High-Resolution ENDOR Spectroscopy Combined with Quantum Chemical Calculations Reveals the Structure of Nitrogenase Janus Intermediate E4(4H).

We have shown that the key state in N2 reduction to two NH3 molecules by the enzyme nitrogenase is E4(4H), the "Janus" intermediate, which has accumulated four [e-/H+] and is poised to undergo reductive elimination of H2 coupled to N2 binding and activation. Initial 1H and 95Mo ENDOR studies of freeze-trapped E4(4H) revealed that the catalytic multimetallic cluster (FeMo-co) binds two Fe-bridging hydrides, [Fe-H-Fe]. However, the analysis failed to provide a satisfactory picture of the relative spatial relationships of the two [Fe-H-Fe]. Our recent density functional theory (DFT) study yielded a lowest-energy form, denoted as E4(4H)(a), with two parallel Fe-H-Fe planes bridging pairs of "anchor" Fe on the Fe2,3,6,7 face of FeMo-co. However, the relative energies of structures E4(4H)(b), with one bridging and one terminal hydride, and E4(4H)(c), with one pair of anchor Fe supporting two bridging hydrides, were not beyond the uncertainties in the calculation. Moreover, a structure of V-dependent nitrogenase resulted in a proposed structure analogous to E4(4H)(c), and additional structures have been proposed in the DFT studies of others. To resolve the nature of hydride binding to the Janus intermediate, we performed exhaustive, high-resolution CW-stochastic 1H-ENDOR experiments using improved instrumentation, Mims 2H ENDOR, and a recently developed pulsed-ENDOR protocol ("PESTRE") to obtain absolute hyperfine interaction signs. These measurements are coupled to DFT structural models through an analytical point-dipole Hamiltonian for the hydride electron-nuclear dipolar coupling to its "anchoring" Fe ions, an approach that overcomes limitations inherent in both experimental interpretation and computational accuracy. The result is the freeze-trapped, lowest-energy Janus intermediate structure, E4(4H)(a).

Across the tree of life, radiation resistance is governed by antioxidant Mn2+, gauged by paramagnetic resonance.

Despite concerted functional genomic efforts to understand the complex phenotype of ionizing radiation (IR) resistance, a genome sequence cannot predict whether a cell is IR-resistant or not. Instead, we report that absorption-display electron paramagnetic resonance (EPR) spectroscopy of nonirradiated cells is highly diagnostic of IR survival and repair efficiency of DNA double-strand breaks (DSBs) caused by exposure to gamma radiation across archaea, bacteria, and eukaryotes, including fungi and human cells. IR-resistant cells, which are efficient at DSB repair, contain a high cellular content of manganous ions (Mn2+) in high-symmetry (H) antioxidant complexes with small metabolites (e.g., orthophosphate, peptides), which exhibit narrow EPR signals (small zero-field splitting). In contrast, Mn2+ ions in IR-sensitive cells, which are inefficient at DSB repair, exist largely as low-symmetry (L) complexes with substantially broadened spectra seen with enzymes and strongly chelating ligands. The fraction of cellular Mn2+ present as H-complexes (H-Mn2+), as measured by EPR of live, nonirradiated Mn-replete cells, is now the strongest known gauge of biological IR resistance between and within organisms representing all three domains of life: Antioxidant H-Mn2+ complexes, not antioxidant enzymes (e.g., Mn superoxide dismutase), govern IR survival. As the pool of intracellular metabolites needed to form H-Mn2+ complexes depends on the nutritional status of the cell, we conclude that IR resistance is predominantly a metabolic phenomenon. In a cross-kingdom analysis, the vast differences in taxonomic classification, genome size, and radioresistance between cell types studied here support that IR resistance is not controlled by the repertoire of DNA repair and antioxidant enzymes.

13C ENDOR Spectroscopy of Lipoxygenase-Substrate Complexes Reveals the Structural Basis for C-H Activation by Tunneling.

In enzymatic C-H activation by hydrogen tunneling, reduced barrier width is important for efficient hydrogen wave function overlap during catalysis. For native enzymes displaying nonadiabatic tunneling, the dominant reactive hydrogen donor-acceptor distance (DAD) is typically ca. 2.7 Å, considerably shorter than normal van der Waals distances. Without a ground state substrate-bound structure for the prototypical nonadiabatic tunneling system, soybean lipoxygenase (SLO), it has remained unclear whether the requisite close tunneling distance occurs through an unusual ground state active site arrangement or by thermally sampling conformational substates. Herein, we introduce Mn2+ as a spin-probe surrogate for the SLO Fe ion; X-ray diffraction shows Mn-SLO is structurally faithful to the native enzyme. 13C ENDOR then reveals the locations of 13C10 and reactive 13C11 of linoleic acid relative to the metal; 1H ENDOR and molecular dynamics simulations of the fully solvated SLO model using ENDOR-derived restraints give additional metrical information. The resulting three-dimensional representation of the SLO active site ground state contains a reactive (a) conformer with hydrogen DAD of ∼3.1 Å, approximately van der Waals contact, plus an inactive (b) conformer with even longer DAD, establishing that stochastic conformational sampling is required to achieve reactive tunneling geometries. Tunneling-impaired SLO variants show increased DADs and variations in substrate positioning and rigidity, confirming previous kinetic and theoretical predictions of such behavior. Overall, this investigation highlights the (i) predictive power of nonadiabatic quantum treatments of proton-coupled electron transfer in SLO and (ii) sensitivity of ENDOR probes to test, detect, and corroborate kinetically predicted trends in active site reactivity and to reveal unexpected features of active site architecture.

Switching from antiferromagnetic to ferromagnetic coupling in heptanuclear [M(t)6M(c)](n+) complexes by going from an achiral to a chiral triplesalen ligand.

The chiral triplesalen ligand H6chand(RR) has been used to synthesize the chiral heptanuclear complexes [{(chand(RR))Mn(III)3}2{Fe(II)(CN)6}](ClO4)2 ((RR)[Mn(III)6Fe(II)](ClO4)2) and [{(chand(RR))Fe(III)3}2{Fe(II)(CN)6}](ClO4)2 ((RR)[Fe(III)6Fe(II)](ClO4)2), which have been characterized by single-crystal X-ray diffraction, mass spectrometry, elemental analysis, FT-IR, Mössbauer, and UV-vis spectroscopies, electrochemistry, as well as DC and AC magnetic susceptibility measurements. The half-wave potential of the Fe(III)/Fe(II) couple in (RR)[Mn(III)6Fe(II)](2+) and (RR)[Fe(III)6Fe(II)](2+) is E1/2 = +0.21 and +0.75 V vs. Fc(+)/Fc, respectively, which (i) corresponds to a strong stabilization of the reduced Fe(II) species compared to the redox couple of free [Fe(II/III)(CN)6](4-/3-) and (ii) indicates a significant difference of the electronic coupling with the {(chand(RR))M(t)}(3+) units (M(t) = Mn(III), Fe(III)). Analysis of the DC magnetic data (µeffvs. T, VTVH) of both complexes by a full-matrix diagonalization of the spin-Hamiltonian including isotropic exchange, zero-field splitting with full consideration of the relative orientation of the D tensors and Zeeman interactions reveals ferromagnetic interactions of JMn-Mn = +0.17 ± 0.02 cm(-1) with DMn = -3.4 ± 0.3 cm(-1) for (RR)[Mn(III)6Fe(II)](2+) and JFe-Fe = +0.235 ± 0.005 cm(-1) with DFe = 0 for (RR)[Fe(III)6Fe(II)](2+). The comparison of the molecular structures of (RR)[Mn(III)6Fe(II)](2+) and (RR)[Fe(III)6Fe(II)](2+) with those of the heptanuclear complexes [M(t)6M(c)](n+) using the achiral triplesalen ligand (talen(t-Bu2))(6-) reveals significant differences in the ligand folding, smaller C-C bond distances in the central phloroglucinol ring and larger HOMA values. This indicates more aromatic character and less heteroradialene contribution in (RR)[Mn(III)6Fe(II)](2+) and (RR)[Fe(III)6Fe(II)](2+), which explains the switching from antiferromagnetic coupling in [M(t)6M(c)](n+) to ferromagnetic coupling in (RR)[M(t)6M(c)](n+) by a stronger contribution of the spin-polarization mechanism. This establishes a magnetostructural correlation between the structural parameters describing the aromaticity of the central phloroglucinol unit and the observed exchange couplings JMn-Mn.

Crystallographic order and decomposition of [MnIII6CrIII]3+ single-molecule magnets deposited in submonolayers and monolayers on HOPG studied by means of molecular resolved atomic force microscopy (AFM) and Kelvin probe force microscopy in UHV.

Monolayers and submonolayers of [MnIII6CrIII]3+ single-molecule magnets (SMMs) adsorbed on highly oriented pyrolytic graphite (HOPG) using the droplet technique characterized by non-contact atomic force microscopy (nc-AFM) as well as by Kelvin probe force microscopy (KPFM) show island-like structures with heights resembling the height of the molecule. Furthermore, islands were found which revealed ordered 1D as well as 2D structures with periods close to the width of the SMMs. Along this, islands which show half the heights of intact SMMs were observed which are evidences for a decomposing process of the molecules during the preparation. Finally, models for the structure of the ordered SMM adsorbates are proposed to explain the observations.

Strong and anisotropic superexchange in the single-molecule magnet (SMM) [MnIII(6)OsIII]3+: promoting SMM behavior through 3d-5d transition metal substitution.

The reaction of the in situ generated trinuclear triplesalen complex [(talent-Bu2)MnIII3(solv)n]3+ with (Ph4P)3[OsIII(CN)6] and NaClO4·H2O affords [MnIII6OsIII](ClO4)3 (= [{(talent-Bu2)MnIII3}2{OsIII(CN)6}](ClO4)3) in the presence of the oxidizing agent [(tacn)2NiIII](ClO4)3 (tacn =1,4,7-triazacyclononane), while the reaction of [(talent-Bu2)MnIII3(solv)n]3+ with K4[OsII(CN)6] and NaClO4·H2O yields [MnIII6OsII](ClO4)2 under an argon atmosphere. The molecular structure of [MnIII6OsIII]3+ as determined by single-crystal X-ray diffraction is closely related to the already published [MnIII6Mc]3+ complexes (Mc = CrIII, FeIII, CoIII, MnIII). The half-wave potential of the OsIII/OsII couple is E1/2 = 0.07 V vs Fc+/Fc. The FT-IR and electronic absorption spectra of [MnIII6OsII]2+ and [MnIII6OsIII]3+ exhibit distinct features of dicationic and tricationic [MnIII6Mc]n+ complexes, respectively. The dc magnetic data (µeff vs T, M vs B, and VTVH) of [MnIII6OsII]2+ are successfully simulated by a full-matrix diagonalization of a spin-Hamiltonian including isotropic exchange, zero-field splitting with full consideration of the relative orientation of the D-tensors, and Zeeman interaction, indicating antiferromagnetic MnIII­MnIII interactions within the trinuclear triplesalen subunits (JMn­Mn(1) = −(0.53 ± 0.01) cm­1, Hex = −2∑i

Environmental influence on the single-molecule magnet behavior of [Mn(III)6Cr(III)]3+: molecular symmetry versus solid-state effects.

The structural, spectroscopic, and magnetic properties of a series of [Mn(III)(6)Cr(III)](3+) (= [{(talen(t-Bu(2)))Mn(III)(3)}(2){Cr(III)(CN)(6)}](3+)) compounds have been investigated by single-crystal X-ray diffraction (XRD), Fourier transform infrared (FT-IR) and electronic absorption spectroscopy, elemental analysis, electro spray ionization-mass spectrometry (ESI-MS) and matrix-assisted laser desorption ionization-mass spectrometry (MALDI-MS), cyclic voltammetry, AC and DC magnetic measurements, as well as theoretical analysis. The crystal structures obtained with [Cr(III)(CN)(6)](3-) as a counterion exhibit (quasi-)one-dimensional (1D) chains formed by hydrogen-bonded (1) or covalently linked (2) trications and trianions. The rod-shaped anion lactate enforces a rod packing of the [Mn(III)(6)Cr(III)](3+) complexes in the highly symmetric space group R3[overline] (3) with a collinear arrangement of the molecular S(6) axes. Incorporation of the spherical anion BPh(4)(-) leads to less-symmetric crystal structures (4-6) with noncollinear orientations of the [Mn(III)(6)Cr(III)](3+) complexes, as evidenced by the angle between the approximate molecular C(3) axes taking no specific values in the range of 2°-69°. AC magnetic measurements on freshly isolated crystals (1a and 3a-6a), air-dried crystals (3b-6b), and vacuum-dried powder samples (3c-6c) indicate single-molecule magnet (SMM) behavior for all samples with U(eff) values up to 28 K. The DC magnetic data are analyzed by a full-matrix diagonalization of the appropriate spin-Hamiltonian including isotropic exchange, zero-field splitting, and Zeeman interaction, taking into account the relative orientation of the D-tensors. Simulations for 3a-6a and 3c-6c indicate a weak antiferromagnetic exchange between the Mn(III) ions in the trinuclear subunits (J(Mn-Mn) = -0.70 to -0.85 cm(-1), H(ex) = -2∑(i

Structural influences on the exchange coupling and zero-field splitting in the single-molecule magnet [Mn(III)6Mn(III)]3+.

A comprehensive synthetic, structural, mass spectrometrical, FT-IR and UV/Vis spectroscopic, electrochemical, and magnetic study on [Mn(III)(6)Mn(III)](3+) (= [{(talen(t-Bu(2)))Mn(III)(3)}(2){Mn(III)(CN)(6)}](3+)) is presented. The high stability of [Mn(III)(6)Mn(III)](3+) in solution allows the preparation of different salts and solvates: [Mn(III)(6)Mn(III)](BPh(4))(3)·3MeOH·3MeCN·3Et(2)O (), [Mn(III)(6)Mn(III)(MeOH)(4)](BPh(4))(3)·5MeOH (), [Mn(III)(6)Mn(III)(MeOH)(6)](BF(4))(3)·9MeOH (), [Mn(III)(6)Mn(III)(MeOH)(6)](PF(6))(2)(OAc)·11MeOH (), and [Mn(III)(6)Mn(III)(MeOH)(6)](lactate)(3)·5MeOH·10H(2)O (). The molecular structure of [Mn(III)(6)Mn(III)](3+) is closely related to the already published [Mn(III)(6)M(c)](3+) complexes (M(c) = Cr(III), Fe(III), Co(III)). ESI mass spectra exhibit the signal of the [{(talen(t-Bu(2)))Mn(III)(3)}(2){Mn(III)(CN)(6)}](3+) trication. FT-IR spectra show the characteristic bands of the triplesalen ligand in [Mn(III)(6)M(c)](3+) and the symmetric ν(C≡N) vibration of the [Mn(III)(CN)(6)](3-) unit at 2135 cm(-1). UV/Vis spectra are dominated by intense transitions of the trinuclear Mn(III)(3) triplesalen subunits above 20,000 cm(-1). The electrochemical studies establish the occurrence of ligand-centered oxidations at ≈1.0 V vs. Fc(+)/Fc, an oxidation of the central Mn(III) at 0.78 V, and a series of reductions of the terminal Mn(III) ions between -0.6 and -1.2 V. AC magnetic measurements indicate single-molecule magnet (SMM) behavior for all compounds. The DC magnetic data are analyzed by a full-matrix diagonalization of the appropriate spin-Hamiltonian including isotropic exchange, zero-field splitting with full consideration of the relative orientation of the D-tensors, and Zeeman interaction, taking into account the diamagnetic nature of the central Mn(III) at low temperatures as inferred from a previous ab initio study. The spin-Hamiltonian simulations indicate Mn(III)-Mn(III) interactions in the -0.37 to -0.70 cm(-1) range within the trinuclear triplesalen subunits and in the -0.02 to +0.23 cm(-1) range across the central Mn(III) ion, while D(Mn) = -3.1 to -5.0 cm(-1). The differences in the exchange parameters and the relaxation behavior of the [Mn(III)(6)Mn(III)](3+) compounds are rationalized in terms of subtle variations in the molecular structures, especially regarding the distortion of the central [Mn(III)(CN)(6)](3-) core and the ligand folding. In comparison with the other [Mn(III)(6)M(c)](3+) compounds, this allows us to establish some general magnetostructural correlations for this class of complexes.

Preparation of monolayers of [MnIII6CrIII]3+ single-molecule magnets on HOPG, mica and silicon surfaces and characterization by means of non-contact AFM.

We report on the characterization of various salts of [MnIII6CrIII]3+ complexes prepared on substrates such as highly oriented pyrolytic graphite (HOPG), mica, SiO2, and Si3N4. [MnIII6CrIII]3+ is a single-molecule magnet, i.e., a superparamagnetic molecule, with a blocking temperature around 2 K. The three positive charges of [MnIII6CrIII]3+ were electrically neutralized by use of various anions such as tetraphenylborate (BPh4-), lactate (C3H5O3-), or perchlorate (ClO4-). The molecule was prepared on the substrates out of solution using the droplet technique. The main subject of investigation was how the anions and substrates influence the emerging surface topology during and after the preparation. Regarding HOPG and SiO2, flat island-like and hemispheric-shaped structures were created. We observed a strong correlation between the electronic properties of the substrate and the analyzed structures, especially in the case of mica where we observed a gradient in the analyzed structures across the surface.

Spin resolved photoelectron spectroscopy of [Mn6(III)Cr(III)]3+ single-molecule magnets and of manganese compounds as reference layers.

Properties of the manganese-based single-molecule magnet [Mn(6)(III)Cr(III)](3+) are studied. It contains six Mn(III) ions arranged in two bowl-shaped trinuclear triplesalen building blocks linked by a hexacyanochromate and exhibits a large spin ground state of S(t) = 21/2. The dominant structures in the electron emission spectra of [Mn(6)(III)Cr(III)](3+) resonantly excited at the L(3)-edge are the L(3)M(2, 3)M(2, 3), L(3)M(2, 3)V and L(3)VV Auger emission groups following the decay of the primary p(3/2) core hole state. Significant differences of the Auger spectra from intact and degraded [Mn(6)(III)Cr(III)](3+) show up. First measurements of the electron spin polarization in the L(3)M(2, 3)V and L(3)VV Auger emission peaks from the manganese constituents in [Mn(6)(III)Cr(III)](3+) resonantly excited at the L(3)-edge near 640 eV by circularly polarized synchrotron radiation are reported. In addition spin resolved Auger electron spectra of the reference substances MnO, Mn(2)O(3) and Mn(II)(acetate)(2)·4H(2)O are given. The applicability of spin resolved electron spectroscopy for characterizing magnetic states of constituent atoms compared to magnetic circular dichroism (MCD) is verified: the spin polarization obtained from Mn(II)(acetate)(2)·4H(2)O at room temperature in the paramagnetic state compares to the MCD asymmetry revealed for a star-shaped molecule with a Mn(4)(II)O(6) core at 5 K in an external magnetic field of 5 T.