Deploying Machine Learning Based Segmentation for Scientific Imaging Analysis at Synchrotron Facilities.

Scientific user facilities present a unique set of challenges for image processing due to the large volume of data generated from experiments and simulations. Furthermore, developing and implementing algorithms for real-time processing and analysis while correcting for any artifacts or distortions in images remains a complex task, given the computational requirements of the processing algorithms. In a collaborative effort across multiple Department of Energy national laboratories, the "MLExchange" project is focused on addressing these challenges. MLExchange is a Machine Learning framework deploying interactive web interfaces to enhance and accelerate data analysis. The platform allows users to easily upload, visualize, label, and train networks. The resulting models can be deployed on real data while both results and models could be shared with the scientists. The MLExchange web-based application for image segmentation allows for training, testing, and evaluating multiple machine learning models on hand-labeled tomography data. This environment provides users with an intuitive interface for segmenting images using a variety of machine learning algorithms and deep-learning neural networks. Additionally, these tools have the potential to overcome limitations in traditional image segmentation techniques, particularly for complex and low-contrast images.

Intermolecular interaction and cooperativity in an Fe(II) spin crossover molecular thin film system.

Compact domain features have been observed in spin crossover [Fe{H2B(pz)2}2(bipy)] molecular thin film systems via soft x-ray absorption spectroscopy and photoemission electron microscopy. The domains are in a mixed spin state that on average corresponds to roughly 2/3 the high spin occupation of the pure high spin state. Monte Carlo simulations support the presence of intermolecular interactions that can be described in terms of an Ising model in which interactions beyond nearest-neighbors cannot be neglected. This suggests the presence of short-range order to permit interactions between molecules beyond nearest neighbor that contribute to the formation of largely high spin state domains structure. The formation of a spin state domain structure appears to be the result of extensive cooperative effects.

Evidence for surface effects on the intermolecular interactions in Fe(II) spin crossover coordination polymers.

From X-ray absorption spectroscopy (XAS) and X-ray photoemission spectroscopy (XPS), it is evident that the spin state transition behavior of Fe(II) spin crossover coordination polymer crystallites at the surface differs from the bulk. A comparison of four different coordination polymers reveals that the observed surface properties may differ from bulk for a variety of reasons. There are Fe(II) spin crossover coordination polymers with either almost complete switching of the spin state at the surface or no switching at all. Oxidation, differences in surface packing, and changes in coordination could all contribute to making the surface very different from the bulk. Some Fe(II) spin crossover coordination polymers may be sufficiently photoactive so that X-ray spectroscopies cannot discern the spin state transition.

MLExchange: A web-based platform enabling exchangeable machine learning workflows for scientific studies.

Machine learning (ML) algorithms are showing a growing trend in helping the scientific communities across different disciplines and institutions to address large and diverse data problems. However, many available ML tools are programmatically demanding and computationally costly. The MLExchange project aims to build a collaborative platform equipped with enabling tools that allow scientists and facility users who do not have a profound ML background to use ML and computational resources in scientific discovery. At the high level, we are targeting a full user experience where managing and exchanging ML algorithms, workflows, and data are readily available through web applications. Since each component is an independent container, the whole platform or its individual service(s) can be easily deployed at servers of different scales, ranging from a personal device (laptop, smart phone, etc.) to high performance clusters (HPC) accessed (simultaneously) by many users. Thus, MLExchange renders flexible using scenarios-users could either access the services and resources from a remote server or run the whole platform or its individual service(s) within their local network.

Quantitative Study of the Energy Changes in Voltage-Controlled Spin Crossover Molecular Thin Films.

Voltage-controlled nonvolatile isothermal spin state switching of a [Fe{H2B(pz)2}2(bipy)] (pz = tris(pyrazol-1-1y)-borohydride, bipy = 2,2'-bipyridine) film, more than 40 to 50 molecular layers thick, is possible when it is adsorbed onto a molecular ferroelectric substrate. Accompanying this high-spin and low-spin state switching, at room temperature, we observe a remarkable change in conductance, thereby allowing not only nonvolatile voltage control of the spin state ("write") but also current sensing of the molecular spin state ("read"). Monte Carlo Ising model simulations of the high-spin state occupancy, extracted from X-ray absorption spectroscopy, indicate that the energy difference between the low-spin and high-spin state is modified by 110 meV. Transport measurements demonstrate that four terminal voltage-controlled devices can be realized using this system.

The emergence of the local moment molecular spin transistor.

Local moment molecular systems have now been used as the conduction channel in gated spintronics devices, and some of these three terminal devices might even be considered molecular spin transistors. In these systems, the gate voltage can be used to tune the molecular level alignment, while applied magnetic fields have an influence on the spin state, altering the magnetic properties, and providing insights to the magnetic anisotropy. More recently, the use of molecular spin crossover complexes, as the conduction channel, has led to devices that are both nonvolatile and have functionality at higher temperatures. Indeed, some devices have now been demonstrated to work at room temperature. Here, several molecular transistors, including those claiming to use single molecule magnets (SMM), are reviewed.

Manipulation of the molecular spin crossover transition of Fe(H2B(pz)2)2(bipy) by addition of polar molecules.

The addition of various dipolar molecules is shown to affect the temperature dependence of the spin state occupancy of the much studied spin crossover Fe(II) complex, [Fe{H2B(pz)2}2(bipy)] (pz = pyrazol-1-yl, bipy = 2,2'-bipyridine). Specifically, the addition of benzimidazole results in a re-entrant spin crossover transition, i.e. the spin state starts in the mostly low spin state, then high spin state occupancy increases, and finally the high spin state occupancy decreases with increasing temperature. This behavior contrasts with that observed when the highly polar p -benzoquinonemonoimine zwitterion C6H2(…NH2)2(…O)2 was mixed with [Fe{H2B(pz)2}2(bipy)], which resulted in locking [Fe{H2B(pz)2}2(bipy)] largely into a low spin state while addition of the ethyl derivative C6H2(…NHC2H5)2(…O)2 did not appear to perturb the spin crossover transition of [Fe{H2B(pz)2}2(bipy)].

Tunable spin-state bistability in a spin crossover molecular complex.

The spin crossover (SCO) transitions at both the surface and over the entire volume of the [Fe{H2B(pz)2}2(bipy)] polycrystalline films on Al2O3 substrates have been studied, where pz = pyrazol-1-yl and bipy = 2,2'-bipyridine. For [Fe{H2B(pz)2}2(bipy)] films of hundreds of nm thick, magnetometry and x-ray absorption spectroscopy measurements show thermal hysteresis in the SCO transition with temperature, although the transition in bulk [Fe{H2B(pz)2}2(bipy)] occurs in a non-hysteretic fashion at 157 K. While the size of the crystallites in those films are similar, the hysteresis becomes more prominent in thinner films, indicating a significant effect of the [Fe{H2B(pz)2}2(bipy)]/Al2O3 interface. Bistability of spin states, which can be inferred from the thermal hysteresis, was directly observed using temperature-dependent x-ray diffraction; the crystallites behave as spin-state domains that coexist during the transition. The difference between the spin state of molecules at the surface of the [Fe{H2B(pz)2}2(bipy)] films and that of the molecules within the films, during the thermal cycle, indicates that both cooperative (intermolecular) effects and coordination are implicated in perturbations to the SCO transition.

Inkjet Printing All Inorganic Halide Perovskite Inks for Photovoltaic Applications.

A method for synthesizing photoactive inorganic perovskite quantum dot inks and an inkjet printer deposition method, using the synthesized inks, are demonstrated. The ink synthesis is based on a simple wet chemical reaction and the inkjet printing protocol is a facile step by step method. The inkjet printed thin films have been characterized by X-ray diffraction, optical absorption spectroscopy, photoluminescent spectroscopy, and electronic transport measurements. X-ray diffraction of the printed quantum dot films indicates a crystal structure consistent with an orthorhombic room temperature phase with (001) orientation. In conjunction with other characterization methods, the X-ray diffraction measurements show high quality films can be obtained through the inkjet printing method.

Perturbing the spin crossover transition activation energies in Fe(H2B(pz)2)2(bipy) with zwitterionic additions.

A thermal component to the soft x-ray induced spin crossover transition exists in the switching of a spin crossover compound (complex [Fe{H2B(pz)2}2(bipy)] (pz = pyrazol-1-yl, bipy = 2,2'-bipyridine) combined with the dipolar molecular additives (zwitterionic p-benzoquinonemonoimine C6H2([Formula: see text])2([Formula: see text])2). The addition of the zwitterionic molecule locks the Fe(II) complex in a largely low spin state configuration over an unusually broad temperature range that includes temperatures well above the thermal spin crossover temperature of 160 K. It is demonstrated here that the process of exciting the [Fe{H2B(pz)2}2(bipy)] moiety, in the presence of with C6H2([Formula: see text])2([Formula: see text])2, to an electronic state characteristic of the high spin state though incident x-ray fluences, has a thermal activation energies are determined to 14-18 meV for a range of mixing ratios from 1:2 to 1:10. Those activation energies are also significantly reduced as compared to values of 60-80 meV found for nanometer thin films of [Fe{H2B(pz)2}2(bipy)] on SiO2.

Degenerate seaweed to tilted dendrite transition and their growth dynamics in directional solidification of non-axially oriented crystals: a phase-field study.

We report the results of a phase-field study of degenerate seaweed to tilted dendrite transition and their growth dynamics during directional solidification of a binary alloy. Morphological selection maps in the planes of (G, Vp) and (ε4, Vp) show that lower pulling velocity, weaker anisotropic strength and higher thermal gradient can enhance the formation of the degenerate seaweed. The tip undercooling shows oscillations in seaweed growth, but it keeps at a constant value in dendritic growth. The M-S instability on the tips and the surface tension anisotropy of the solid-liquid interface are responsible for the formation of the degenerate seaweed. It is evidenced that the place where the interfacial instability occurs determines the morphological transition. The transient transition from degenerate seaweed to tilted dendrite shows that dendrites are dynamically preferred over seaweed. For the tilted dendritic arrays with a large tilted angle, primary spacing is investigated by comparing predicted results with the classical scaling power law, and the growth direction is found to be less sensitive to the pulling velocity and the primary spacing. Furthermore, the effect of the initial interface wavelength on the morphological transition is investigated to perform the history dependence of morphological selection.