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1.
J Mol Recognit ; 35(1): e2939, 2022 01.
Artigo em Inglês | MEDLINE | ID: mdl-34850458

RESUMO

Experimental and theoretical study was employed to study the adsorption of the diuretic drug, trichlormethiazide (TCM) molecule on AuNPs (TCMA). The stereoelectronic properties of the molecular structure of most stable conformers of TCM and TCMA were studied using DFT/B3LYP-6-311++G (d, p) together with LANL2DZ methodology. The Fourier transform Raman and Infrared spectra of TCM were recorded and analyzed. Quantum chemical calculations of TCM and TCMA molecules were used to evaluate the stability of the molecule, hyper-conjugative interactions, electron delocalization, and binding interactions. The calculated and experimentally observed vibrational frequencies of the molecule were assigned and compared. The shifting and intensity enhancement of the CCl2 band manifests the back-donation and conjugation effect, which are the result of the presence of nitrogen atom adjoining the dichloromethyl groups and the oxygen in the sulfur dioxide group attached among the amino group and the chlorophenyl ring, respectively, which enhances bioactivity. Anticancer activity was examined based on molecular docking analysis, and it was identified that TCM and TCMA molecules act as good inhibitors against lung cancer. SERS analysis and MTT assay confirmed the molecular docking analysis results.


Assuntos
Ouro , Nanopartículas Metálicas , Diuréticos , Nanopartículas Metálicas/química , Modelos Moleculares , Simulação de Acoplamento Molecular , Teoria Quântica , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman , Triclormetiazida
2.
J Mol Recognit ; 34(10): e2920, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34114274

RESUMO

The adsorption properties of the lung cancer agent indapamide (IND) on gold nanoparticles (AuNPs), were studied with the help of surface-enhanced Raman scattering techniques. The structure-activity of the IND and INDA molecule has been studied using DFT/B3LYP methodology. NBO analysis reveals that, both the molecules are stabilized by a C─H… O intramolecular hydrogen bonding, apart from the conjugative and intramolecular charge transfer interactions. The analysis of the electron density of frontier molecular orbital analysis gives a comparative idea of the reactivity, the low kinetic stability, and low value of energy gap indicating the electron transport in the molecule and thereby its bioactivity. The molecular electrostatic potential, local and global reactivity indicators predict the reactive site of the molecules. FT-IR, FT-Raman, and surface-enhanced Raman scattering have been investigated and compared with the theoretical prediction. Effective in-silico (molecular docking) biological activity screening of the molecules was checked on lung cancer cells. In-vitro (surface-enhanced Raman scattering techniques and MTT assay) analysis confirms the results from the in-silico analysis. This study promotes the potential of SERS agents for targeted drug delivery and photothermal therapy and the novelty of the IND and INDA molecule against lung cancer activity.


Assuntos
Antineoplásicos/farmacologia , Indapamida/química , Indapamida/farmacologia , Nanopartículas Metálicas/química , Células A549 , Adsorção , Antineoplásicos/química , Antineoplásicos/metabolismo , Sítios de Ligação , Sobrevivência Celular/efeitos dos fármacos , Simulação por Computador , Teoria da Densidade Funcional , Ouro , Humanos , Indapamida/metabolismo , Modelos Moleculares , Conformação Molecular , Simulação de Acoplamento Molecular , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman
3.
J Mol Recognit ; 34(11): e2916, 2021 11.
Artigo em Inglês | MEDLINE | ID: mdl-34142724

RESUMO

The optimized geometry, FT-Raman, FT-IR, surface-enhanced Raman scattering, UV-Vis spectra, frontier molecular orbital analysis, molecular electrostatic potential analysis, and local and global reactivity descriptors of diphenylhydantoin (DPH) and diphenylhydantoin@AuNPs (DPHA) molecule have been investigated with the help of density functional theory method (B3LYP/6-31++G [d,p] together with LANL2DZ) and was compared and analyzed with the corresponding experimental data in order to identify their structural and bonding features responsible for their bioactivity. In-silico (molecular docking) biological activity screening of the molecules together with the in-vitro (SERS and MTT assay) analysis confirms the anticancer activity of DPH and DPHA molecules. The results of the structure-activity studies and bioactivity studies signify that the DPHA molecule is more active than the DPH molecule against lung cancer.


Assuntos
Antineoplásicos/farmacologia , Ouro/química , Neoplasias Pulmonares/tratamento farmacológico , Nanopartículas Metálicas/administração & dosagem , Simulação de Acoplamento Molecular , Fenitoína/farmacologia , Teoria Quântica , Células A549 , Antineoplásicos/química , Humanos , Técnicas In Vitro , Neoplasias Pulmonares/patologia , Nanopartículas Metálicas/química , Modelos Moleculares , Fenitoína/química , Espectrofotometria Ultravioleta , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman , Termodinâmica , Bloqueadores do Canal de Sódio Disparado por Voltagem/química , Bloqueadores do Canal de Sódio Disparado por Voltagem/farmacologia
4.
J Mol Recognit ; 34(9): e2899, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-33783052

RESUMO

The adsorption behavior of a lung cancer agent, Dianhydro-D-glucitol (DIS) on gold nanoparticles (AuNPs) was studied using surface-enhanced Raman scattering techniques. The stabilized geometry, inter- and intra-molecular hydrogen bond, and harmonic vibrational wavenumbers of DIS and DIS adsorbed on AuNPs (DISA) surface have been investigated with the help of the density functional theory (DFT) method. The stability of the molecules arising from stereoelectronic interactions, leading to its bioactivity, has been confirmed using natural bond orbital (NBO) analysis, which was further substantiated by the narrow HOMO LUMO energy gap obtained for DISA, from frontier molecular orbital analysis as well as electronic spectral analysis. The molecular electrostatic potential analysis along with local and global reactivity descriptors predicts the reactive site of the molecules. Molecular docking study was performed to obtain information about protein-ligand reactions for DIS and DISA, with different cancer proteins. This study enlightens the potential of SERS agents for targeted drug delivery and photothermal. The in vitro cytotoxic effects of DPH and DPHA molecules on lung cancer cell lines were analyzed using the MTT assay and the SERS method.


Assuntos
Teoria da Densidade Funcional , Neoplasias Pulmonares/tratamento farmacológico , Nanopartículas Metálicas/química , Simulação de Acoplamento Molecular , Sorbitol/química , Células A549 , Adsorção , Antineoplásicos/química , Antineoplásicos/uso terapêutico , Ouro , Humanos , Sorbitol/uso terapêutico , Análise Espectral Raman
5.
Heliyon ; 5(5): e01574, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-31080902

RESUMO

Glycyl-L-Valine (GLV) crystals were grown using distilled water as the solvent at room temperature by solution growth technique. Powder X-ray diffraction confirms the crystalline quality of GLV crystal. The molecular structure of GLV crystal was identified by 13C NMR spectral studies. The nonlinear optical (NLO) behavior of the crystal was found to be ∼4.3 times greater than that of potassium dihydrogen orthophosphate. FT-Raman and FT-IR spectra of the GLV were recorded and complete functional group assignment of the determined vibrational bands of GLV have been reported. Density functional theoretical method (DFT) was performed using B3LYP with the 6-311+G (d, p) basis set and the results were compared with the experimental values which confirm the intermolecular interactions responsible for the enhanced NLO activity of the molecule, as evident from NBO and Hirshfeld analyses. The calculated HOMO and LUMO energies show that charge transfer occurs within the molecule. In addition, the molecular electrostatic potential (MEP) analysis, Mulliken atomic charges of the GLV molecule has been investigated using theoretical calculations.

6.
Artigo em Inglês | MEDLINE | ID: mdl-24184624

RESUMO

Vibrational frequencies of 2-Hydroxy-4-Methoxybenzophenone (HMB) have been reassigned with the aid of normal coordinate analysis (NCA) following the scaled quantum mechanical force field (SQMFF) methodology. The conformational analyses were performed and the energies of the different possible conformers were determined. The geometry of different conformers of the compounds were optimized with B3LYP method using 6-311++G(d,p) basis set to characterize all stationary points as minima. The optimized structural parameters of the most stable conformer were used in the vibrational frequency calculations. The force constants obtained from the B3LYP/6-311++G(d,p) method have been utilized in the normal coordinate analysis. The temperature dependence of the thermodynamic properties, heat capacity at constant pressure (Cp), entropy (S) and enthalpy change (ΔH) for the compound was also determined by B3LYP/6-311++G(d,p) method. The total electron density and Molecular electrostatic potential surfaces of the molecules were constructed by Natural Bond Orbital analysis using B3LYP/6-311++G(d,p) method to display electrostatic potential (electron+nuclei) distribution, molecular shape, size, and dipole moments of the molecule. The electronic properties, HOMO and LUMO energies were measured.


Assuntos
Benzofenonas/química , Modelos Moleculares , Conformação Molecular , Teoria Quântica , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman , Eletricidade Estática , Termodinâmica
7.
Spectrochim Acta A Mol Biomol Spectrosc ; 122: 375-86, 2014 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-24317264

RESUMO

The conformational behavior and structural stability of trans-1,2-bis(3,5-dimethoxy phenyl)-ethene (TDBE) were investigated by using density functional theory (DFT) method with the B3LYP/6-311++G(d,p) basis set combination. The vibrational wavenumbers of TDBE were computed at DFT level and complete vibrational assignments were made on the basis of normal coordinate analysis calculations (NCA). The DFT force field transformed to natural internal coordinates was corrected by a well-established set of scale factors that were found to be transferable to the title compound. The infrared and Raman spectra were also predicted from the calculated intensities. The observed Fourier transform infrared (FTIR) and Fourier transform (FT) Raman vibrational wavenumbers were analyzed and compared with the theoretically predicted vibrational spectra. Comparison of the simulated spectra with the experimental spectra provides important information about the ability of the computational method to describe the vibrational modes. Information about the size, shape, charge density distribution and site of chemical reactivity of the molecules has been obtained by mapping electron density isosurface with electrostatic potential surfaces (ESP).


Assuntos
Etilenos/química , Modelos Moleculares , Conformação Molecular , Teoria Quântica , Análise Espectral Raman , Vibração , Espectroscopia de Infravermelho com Transformada de Fourier , Eletricidade Estática , Temperatura
8.
Artigo em Inglês | MEDLINE | ID: mdl-23792238

RESUMO

FT-IR and FT-Raman spectra of 1, 3-Bis (hydroxymethyl) benzimidazolin-2-one were recorded and analyzed in the solid phase. The optimized molecular geometry and vibrational wavenumbers have also been calculated in optimized structure by using DFT method. Scaled quantum mechanical force fields have also been used to calculate potential energy distributions in order to make conspicuous vibrational assignments. The red shifting of the O-H stretching wavenumber is due to the formation of O-H···O intermolecular hydrogen bonding. The lowering and splitting of the carbonyl stretching vibrational modes is assigned to the intermolecular association based on C=O···H type hydrogen bonding in the molecule. Chemical interpretation of hyperconjugative interactions was done by natural bond orbital analysis.


Assuntos
Benzimidazóis/química , Ligação de Hidrogênio , Modelos Moleculares , Teoria Quântica , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman
9.
Artigo em Inglês | MEDLINE | ID: mdl-23078790

RESUMO

The powder form NIR-FT Raman and FT-IR spectra of 3-acetyl-7-methoxycoumarin (3A7MC) have been recorded in the regions 4000-400 and 3500-100 cm(-1), respectively. The equilibrium geometry, vibrational frequencies, band intensities, NMR spectra, NBO analysis and UV-Vis spectral studies of the most stable conformer have been calculated by density functional B3LYP method with the 6-311G(d,p) basis set. A complete vibrational analysis has been attempted on the basis of experimental infrared and Raman spectra, the calculated wavenumber and intensity of the vibrational bands and the potential energy distribution over the internal coordinates. Information about the size, shape, charge density distribution and site of chemical reactivity of the molecules has been obtained by mapping the electron density isosurface with electrostatic potential surfaces (ESP). Natural bond orbital analysis has been carried out to understand the nature of different interactions responsible for the electron delocalization and the intramolecular charge transfer between the orbitals (n→π(∗), n→σ(∗), π→π(∗)).


Assuntos
Cumarínicos/química , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman , Modelos Moleculares , Conformação Molecular , Teoria Quântica
10.
Spectrochim Acta A Mol Biomol Spectrosc ; 81(1): 85-98, 2011 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-21775197

RESUMO

The spectroscopic properties of the crystallized nonlinear optical molecule L-histidinium bromide monohydrate (abbreviated as L-HBr-mh) have been recorded and analyzed by FT-IR, FT-Raman and UV techniques. The equilibrium geometry, vibrational wavenumbers and the first order hyperpolarizability of the crystal were calculated with the help of density functional theory computations. The optimized geometric bond lengths and bond angles obtained by using DFT (B3LYP/6-311++G(d,p)) show good agreement with the experimental data. The complete assignments of fundamental vibrations were performed on the basis of the total energy distribution (TED) of the vibrational modes, calculated with scaled quantum mechanics (SQM) method. The natural bond orbital (NBO) analysis confirms the occurrence of strong intra and intermolecular N-H⋯O hydrogen bonding.


Assuntos
Brometos/química , Histidina/química , Cristalografia por Raios X , Elétrons , Ligação de Hidrogênio , Modelos Moleculares , Conformação Molecular , Dinâmica não Linear , Rotação Ocular , Teoria Quântica , Rotação , Análise Espectral , Eletricidade Estática , Vibração , Água/química
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