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1.
Proc Natl Acad Sci U S A ; 113(18): 5047-52, 2016 May 03.
Artigo em Inglês | MEDLINE | ID: mdl-27091964

RESUMO

The effect of a mutation depends on its interaction with the genetic background in which it is assessed. Studies in experimental systems have demonstrated that such interactions are common among beneficial mutations and often follow a pattern consistent with declining evolvability of more fit genotypes. However, these studies generally examine the consequences of interactions between a small number of focal mutations. It is not clear, therefore, that findings can be extrapolated to natural populations, where new mutations may be transferred between genetically divergent backgrounds. We build on work that examined interactions between four beneficial mutations selected in a laboratory-evolved population of Escherichia coli to test how they interact with the genomes of diverse natural isolates of the same species. We find that the fitness effect of transferred mutations depends weakly on the genetic and ecological similarity of recipient strains relative to the donor strain in which the mutations were selected. By contrast, mutation effects were strongly inversely correlated to the initial fitness of the recipient strain. That is, there was a pattern of diminishing returns whereby fit strains benefited proportionally less from an added mutation. Our results strengthen the view that the fitness of a strain can be a major determinant of its ability to adapt. They also support a role for barriers of transmission, rather than differential selection of transferred DNA, as an explanation of observed phylogenetically determined patterns of restricted recombination among E. coli strains.


Assuntos
Escherichia coli/genética , Interação Gene-Ambiente , Aptidão Genética/genética , Modelos Genéticos , Mutação/genética , Seleção Genética/genética , Simulação por Computador , Ecossistema , Epistasia Genética , Escherichia coli/classificação , Medição de Risco/métodos
2.
Conserv Genet Resour ; 3(3): 429-431, 2011 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-21731595

RESUMO

PolyAna (available at http://www.biol.sc.edu/~austin/) aids in the analysis of natural selection on protein-coding sequences by estimating sample gene diversity at individual polymorphic nucleotide sites, which are classified as synonymous, non-synonymous, or ambiguous.

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