Molecular phylogenetics and evolution of the endemic Hawaiian genus Adenophorus (Grammitidaceae).

Recent studies of the phylogeny of several groups of native Hawaiian vascular plants have led to significant insights into the origin and evolution of important elements of the Hawaiian flora. No groups of Hawaiian pteridophytes have been subjected previously to rigorous phylogenetic analysis. We conducted a molecular phylogenetic analysis of the endemic Hawaiian fern genus Adenophorus employing DNA sequence variation from three cpDNA fragments: rbcL, atpbeta, and the trnL-trnF intergenic spacer (IGS). In the phylogenetic analyses we employed maximum parsimony and Bayesian inference. Bayesian phylogenetic inference often provided stronger support for hypothetical relationships than did nonparametric bootstrap analyses. Although phylogenetic analyses of individual DNA fragments resulted in different patterns of relationships among species and varying levels of support for various clades, a combined analysis of all three sets of sequences produced one, strongly supported phylogenetic hypothesis. The primary features of that hypothesis are: (1) Adenophorus is monophyletic; (2) subgenus Oligadenus is paraphyletic; (3) the enigmatic endemic Hawaiian species Grammitis tenella is strongly supported as the sister taxon to Adenophorus; (4) highly divided leaf blades are evolutionarily derived in the group and simple leaves are ancestral; and, (5) the biogeographical origin of the common ancestor of the Adenophorus-G. tenella clade remains unresolved, although a neotropical origin seems most likely.

Isozyme variability among cryptic species of Botrychium subgenus Botrychium (Ophioglossaceae).

The systematics of Botrychium subgenus Botrychium has been controversial, primarily because reduction in frond size and complexity has limited the number of characters available for discrimination of species. The recognition of many polyploid species has magnified the difficulty of classification because allopolyploids are often morphologically intermediate between their progenitor diploids. In order to evaluate species limits and sectional boundaries, we surveyed and compared 16 of the 24 currently recognized species for isozymic variation. Little or no intrapopulational variation was detected, but the variation present was consistent with the hypothesis that Botrychium species are primarily inbreeding. Interspecific comparisons distinguished six diploid species and provided evidence of molecular differentiation between the cryptic sister species B. lunaria and B. crenulatum. Evidence of possible progenitor/descendant relationships was found for certain diploid/polyploid relationships. Using enzyme bands shared between species, realignment of the sectional assignment of several species is proposed. Anomalous banding patterns in certain individuals suggested that gene silencing or homoeologous chromosome pairing might be operating in B. minganense, B. hesperium, and B. matricariifolium. Isozyme data also showed that some populations of species presumed to be uniformly diploid possessed isozyme patterns typical of polyploids. All available molecular data indicate that members of Botrychium subgenus Botrychium are actively evolving at diploid and polyploid levels.

Electrophoretic Evidence for Genetic Diploidy in the Bracken Fern (Pteridium aquilinum).

Analysis of isozyme variability demonstrates that bracken fern (Pteridium aquilinum) has a diploid genetic system and expresses solely disomic inheritance patterns. Electrophoretic data indicate that genetically variable progeny are produced in natural populations after intergametophytic mating rather than by a process involving recombination between duplicated unlinked loci. Although some enzymes are encoded by more than one locus, this has resulted from subcellular compartmentalization of isozymes, and there is no evidence of extensive gene duplication resulting from polyploidy. The conclusions reached in this report differ from those which propose polyploidy as an adaptive mechanism for maintaining genetic variability in Pteridium and other homosporous pteridophytes.

Genetic evidence suggests that homosporous ferns with high chromosome numbers are diploid.

Homosporous ferns have usually been considered highly polyploid because they have high chromosome numbers (average n = 57.05). In angiosperms, species with chromosome numbers higher than n = 14 generally have more isozymes than those with lower numbers, consistent with their polyploidy. By extrapolation, homosporous ferns would be expected to have many isozymes. However, ongoing surveys indicate that within fern genera, species having the lowest chromosome numbers have the number of isozymes considered typical of diploid seed plants. Only species above these lowest numbers have additional isozymes. Therefore, homosporous ferns either have gone through repeated cycles of polyploidy and gene silencing or were initiated with relatively high chromosome numbers. The latter possibility represents a radical departure from currently advocated hypotheses of fern evolution and suggests that there may be fundamental differences between the genomes of homosporous ferns and those of higher plants. These hypotheses can be tested by genetic, karyological, and molecular techniques.