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1.
Sci Rep ; 10(1): 9002, 2020 06 02.
Artigo em Inglês | MEDLINE | ID: mdl-32488093

RESUMO

ToxR is a transmembrane transcription factor that, together with its integral membrane periplasmic binding partner ToxS, is conserved across the Vibrionaceae family. In some pathogenic Vibrios, including V. parahaemolyticus and V. cholerae, ToxR is required for bile resistance and virulence, and ToxR is fully activated and protected from degradation by ToxS. ToxS achieves this in part by ensuring formation of an intra-chain disulfide bond in the C-terminal periplasmic domain of ToxR (dbToxRp). In this study, biochemical analysis showed dbToxRp to have a higher affinity for the ToxS periplasmic domain than the non-disulfide bonded conformation. Analysis of our dbToxRp crystal structure showed this is due to disulfide bond stabilization. Furthermore, dbToxRp is structurally homologous to the V. parahaemolyticus VtrA periplasmic domain. These results highlight the critical structural role of disulfide bond in ToxR and along with VtrA define a domain fold involved in environmental sensing conserved across the Vibrionaceae family.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Ácidos e Sais Biliares/metabolismo , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/metabolismo , Dissulfetos/química , Proteínas de Membrana/metabolismo , Fatores de Transcrição/química , Fatores de Transcrição/metabolismo , Proteínas de Bactérias/genética , Varredura Diferencial de Calorimetria , Cristalografia por Raios X , Proteínas de Ligação a DNA/genética , Proteínas de Membrana/química , Modelos Moleculares , Periplasma/química , Periplasma/metabolismo , Domínios Proteicos , Multimerização Proteica , Fatores de Transcrição/genética
2.
Biophys J ; 101(11): 2760-9, 2011 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-22261065

RESUMO

Eg5 is a homotetrameric kinesin-5 motor protein that generates outward force on the overlapping, antiparallel microtubules (MTs) of the mitotic spindle. Upon binding an MT, an Eg5 dimer releases one ADP molecule, undergoes a slow (∼0.5 s(-1)) isomerization, and finally releases a second ADP, adopting a tightly MT-bound, nucleotide-free (APO) conformation. This conformation precedes ATP binding and stepping. Here, we use mutagenesis, steady-state and pre-steady-state kinetics, motility assays, and electron paramagnetic resonance spectroscopy to examine Eg5 monomers and dimers as they bind MTs and initiate stepping. We demonstrate that a critical element of Eg5, loop 5 (L5), accelerates ADP release during the initial MT-binding event. Furthermore, our electron paramagnetic resonance data show that L5 mediates the slow isomerization by preventing Eg5 dimer heads from binding the MT until they release ADP. Finally, we find that Eg5 having a seven-residue deletion within L5 can still hydrolyze ATP and move along MTs, suggesting that L5 is not required to accelerate subsequent steps of the motor along the MT. Taken together, these properties of L5 explain the kinetic effects of L5-directed inhibition on Eg5 activity and may direct further interventions targeting Eg5 activity.


Assuntos
Cinesinas/química , Cinesinas/metabolismo , Multimerização Proteica , Difosfato de Adenosina/análogos & derivados , Difosfato de Adenosina/metabolismo , Adenosina Trifosfatases/metabolismo , Espectroscopia de Ressonância de Spin Eletrônica , Humanos , Cinética , Microtúbulos/metabolismo , Modelos Moleculares , Sondas Moleculares/metabolismo , Proteínas Mutantes/química , Proteínas Mutantes/metabolismo , Mutação/genética , Nucleotídeos/metabolismo , Estrutura Secundária de Proteína , Transporte Proteico , Soluções , Relação Estrutura-Atividade , ortoaminobenzoatos/metabolismo
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