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1.
Biotechniques ; 34(1): 132-4, 137-41, 2003 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-12545550

RESUMO

A consensus peptide sequence, QSYP, appears as an artifact during the mapping of monoclonal antibodies (MAbs) using a random peptide phage display library. Phage bearing this QSYP sequence were independently selected by four different laboratories screening separate MAb preparations with the same phage library. In each case, the QSYP sequence was selected in addition to a consensus sequence specific to the MAb. Phage that displayed the QSYP sequence were not bound by the MAb of interest, but rather bound to bovine IgG derived from the FBS present in the hybridoma growth media. The implications of this finding for the interpretation of phage library screening results and possible methods for the removal of bovine IgG from MAb preparations are discussed.


Assuntos
Anticorpos Monoclonais/química , Artefatos , Sequência Consenso , Imunoglobulina G/química , Alinhamento de Sequência/métodos , Sequência de Aminoácidos , Animais , Anticorpos Monoclonais/imunologia , Proteínas da Membrana Bacteriana Externa/química , Proteínas da Membrana Bacteriana Externa/imunologia , Bovinos , Mapeamento de Epitopos/métodos , Humanos , Imunoglobulina G/imunologia , Camundongos , Dados de Sequência Molecular , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/imunologia , Biblioteca de Peptídeos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Análise de Sequência de Proteína/métodos
3.
Immunology ; 104(2): 185-97, 2001 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-11683959

RESUMO

The expression of cell-surface antigens can delineate specific leucocyte developmental or functional stages. For example, certain membrane glycoproteins are expressed selectively on leucocyte subsets only after activation. Leucocyte activation can also induce changes in carbohydrate epitopes expressed on surface antigens. In the present studies, we report on a novel monoclonal immunoglobulin M antibody (mAb 13.22) that recognizes a unique carbohydrate epitope expressed on human leucocyte membrane proteins. Characterization of mAb 13.22 specificity by immunoblotting showed that it recognized proteins of MW approximately 95 000 and 150 000, including both CD18 and CD11b. The mAb 13.22 epitope was removed by N-glycosidase F but not by endoglycosidase H or fucosidase, demonstrating that it is an N-linked carbohydrate antigen. Interestingly, immunoblot staining was enhanced after neuraminidase treatment, suggesting that the antibody epitope might also be partially masked by sialic acid. In resting leucocytes, the mAb 13.22 antigen was expressed strongly on neutrophils, while dull staining was present on monocytes, and no lymphocyte staining was observed. In marked contrast, treatment of leucocytes with neuraminidase resulted in exposure of a mAb 13.22 neoepitope on a subset of lymphocytes (primarily T lymphocytes and natural killer cells) as well as up-regulated staining more than 18-fold on monocytes. Activation of lymphocytes in culture with phytohaemagglutinin or concanavalin A also unmasked the mAb 13.22 neoepitope on approximately 37% of the CD45RO+ lymphocytes. Furthermore, analysis of leucocytes collected from the synovial fluid of patients with rheumatoid arthritis showed that approximately 18% of the lymphocytes present expressed the mAb 13.22 neoepitope. Taken together, our results suggest that the mAb 13.22 carbohydrate neoepitope could represent a physiologically relevant marker that is up-regulated on leucocyte subsets during the inflammatory response.


Assuntos
Epitopos/metabolismo , Leucócitos Mononucleares/imunologia , Ativação Linfocitária/imunologia , Regulação para Cima/imunologia , Anticorpos Monoclonais/imunologia , Western Blotting , Carboidratos/imunologia , Técnicas de Cultura de Células , Eletroforese em Gel de Poliacrilamida , Epitopos/efeitos dos fármacos , Humanos , Subpopulações de Linfócitos/imunologia , Neuraminidase/farmacologia , Líquido Sinovial/imunologia , Regulação para Cima/efeitos dos fármacos
4.
J Biol Chem ; 276(42): 38852-61, 2001 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-11504718

RESUMO

A heme-bearing polypeptide core of human neutrophil flavocytochrome b(558) was isolated by applying high performance, size exclusion, liquid chromatography to partially purified Triton X-100-solubilized flavocytochrome b that had been exposed to endoproteinase Glu-C for 1 h. The fragment was composed of two polypeptides of 60-66 and 17 kDa by SDS-polyacrylamide gel electrophoresis and retained a native heme absorbance spectrum that was stable for several days when stored at 4 degrees C in detergent-containing buffer. These properties suggested that the majority of the flavocytochrome b heme environment remained intact. Continued digestion up to 4.5 h yielded several heme-associated fragments that were variable in composition between experiments. Digestion beyond 4.5 h resulted in a gradual loss of recoverable heme. N-Linked deglycosylation and reduction and alkylation of the 1-h digestion fragment did not affect the electrophoretic mobility of the 17-kDa fragment but reduced the 60-66-kDa fragment to 39 kDa. Sequence and immunoblot analyses identified the fragments as the NH(2)-terminal 320-363 amino acid residues of gp91(phox) and the NH(2)-terminal 169-171 amino acid residues of p22(phox). These findings provide direct evidence that the primarily hydrophobic NH(2)-terminal regions of flavocytochrome b are responsible for heme ligation.


Assuntos
Grupo dos Citocromos b/química , Glicoproteínas de Membrana/química , Proteínas de Membrana Transportadoras , NADPH Desidrogenase/química , NADPH Oxidases , Neutrófilos/metabolismo , Fosfoproteínas/química , Aminoácidos/química , Membrana Celular/metabolismo , Cromatografia Líquida de Alta Pressão , Detergentes/farmacologia , Eletroforese em Gel de Poliacrilamida , Glicosilação , Heme/análise , Heme/química , Humanos , Immunoblotting , NADPH Oxidase 2 , Octoxinol/farmacologia , Ligação Proteica , Estrutura Terciária de Proteína , Coloração pela Prata , Fatores de Tempo
5.
J Biol Chem ; 276(3): 2053-61, 2001 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-11027685

RESUMO

Despite extensive experimental and clinical evidence demonstrating the critical role of flavocytochrome b558 (Cyt b) in the NADPH-dependent oxidase, there is a paucity of direct structural data defining its topology in the phagocyte membrane. Unlike other Cyt b-specific monoclonal antibodies, 7D5 binds exclusively to an extracellular domain, and identification of its epitope should provide novel insight into the membrane topology of Cyt b. To that end, we examined biochemical features of 7D5-Cyt b binding and used the J404 phage display nonapeptide library to identify the bound epitope. 7D5 precipitated only heterodimeric gp91-p22phox and not individual or denatured Cyt b subunits from detergent extracts of human neutrophils and promyelocytic leukemia cells (gp91-PLB). Moreover, 7D5 precipitated precursor gp65-p22phox complexes from detergent extracts of the biosynthetically active gp91-PLB cells, demonstrating that complex carbohydrates were not required for epitope recognition. Epitope mimetics selected from the J404 phage display library by 7D5 demonstrated that (226)RIVRG(230) and (160)IKNP(163) regions of gp91phox were both bound by 7D5. These studies reveal specific information about Cyt b membrane topology and structure, namely that gp91phox residues (226)RIVRG(230) and (160)IKNP(163) are closely juxtaposed on extracytoplasmic domains and that predicted helices containing residues Gly(165)-Ile(190) and Ser(200)-Glu(225) are adjacent to each other in the membrane.


Assuntos
Bacteriófagos/genética , Grupo dos Citocromos b/química , Mapeamento de Epitopos , NADPH Oxidases , Neutrófilos/enzimologia , Sequência de Aminoácidos , Anticorpos Monoclonais/imunologia , Grupo dos Citocromos b/genética , Grupo dos Citocromos b/imunologia , Dimerização , Ensaio de Imunoadsorção Enzimática , Humanos , Testes de Precipitina
6.
J Biol Chem ; 276(5): 3090-7, 2001 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-11060300

RESUMO

The enzyme NADPH oxidase is regulated by phospholipase D in intact neutrophils and is activated by phosphatidic acid (PA) plus diacylglycerol (DG) in cell-free systems. We showed previously that cell-free NADPH oxidase activation by these lipids involves both protein kinase-dependent and -independent pathways. Here we demonstrate that only the protein kinase-independent pathway is operative in a cell-free system of purified and recombinant NADPH oxidase components. Activation by PA + DG was ATP-independent and unaffected by the protein kinase inhibitor staurosporine, indicating the lack of protein kinase involvement. Both PA and DG were required for optimal activation to occur. The drug reduced activation of NADPH oxidase by either arachidonic acid or PA + DG, with IC(50) values of 46 and 25 microm, respectively. The optimal concentration of arachidonic acid or PA + DG for oxidase activation was shifted to the right with, indicating interference of the drug with the interaction of lipid activators and enzyme components. inhibited the lipid-induced aggregation/sedimentation of oxidase components p47(phox) and p67(phox), suggesting a disruption of the lipid-mediated assembly process. The direct effects of on NADPH oxidase activation complicate its use as a "specific" inhibitor of DG kinase. We conclude that the protein kinase-independent pathway of NADPH oxidase activation by PA and DG involves direct interaction with NADPH oxidase components. Thus, NADPH oxidase proteins are functional targets for these lipid messengers in the neutrophil.


Assuntos
Diglicerídeos/farmacologia , NADPH Oxidases/metabolismo , Ácidos Fosfatídicos/farmacologia , Sistema Livre de Células , Ativação Enzimática/efeitos dos fármacos , Humanos , Técnicas In Vitro , NADPH Oxidases/efeitos dos fármacos , Neutrófilos/enzimologia , Neutrófilos/metabolismo , Fosfoproteínas/química , Piperidinas/farmacologia , Quinazolinas/farmacologia , Quinazolinonas , Proteínas Recombinantes/química
7.
Biochem J ; 352 Pt 2: 399-407, 2000 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-11085933

RESUMO

The formyl peptide receptor (FPR) is a G-protein-coupled receptor (GPCR) that mediates chemotaxis and stimulates the mitogen-activated protein kinase (MAPK)/extracellular-signal-regulated kinase pathway. We have examined the functional effects of substitutions of a conserved aspartic acid residue in the second transmembrane domain (D71A) and of residues in the conserved NPXXY motif in the seventh transmembrane domain (N297A and Y301A). These mutated receptors, expressed in Chinese hamster ovary (CHO) cells, bind ligand with affinities similar to wild-type FPR, but the D71A mutant is uncoupled from G-protein [Miettinen, Mills, Gripentrog, Dratz, Granger and Jesaitis (1997) J. Immunol 159, 4045-4054]. In the present study, we show that both the D71A and N297A mutations resulted in defective endocytosis. The N297A substitution also prevented desensitization, as determined by intracellular calcium mobilization by sequential stimulation with ligand. In chemotaxis assays, the N297A mutation resulted in cell migration towards gradients of up to 100 nM N-formyl-methionyl-leucyl-phenylalanine (fMLF), whereas cells expressing the wild-type FPR and the Y301A mutant were no longer chemotactically responsive at 10-100 nM fMLF. Maximal activation of p42/44 MAPK occurred in CHO cells expressing wild-type FPR at 10 nM-100 nM fMLF, whereas cells expressing the N297A mutant showed a dose-dependent increase in the amount of phosphorylated p42/44 MAPK up to 1-10 microM fMLF. Since the MAPK kinase inhibitor PD98059 blocked fMLF-induced chemotaxis, our results suggest that the dose-dependent increase in p42/44 MAPK activation may correlate with the increased chemotactic migration of N297A transfectants at 10 nM-100 nM fMLF.


Assuntos
Quimiotaxia , Endocitose , Proteína Quinase 1 Ativada por Mitógeno/metabolismo , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Receptores Imunológicos/metabolismo , Receptores de Peptídeos/metabolismo , Substituição de Aminoácidos , Animais , Células CHO , Cricetinae , Ativação Enzimática , Humanos , Ligantes , Microscopia de Fluorescência , Proteína Quinase 3 Ativada por Mitógeno , Fosforilação , Receptores de Formil Peptídeo , Receptores Imunológicos/antagonistas & inibidores , Receptores Imunológicos/química , Receptores de Peptídeos/antagonistas & inibidores , Receptores de Peptídeos/química
8.
J Biol Chem ; 275(50): 39012-7, 2000 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-10960471

RESUMO

The formyl peptide receptor (FPR) is a chemotactic G protein-coupled receptor found on the surface of phagocytes. We have previously shown that the formyl peptide binding site maps to the membrane-spanning region (Miettinen, H. M., Mills, J. S., Gripentrog, J. M., Dratz, E. A., Granger, B. L., and Jesaitis, A. J. (1997) J. Immunol. 159, 4045-4054). Recent reports have indicated that non-formylated peptides, such as MMWLL can also activate this receptor (Chen, J., Bernstein, H. S., Chen, M., Wang, L., Ishi, M., Turck, C. W., and Coughlin, S. R. (1995) J. Biol. Chem. 270, 23398-23401.) Here we show that the selectivity for the binding of different NH(2)-terminal analogs of MMWLL or MLF can be markedly altered by mutating Asp-106 to asparagine or Arg-201 to alanine. Both D106N and R201A produced a similar change in ligand specificity, including an enhanced ability to bind the HIV-1 peptide DP178. In contrast, the mutation R205A exhibited altered specificity at the COOH terminus of fMLF, with R205A binding fMLF-O-butyl > fMLF-O-methyl > fMLF, whereas wt FPR bound fMLF > fMLF-O-methyl approximately fMLF-O-butyl. These data, taken together with our previous finding that the leucine side chain of fMLF is probably bound to FPR near FPR (93)VRK(95) (Mills, J. S., Miettinen, H. M., Barnidge, D., Vlases, M. J., Wimer-Mackin, S., Dratz, E. A., and Jesaitis, A. J. (1998) J. Biol. Chem. 273, 10428-10435.), indicate that the most likely positioning of fMLF in the binding pocket of FPR is approximately parallel to the fifth transmembrane helix with the formamide group of fMLF hydrogen-bonded to both Asp-106 and Arg-201, the leucine side chain pointing toward the second transmembrane region, and the COOH-terminal carboxyl group of fMLF ion-paired with Arg-205.


Assuntos
Receptores Imunológicos/química , Receptores de Peptídeos/química , Alanina/química , Animais , Fármacos Anti-HIV/farmacologia , Arginina/química , Asparagina/química , Ácido Aspártico/química , Sítios de Ligação , Células CHO , Quimiotaxia/efeitos dos fármacos , Cricetinae , Relação Dose-Resposta a Droga , Enfuvirtida , Guanosina 5'-O-(3-Tiotrifosfato)/metabolismo , Proteína gp41 do Envelope de HIV/farmacologia , Humanos , Cinética , Leucina/química , Ligantes , Metionina/química , Modelos Químicos , Mutagênese Sítio-Dirigida , Mutação , Biossíntese Peptídica , Fragmentos de Peptídeos/farmacologia , Fenilalanina/química , Ligação Proteica , Receptores de Formil Peptídeo , Receptores Imunológicos/metabolismo , Receptores de Peptídeos/metabolismo , Sódio/farmacologia , Triptofano/química
9.
J Biol Chem ; 275(37): 28406-12, 2000 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-10893420

RESUMO

Human neutrophils participate in the host innate immune response, partly mediated by the multicomponent superoxide-generating enzyme NADPH oxidase. A correlation between phosphorylation of cytosolic NADPH oxidase components and enzyme activation has been identified but is not well understood. We previously showed that p22(phox), the small subunit of the membrane-bound oxidase component flavocytochrome b(558), is an in vitro substrate for both a phosphatidic acid-activated kinase and conventional protein kinase C isoforms (Regier, D. S., Waite, K. A., Wallin, R., and McPhail, L. C. (1999) J. Biol. Chem. 274, 36601-36608). Here we show that several neutrophil agonists (phorbol myristate acetate, opsonized zymosan, and N-formyl-methionyl-leucyl-phenylalanine) induce p22(phox) phosphorylation in intact neutrophils. To determine if phospholipase D (PLD) is needed for p22(phox) phosphorylation, cells were pretreated with ethanol, which reduces phosphatidic acid production by PLD in stimulated cells. Phorbol myristate acetate-induced phosphorylation of p22(phox) and NADPH oxidase activity were not reduced by ethanol. In contrast, ethanol reduced both activities when cells were stimulated by N-formyl-methionyl-leucyl-phenylalanine or opsonized zymosan. Varying the time of stimulation with opsonized zymosan showed that the phosphorylation of p22(phox) coincides with NADPH oxidase activation. GF109203X, an inhibitor of protein kinase C and the phosphatidic acid-activated protein kinase, decreased both p22(phox) phosphorylation and NADPH oxidase activity in parallel in opsonized zymosan-stimulated cells. Stimulus-induced phosphorylation of p22(phox) was on Thr residue(s), in agreement with in vitro results. Overall, these data show that NADPH oxidase activity and p22(phox) phosphorylation are correlated and suggest two mechanisms (PLD-dependent and -independent) by which p22(phox) phosphorylation occurs.


Assuntos
Proteínas de Membrana Transportadoras , NADPH Desidrogenase/metabolismo , NADPH Oxidases/metabolismo , Fosfolipase D/fisiologia , Fosfoproteínas/metabolismo , Adulto , Ativação Enzimática , Humanos , Fosforilação , Proteína Quinase C/fisiologia
10.
J Biol Chem ; 275(18): 13986-93, 2000 May 05.
Artigo em Inglês | MEDLINE | ID: mdl-10788525

RESUMO

The phagocyte NADPH-dependent oxidase generates superoxide by reducing molecular oxygen through a transmembrane heterodimer known as flavocytochrome b(558) (flavocytochrome b). We investigated the biosynthesis of flavocytochrome b subunits gp91(phox) and p22(phox) to elucidate features of flavocytochrome b processing in myeloid cells. Although the gp91(phox) precursor, gp65, was processed to gp91(phox) within 4-8 h of chase, unassembled gp65 and p22(phox) monomers were degraded by the cytosolic proteasome. gp65 associated with p22(phox) post-translationally, within 1-4 h of chase, but prior to its modification in the Golgi complex. Moreover, p22(phox) coprecipitated with unglycosylated gp91(phox) primary translation product made in the presence of tunicamycin, suggesting that heterodimer formation does not require glycosylation. Blocking heme synthesis with succinyl acetone completely inhibited heterodimer formation, although biogenesis of gp65 and p22(phox) was unaffected. In succinyl acetone-treated cells, p22(phox) and gp65 were degraded completely by 8 h of chase, a process mediated by the cytosolic proteasome. Taken together, these data suggest that the formation of the gp65-p22(phox) heterodimer is relatively inefficient and that acquisition of heme by gp65 precedes and is required for its association with p22(phox), a process that requires neither the addition of N-linked oligosaccharides nor modification in the Golgi complex.


Assuntos
Grupo dos Citocromos b/metabolismo , NADPH Oxidases , Processamento de Proteína Pós-Traducional , Grupo dos Citocromos b/química , Dimerização , Heme/química , Staphylococcus aureus
11.
Eur J Haematol ; 65(6): 407-13, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11168498

RESUMO

Flavocytochrome b558 (Cyt b) is important in generating superoxide and other toxic oxygen species involved in inflammation and host defense. Monoclonal antibodies (mAbs) 48 and 449 bind the gp91Phox and p22phox subunits of Cyt b, respectively, and have been used to characterize this enzyme complex. Until now, data were unavailable to predict which regions of the protein were bound by each antibody. Random sequence phage-display peptide library analysis of each antibody was used to select peptides that mimic the sequence of each protein epitope. Phage sequences selected by mAb 48 presented the consensus peptide sequence, DRDVXTGL, which closely resembles 498EKDVITGL505 of gp91Phox. Phage selected by mAb 449 contributed the consensus WRWPGPQVL, resembling in part 182GPQV185 of p22phox. Confirmation for this second epitope was provided by peptide walking analysis. Identifying the protein residues bound by these antibodies makes each a more informative probe for Cyt b analysis.


Assuntos
Grupo dos Citocromos b/imunologia , Epitopos/química , Proteínas de Membrana Transportadoras , NADPH Oxidases , Neutrófilos/química , Sequência de Aminoácidos , Anticorpos Monoclonais/imunologia , Sequência Consenso , Grupo dos Citocromos b/química , Mapeamento de Epitopos , Epitopos/sangue , Humanos , Glicoproteínas de Membrana/química , Glicoproteínas de Membrana/imunologia , Modelos Moleculares , Dados de Sequência Molecular , NADPH Desidrogenase/química , NADPH Desidrogenase/imunologia , NADPH Oxidase 2 , Biblioteca de Peptídeos , Fosfoproteínas/química , Fosfoproteínas/imunologia , Conformação Proteica , Subunidades Proteicas
12.
J Biol Chem ; 274(39): 27934-42, 1999 Sep 24.
Artigo em Inglês | MEDLINE | ID: mdl-10488141

RESUMO

Wild-type and 35 mutant formyl peptide receptors (FPRs) were stably expressed in Chinese hamster ovary cells. All cell surface-expressed mutant receptors bound N-formyl peptide with similar affinities as wild-type FPR, suggesting that the mutations did not affect the ligand-binding site. G protein coupling was examined by quantitative analysis of N-formyl-methionyl-leucyl-phenylalanine-induced increase in binding of (35)S-labeled guanosine 5'-3-O-(thio)triphosphate (GTPgammaS) to membranes. The most prominent uncoupled FPR mutants were located in the N-terminal part of the second transmembrane domain (S63W and D71A) and the C-terminal interface of the third transmembrane domain (R123A and C124S/C126S). In addition, less pronounced uncoupling was detected with deletion mutations in the third cytoplasmic loop and in the cytoplasmic tail. Further analysis of some of the mutants that were judged to be uncoupled based on the [(35)S]GTPgammaS membrane-binding assay were found to transduce a signal, as evidenced by intracellular calcium mobilization and activation of p42/44 MAPK. Thus, these single point mutations in FPR did not completely abolish the interaction with G protein, emphasizing that the coupling site is coordinated by several different regions of the receptor. Mutations located in the putative fifth and sixth transmembrane domains near the N- and C-terminal parts of the third cytoplasmic loop did not result in uncoupling. These regions have previously been shown to be critical for G protein coupling to many other G protein-coupled receptors. Thus, FPR appears to have a G protein-interacting site distinct from the adrenergic receptors, the muscarinic receptors, and the angiotensin receptors.


Assuntos
Proteínas de Ligação ao GTP/química , Proteínas de Ligação ao GTP/metabolismo , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Receptores Imunológicos/química , Receptores Imunológicos/metabolismo , Receptores de Peptídeos/química , Receptores de Peptídeos/metabolismo , Sequência de Aminoácidos , Substituição de Aminoácidos , Androstadienos/farmacologia , Animais , Células CHO , Membrana Celular/metabolismo , Membrana Celular/ultraestrutura , Cricetinae , Citoplasma/metabolismo , Ativação Enzimática , Inibidores Enzimáticos/farmacologia , Guanosina 5'-O-(3-Tiotrifosfato)/metabolismo , Humanos , Proteína Quinase 1 Ativada por Mitógeno/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , N-Formilmetionina Leucil-Fenilalanina/farmacologia , Estrutura Secundária de Proteína , Receptores de Formil Peptídeo , Receptores Imunológicos/genética , Receptores de Peptídeos/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Transfecção , Fatores de Virulência de Bordetella/farmacologia , Wortmanina
13.
Protein Sci ; 8(4): 760-70, 1999 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10211822

RESUMO

Phage-display peptide library analysis of an anti-F actin polyclonal antibody identified 12 amino acid residues of actin that appear, in its X-ray crystal structure, to be grouped together in a surface accessible conformational epitope. Phage epitope mapping was carried out by isolating immune complexes containing members of the J404 nonapeptide phage-display library formed in diluted antiserum and isolated on a protein A affinity matrix. Immunoreactive clones were grown as plaques, replica plated onto nitrocellulose, and labeled with anti-actin immune serum. One hundred and forty-four positively staining clones identified in this way were sequenced. Of these, 54 displayed peptides with sequence similarities. When the most abundantly selected sequence, KQTWQQLWD, was produced as a synthetic peptide and derivatized to ovalbumin, the complex was strongly recognized by the antiserum on Western blots and inhibited the binding of the antibody to immobilized F-actin by 60%. A scrambled version of this sequence WQDK WLQTQ, when coupled to ovalbumin, was not recognized by the antiserum and minimally inhibited binding of antiserum to immobilized F-actin by 10%. KQTWQQLWD contained four residues that corresponded, in frame, to a highly conserved six residue region of the chicken beta-actin sequence 351TFQQMW356 (identical residues are shown in bold). Examination of the rabbit skeletal muscle X-ray crystal structure suggested that within a 15 A radius of W356, nine additional residues were arranged on the actin surface in such a way that they could be mimicked by several of the selected phage sequences with root-mean-square deviation fits of 2.1-2.5 A. We conclude that phage-display analysis can provide information about the relative location of amino acids on the surfaces of proteins using antibody imprints of the protein surface structure.


Assuntos
Actinas/química , Mapeamento de Epitopos/métodos , Actinas/imunologia , Anticorpos/análise , Western Blotting , Simulação por Computador , Modelos Moleculares , Ovalbumina/metabolismo , Biblioteca de Peptídeos , Conformação Proteica , Homologia de Sequência de Aminoácidos
14.
Anal Biochem ; 269(1): 1-9, 1999 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-10094768

RESUMO

The analysis of integral membrane proteins or transmembrane peptides by electrospray ionization mass spectrometry (ESI-MS) is difficult since detergents, used to solubilize these hydrophobic proteins and peptides, severely suppress analyte ion formation. This problem has been addressed previously by precipitating the protein, removing the detergent, and resolubilizing the protein in a nonpolar solvent. Here, we demonstrate a method that avoids protein precipitation and resolubilization. Detergent-solubilized bacteriorhodopsin is extracted into a nonpolar solvent phase by adding a chloroform/methanol/water solvent mixture to the aqueous detergent solution. ESI mass spectra of the nonpolar, chloroform-rich phase were dominated by peaks due to bacterioopsin. Bacterioopsin precursors with partially cleaved leader sequences were seen in all mass spectra. Additional peaks were likely due to intact bacteriorhodopsin, i.e., bacterioopsin with the retinal prosthetic group attached, and to bacterioopsin associated with lipid molecules. A separation process that occurred in the fused-silica capillary leading to the electrospray tip was essential for obtaining ESI mass spectra of bacterioopsin. The extraction-into-chloroform procedure also worked well with hydrophobic, transmembrane-type peptides that were insoluble in other electrospray solvents, including 100% formic acid, and the method has application to transmembrane peptides formed from digests of integral membrane proteins.


Assuntos
Bacteriorodopsinas/análise , Espectrometria de Massas/métodos , Peptídeos/análise , Bacteriorodopsinas/química , Extratos Celulares/química , Detergentes/química , Halobacterium salinarum/metabolismo , Proteínas de Membrana/análise , Peptídeos/química , Solubilidade , Soluções
15.
Infect Immun ; 67(3): 1063-71, 1999 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-10024544

RESUMO

Serum-free culture filtrates of six Candida species and Saccharomyces cerevisiae were found to contain chemoattractants for human polymorphonuclear leukocytes (PMNs) and a mouse macrophage-like cell line, J774. The chemotactic factors differed for the PMN and J774 cells, however, in terms of heat stability, kinetics of liberation by the yeast cells, and divalent cation requirements for production. The chemoattractant in Candida albicans culture filtrates appeared to act through the formyl peptide receptor (FPR) of PMNs, since it was found to induce chemotaxis of Chinese hamster ovary (CHO) cells that were expressing the human FPR but did not induce chemotaxis of wild-type CHO cells. The C. albicans culture filtrates also induced migration of PMNs across confluent monolayers of a human gastrointestinal epithelial cell line, T84; migration occurred in the basolateral-to-apical direction but not the reverse direction, unless the epithelial tight junctions were disrupted. J774 cells did not migrate toward the formylated peptide (fMet-Leu-Phe; fMLF), and chemotaxis toward the C. albicans culture filtrate was not inhibited by an FPR antagonist (t-butoxycarbonyl-Met-Leu-Phe), suggesting that a different receptor mediated J774 cell chemotaxis. In conclusion, we have identified a receptor by which a non-serum-dependent chemotactic factor (NSCF) produced by C. albicans induced chemotaxis of PMNs. Additionally, we have shown that NSCF was active across epithelial monolayers. These findings suggest that NSCFs produced by C. albicans and other yeast species may influence host-pathogen interactions at the gastrointestinal tract mucosal surface by inducing phagocytic-cell infiltration.


Assuntos
Candida albicans/imunologia , Fatores Quimiotáticos/fisiologia , Quimiotaxia de Leucócito , Macrófagos/fisiologia , Neutrófilos/imunologia , Receptores Imunológicos/fisiologia , Receptores de Peptídeos/fisiologia , Animais , Células CHO , Linhagem Celular , Movimento Celular , Cricetinae , Humanos , Camundongos , Neutrófilos/fisiologia , Receptores de Formil Peptídeo
16.
Blood ; 93(5): 1738-48, 1999 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-10029604

RESUMO

Analysis of peptide binding to human neutrophils (PMN) using phage display techniques has revealed cell-specific motifs reactive with the PMN surface. Phage libraries displaying either linear 9-mer or cyclic 10-mer and 6-mer peptides were incubated with normal human neutrophils followed by elution of bound phage with low pH (pH 2.2) and non-ionic detergent. Three rounds of selection generated several related peptide sequences that bound with high avidity to PMN. Using the linear 9-mer library, PMN-binding phage expressed peptides with the motif (G/A)PNLTGRW. The binding of phage bearing this motif was highly specific since no binding was observed on lymphocytes, fibroblasts, epithelial, or endothelial cells. Functional assays revealed that phage bearing the sequence FGPNLTGRW induced a pertussis toxin-sensitive increase in PMN cytosolic calcium analogous to that observed with Galphai coupled receptors. Other prominent motifs identified included phage bearing the consensus DLXTSK(M/L)X(V/I/L), where X represents a non-conserved position. Phage with this motif bound exclusively to a sub population of human PMN that comprised approximately 50% of the total and did not elicit a calcium response. The binding of such phage to PMN was prevented by co-incubation with competing peptides displaying identical or similar sequences (IC50 range from 0.6 micromol/L to 50 micromol/L for DLXTSK and GPNLTG, respectively). We speculate that these techniques will be useful in identifying functional cell-specific binding motifs and contribute to the development of new therapeutic and diagnostic strategies in human disease.


Assuntos
Neutrófilos/metabolismo , Peptídeos/metabolismo , Sequência de Aminoácidos , Bacteriófagos , Cálcio/metabolismo , Humanos , Dados de Sequência Molecular , Biblioteca de Peptídeos , Peptídeos/genética , Ligação Proteica , Análise de Sequência
17.
J Biol Chem ; 273(38): 24847-52, 1998 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-9733789

RESUMO

Structural features of the integral membrane protein flavocytochrome b (Cyt b) were discovered using an antibody "imprint" of the Cyt b surface. Amino acid sequences were selected from a random nonapeptide phage-display library by their affinity for the monoclonal antibody 44.1 binding site, which recognizes the native conformation of the p22 subunit of Cyt b. Transferred nuclear Overhauser effect spectroscopy and rotating frame Overhauser effect spectroscopy NMR were used to study the antibody-bound conformation of a synthetic peptide derived from phage-displayed sequences. The NMR data supported the phage-display analysis suggesting the existence of a complex epitope and allowed the modeling of the close spatial proximity of the epitope components 29TAGRF33 and 183PQVNPI188 from discontinuous regions of p22. Although these regions are separated by two putative membrane-spanning domains and are 150 residues apart in the sequence, they appear to combine to form a complex epitope on the cytosolic surface of the transmembrane protein. NMR constraints, measured from the antibody-bound conformation of a composite peptide mimetic of the Cyt b epitope, and one constraint inferred from the phage-display results, were used to demonstrate the close proximity of these two regions. This information provides a low resolution view of the tertiary structure of the native discontinuous epitope on the Cyt b surface. Given additional antibodies, such imprint analysis has the potential for producing structural constraints to help support molecular modeling of this and other low abundance or noncrystallizable proteins.


Assuntos
Anticorpos Monoclonais , Grupo dos Citocromos b/química , Grupo dos Citocromos b/imunologia , Proteínas de Membrana/química , Biblioteca de Peptídeos , Conformação Proteica , Dobramento de Proteína , Sequência de Aminoácidos , Reações Antígeno-Anticorpo , Sequência de Bases , Sítios de Ligação de Anticorpos , Membrana Celular/química , Membrana Celular/ultraestrutura , Ensaio de Imunoadsorção Enzimática , Epitopos/química , Humanos , Proteínas de Membrana/imunologia , Modelos Moleculares , Dados de Sequência Molecular , Neutrófilos/química , Ressonância Magnética Nuclear Biomolecular , Oligodesoxirribonucleotídeos , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo
18.
Arch Biochem Biophys ; 357(1): 164-72, 1998 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-9721196

RESUMO

A monoclonal IgM, specifically recognizing both CD11b and CD18 of human neutrophils, was used to examine the organization and mobility of CD11b/CD18 in the plasma membrane of human neutrophils degranulated by dihydrocytochalasin B (dhCB) treatment and fMet-Leu-Phe (fMLF) stimulation. Subcellular fractionation analysis of untreated or dhCB-treated control neutrophils indicated that 20% of CD11b/CD18 cosedimented with plasma membrane and the remainder with specific granules. In contrast, fMLF stimulation of dhCB-treated cells caused a major reorganization of CD11b/CD18, in which 60-70% of CD11b/CD18 sedimented in dense plasma membrane fractions that were also enriched in superoxide-generating NADPH oxidase activity. Similarly pretreated neutrophils were fixed, immunogold labeled, and examined by scanning electron microscopy. Immunogold particles were distributed uniformly over the symmetrically ruffled surface of unstimulated neutrophils. On dhCB-treated cells, immunogold was mostly uniformly distributed on a smooth membrane with a small percentage of particles lining up into linear arrays. After fMLF + dhCB stimulation, CD11b/CD18 gold label was more abundant on the cell surface and formed large aggregates on polarized membrane protrusions. However, when cells were adhered to an albumin-coated quartz surface and stimulated with fMLF in the presence of dhCB, immunogold was excluded on the articulated and rounded cell body but concentrated on the periphery of adherent lamellae. Fluorescence photobleaching recovery indicated that in unstimulated cells 38 +/- 3% of CD11b/CD18 was mobile (R) with a diffusion constant D of 3.1 +/- 0.3 x 10(-10) cm2/s. Treatment with dhCB raised R and D 24 and 74%, respectively. Stimulation using 1 microM fMLF with dhCB lowered D and R to near control levels. Since NADPH oxidase and CD11b/CD18 cosediment in high-density plasma membrane domains after fMLF + dhCB stimulation, we speculate that a stimulus-induced reorganization of CD11b/CD18 and NADPH oxidase to common membrane domains may occur in fMLF + dhCB-degranulated neutrophils.


Assuntos
Antígenos CD18/metabolismo , Degranulação Celular/efeitos dos fármacos , Antígeno de Macrófago 1/metabolismo , Neutrófilos/imunologia , Neutrófilos/metabolismo , Superóxidos/farmacologia , Adesão Celular , Membrana Celular/imunologia , Membrana Celular/metabolismo , Membrana Celular/ultraestrutura , Células Cultivadas , Humanos , Microscopia Eletrônica de Varredura , Neutrófilos/ultraestrutura , Frações Subcelulares/imunologia , Frações Subcelulares/metabolismo , Especificidade por Substrato
19.
J Cell Sci ; 111 ( Pt 14): 1921-8, 1998 Jul 30.
Artigo em Inglês | MEDLINE | ID: mdl-9645940

RESUMO

Activation of the N-formyl peptide receptor (FPR) of human neutrophils by ligands such as N-formyl-methionine-leucine-phenylalanine (fMLP) induces mobilization of intracellular calcium, cell adhesion, chemotaxis, superoxide production and degranulation. Chinese hamster ovary (CHO) cells are normally devoid of FPR and unresponsive to fMLP, but when stably transfected with a human FPR cDNA, exhibited some of these same responses. Specifically, stimulation with fMLP resulted in release of intracellular calcium and chemotactic migration toward a gradient of fMLP. As in neutrophils, both processes were inhibited through receptor desensitization by prior exposure to a higher or equal concentration of ligand or by treatment with pertussis toxin. Soluble and membrane-bound fibronectin greatly increased fMLP-induced chemotaxis of CHO cells expressing FPR, but not of wild-type CHO cells, suggesting a role for FPR in activation of integrin function. Evidence for this hypothesis was obtained by demonstrating that CHO cells expressing FPR rapidly increased their adhesion to a fibronectin-coated surface after stimulation with fMLP. Both chemotaxis and adhesion were largely inhibited by RGDS peptide and a function-blocking antibody against alpha5 integrin. FPR-mediated chemotaxis of the CHO transfectants was partly inhibited by a tyrosine kinase inhibitor, herbimycin A, and blocked by a phosphoinositide 3-kinase inhibitor, wortmannin. These data suggest that stimulation of CHO FPR transfectants with a gradient of fMLP results in phosphoinositide 3-kinase-dependent chemotactic migration, which is enhanced by binding of activated alpha5beta1 to fibronectin. This non-myeloid, non-lymphoid fibroblastic cell line will thus serve as a useful model to investigate additional requirements of signal transduction molecules, adhesion molecules and cytoskeletal elements in FPR-mediated chemotaxis.


Assuntos
Quimiotaxia , N-Formilmetionina Leucil-Fenilalanina/farmacologia , Receptores de Fibronectina/fisiologia , Receptores Imunológicos/fisiologia , Receptores de Peptídeos/fisiologia , Animais , Células CHO , Cálcio/metabolismo , Adesão Celular , Quimiotaxia/efeitos dos fármacos , Cricetinae , Fibronectinas/metabolismo , Fibronectinas/farmacologia , Humanos , Neutrófilos/fisiologia , Oligopeptídeos , Fosfatidilinositol 3-Quinases/metabolismo , Receptores de Formil Peptídeo , Receptores Imunológicos/biossíntese , Receptores de Peptídeos/biossíntese , Proteínas Recombinantes/biossíntese , Transdução de Sinais , Transfecção
20.
J Biol Chem ; 273(17): 10428-35, 1998 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-9553101

RESUMO

A novel fluorescent photoaffinity cross-linking probe, formyl-Met-p-benzoyl-L-phenylalanine-Phe-Tyr-Lys-epsilon-N-fluorescei n (fMBpaFYK-fl), was synthesized and used to identify binding site residues in recombinant human phagocyte chemoattractant formyl peptide receptor (FPR). After photoactivation, fluorescein-labeled membranes from Chinese hamster ovary cells were solubilized in octylglucoside and separated by tandem anion exchange and gel filtration chromatography. A single peak of fluorescence was observed in extracts of FPR-expressing cells that was absent in extracts from wild type controls. Photolabeled Chinese hamster ovary membranes were cleaved with CNBr, and the fluorescent fragments were isolated on an antifluorescein immunoaffinity matrix. Matrix-assisted laser desorption ionization mass spectrometry identified a major species with mass = 1754, consistent with the CNBr fragment of fMBpaFYK-fl cross-linked to Val-Arg-Lys-Ala-Hse (an expected CNBr fragment of FPR, residues 83-87). This peptide was further cleaved with trypsin, repurified by antifluorescein immunoaffinity, and subjected to matrix-assisted laser desorption ionization mass spectrometry. A tryptic fragment with mass = 1582 was observed, which is the mass of fMBpaFYK-fl cross-linked to Val-Arg-Lys (FPR residues 83-85), an expected trypsin cleavage product of Val-Arg-Lys-Ala-Hse. Residues 83-85 lie within the putative second transmembrane-spanning region of FPR near the extracellular surface. A 3D model of FPR is presented, which accounts for intramembrane, site-directed mutagenesis results (Miettinen, H. M., Mills, J., Gripentrog, J., Dratz, E. A., Granger, B. L., and Jesaitis, A. J. (1997) J. Immunol. 159, 4045-4054) and the photochemical cross-linking data.


Assuntos
N-Formilmetionina Leucil-Fenilalanina/metabolismo , Neutrófilos/metabolismo , Receptores Imunológicos/metabolismo , Receptores de Peptídeos/metabolismo , Marcadores de Afinidade , Sequência de Aminoácidos , Animais , Sítios de Ligação , Células CHO , Membrana Celular/metabolismo , Cricetinae , Corantes Fluorescentes , Humanos , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Receptores de Formil Peptídeo , Receptores Imunológicos/química , Receptores Imunológicos/genética , Receptores de Peptídeos/química , Receptores de Peptídeos/genética , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
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