorphism (AFLP) and selectively amplified microsatellite polymorphic loci (SAMPL) were used to detect genetic relationships among 14 species of Satureja, growing wild in Iran. Eleven AFLP and 14 SAMPL primer combinations produced 999 and 1142 scorable bands, respectively, all of the fragments of which were found to be polymorphic. The average genetic similarity values based on Jaccard's coefficient were 0.24 and 0.21 for AFLP and SAMPL, respectively, indicating considerable distance and diversity in the studied germplasm. The correlation coefficients were statistically significant between both marker systems (r = 0.89). UPGMA derived from the combined binary data matrices of both markers depicted genetic distinctions among the studied species and clustered them into two main clusters and several groups. S. edmondi showed the maximum distance from other species and was placed into a single main cluster, while the maximum similarity was obtained between S. rechingeri and S. khuzistanica. Our results indicate that both marker systems are suitable for differentiating individuals and species of this genus.

Chemical composition and in vitro antimicrobial activity of the essential oil of Cyclotrichium leucotrichum from Iran.

The objective of this study was to investigate in vitro antimicrobial activity and composition of the essential oil of Cyclotrichium leucotrichum growing wild in Iran. The essential oil was obtained by hydro-distillation and analysed by GC-FID and GC/MS. Fifty-nine components representing 98.9% of the total oil were characterised. The essential oil which has 1,8-cineol (14.8%), elemol (12.6%), spathulenol (9.4%), E-caryophyllene (5.7%) and hinesol (5.7%) as its main components, exhibited moderate activity against seven bacteria and a yeast, Candida albicans, with minimum inhibitory concentration values ranging from 0.5 to 64 mg mL(-1) and minimum bactericidal concentration values ranging from 2 to >64 mg mL(-1), respectively. The best inhibitory effects were against three gram-positive bacteria and tested yeast, C. albicans.

Essential oil composition and antibacterial activity of Thymus caramanicus at different phenological stages.

Thymus species are well known as medicinal plants because of their biological and pharmacological properties. Thymus caramanicus is an endemic species grown in Iran. Variation in the quantity and quality of the essential oil of wild population of T. caramanicus at different phenological stages including vegetative, floral budding, flowering and seed set are reported. The oils of air-dried samples were obtained by hydrodistillation. The yields of oils (w/w%) at different stages were in the order of: flowering (2.5%), floral budding (2.1%), seed set (2.0%) and vegetative (1.9%). The oils were analyzed by GC and GC-MS. In total 37, 37, 29 and 35 components were identified and quantified in vegetative, floral budding, full flowering and seed set, representing 99.3, 98.6, 99.2 and 97.8% of the oil, respectively. Carvacrol was the major compound in all samples. The ranges of major constituents were as follow: carvacrol (58.9-68.9%), p-cymene (3.0-8.9%), γ-terpinene (4.3-8.0%), thymol (2.4-6.0%) and borneol (2.3-4.0%). Antibacterial activity of the oils and their main compounds were tested against seven Gram-positive and Gram-negative bacteria by disc diffusion method and determining their minimum inhibitory concentration (MIC) values. The inhibition zones (IZ) and MIC values for bacterial strains, which were sensitive to the essential oil of T. caramanicus, were in the range of 15-36mm and 0.5-15.0mg/ml, respectively. The oils of various phenological stages showed high activity against all tested bacteria, of which Bacillus subtilis and Pseudomonas aeruginosa were the most sensitive and resistant strains, respectively. Thus, they represent an inexpensive source of natural antibacterial substances that exhibited potential for use in pathogenic systems.

Chemical composition and antifungal activity of the essential oils of three species of Artemisia on some soil-borne phytopathogens.

Various species of the genus Artemisia are used for their pharmacological, antimicrobial, antioxidant activity. Three species of this genus, Artemisia scoparia, A. sieberi and A. aucheri are widely distributed in desert area of Iran. In order to identify the chemical composition, aerial parts of A. scoparia, A. sieberi and A. aucheri were collected from Bajestan (Khorasan province) at flowering stage. The essential oils were obtained by hydro-distillation of air-dried samples and their chemical composition identified by GC-MS. Oxygenated monoterpens were the major components of the oils of three species. alpha-thujone (81.7%), beta-thujone (14.5%) and 1,8-cineol (1.9%) were the major compounds in the essential oil of A. scoparia. The essential oil of A. aucheri was rich in linalool (44.1%), gernyl acetate (10.7%), (E)-citral (9.7%) and (Z)-citral (7.7%), and the essential oil of A. sieberi was rich in beta-thujone (19.8%), alpha-thujone (10.5%), camphor (19.5%), verbenol (9.7%), p-mentha-1,5-dien-8-ol (6.4) and davanone (5.8%). The essential oils of the three species were tested for their antifungal activity against some soil-borne pathogenic fungi. Results of bioassay showed that the oils of A. aucheri and A. sieberi has stronger antifungal activity. Minimum EC50 (41.406 microL/L), resulted from A. aucheri on Rhizoctonia solani. The oil of A. sieberi showed fungistatic activity against, Tiarosporella phaseolina (MIC = 1000 microL/L, EC50 = 203.419 microL/L), Fusarium moniliforme (MIC=750 microL/L, EC50 = 211.072 microL/L), Fusarium solani (MIC = 750 microL/L, EC50 = 188.134 microL/L) whereas against R. solani (MIC = 250 microL/L, EC50 = 121.798 microL/L) exhibited high fungicidal activity.