Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 31
Filtrar
Mais filtros










Base de dados
Intervalo de ano de publicação
1.
Phys Chem Chem Phys ; 13(41): 18373-8, 2011 Nov 07.
Artigo em Inglês | MEDLINE | ID: mdl-21826349

RESUMO

Electron capture by doubly charged peptide cations leads to neutral losses in addition to N-C(α) bond cleavages that give c and z fragments. In this work we discuss the influence of amino acid sequence on hydrogen versus ammonia loss and the propensity for subsequent partial side-chain cleavage after ammonia loss to give w fragment ions. Experiments were done on two series of doubly protonated dipeptides, [XK+2H](2+) and [XR+2H](2+), where X is one of the twenty common amino acid residues, excluding aspartic acid (D), and K and R are lysine and arginine, respectively. While it was previously established that NH(3) is lost exclusively from the N-terminal ammonium group and not from side-chain ammonium groups, we find here that ammonia can be lost from guanidinium radicals as well. The ratio between H loss and NH(3) loss reveals some information on internal ionic hydrogen bonds and peptide conformation since proton sharing between the N-terminal ammonium group and a basic side chain decreases the probability for NH(3) loss due to a lower recombination energy and as a result reduced capture probability. The abundance of w ions was found to correlate with the reaction energy for their formation; highest yield was found for CK and lowest for AK and HK. The survival rate of charge-reduced species was higher for XR than for XK, which is likely linked to the formation of long-lived C(α) radicals in the latter case. The probability for N-C(α) bond cleavage is smaller on average for XR than for XK which indicates that hydrogen transfer from the ε-ammonium radical to the amide group triggers some of the cleavages, or is a result of the different distances between the amide group and the charges in XR and XK. Finally, our data support the previous concept that charge partitioning between c and z fragments can be explained by competition between the two fragments for the proton.


Assuntos
Dipeptídeos/química , Elétrons , Sequência de Aminoácidos , Amônia/química , Carbono/química , Guanidina/química , Hidrogênio/química , Nitrogênio/química , Prótons
2.
J Am Soc Mass Spectrom ; 22(4): 731-51, 2011 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21472611

RESUMO

Electron transfer and capture mass spectra of a series of doubly charged ions that were phosphorylated pentapeptides of a tryptic type (pS,A,A,A,R) showed conspicuous differences in dissociations of charge-reduced ions. Electron transfer from both gaseous cesium atoms at 100 keV kinetic energies and fluoranthene anion radicals in an ion trap resulted in the loss of a hydrogen atom, ammonia, and backbone cleavages forming complete series of sequence z ions. Elimination of phosphoric acid was negligible. In contrast, capture of low-energy electrons by doubly charged ions in a Penning ion trap induced loss of a hydrogen atom followed by elimination of phosphoric acid as the dominant dissociation channel. Backbone dissociations of charge-reduced ions also occurred but were accompanied by extensive fragmentation of the primary products. z-Ions that were terminated with a deaminated phosphoserine radical competitively eliminated phosphoric acid and H(2)PO(4) radicals. A mechanism is proposed for this novel dissociation on the basis of a computational analysis of reaction pathways and transition states. Electronic structure theory calculations in combination with extensive molecular dynamics mapping of the potential energy surface provided structures for the precursor phosphopeptide dications. Electron attachment produces a multitude of low lying electronic states in charge-reduced ions that determine their reactivity in backbone dissociations and H- atom loss. The predominant loss of H atoms in ECD is explained by a distortion of the Rydberg orbital space by the strong dipolar field of the peptide dication framework. The dipolar field steers the incoming electron to preferentially attach to the positively charged arginine side chain to form guanidinium radicals and trigger their dissociations.


Assuntos
Oligopeptídeos/química , Fosfopeptídeos/química , Simulação por Computador , Elétrons , Espectrometria de Massas , Modelos Moleculares
3.
J Am Chem Soc ; 132(31): 10728-40, 2010 Aug 11.
Artigo em Inglês | MEDLINE | ID: mdl-20681705

RESUMO

Electron-transfer and -capture dissociations of doubly protonated peptides gave dramatically different product ions for a series of histidine-containing pentapeptides of both non-tryptic (AAHAL, AHAAL, AHADL, AHDAL) and tryptic (AAAHK, AAHAK, AHAAK, HAAAK, AAAHR, AAHAR, AHAAR, HAAAR) type. Electron transfer from gaseous Cs atoms and fluoranthene anions triggered backbone dissociations of all four N-C(alpha) bonds in the peptide ions in addition to loss of H and NH(3). Substantial fractions of charge-reduced cation-radicals did not dissociate on an experimental time scale ranging from 10(-6) to 10(-1) s. Multistage tandem mass spectrometric (MS(n)) experiments indicated that the non-dissociating cation-radicals had undergone rearrangements. These were explained as being due to proton migrations from N-terminal ammonium and COOH groups to the C-2' position of the reduced His ring, resulting in substantial radical stabilization. Ab initio calculations revealed that the charge-reduced cation-radicals can exist as low-energy zwitterionic amide pi* states which were local energy minima. These states underwent facile exothermic proton migrations to form aminoketyl radical intermediates, whereas direct N-C(alpha) bond cleavage in zwitterions was disfavored. RRKM analysis indicated that backbone N-C(alpha) bond cleavages did not occur competitively from a single charge-reduced precursor. Rather, these bond cleavages proceeded from distinct intermediates which originated from different electronic states accessed by electron transfer. In stark contrast to electron transfer, capture of a free electron by the peptide ions mainly induced radical dissociations of the charge-carrying side chains and loss of a hydrogen atom followed by standard backbone dissociations of even-electron ions. The differences in dissociation are explained by different electronic states being accessed upon electron transfer and capture.


Assuntos
Elétrons , Histidina/química , Peptídeos/química , Cátions/química , Simulação por Computador , Radicais Livres/química , Conformação Proteica
4.
J Phys Chem A ; 114(27): 7301-10, 2010 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-20568791

RESUMO

Mass spectrometric experiments show that protonated mixed ammonia/water clusters predominant exist in three forms namely H(+)(NH(3))(4)(H(2)O)(n), H(+)(NH(3))(5)(H(2)O)(n), and H(+)(NH(3))(6)(H(2)O)(n) (n = 1-25). For the first two series the collisional activation mass spectra are dominated by loss of water, whereas ions of the latter series preferably lose ammonia. The quantitative characteristics of these observations are reproduced by quantum chemical calculations that also provide insight into the geometrical structures of the clusters. Although the experiments and the calculations agree that clusters with five ammonia are thermodynamically preferred, this does not indicate a rigid tetrahedral structure with one central ammonium covered with an inner solvation shell of four ammonia molecules, with water outside. Instead, water and ammonia have comparable affinities to the binding sites of the first shell, with a preference for ammonia for the first two sites, and water for the last two. The "leftover" ammonia molecules bind equally strong as water molecules to sites in the second shell due to synergistic hydrogen binding. Finally, it is discussed whether the observation of enhanced stability of the H(+)(NH(3))(5)(H(2)O)(20) in terms of magic numbers and associated geometries may be related to a tetrahedral ammonium core encapsulated in a dodecahedral (H(2)O)(20) structure, typically found in clathrates.


Assuntos
Amônia/química , Prótons , Água/química , Simulação por Computador , Espectrometria de Massas , Estrutura Molecular , Tamanho da Partícula , Teoria Quântica , Termodinâmica
5.
Artigo em Inglês | MEDLINE | ID: mdl-19940334

RESUMO

In this work, we have subjected protonated nucleobases MH(+) (M = guanine, adenine, thymine, uracil and cytosine) to a range of experiments that involve high-energy (50 keV) collision induced dissociation and electron capture induced dissociation. In the latter case, both neutralisation reionisation and charge reversal were done. For the collision induced dissociation experiments, the ions interacted with O(2). In neutral reionisation, caesium atoms were used as the target gas and the protonated nucleobases captured electrons to give neutrals. These were reionised to cations a microsecond later in collisions with O(2). In choosing Cs as the target gas, we have assured that the first electron transfer process is favourable (by about 0.1-0.8 eV depending on the base). In the case of protonated adenine, charge reversal experiments (two Cs collisions) were also carried out, with the results corroborating those from the neutralisation reionisation experiments. We find that while collisional excitation of protonated nucleobases in O(2) may lead to hydrogen loss with limited probabilities, this channel becomes dominant for electron capture events. Indeed, when sampling reionised neutrals on a microsecond timescale, we see that the ratio between MH(+) and M(+) is 0.2-0.4 when one electron is captured from Cs. There are differences in these ratios between the bases but no obvious correlation with recombination energies was found.

6.
J Am Chem Soc ; 131(45): 16472-87, 2009 Nov 18.
Artigo em Inglês | MEDLINE | ID: mdl-19860422

RESUMO

We report an unusual prototropic rearrangement in gas-phase radicals formed by collisional electron transfer from cesium atoms to protonated peptides HAL, AHL, and ALH at 50 keV. The rearrangement depends on the peptide amino acid sequence and presence or steric accessibility of a free carboxyl group. Upon electron transfer, protonated HAL and ALH rearrange to tautomers that are detected as nondissociated anions in charge-reversal mass spectra. The isomerization is minor in protonated ALH and virtually absent in HAL amide. Electron structure calculations indicate that the gas-phase ions are preferentially protonated in the His imidazole ring and consist of multiple conformers that differ in their hydrogen bonding patterns. Electron transfer to protonated HAL and AHL triggers an exothermic and dynamically barrierless transfer of the carboxyl proton onto the C-2' position of the His ring that occurs on a 120-240 ns time scale. The kinetics of this isomerization are controlled by internal rotations in the radicals to assume conformations favoring the proton transfer. The radical conformations also affect subsequent proton migrations in zwitterionic His imidazoline intermediates that reform the COOH group and result in His ring isomerization. This autocatalytic prototropic rearrangement in gas-phase peptide radicals is analogous to enzyme catalytic reactions involving His and acidic amino acid residues. In contrast to HAL and AHL, the C-2' position is sterically inaccessible in ALH radicals. These radicals undergo proton migrations to the His ring C-5' positions that have moderate energy barriers and are less efficient. RRKM calculations on the combined B3LYP and PMP2/6-311++G(2d,p) potential energy surface of the ground doublet electronic state of the peptide radicals provided rate constants that were quantitatively consistent with the dissociations observed in the gas phase. The formation of minor sequence z(1) and z(2) fragments from AHL was interpreted as occurring in the first excited state of the radical.


Assuntos
Dióxido de Carbono/química , Elétrons , Histidina/química , Peptídeos/química , Prótons , Sequência de Aminoácidos , Catálise , Conformação Proteica
7.
J Mass Spectrom ; 44(10): 1518-31, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-19753554

RESUMO

Transition metal cations Co2+, Ni2+ and Zn2+ form 1 : 1 : 1 ternary complexes with 2,2'-bipyridine (bpy) and peptides in aqueous methanol solutions that have been studied for tripeptides GGG and GGL. Electrospray ionization of these solutions produced singly charged [Metal(bpy)(peptide-H)]+ and doubly charged [Metal(bpy)(peptide)]2+ ions (Metal = metal ion) that underwent charge reduction by glancing collisions with Cs atoms at 50 and 100 keV collision energies. Electron transfer to [Metal(bpy)(peptide)]2+ ions was less than 4.2 eV exoergic and formed abundant fractions of non-dissociated charge-reduced intermediates. Charge-reduced [Metal(bpy)(peptide)]+ ions dissociated by the loss of a hydrogen atom, ammonia, water and ligands that depended on the metal ion. The Ni and Co complexes mainly dissociated by the elimination of ammonia, water, and the peptide ligand. The Zn complex dissociated by the elimination of ammonia and bpy. A sequence-specific fragment was observed only for the Co complex. Electron transfer to [Metal(bpy)(peptide-H)]+ was 0.6-1.6 eV exoergic and formed intermediate radicals that were detected as stable anions after a second electron transfer from Cs. [Metal(bpy)(peptide-H)] neutrals and their anions dissociated by the loss of bpy and peptide ligands with branching ratios that depended on the metal ion. Optimized structures for several spin states, electron transfer and dissociation energies were addressed by combined density functional theory and Møller-Plesset perturbational calculations to aid interpretation of experimental data. The experimentally observed ligand loss and backbone cleavage in charge-reduced [Metal(bpy)(peptide)]+ complexes correlated with the dissociation energies at the present level of theory. The ligand loss in +CR- spectra showed overlap of dissociations in charge-reduced [Metal(bpy)(peptide-H)] complexes and their anionic counterparts which complicated spectra interpretation and correlation with calculated dissociation energies.


Assuntos
Oligopeptídeos/química , Compostos Organometálicos/química , Elementos de Transição/química , Elétrons , Conformação Molecular , Espectrometria de Massas por Ionização por Electrospray/métodos
8.
J Am Soc Mass Spectrom ; 20(10): 1881-9, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-19651526

RESUMO

Here we report on the charge partition between c and z fragments formed after femtosecond collisional electron-transfer from Cs atoms to charge-tagged peptide dications. Peptides chosen for study were Ala-Lys (AK) and Lys-Lys (KK) where one or both of the lysine epsilon-amino groups were trimethylated to provide one or two fixed charges. For peptides with only one charge tag, the other charge was obtained by protonation of an amino group. In some experiments the ammonium group was tagged by 18-crown-6-ether (CE). Since recombination energies decrease in the order: MeNH3+ > NMe4+ > MeNH3+(CE) > NMe4+(CE), it is possible to change the probability for the transferred electron to end up at either the N-terminal or the C-terminal residue by CE attachment. We find, however, that the individual recombination energies have little influence on the relative ratio between the yield of c and z ions as long as there are no mobile protons that can be transferred between the two fragments. Our results can be accounted for by the Utah-Washington model where the electron is captured into an amide pi* orbital that weakens the N-C(alpha) bond and causes its breakage, followed by proton, electron, or hydrogen transfer between the c and z fragments that stay together as an ion-molecule complex for some time. The data are also in accordance with the notion that an amide group competes with the charged groups for the electron. Electron capture by charged groups results in loss of small neutrals such as hydrogen and ammonia.


Assuntos
Alanina/química , Dipeptídeos/química , Espectrometria de Massas/métodos , Modelos Químicos , Elétrons
9.
Phys Chem Chem Phys ; 11(29): 6125-31, 2009 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-19606322

RESUMO

(H(+))(H(2)O)(n) ions (n = 1-72) at 50 keV energies were brought to collide with caesium atoms. The analysis of the products formed for clusters having n > 4 shows that this leads to the formation of a population of (OH(-))(H(2)O)(m) ions with a variable number m. On average, more than half of the water molecules are lost from the cluster in the process. A model can explain the experimental observations where two successive collisions occur within a time period of less than 100 ns. One-electron transfer from caesium to water leading to the loss of one hydrogen atom occurs at each stage. While the first stage is by itself exothermic, the second stage requires additional energy from collisional energy transfer.

10.
Chemphyschem ; 10(9-10): 1619-23, 2009 Jul 13.
Artigo em Inglês | MEDLINE | ID: mdl-19266530

RESUMO

The results from an experimental study of bare and microsolvated peptide monocations in high-energy collisions with cesium vapor are reported. Neutral radicals form after electron capture from cesium, which decay by H loss, NH(3) loss, or N-C(alpha) bond cleavage into characteristic z(*) and c fragments. The neutral fragments are converted into negatively charged species in a second collision with cesium and are identified by means of mass spectrometry. For protonated GA (G = glycine, A = alanine), the branching ratio between NH(3) loss and N-C(alpha) bond cleavage is found to strongly depend on the molecule attached (H(2)O, CH(3)CN, CH(3)OH, and 18-crown-6 ether (CE)). Addition of H(2)O and CH(3)OH increases this ratio whereas CH(3)CN and CE decrease it. For protonated AAA ([AAA+H](+)), a similar effect is observed with methanol, while the ratio between the z(1) and z(2) fragment peaks remains unchanged for the bare and microsolvated species. Density functional theory calculations reveal that in the case of [GA+H](+)(CE), the singly occupied molecular orbital is located mainly on the amide group in accordance with the experimental results.


Assuntos
Íons/química , Peptídeos/química , Cátions/química , Césio/química , Éteres de Coroa/química , Elétrons , Espectrometria de Massas
11.
J Mass Spectrom ; 44(5): 707-24, 2009 May.
Artigo em Inglês | MEDLINE | ID: mdl-19132713

RESUMO

Electron-induced dissociations of gas-phase ternary copper-2,2'-bipyridine complexes of Gly-Gly-Gly and Gly-Gly-Leu were studied on a time scale ranging from 130 ns to several milliseconds using a combination of charge-reversal ((+)CR(-)) and electron-capture-induced dissociation (ECID) measured on a beam instrument and electron capture dissociation (ECD) measured in a Penning trap. Charge-reduced intermediates were observed on the short time scale in the (+)CR(-) and ECID experiments but not in ECD. Ion dissociations following electron transfer or capture mostly occurred by competitive bpy or peptide ligand loss, whereas peptide backbone fragmentations were suppressed in the presence of the ligated metal ion. Extensive electron structure theory calculations using density functional theory and large basis sets provided optimized structures and energies for the precursor ions, charge-reduced intermediates, and dissociation products. The Cu complexes underwent substantial structure changes upon electron capture. Cu was calculated to be pentacoordinated in the most stable singly charged complexes of the [Cu(peptide-H)bpy](+*) type where it carried a approximately +1 atomic charge. Cu coordination in charge-reduced [Cu(peptide-H)bpy] intermediates depended on the spin state. The themodynamically more stable singlet states had tricoordinated Cu, whereas triplet states had a tetracoordinated Cu. Cu was tricoordinated in stable [Cu(peptide-H)bpy](-*) products of electron transfer. [Cu(peptide)bpy](2+*) complexes contained the peptide ligand in a zwitterionic form while Cu was tetracoordinated. Upon electron capture, Cu was tri- or tetracoordinated in the [Cu(peptide)bpy](+) charge-reduced analogs and the peptide ligands underwent prototropic isomerization to canonical forms. The role of excited singlet and triplet electronic states is assessed.


Assuntos
Cobre/química , Espectrometria de Massas/métodos , Oligopeptídeos/química , Elétrons , Gases , Modelos Químicos
12.
J Chem Phys ; 129(18): 184304, 2008 Nov 14.
Artigo em Inglês | MEDLINE | ID: mdl-19045400

RESUMO

The behavior of protonated tryptophan (TrpH(+)) and its complex with 18-crown-6-ether (CE) after photoexcitation has been explored based on measurements of dissociation lifetimes, fragmentation channels, and absorption spectra using an electrostatic ion storage ring. A recent implementation of pulsed power supplies for the ring elements with microsecond response times allows us to identify the daughter ion fragment masses and to disentangle fragmentation that occurs from excited states immediately after photoexcitation from that occurring on a longer time scale of several microseconds to milliseconds. We find that attachment of crown ether significantly alters the dissociation channels since it renders the pisigma(*)(NH(3)) state inaccessible and hence prevents the N-H bond breakage which is an important fragmentation channel of TrpH(+). As a result, on a long time scale (>10 micros), photoexcited TrpH(+)(CE) decays exponentially whereas TrpH(+) displays a power-law decay. The only ions remaining in the latter case are Trp(+) radical cations with a broad internal energy distribution caused by the departing hydrogen. Large changes in the fragment branching ratios as functions of excitation wavelength between 210 and 290 nm were found for both TrpH(+) and TrpH(+)(CE).


Assuntos
Éteres de Coroa/química , Fotólise , Prótons , Triptofano/química , Absorção , Transporte de Elétrons , Indóis/química , Cinética , Espectrometria de Massas , Compostos de Amônio Quaternário/química , Fatores de Tempo
13.
J Phys Chem A ; 112(43): 10721-7, 2008 Oct 30.
Artigo em Inglês | MEDLINE | ID: mdl-18834102

RESUMO

Ion nanocalorimetry is used to investigate the internal energy deposited into M (2+)(H 2O) n , M = Mg ( n = 3-11) and Ca ( n = 3-33), upon 100 keV collisions with a Cs or Ne atom target gas. Dissociation occurs by loss of water molecules from the precursor (charge retention) or by capture of an electron to form a reduced precursor (charge reduction) that can dissociate either by loss of a H atom accompanied by water molecule loss or by exclusively loss of water molecules. Formation of bare CaOH (+) and Ca (+) by these two respective dissociation pathways occurs for clusters with n up to 33 and 17, respectively. From the threshold dissociation energies for the loss of water molecules from the reduced clusters, obtained from binding energies calculated using a discrete implementation of the Thomson liquid drop model and from quantum chemistry, estimates of the internal energy deposition can be obtained. These values can be used to establish a lower limit to the maximum and average energy deposition. Not taking into account effects of a kinetic shift, over 16 eV can be deposited into Ca (2+)(H 2O) 33, the minimum energy necessary to form bare CaOH (+) from the reduced precursor. The electron capture efficiency is at least a factor of 40 greater for collisions of Ca (2+)(H 2O) 9 with Cs than with Ne, reflecting the lower ionization energy of Cs (3.9 eV) compared to Ne (21.6 eV). The branching ratio of the two electron capture dissociation pathways differs significantly for these two target gases, but the distributions of water molecules lost from the reduced precursors are similar. These results suggest that the ionization energy of the target gas has a large effect on the electron capture efficiency, but relatively little effect on the internal energy deposited into the ion. However, the different branching ratios suggest that different electronic excited states may be accessed in the reduced precursor upon collisions with these two different target gases.


Assuntos
Cálcio/química , Calorimetria/métodos , Elétrons , Magnésio/química , Nanotecnologia/métodos , Água/química , Calorimetria/instrumentação , Transferência de Energia , Íons/química , Fatores de Tempo
14.
J Am Chem Soc ; 130(44): 14584-96, 2008 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-18847261

RESUMO

Protonated peptides containing histidine or arginine residues and a free carboxyl group (His-Ala-Ile, His-Ala-Leu, Ala-His-Leu, Ala-Ala-His-Ala-Leu, His-Ala-Ala-Ala-Leu, and Arg-Ala-Ile) form stable anions upon collisional double electron transfer from Cs atoms at 50 keV kinetic energies. This unusual behavior is explained by hidden rearrangements occurring in peptide radical intermediates formed by transfer of the first electron. The rearrangements occur on a approximately 120 ns time scale determined by the radical flight time. Analysis of the conformational space for (His-Ala-Ile + H)(+) precursor cations identified two major conformer groups, 1a(+)-1m(+) and 5a(+)-5h(+) , that differed in their H-bonding patterns and were calculated to collectively account for 39% and 60%, respectively, of the gas-phase ions. One-electron reduction in 1a(+) and 5a(+) triggers exothermic hydrogen atom migration from the terminal COOH group onto the His imidazole ring, forming imidazoline radical intermediates. The intermediate from 5a is characterized by its charge and spin distribution as a novel cation radical-COO(-) salt bridge. The intermediate from 1a undergoes spontaneous isomerization by imidazoline N-H migration, re-forming the COOH group and accomplishing exothermic isomerization of the initial (3H)-imidazole radical to a (2H)-imidazole radical. An analogous unimolecular isomerization in simple imidazole and histidine radicals requires activation energies of 150 kJ mol(-1), and its occurrence in 1a and 5a is due to the promoting effect of the proximate COOH group. The rearrangement is substantially reduced in Ala-Leu-His due to an unfavorable spatial orientation of the imidazole and COOH groups and precluded in the absence of a free carboxyl group in His-Ala-Leu amide. In contrast to His-Ala-Ile and Arg-Ala-Ile, protonated Lys-Ala-Ile does not produce stable anions upon double electron transfer. The radical trapping properties of histidine residues are discussed.


Assuntos
Histidina/química , Peptídeos/química , Cátions , Elétrons , Radicais Livres/química , Gases , Hidrogênio/química , Ligação de Hidrogênio , Imidazolidinas/química , Espectrometria de Massas , Modelos Moleculares , Termodinâmica
15.
J Am Soc Mass Spectrom ; 19(12): 1726-42, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-18799322

RESUMO

Collisional electron transfer from gaseous Cs atoms was studied for singly and doubly protonated peptides Gly-Arg (GR) and Ala-Arg (AR) at 50- and 100-keV kinetic energies. Singly protonated GR and AR were discharged to radicals that in part rearranged by migration of a C(alpha) hydrogen atom onto the guanidine group. The C(alpha)-radical isomers formed were detected as stable anions following transfer of a second electron. In addition to the stabilizing rearrangements, the radicals underwent side-chain and backbone dissociations. The latter formed z fragments that were detected as the corresponding anions. Analysis of the (GR + H)(.) radical potential energy surface using electronic structure theory in combination with Rice-Ramsperger-Kassel-Marcus calculations of rate constants indicated that the arginine C(alpha) hydrogen atom was likely to be transferred to the arginine side-chain on the experimental timescale of

Assuntos
Arginina/química , Dipeptídeos/química , Transporte de Elétrons , Hidrogênio/química , Modelos Moleculares , Estrutura Molecular , Espectrometria de Massas por Ionização por Electrospray , Eletricidade Estática
16.
J Am Chem Soc ; 130(36): 11856-7, 2008 Sep 10.
Artigo em Inglês | MEDLINE | ID: mdl-18700762

RESUMO

In this work, we report the absorption spectra in the Soret band region of isolated Fe(III)-heme+ and Fe(III)-heme+(His) ions in vacuo from action spectroscopy. Fe(III)-heme+ refers to iron(III) coordinated by the dianion of protoporphyrin IX. We find that the absorption of the five-coordinate complex is similar to that of pentacoordinate metmyoglobin variants with hydrophobic binding pockets except for an overall blueshift of about 16 nm. In the case of four-coordinate iron(III), the Soret band is similar to that of five-coordinate iron(III) but much narrower. These spectra serve as a benchmark for theoretical modeling and also serve to identify the coordination state of ferric heme proteins. To our knowledge this is the first unequivocal spectroscopic characterization of isolated 4c ferric heme in the gas phase.


Assuntos
Compostos Férricos/química , Heme/química , Hemina/química , Histidina/química , Espectrofotometria/métodos , Eletricidade Estática
17.
J Am Chem Soc ; 130(24): 7645-54, 2008 Jun 18.
Artigo em Inglês | MEDLINE | ID: mdl-18479138

RESUMO

Radicals formed by electron transfer to protonated arginine have been predicted by theory to undergo an inverse migration of the hydrogen atom from the C(alpha) position to the guanidine carbon atom. Experiments are reported here that confirm that a fraction of arginine and arginine amide radicals undergo such an inverse hydrogen migration. The rearranged arginine and arginine amide C(alpha) radicals are detected as stable anions after charge inversion by collisions with Cs atoms of precursor cations at 3 and 50 keV kinetic energies. RRKM calculations on the B3-PMP2/aug-cc-pVTZ potential energy surface indicate that arginine radicals undergo rapid rotations of the side chain to reach conformations suitable for C(alpha)-H transfer, which is calculated to be fast (k > 10(9) s(-1)) in radicals formed by electron transfer. By contrast, H-atom transfer from the guanidine group onto the carboxyl or amide C=O groups is >50 times slower than the C(alpha)-H atom migration. The guanidine group in arginine radicals is predicted to be a poor hydrogen-atom donor but a good H-atom acceptor and thus can be viewed as a radical trap. This property can explain the frequent observation of nondissociating cation radicals in electron capture and electron transfer mass spectra of arginine-containing peptides.


Assuntos
Arginina/química , Radicais Livres/química , Hidrogênio/química , Peptídeos/química , Arginina/análise , Césio/química , Transporte de Elétrons , Guanidina/química , Cinética , Oxirredução
18.
Rev Sci Instrum ; 79(2 Pt 1): 023107, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-18315283

RESUMO

A new method for time-resolved daughter ion mass spectrometry is presented, based on the electrostatic ion storage ring in Aarhus, ELISA. Ions with high internal energy, e.g., as a result of photoexcitation, dissociate and the yield of neutrals is monitored as a function of time. This gives information on lifetimes in the microsecond to millisecond time range but no information on the fragment masses. To determine the dissociation channels, we have introduced pulsed supplies with switching times of a few microseconds. This allows rapid switching from storage of parent ions to storage of daughter ions, which are dumped into a detector after a number of revolutions in the ring. A fragment mass spectrum is obtained by monitoring the daughter ion signal as a function of the ring voltages. This technique allows identification of the dissociation channels and determination of the time dependent competition between these channels.


Assuntos
Algoritmos , Fontes de Energia Elétrica , Fenômenos Eletromagnéticos/instrumentação , Processamento de Sinais Assistido por Computador/instrumentação , Espectrometria de Massas por Ionização por Electrospray/instrumentação , Eletricidade Estática , Transdutores , Desenho de Equipamento , Análise de Falha de Equipamento , Espectrometria de Massas por Ionização por Electrospray/métodos , Fatores de Tempo
19.
J Am Soc Mass Spectrom ; 19(6): 809-13, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-18276153

RESUMO

Electron-capture induced dissociation of protoporphyrin cations and anions has been studied. The cations captured two electrons in two successive collisions and were converted to the corresponding even-electron anions. About one fifth of the ions lost a hydrogen atom to become radical anions but otherwise very little fragmentation was observed. The anions captured an electron to become dianions. No hydrogen loss occurred, and the only fragmentation channel observed was loss of CO2H, to give a doubly charged carbanion. Our results indicate that protoporphyrin ions are very efficient in accommodating one or even two electrons in the lowest unoccupied molecular orbital of the porphyrin macrocycle, and that electron capture induces only limited dissociation.


Assuntos
Espectrometria de Massas/métodos , Modelos Químicos , Modelos Moleculares , Protoporfirinas/química , Simulação por Computador , Elétrons , Íons , Conformação Molecular/efeitos da radiação , Protoporfirinas/efeitos da radiação
20.
J Chem Phys ; 127(12): 124301, 2007 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-17902897

RESUMO

We have developed an experimental technique that allows us to study the physics of short lived molecular dianions in the gas phase. It is based on the formation of monoanions via electrospray ionization, acceleration of these ions to keV energies, and subsequent electron capture in a sodium vapor cell. The dianions are stored in an electrostatic ion storage ring in which they circulate with revolution times on the order of 100 micros. This enables lifetime studies in a time regime covering five orders of magnitude, 10(-5)-1 s. We have produced dianions of 7,7,8,8-tetracyano-p-quinodimethane and 2,3,5,6-tetrafluoro-7,7,8,8-tetracyano-p-quinodimethane (TCNQ-F(4)) and measured their lifetimes with respect to electron autodetachment. Our data indicate that most of the dianions were initially formed in electronically excited states in the electron transfer process. Two levels of excitation were identified by spectroscopy on the dianion of TCNQ-F(4), and the absorption spectrum was compared with spectra obtained from spectroelectrochemistry of TCNQ-F(4) in acetonitrile solution.

SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA
...