The Application of a Nanomaterial Optical Fiber Biosensor Assay for Identification of Brucella Nomenspecies.

Bacteria in the genus Brucella are the cause of brucellosis in humans and many domestic and wild animals. A rapid and culture-free detection assay to detect Brucella in clinical samples would be highly valuable. Nanomaterial optical fiber biosensors (NOFS) are capable of recognizing DNA hybridization events or other analyte interactions with high specificity and sensitivity. Therefore, a NOFS assay was developed to detect Brucella DNA from cultures and in tissue samples from infected mice. An ionic self-assembled multilayer (ISAM) film was coupled to a long-period grating optical fiber, and a nucleotide probe complementary to the Brucella IS711 region and modified with biotin was bound to the ISAM by covalent conjugation. When the ISAM/probe duplex was exposed to lysate containing ≥100 killed cells of Brucella, or liver or spleen tissue extracts from Brucella-infected mice, substantial attenuation of light transmission occurred, whereas exposure of the complexed fiber to non-Brucella gram-negative bacteria or control tissue samples resulted in negligible attenuation of light transmission. Oligonucleotide probes specific for B. abortus, B. melitensis, and B. suis could also be used to detect and differentiate these three nomenspecies. In summary, the NOFS biosensor assay detected three nomenspecies of Brucella without the use of polymerase chain reaction within 30 min and could specifically detect low numbers of this bacterium in clinical samples.

Identification of Histophilus somni by a nanomaterial optical fiber biosensor assay.

Histophilus somni is an opportunistic pathogen responsible for respiratory and systemic diseases of cattle and sheep. Rapid and accurate detection of H. somni is essential to distinguish H. somni from other potential pathogens for proper control and treatment of infections. Nanomaterial optical fiber biosensors (NOFS) recognize analyte interactions, such as DNA hybridization, with high specificity and sensitivity, and were applied to detect H. somni DNA in culture and clinical samples. An ionic self-assembled multilayer (ISAM) film was fabricated on a long-period grating optical fiber, and a biotinylated, nucleotide probe complementary to the H. somni 16S rDNA gene was coupled to the ISAM film. Exposure of the ISAM::probe to ⩾100 killed cells of H. somni strain 2336 without DNA amplification resulted in attenuation of light transmission of ⩾9.4%. Exposure of the complexed fiber to Escherichia coli or non- H. somni species of Pasteurellaceae reduced light transmission by ⩽3.4%. Exposure of the ISAM::probe to blood, bronchoalveolar fluid, or spleen from mice or calves infected with H. somni resulted in ⩾24.3% transmission attenuation. The assay correctly detected all 6 strains of H. somni tested from culture, or tissues from 3 separate mice and calves tested in duplicate. Six heterologous strains (representing 6 genera) reacted at below the cutoff value of 4.87% attenuation of light transmission. NOFS detected at least 100 H. somni cells without DNA amplification within 45 min with high specificity. Although different fibers could vary in signal sensitivity, this did not affect the sensitivity or specificity of the assay.

Self-assembled PCBM bilayers on graphene and HOPG examined by AFM and STM.

In this work we report fabrication and characterization of phenyl-C61-butyric acid methyl ester (PCBM) bilayer structures on graphene and highly oriented pyrolytic graphite (HOPG). Through careful control of the PCBM solution concentration (from 0.1 to 2 mg ml-1) and the deposition conditions, we demonstrate that PCBM molecules self-assemble into bilayer structures on graphene and HOPG substrates. Interestingly, the PCBM bilayers are formed with two distinct heights on HOPG, but only one unique representative height on graphene. At elevated annealing temperatures, edge diffusion allows neighboring vacancies to merge into a more ordered structure. This is, to the best of our knowledge, the first experimental realization of PCBM bilayer structures on graphene. This work could provide valuable insight into fabrication of new hybrid, ordered structures for applications to organic solar cells.

Fabrication and characterization of periodically patterned silica fiber structures for enhanced second-order nonlinearity: publisher's note.

This publisher's note amends the author list of [Opt. Express23, 8113 (2015)].

Imidazolium-Containing ABA Triblock Copolymers as Electroactive Devices.

Two-step reversible addition-fragmentation chain transfer (RAFT) polymerization and two subsequent postpolymerization modification steps afforded well-defined ABA triblock copolymers featuring mechanically reinforcing polystyrene outer blocks and 1-methylimidazole-neutralized poly(acrylic acid)-based central blocks. Size exclusion chromatography and (1)H NMR spectroscopy confirmed predictable molecular weights and narrow distributions. The ionic liquid (IL) 1-ethyl-3-methylimidazolium trifluoromethanesulfonate ([EMIm][OTf]) was incorporated at 30 wt % into polymeric films. Thermogravimetric analysis, differential scanning calorimetry, and dynamic mechanical analysis determined the thermomechanical properties of the polymers and polymer-IL composites. Atomic force microscopy, small-angle X-ray scattering (SAXS), and transmission electron microscopy (TEM) determined surface and bulk morphologies, and poly(Sty-b-AA(MeIm)-b-Sty) exhibited a change from packed cylindrical to lamellar morphology in SAXS upon IL incorporation. Electrochemical impedance spectroscopy determined the in-plane ionic conductivities of the polymer-IL membranes (σ ∼ 10(-4) S/cm). A device fabricated from poly(Sty-b-AA(MeIm)-b-Sty) with 30 wt % incorporated IL demonstrated mechanical actuation under a low applied voltage of 4 V.

Temperature Evolution of Quasi-one-dimensional C60 Nanostructures on Rippled Graphene.

We report the preparation of novel quasi-one-dimensional (quasi-1D) C60 nanostructures on rippled graphene. Through careful control of the subtle balance between the linear periodic potential of rippled graphene and the C60 surface mobility, we demonstrate that C60 molecules can be arranged into a quasi-1D C60 chain structure with widths of two to three molecules. At a higher annealing temperature, the quasi-1D chain structure transitions to a more compact hexagonal close packed quasi-1D stripe structure. This first experimental realization of quasi-1D C60 structures on graphene may pave a way for fabricating new C60/graphene hybrid structures for future applications in electronics, spintronics and quantum information.

Detection of methicillin-resistant staphylococci by biosensor assay consisting of nanoscale films on optical fiber long-period gratings.

Methicillin-resistance among Staphylococcus species is a major health problem in hospitals, communities, and animals. There is a need for culture-free diagnostic assays that can be carried out rapidly, and maintain a high degree of sensitivity and specificity. To address this need an ionic self-assembled multilayer (ISAM) film was deposited on the surface of a long-period grating (LPG) optical fiber by immersion alternately in poly-allylamine hydrochloride and in poly-1-[p-(3'-carboxy-4'-hydroxyphenylazo) benzenesulfonamido]-1,2-ethandiyl (PCBS), resulting in terminal carboxyl groups on the LPG-ISAM. The terminal carboxyl groups were covalently conjugated to monoclonal antibodies (MAb) specific to penicillin-binding-protein 2a of methicillin resistant (MR) staphylococci. After exposure of the LPG-ISAM to 10(2) colony forming units (CFU)/ml of MR S. aureus (MRSA) for 50 min., light transmission was reduced by 19.7%. In contrast, after exposure to 10(6) CFU/ml of methicillin-sensitive S. aureus (MSSA) attenuation of light transmission was less than 1.8%. Exposure of the LPG-ISAM to extracts of liver, lungs, or spleen from mice infected with MRSA attenuated light transmission by 11.7-73.5%. In contrast, exposure of the biosensor to extracts from MSSA-infected mice resulted in 5.6% or less attenuation of light transmission. When the sensor was tested with 36 strains of MR staphylococci, 15 strains of methicillin-sensitive staphylococci, 10 strains of heterologous genera (all at 10(4) CFU/ml), or tissue samples from mice infected with MRSA, there was complete agreement between MR and non-MR bacteria determined by antibiotic susceptibility testing and the biosensor assay when the cutoff value for attenuation of light transmission was 6.3%. Thus, the biosensor described has the potential to detect MR staphylococci in clinical samples with a high degree of sensitivity and specificity.

Fabrication and characterization of periodically patterned silica fiber structures for enhanced second-order nonlinearity.

We develop and characterize a UV ablation technique that can be used to pattern soft materials such as polymers and nonlinear molecules self-assembled over silica microstructures. Using this method, we fabricate a spatially periodic coating of nonlinear film over a thin silica fiber taper for second harmonic generation (SHG). Experimentally, we find that the second harmonic signal produced by the taper with periodic nonlinear coating is 15 times stronger than the same taper with uniform nonlinear coating, which suggests that quasi-phase-matching is at least partially achieved in the patterned nonlinear silica taper. The same technique can also be used to spatially pattern other types of functional nanomaterials over silica microstructures with curved surfaces, as demonstrated by deposition of gold nanoparticles in patterned structures.

Fluorescence lifetime based characterization of active and tunable plasmonic nanostructures.

We report a non-contact method that utilizes fluorescence lifetime (FL) to characterize morphological changes of a tunable plasmonic nanostructure with nanoscale accuracy. The key component of the plasmonic nanostructure is pH-responsive polyelectrolyte multilayers (PEMs), which serve as a dynamically tunable "spacer" layer that separates the plasmonic structure and the fluorescent materials. The validity of our method is confirmed through direct comparison with ellipsometry and atomic force microscopy (AFM) measurements. Applying the FL-based approach, we find that a monolayer polycation film responds to pH changes with significantly less hysteresis than a thicker multilayer film with polyelectrolytes of both charges. Additionally, we characterize an active and tunable plasmonic nanostructure composed of self-assembled fluorescent dye (Texas Red), pH-sensitive PEMs, and gold nanospheres adsorbed on the PEM surface. Our results point towards the possibility of using stimulus-sensitive polymers to construct active and tunable plasmonic nanodevices.

Impact of lithography on the fluorescence dynamics of self-assembled fluorophores.

Micro- and nano-patterned fluorescent materials are important for many photonic devices and applications. In this paper, we investigate the impact of three common lithographical techniques, deposition and removal of sacrificial masks, ultraviolet ablation, and focused ion beam milling, on self-assembled fluorophores. We find that different patterning techniques can dramatically change the fluorescence lifetime of the fluorophores and that the degree of modification depends on the patterning techniques.

A comparative study of nano-scale coatings on gold electrodes for bioimpedance studies of breast cancer cells.

The relative sensitivity of standard gold microelectrodes for electric cell-substrate impedance sensing was compared with that of gold microelectrodes coated with gold nanoparticles, carbon nanotubes, or electroplated gold to introduce nano-scale roughness on the surface of the electrodes. For biological solutions, the electroplated gold coated electrodes had significantly higher sensitivity to changes in conductivity than electrodes with other coatings. In contrast, the carbon nanotube coated electrodes displayed the highest sensitivity to MDA-MB-231 metastatic breast cancer cells. There was also a significant shift in the peak frequency of the cancer cell bioimpedance signal based on the type of electrode coating. The results indicate that nano-scale coatings which introduce varying degrees of surface roughness can be used to modulate the frequency dependent sensitivity of the electrodes and optimize electrode sensitivity for different bioimpedance sensing applications.

Improved performance of micro-fabricated preconcentrators using silica nanoparticles as a surface template.

A new approach of enhancing the adsorption capability of the widely used polymer adsorbent Tenax TA poly(2,6-diphenylene oxide) through its deposition on a nano-structured template is reported. The modified Tenax TA-coated silica nanoparticles (SNP) are incorporated as an adsorbent bed in silicon based micro-thermal preconcentrator (µTPC) chips with an array of square microposts embedded inside the cavity and sealed with a Pyrex cover. The interior surface of the chip is first modified by depositing SNP using a layer-by-layer self-assembly technique followed by coating with Tenax TA. The adsorption capacity of the SNP-Tenax TA µTPC is enhanced by as much as a factor of three compared to the one coated solely with thin film Tenax TA for the compounds tested. The increased adsorption ability of the Tenax TA is attributed to the higher surface area provided by the underlying porous SNP coating and the pores between SNPs affecting the morphology of deposited Tenax TA film by bringing nano-scale features into the polymer. In addition, the adsorption ability of the SNP coating as a pseudo-selective inorganic adsorption bed for polar compounds was also observed. The modified Tenax TA-coated SNP µTPC is a promising development toward integrated micro-gas chromatography systems.

High quality factor silica microspheres functionalized with self-assembled nanomaterials.

With extremely low material absorption and exceptional surface smoothness, silica-based optical resonators can achieve extremely high cavity quality (Q) factors. However, the intrinsic material limitations of silica (e.g., lack of second order nonlinearity) may limit the potential applications of silica-based high Q resonators. Here we report some results in utilizing layer-by-layer self-assembly to functionalize silica microspheres with nonlinear and plasmonic nanomaterials while maintaining Q factors as high as 10(7). We compare experimentally measured Q factors with theoretical estimates, and find good agreement.

Highly stable surface functionalization of microgas chromatography columns using layer-by-layer self-assembly of silica nanoparticles.

A controllable and high-yield surface functionalization of silicon microchannels using layer-by-layer (LbL) self-assembly of SiO2 nanoparticles (SNPs) is presented. The application of SNPs (45 nm average diameter) coating as a stationary phase for chromatographic separation is also demonstrated with surface functionalization using chloroalkylsilanes. This method facilitates a simple, low-cost, and parallel processing scheme that also provides homogeneous and stable nanoparticle-based stationary phases with ease of control over the coating thickness. The SNP-functionalized microfabricated columns with either single capillary channels (1 m long, 150 µm wide, 240 µm deep) or very narrow multicapillary channels (25 cm long, 30 µm wide, 240 µm deep, 16 parallel channels) successfully separated a multicomponent gas mixture with a wide range of boiling points with high reproducibility.

RAFT synthesis of ABA triblock copolymers as ionic liquid-containing electroactive membranes.

2-(Dimethylamino)ethyl acrylate (DMAEA) imparts versatile functionality to poly[Sty-b-(nBA-co-DMAEA)-b-Sty] ABA triblock copolymers. A controlled synthetic strategy minimized chain transfer reactions and enabled the preparation of high-molecular-weight ABA triblock copolymers with relatively narrow PDIs between 1.39 and 1.44 using reversible addition-fragmentation chain transfer (RAFT) polymerization. The presence of tertiary amine functionality and their zwitterionic derivatives in the central blocks of the triblock copolymers afforded tunable polarity toward ionic liquids. Gravimetric measurements determined the swelling capacity of the triblock copolymers for ionic liquids (IL) 1-ethyl-3-methylimidazolium trifluoromethanesulfonate (EMIm TfO) and 1-ethyl-3-methylimidazolium ethylsulfate (EMIm ES). A correlation of differential scanning calorimetry (DSC), dynamic mechanical analysis (DMA), and small-angle X-ray scattering (SAXS) results revealed the impact of ionic liquid incorporation on the thermal transitions, thermomechanical properties, and morphologies of the triblock copolymers. IL-containing membranes of DMAEA-derived triblock copolymers and EMIm TfO exhibited desirable rubbery plateau moduli of ~100 MPa and electromechanical actuation to a 4 V electrical stimulus. Maintaining the mechanical ductility of polymer matrices while increasing their ion-conductivity is paramount for future electroactive devices.

Demonstration of a cylindrically symmetric second-order nonlinear fiber with self-assembled organic surface layers.

We report the fabrication and characterization of a cylindrically symmetric fiber structure that possesses significant and thermodynamically stable second-order nonlinearity. Such fiber structure is produced through nanoscale self-assembly of nonlinear molecules on a silica fiber taper and possesses full rotational symmetry. Despite its highly symmetric configuration, we observed significant second harmonic generation (SHG) and obtained good agreement between experimental results and theoretical predictions.

Nanoscale patterning of ionic self-assembled multilayers.

Films that are nanostructured in all three dimensions can be fabricated by the templated growth of ionic self-assembled multilayers (ISAMs) on solids that have been patterned by nanografting. Nanografting was used to controllably pattern -COOH surface groups on a background of -OH groups. Atomic force microscopy (AFM) confirms that ISAM bilayers grow selectively on the -COOH groups and not on the surrounding -OH groups. The patterned area clearly shows an increase in height with an increase in the number of bilayers. As compared with other methods of nanofabrication, nanografting with ISAM deposition provides fast and precise control over the size of the pattern region, which remains stable even after repeated washing. This combination allows the fabricated template to be altered in situ without the need of any kind of mask, expensive probe, or post-lithography processing/cleaning methods. We have demonstrated line widths of 75 nm. Ultimately the line width is limited by the width of the AFM tip that causes desorption of the thiol, which is typically about 25 nm. Smaller line widths should be possible with the use of sharper AFM tips.

High-contrast solid-state electrochromic devices of viologen-bridged polysilsesquioxane nanoparticles fabricated by layer-by-layer assembly.

Water-soluble silsesquioxane nanoparticles (NPs) incorporating viologen groups (PXV; 1,1'-bis[3-(trimethoxysilyl)propyl]-4,4'-bipyridinium iodide) have been synthesized by sol-gel polymerization. The electrochromic properties of the bulk film fabricated by layer-by-layer (LbL) assembly have been examined, along with their incorporation into solid-state devices. The orange LbL films show high thermal stability and exhibit a maximum UV-vis absorption at 550 nm. Electrochromic switching of the NPs in liquid electrolyte as well as in the solid state was evaluated by a kinetic study via measurement of the change in transmission (% T) at the maximum contrast. Cyclic voltammograms of the PXV NP LbL films exhibit a reversible reduction at -0.6 V vs Ag/AgCl in a 0.1 M NaClO4(aq) solution, revealing good electrochromic stability, with a color change from orange to dark purple-blue at applied potentials ranging from -0.7 to -1.3 V. Cathodically coloring PXV NP solid-state devices exhibit a switching time of a few seconds between the purple-blue reduced state and the orange oxidized state, showing a contrast of 50% at 550 nm and a coloration efficiency of 205 cm2/C. Their solubility and fairly fast electrochromic switching ( approximately 3 s) at low switching voltages (between 0 and 3.0 V), along with their stability under atmospheric conditions, make PXV NPs good candidates for electrochromic displays.

Study of film structure and adsorption kinetics of polyelectrolyte multilayer films: effect of pH and polymer concentration.

The alternate adsorption of polycation poly(allylamine hydrochloride)(PAH) and the sodium salt of the polymeric dye poly(1-[ p-(3'-carboxy-4'-hydroxyphenylazo)benzenesulfonamido]-1,2-ethandiyl)(PCBS) on quartz crystals coated with silica was studied to understand the structural properties and adsorption kinetics of these films using a combination of quartz crystal microbalance with dissipation monitoring (QCM-D), absorbance, and ellipsometry measurements. In-situ deposition of the polycation PAH on QCM crystals was monitored, followed by rinsing with water and then deposition of the polyanion PCBS. The effects of polymer concentration and pH on film structure, composition and adsorption kinetics were probed. The polymers were adsorbed at neutral pH conditions and at elevated pH conditions where PAH was essentially uncharged to obtain much thicker films. The change in the resonant frequency, Deltaf, of the QCM-D showed a linear decrease with the number of bilayers, a finding consistent with absorbance and ellipsometric thickness measurements which showed linear growth of film thickness. By using the Delta f ratios of PCBS to PAH, the molar ratios of repeat units of PCBS to PAH in the bilayer films as determined by QCM-D were approximately 1:1 at polyelectrolyte concentrations 5-10 mM repeat unit, indicating complete dissociation of the ionic groups. The frequency and dissipation data from the QCM-D experiments were analyzed with the Voigt model to estimate the thickness of the hydrated films which were then compared with thicknesses of dry films measured by ellipsometry. This led to estimates of the water content of the films to be approximately 45 wt %. In addition to the QCM-D, some films were also characterized by a QCM which measures only the first harmonic without dissipation monitoring. For the deposition conditions studied, the deposited mass values measured by the QCM's first harmonic were similar to the results obtained using higher harmonics from QCM-D, indicating that the self-assembled polyelectrolyte films were rigid.

High contrast solid state electrochromic devices based on Ruthenium Purple nanocomposites fabricated by layer-by-layer assembly.

Electrochromic Ruthenium Purple-polymer nanocomposite films, fabricated by multilayer assembly, were found to exhibit sub-second switching speed and the highest electrochromic contrast reported to date for any inorganic material.