The growing relevance of biological ene reactions.

The ene reaction involves the addition of an 'ene' to an 'enophile.' The retro-ene reaction is the reverse of the ene reaction. In recent years various biological molecules have been found to form covalent intermediates (ene-adducts) that might be the result of an ene reactions. Such adducts have been characterized or implicated for dihydropyridines and pyridininum cofactors derived from vitamin B3, such as the reduced and oxidized forms of nicotinamide adenine dinucleotide (NADH/NAD); flavin cofactors derived from vitamin B2, such as flavin adenine dinucleotide, FAD, and flavin mononucleotide, FMN; vitamin C; the oxime intermediate of nitric oxide synthase; tyrosine; and other biomolecules. Given the ubiquitous nature of these cofactors, it might be speculated that the formation of ene-adducts is a more common principle in biochemistry.

N-Benzylnicotinamide and N-benzyl-1,4-dihydronicotinamide: useful models for NAD+ and NADH.

3-Aminocarbonyl-1-benzylpyridinium bromide (N-benzylnicotinamide, BNA), C13H13N2O+·Br-, (I), and 1-benzyl-1,4-dihydropyridine-3-carboxamide (N-benzyl-1,4-dihydronicotinamide, rBNA), C13H14N2O, (II), are valuable model compounds used to study the enzymatic cofactors NAD(P)+ and NAD(P)H. BNA was crystallized successfully and its structure determined for the first time, while a low-temperature high-resolution structure of rBNA was obtained. Together, these structures provide the most detailed view of the reactive portions of NAD(P)+ and NAD(P)H. The amide group in BNA is rotated 8.4 (4)° out of the plane of the pyridine ring, while the two rings display a dihedral angle of 70.48 (17)°. In the rBNA structure, the dihydropyridine ring is essentially planar, indicating significant delocalization of the formal double bonds, and the amide group is coplanar with the ring [dihedral angle = 4.35 (9)°]. This rBNA conformation may lower the transition-state energy of an ene reaction between a substrate double bond and the dihydropyridine ring. The transition state would involve one atom of the double bond binding to the carbon ortho to both the ring N atom and the amide substituent of the dihydropyridine ring, while the other end of the double bond accepts an H atom from the methylene group para to the N atom.

AFM analysis of C60 and a poly(amido amine) dendrimer-C60 nanoconjugate.

Atomic force microscopy (AFM) was used to study the nanoscopic structure and topography of buckminsterfullerene (C60) and a conjugate of C60 with generation four, amine-terminated, poly(amido amine) dendrimer (PAMAM-G4). The conjugate contains a PAMAM-G4 core and C60 shell formed by reacting PAMAM-G4 with an excess of C60. Fractal patterns of C60 were observed in nanoscopic AFM images when solutions of different concentrations of C60 in pyridine or toluene were dried at room temperature. In contrast, no fractal patterns were detected in the AFM images of the dendrimer-C60 nanoconjugate, prepared from pyridine solution in a similar manner. Thus, the C60-shell alone is not sufficient to impart the same fractal patterns on the conjugate.

Preparation of fullerene-shell dendrimer-core nanoconjugates.

Generation 4 amine-terminated polyamidoamine dendrimer (PAMAM G4) was allowed to react with an excess of buckminsterfullerene (C60) to form a nanoconjugate containing a PAMAM core and C60 shell. The PAMAM-C60 conjugate was characterized by MALDI-TOF, TGA, UV-vis, and IR spectroscopy. Approximately thirty shell fullerenes surround each dendrimer core. The conjugates catalyze photooxidation of thioanisole by generation of singlet oxygen (1O2). The oxidation reactions occur in both organic and aqueous solvents, but the reactivity is enhanced in aqueous solution, possibly due to a nanoreactor effect resulting from diffusion of hydrophobic reactant molecules into dendrimer cavities.

Fullerene-coated beads as reusable catalysts.

New heterogeneous catalysts that use oxygen and light to generate singlet oxygen ((1)O2) have been prepared. The catalysts facilitate various types of singlet oxygenation reactions including the Ene reaction, the Diels-Alder reaction, and others. The catalysts are made by stirring a heterogeneous mixture of fullerene-C(60) (dissolved in toluene) with aminomethylated poly(styrene-co-divinylbenzene) beads. Also, catalysts for aqueous photooxidations are made by reacting the initial catalysts with poly(allylamine) to create an outer layer that is more hydrophilic.

Substituent Effects on the Photocleavage of Benzyl-Sulfur Bonds. Observation of the "Meta Effect"

Benzyl phenyl sulfide has been used to investigate the photocleavage mechanism for benzyl-sulfur bonds. Four experiments have shown that the reaction goes through a radical intermediate. First, the photoproducts observed can all be justified by radical mechanisms. Second, the radical intermediate was trapped with a five hexenyl tether. Third, UV analysis of analogs for the 4-NO(2) derivative indicate no exciplex or electron transfer pathway. Fourth, no strong correlation is observed between sigma values and the quatum yields for loss of substituted benzyl phenyl sulide. The effect of oxygen on quantum yields is best observed after samples are thoroughly outgassed with consecutive freeze-pump-thaw cycles. It is shown that oxygen diminishes the substituent effect. Upon photolysis of the outgassed samples, the meta-substituted derivatives showed more significant variances than the para derivatives. The meta derivatives are most efficiently cleaved in the following order: 3-CN > 3-NO(2) > 3-CF(3) > 3-CH(3) > 3-OCH(3). These findings are justified by an increase in electron density of the radical ipso to the forming benzyl radical for the 3-OCH(3) derivative and a decrease in the electron density of the radical ipso to the forming benzyl radical for the 3-CN derivative.