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1.
Environ Monit Assess ; 194(Suppl 2): 775, 2022 Oct 18.
Artigo em Inglês | MEDLINE | ID: mdl-36255561

RESUMO

Access to sufficient water, sanitation, and hygiene (WASH) services is a crucial requirement for patients during therapy and general well-being in the hospital. However, in low- and middle-income countries, these services are often inadequate, resulting in increased morbidity and mortality of patients. This study aimed at assessing the current situation of WASH services in six District Health Care Facilities (DHCFs) in rural areas of the Mekong Delta provinces, Vietnam. The results showed that these services were available with inappropriate quality, which did not compromise the stakeholders' needs. The revealed WASH infrastructures have raised concerns about the prolonged hospital stays for patients and push nosocomial infections to a high level. The safety of the water supply was doubted as the high E. coli (> 60%) and total coliform incidence (86%) was observed with very low residual chlorine concentration (< 0.1 mg/L) in water quality assessment. Moreover, water supply contained a high concentration of iron (up to 15.55 mg/L) in groundwater in one DHCF. Technical assessment tool analysis proved that the improper management and lack of knowledge by human resources were the primary roots of the observed status WASH services. Improvement of the perceptions of WASH should be done for the hospital staff with collaboration and support from the government to prevent incidents in the future.


Assuntos
Escherichia coli , Saneamento , Humanos , Saneamento/métodos , Cloro , Vietnã , Monitoramento Ambiental , Higiene , Abastecimento de Água , Ferro , Atenção à Saúde
2.
J Bacteriol ; 204(10): e0024722, 2022 Oct 18.
Artigo em Inglês | MEDLINE | ID: mdl-36094307

RESUMO

The disease-producing capacity of the opportunistic pathogen Enterococcus faecalis is enhanced by the ability of the bacterium to evade killing by antimicrobial agents. Survival of E. faecalis in the presence of the human antimicrobial enzyme lysozyme is mediated in part by the site 2 metalloprotease Eep; however, a complete model of enterococcal lysozyme resistance has not been elucidated. To better understand the molecular basis for lysozyme resistance in E. faecalis, we analyzed Δeep suppressor mutants that acquire resistance to lysozyme through mutation of the gene OG1RF_11713, a predicted teichoic acid biosynthesis-encoding gene located within the variable region of the enterococcal polysaccharide antigen (epa) locus. Sequence comparisons revealed that OG1RF_11713 is most similar to the cytidine-5'-diphosphate (CDP)-glycerol:poly-(glycerolphosphate)glycerophosphotransferase TagF from Staphylococcus epidermidis. Inactivation of OG1RF_11713 in both the wild-type and Δeep genetic backgrounds was sufficient to increase the resistance of E. faecalis OG1RF to lysozyme. Minimal amounts of N-acetylgalactosamine were detectable in cell wall carbohydrate extracts of OG1RF_11713 deletion mutants, and this was associated with a reduction in negative cell surface charge. Targeted disruption of OG1RF_11713 was also associated with increased susceptibility to the antibiotic polymyxin B and membrane-targeting detergents and decreased susceptibility to the lantibiotic nisin. This work implicates OG1RF_11713 as a major determinant of cell envelope integrity and provides further validation that lysozyme resistance is intrinsically linked to the modification of enterococcal cell wall polysaccharides. IMPORTANCE Enterococcus faecalis is a leading cause of health-care-associated infections for which there are limited treatment options. E. faecalis is resistant to several antibiotics and to high concentrations of the human antimicrobial enzyme lysozyme. The molecular mechanisms that mediate lysozyme resistance in E. faecalis are complex and remain incompletely characterized. This work demonstrates that a gene located within the variable region of the enterococcal polysaccharide antigen locus of E. faecalis strain OG1RF (OG1RF_11713), which is predicted to encode a component of the teichoic acid biosynthesis machinery, is part of the lysozyme resistance circuitry and is important for enterococcal cell wall integrity. These findings suggest that OG1RF_11713 is a potential target for new therapeutic strategies to combat enterococcal infections.


Assuntos
Enterococcus faecalis , Nisina , Humanos , Enterococcus faecalis/genética , Enterococcus faecalis/metabolismo , Nisina/genética , Muramidase/metabolismo , Detergentes/metabolismo , Polimixina B , Acetilgalactosamina , Glicerofosfatos , Difosfatos/metabolismo , Glicerol/metabolismo , Polissacarídeos/metabolismo , Antibacterianos/farmacologia , Antibacterianos/metabolismo , Fenótipo , Citidina , Cistina Difosfato/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo
3.
Health Care Women Int ; 40(1): 3-12, 2019 01.
Artigo em Inglês | MEDLINE | ID: mdl-29116887

RESUMO

Health care facilities in low- and middle-income countries are high-risk settings, and face special challenges to achieving sustainable water, sanitation, and hygiene (WASH) services. Our applied interdisciplinary research conducted in India and Uganda analyzed six dimensions of WASH services in selected health care facilities, including menstrual hygiene management. To be effective, WASH monitoring strategies in health care facilities must include gender sensitive measures. We present a novel strategy, showing that applied gender sensitive multitool assessments are highly productive in assessments of WASH services and facilities from user and provider perspectives. We discuss its potential for applications at scale and as an area of future research.


Assuntos
Desinfecção das Mãos/normas , Instalações de Saúde/normas , Higiene , Saneamento , Água , Adolescente , Adulto , Feminino , Humanos , Índia , Entrevistas como Assunto , Menstruação , Inquéritos e Questionários , Uganda , Adulto Jovem
4.
BMC Genomics ; 17(1): 924, 2016 11 16.
Artigo em Inglês | MEDLINE | ID: mdl-27852217

RESUMO

BACKGROUND: While a few studies on the variations in mRNA expression and half-lives measured under different growth conditions have been used to predict patterns of regulation in bacterial organisms, the extent to which this information can also play a role in defining metabolic phenotypes has yet to be examined systematically. Here we present the first comprehensive study for a model methanogen. RESULTS: We use expression and half-life data for the methanogen Methanosarcina acetivorans growing on fast- and slow-growth substrates to examine the regulation of its genes. Unlike Escherichia coli where only small shifts in half-lives were observed, we found that most mRNA have significantly longer half-lives for slow growth on acetate compared to fast growth on methanol or trimethylamine. Interestingly, half-life shifts are not uniform across functional classes of enzymes, suggesting the existence of a selective stabilization mechanism for mRNAs. Using the transcriptomics data we determined whether transcription or degradation rate controls the change in transcript abundance. Degradation was found to control abundance for about half of the metabolic genes underscoring its role in regulating metabolism. Genes involved in half of the metabolic reactions were found to be differentially expressed among the substrates suggesting the existence of drastically different metabolic phenotypes that extend beyond just the methanogenesis pathways. By integrating expression data with an updated metabolic model of the organism (iST807) significant differences in pathway flux and production of metabolites were predicted for the three growth substrates. CONCLUSIONS: This study provides the first global picture of differential expression and half-lives for a class II methanogen, as well as provides the first evidence in a single organism that drastic genome-wide shifts in RNA half-lives can be modulated by growth substrate. We determined which genes in each metabolic pathway control the flux and classified them as regulated by transcription (e.g. transcription factor) or degradation (e.g. post-transcriptional modification). We found that more than half of genes in metabolism were controlled by degradation. Our results suggest that M. acetivorans employs extensive post-transcriptional regulation to optimize key metabolic steps, and more generally that degradation could play a much greater role in optimizing an organism's metabolism than previously thought.


Assuntos
Genoma Arqueal , Methanosarcina/genética , RNA/metabolismo , Dactinomicina/farmacologia , Expressão Gênica , Meia-Vida , Redes e Vias Metabólicas , Metanol/metabolismo , Methanosarcina/classificação , Methanosarcina/metabolismo , Modelos Biológicos , Fenótipo , Inibidores da Síntese de Proteínas/farmacologia , RNA/isolamento & purificação , RNA Mensageiro/metabolismo , Análise de Sequência de RNA , Transcrição Gênica/efeitos dos fármacos
5.
Archaea ; 2014: 898453, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24729742

RESUMO

Progress towards a complete model of the methanogenic archaeum Methanosarcina acetivorans is reported. We characterized size distribution of the cells using differential interference contrast microscopy, finding them to be ellipsoidal with mean length and width of 2.9 µ m and 2.3 µ m, respectively, when grown on methanol and 30% smaller when grown on acetate. We used the single molecule pull down (SiMPull) technique to measure average copy number of the Mcr complex and ribosomes. A kinetic model for the methanogenesis pathways based on biochemical studies and recent metabolic reconstructions for several related methanogens is presented. In this model, 26 reactions in the methanogenesis pathways are coupled to a cell mass production reaction that updates enzyme concentrations. RNA expression data (RNA-seq) measured for cell cultures grown on acetate and methanol is used to estimate relative protein production per mole of ATP consumed. The model captures the experimentally observed methane production rates for cells growing on methanol and is most sensitive to the number of methyl-coenzyme-M reductase (Mcr) and methyl-tetrahydromethanopterin:coenzyme-M methyltransferase (Mtr) proteins. A draft transcriptional regulation network based on known interactions is proposed which we intend to integrate with the kinetic model to allow dynamic regulation.


Assuntos
Simulação por Computador , Análise do Fluxo Metabólico , Redes e Vias Metabólicas , Metano/metabolismo , Methanosarcina/citologia , Methanosarcina/metabolismo , Metanol/metabolismo
6.
Antimicrob Agents Chemother ; 57(11): 5432-7, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23959313

RESUMO

Gram-positive bacteria cause serious human illnesses through combinations of cell surface and secreted virulence factors. We initiated studies with four of these organisms to develop novel topical antibacterial agents that interfere with growth and exotoxin production, focusing on menaquinone analogs. Menadione, 1,4-naphthoquinone, and coenzymes Q1 to Q3 but not menaquinone, phylloquinone, or coenzyme Q10 inhibited the growth and to a greater extent exotoxin production of Staphylococcus aureus, Bacillus anthracis, Streptococcus pyogenes, and Streptococcus agalactiae at concentrations of 10 to 200 µg/ml. Coenzyme Q1 reduced the ability of S. aureus to cause toxic shock syndrome in a rabbit model, inhibited the growth of four Gram-negative bacteria, and synergized with another antimicrobial agent, glycerol monolaurate, to inhibit S. aureus growth. The staphylococcal two-component system SrrA/B was shown to be an antibacterial target of coenzyme Q1. We hypothesize that menaquinone analogs both induce toxic reactive oxygen species and affect bacterial plasma membranes and biosynthetic machinery to interfere with two-component systems, respiration, and macromolecular synthesis. These compounds represent a novel class of potential topical therapeutic agents.


Assuntos
Antibacterianos/farmacologia , Bacillus anthracis/efeitos dos fármacos , Staphylococcus aureus/efeitos dos fármacos , Streptococcus agalactiae/efeitos dos fármacos , Streptococcus pyogenes/efeitos dos fármacos , Vitamina K 2/farmacologia , Administração Tópica , Animais , Bacillus anthracis/crescimento & desenvolvimento , Proteínas de Bactérias/antagonistas & inibidores , Proteínas de Bactérias/metabolismo , Membrana Celular/efeitos dos fármacos , Sinergismo Farmacológico , Exotoxinas/antagonistas & inibidores , Exotoxinas/metabolismo , Humanos , Lauratos/farmacologia , Monoglicerídeos/farmacologia , Coelhos , Espécies Reativas de Oxigênio/metabolismo , Proteínas Repressoras/antagonistas & inibidores , Proteínas Repressoras/metabolismo , Choque Séptico/tratamento farmacológico , Choque Séptico/microbiologia , Infecções Estafilocócicas/tratamento farmacológico , Infecções Estafilocócicas/microbiologia , Staphylococcus aureus/crescimento & desenvolvimento , Staphylococcus aureus/metabolismo , Streptococcus agalactiae/crescimento & desenvolvimento , Streptococcus pyogenes/crescimento & desenvolvimento
7.
Clin Microbiol Rev ; 26(3): 422-47, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23824366

RESUMO

SUMMARY This review begins with a discussion of the large family of Staphylococcus aureus and beta-hemolytic streptococcal pyrogenic toxin T lymphocyte superantigens from structural and immunobiological perspectives. With this as background, the review then discusses the major known and possible human disease associations with superantigens, including associations with toxic shock syndromes, atopic dermatitis, pneumonia, infective endocarditis, and autoimmune sequelae to streptococcal illnesses. Finally, the review addresses current and possible novel strategies to prevent superantigen production and passive and active immunization strategies.


Assuntos
Exotoxinas/imunologia , Staphylococcus aureus/imunologia , Streptococcus pyogenes/imunologia , Superantígenos/imunologia , Animais , Exotoxinas/química , Humanos , Modelos Moleculares , Infecções Estafilocócicas/microbiologia , Infecções Estreptocócicas/microbiologia , Superantígenos/química
8.
Infect Immun ; 81(5): 1696-708, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23460519

RESUMO

Enterococcus faecalis is part of the human intestinal microbiome and is a prominent cause of health care-associated infections. The pathogenesis of many E. faecalis infections, including endocarditis and catheter-associated urinary tract infection (CAUTI), is related to the ability of clinical isolates to form biofilms. To identify chromosomal genetic determinants responsible for E. faecalis biofilm-mediated infection, we used a rabbit model of endocarditis to test strains with transposon insertions or in-frame deletions in biofilm-associated loci: ahrC, argR, atlA, opuBC, pyrC, recN, and sepF. Only the ahrC mutant was significantly attenuated in endocarditis. We demonstrate that the transcriptional regulator AhrC and the protease Eep, which we showed previously to be an endocarditis virulence factor, are also required for full virulence in murine CAUTI. Therefore, AhrC and Eep can be classified as enterococcal biofilm-associated virulence factors. Loss of ahrC caused defects in early attachment and accumulation of biofilm biomass. Characterization of ahrC transcription revealed that the temporal expression of this locus observed in wild-type cells promotes initiation of early biofilm formation and the establishment of endocarditis. This is the first report of AhrC serving as a virulence factor in any bacterial species.


Assuntos
Proteínas de Bactérias/fisiologia , Biofilmes , Endocardite Bacteriana/microbiologia , Enterococcus faecalis/patogenicidade , Proteínas de Membrana/fisiologia , Fatores de Transcrição/fisiologia , Fatores de Virulência/fisiologia , Animais , Modelos Animais de Doenças , Feminino , Regulação Bacteriana da Expressão Gênica , Camundongos , Camundongos Endogâmicos C57BL , Coelhos
9.
J Bacteriol ; 195(8): 1666-79, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23378511

RESUMO

Neisseria gonorrhoeae uses a type IV secretion system (T4SS) to secrete chromosomal DNA into the surrounding milieu. The DNA is effective in transforming gonococci in the population, and this mechanism of DNA donation may contribute to the high degree of genetic diversity in this species. Similar to other F-like T4SSs, the gonococcal T4SS requires a putative membrane protein, TraG, for DNA transfer. In F-plasmid and related systems, the homologous protein acts in pilus production, mating pair stabilization, and entry exclusion. We characterized the localization, membrane topology, and variation of TraG in N. gonorrhoeae. TraG was found to be an inner-membrane protein with one large periplasmic region and one large cytoplasmic region. Each gonococcal strain carried one of three different alleles of traG. Strains that carried the smallest allele of traG were found to lack the peptidoglycanase gene atlA but carried a peptidoglycan endopeptidase gene in place of atlA. The purified endopeptidase degraded gonococcal peptidoglycan in vitro, cutting the peptide cross-links. Although the other two traG alleles functioned for DNA secretion in strain MS11, the smallest traG did not support DNA secretion. Despite the requirement for a mating pair stabilization homologue, static coculture transformation experiments demonstrated that DNA transfer was nuclease sensitive and required active uptake by the recipient, thus demonstrating that transfer occurred by transformation and not conjugation. Together, these results demonstrate the TraG acts in a process of DNA export not specific to conjugation and that different forms of TraG affect what substrates can be transported.


Assuntos
Membrana Celular/fisiologia , DNA Bacteriano/metabolismo , Proteínas de Escherichia coli/metabolismo , Proteínas de Membrana/metabolismo , Neisseria gonorrhoeae/metabolismo , Alelos , Técnicas Bacteriológicas , Cromossomos Bacterianos , Técnicas de Cocultura , Conjugação Genética , Proteínas de Escherichia coli/genética , Regulação Bacteriana da Expressão Gênica/fisiologia , Proteínas de Membrana/genética , Dados de Sequência Molecular , Neisseria gonorrhoeae/citologia , Neisseria gonorrhoeae/genética , Plasmídeos , Transformação Bacteriana
10.
PLoS One ; 7(7): e41157, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22815951

RESUMO

Staphylococcus aureus produces superantigens (SAgs) that bind and cross-link T cells and APCs, leading to activation and proliferation of immune cells. SAgs bind to variable regions of the ß-chains of T cell receptors (Vß-TCRs), and each SAg binds a unique subset of Vß-TCRs. This binding leads to massive cytokine production and can result in toxic shock syndrome (TSS). The most abundantly produced staphylococcal SAgs and the most common causes of staphylococcal TSS are TSS toxin-1 (TSST-1), and staphylococcal enterotoxins B and C (SEB and SEC, respectively). There are several characterized variants of humans SECs, designated SEC1-4, but only one variant of SEB has been described. Sequencing the seb genes from over 20 S. aureus isolates show there are at least five different alleles of seb, encoding forms of SEB with predicted amino acid substitutions outside of the predicted immune-cell binding regions of the SAgs. Examination of purified, variant SEBs indicates that these amino acid substitutions cause differences in proliferation of rabbit splenocytes in vitro. Additionally, the SEBs varied in lethality in a rabbit model of TSS. The SEBs were diverse in their abilities to cause proliferation of human peripheral blood mononuclear cells, and differed in their activation of subsets of T cells. A soluble, high-affinity Vß-TCR, designed to neutralize the previously characterized variant of SEB (SEB1), was able to neutralize the variant SEBs, indicating that this high-affinity peptide may be useful in treating a variety of SEB-mediated illnesses.


Assuntos
Enterotoxinas/metabolismo , Staphylococcus aureus/metabolismo , Sequência de Aminoácidos , Animais , Proliferação de Células , Clonagem Molecular , Genes Codificadores da Cadeia beta de Receptores de Linfócitos T/genética , Variação Genética , Humanos , Leucócitos Mononucleares/metabolismo , Linfócitos/citologia , Modelos Moleculares , Conformação Molecular , Dados de Sequência Molecular , Peptídeos/química , Estrutura Terciária de Proteína , Coelhos , Homologia de Sequência de Aminoácidos , Superantígenos/metabolismo
11.
Front Microbiol ; 3: 259, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22837755

RESUMO

The discovery of the third domain of life, the Archaea, is one of the most exciting findings of the last century. These remarkable prokaryotes are well known for their adaptations to extreme environments; however, Archaea have also conquered moderate environments. Many of the archaeal biochemical processes, such as methane production, are unique in nature and therefore of great scientific interest. Although formerly restricted to biochemical and physiological studies, sophisticated systems for genetic manipulation have been developed during the last two decades for methanogenic archaea, halophilic archaea and thermophilic, sulfur-metabolizing archaea. The availability of these tools has allowed for more complete studies of archaeal physiology and metabolism and most importantly provides the basis for the investigation of gene expression, regulation and function. In this review we provide an overview of methods for genetic manipulation of Methanosarcina spp., a group of methanogenic archaea that are key players in the global carbon cycle and which can be found in a variety of anaerobic environments.

12.
J Biol Chem ; 287(14): 11222-33, 2012 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-22334697

RESUMO

Symptomatic gonococcal infection, caused exclusively by the human-specific pathogen Neisseria gonorrhoeae (the gonococcus), is characterized by the influx of polymorphonuclear leukocytes (PMNs) to the site of infection. Although PMNs possess a potent antimicrobial arsenal comprising both oxidative and non-oxidative killing mechanisms, gonococci survive this interaction, suggesting that the gonococcus has evolved many defenses against PMN killing. We previously identified the NG1686 protein as a gonococcal virulence factor that protects against both non-oxidative PMN-mediated killing and oxidative killing by hydrogen peroxide. In this work, we show that deletion of ng1686 affects gonococcal colony morphology but not cell morphology and that overexpression of ng1686 does not confer enhanced survival to hydrogen peroxide on gonococci. NG1686 contains M23B endopeptidase active sites found in proteins that cleave bacterial cell wall peptidoglycan. Strains of N. gonorrhoeae expressing mutant NG1686 proteins with substitutions in many, but not all, conserved metallopeptidase active sites recapitulated the hydrogen peroxide sensitivity and altered colony morphology of the Δng1686 mutant strain. We showed that purified NG1686 protein degrades peptidoglycan in vitro and that mutations in many conserved active site residues abolished its degradative activity. Finally, we demonstrated that NG1686 possesses both dd-carboxypeptidase and endopeptidase activities. We conclude that the NG1686 protein is a M23B peptidase with dual activities that targets the cell wall to affect colony morphology and resistance to hydrogen peroxide and PMN-mediated killing.


Assuntos
Farmacorresistência Bacteriana , Peróxido de Hidrogênio/farmacologia , Metaloproteases/metabolismo , Neisseria gonorrhoeae/efeitos dos fármacos , Fatores de Virulência/metabolismo , Antibacterianos/farmacologia , Carboxipeptidases/metabolismo , Domínio Catalítico , Sequência Conservada , Endopeptidases/metabolismo , Escherichia coli/metabolismo , Metaloproteases/química , Metaloproteases/genética , Mutação , Neisseria gonorrhoeae/citologia , Neisseria gonorrhoeae/enzimologia , Neisseria gonorrhoeae/genética , Neutrófilos/microbiologia , Peptidoglicano/metabolismo , Periplasma/efeitos dos fármacos , Periplasma/enzimologia , Fenótipo , Proteólise/efeitos dos fármacos , Fatores de Virulência/química , Fatores de Virulência/genética
13.
Appl Ergon ; 43(1): 48-56, 2012 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-21497791

RESUMO

This study focuses on the comparison of traditional engineering drawings with a CAD (computer aided design) visualization in terms of user performance and eye movements in an applied context. Twenty-five students of mechanical engineering completed search tasks for measures in two distinct depictions of a car engine component (engineering drawing vs. CAD model). Besides spatial dimensionality, the display types most notably differed in terms of information layout, access and interaction options. The CAD visualization yielded better performance, if users directly manipulated the object, but was inferior, if employed in a conventional static manner, i.e. inspecting only predefined views. An additional eye movement analysis revealed longer fixation durations and a stronger increase of task-relevant fixations over time when interacting with the CAD visualization. This suggests a more focused extraction and filtering of information. We conclude that the three-dimensional CAD visualization can be advantageous if its ability to manipulate is used.


Assuntos
Desenho Assistido por Computador , Reconhecimento Visual de Modelos/fisiologia , Análise e Desempenho de Tarefas , Interface Usuário-Computador , Adulto , Análise de Variância , Cognição/fisiologia , Movimentos Oculares/fisiologia , Feminino , Humanos , Aumento da Imagem , Masculino , Adulto Jovem
14.
J Bacteriol ; 193(19): 5155-63, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21784930

RESUMO

Sinorhizobium meliloti, the nitrogen-fixing symbiont of alfalfa, has the ability to catabolize myo-, scyllo-, and D-chiro-inositol. Functional inositol catabolism (iol) genes are required for growth on these inositol isomers, and they play a role during plant-bacterium interactions. The inositol catabolism genes comprise the chromosomally encoded iolA (mmsA) and the iolY(smc01163)RCDEB genes, as well as the idhA gene located on the pSymB plasmid. Reverse transcriptase assays showed that the iolYRCDEB genes are transcribed as one operon. The iol genes were weakly expressed without induction, but their expression was strongly induced by myo-inositol. The putative transcriptional regulator of the iol genes, IolR, belongs to the RpiR-like repressor family. Electrophoretic mobility shift assays demonstrated that IolR recognized a conserved palindromic sequence (5'-GGAA-N6-TTCC-3') in the upstream regions of the idhA, iolY, iolR, and iolC genes. Complementation assays found IolR to be required for the repression of its own gene and for the downregulation of the idhA-encoded myo-inositol dehydrogenase activity in the presence and absence of inositol. Further expression studies indicated that the late pathway intermediate 2-keto-5-deoxy-D-gluconic acid 6-phosphate (KDGP) functions as the true inducer of the iol genes. The iolA (mmsA) gene encoding methylmalonate semialdehyde dehydrogenase was not regulated by IolR. The S. meliloti iolA (mmsA) gene product seems to be involved in more than only the inositol catabolic pathway, since it was also found to be essential for valine catabolism, supporting its more recent annotation as mmsA.


Assuntos
Proteínas de Bactérias/metabolismo , Inositol/metabolismo , Proteínas Repressoras/metabolismo , Sinorhizobium meliloti/metabolismo , Proteínas de Bactérias/genética , Ensaio de Desvio de Mobilidade Eletroforética , Regulação Bacteriana da Expressão Gênica/genética , Regulação Bacteriana da Expressão Gênica/fisiologia , Teste de Complementação Genética , Metilmalonato-Semialdeído Desidrogenase (Acilante)/genética , Metilmalonato-Semialdeído Desidrogenase (Acilante)/metabolismo , Ligação Proteica/genética , Ligação Proteica/fisiologia , Proteínas Repressoras/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Sinorhizobium meliloti/enzimologia , Sinorhizobium meliloti/genética , Sinorhizobium meliloti/crescimento & desenvolvimento
15.
Biochemistry ; 50(33): 7157-67, 2011 Aug 23.
Artigo em Inglês | MEDLINE | ID: mdl-21749039

RESUMO

Pulsed-field gel electrophoresis (PFGE) clonal type USA200 is the most widely disseminated Staphylococcus aureus colonizer of the nose and is a major cause of toxic shock syndrome (TSS). Exoproteins derived from these organisms have been suggested to contribute to their colonization and causation of human diseases but have not been well-characterized. Two representative S. aureus USA200 isolates, MNPE (α-toxin positive) and CDC587 (α-toxin mutant), isolated from pulmonary post-influenza TSS and menstrual vaginal TSS, respectively, were evaluated. Biochemical, immunobiological, and cell-based assays, including mass spectrometry, were used to identify key exoproteins derived from the strains that are responsible for proinflammatory and cytotoxic activity on human vaginal epithelial cells. Exoproteins associated with virulence were produced by both strains, and cytolysins (α-toxin and γ-toxin), superantigens, and proteases were identified as the major exoproteins, which caused epithelial cell inflammation and cytotoxicity. Exoprotein fractions from MNPE were more proinflammatory and cytotoxic than those from CDC587 due to high concentrations of α-toxin. CDC587 produced a small amount of α-toxin, despite the presence of a stop codon (TAG) at codon 113. Additional exotoxin identification studies of USA200 strain [S. aureus MN8 (α-toxin mutant)] confirmed that MN8 also produced low levels of α-toxin despite the same stop codon. The differences observed in virulence factor profiles of two USA200 strains provide insight into environmental factors that select for specific virulence factors. Cytolysins, superantigens, and proteases were identified as potential targets, where toxin neutralization may prevent or diminish epithelial damage associated with S. aureus.


Assuntos
Citotoxinas/imunologia , Enterotoxinas/imunologia , Exotoxinas/imunologia , Choque Séptico/imunologia , Infecções Estafilocócicas/imunologia , Staphylococcus aureus/imunologia , Superantígenos/imunologia , Vagina/imunologia , Animais , Cromatografia Líquida de Alta Pressão , Citotoxinas/metabolismo , Eletroforese em Gel de Campo Pulsado , Enterotoxinas/metabolismo , Células Epiteliais/imunologia , Células Epiteliais/metabolismo , Exotoxinas/metabolismo , Feminino , Humanos , Immunoblotting , Imunoglobulina G/imunologia , Interleucina-8/metabolismo , Pulmão/imunologia , Pulmão/metabolismo , Pulmão/microbiologia , Coelhos , Choque Séptico/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Infecções Estafilocócicas/metabolismo , Infecções Estafilocócicas/microbiologia , Staphylococcus aureus/isolamento & purificação , Superantígenos/metabolismo , Suínos , Vagina/metabolismo , Vagina/microbiologia , Fatores de Virulência
16.
Infect Immun ; 79(1): 342-52, 2011 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-20937760

RESUMO

Staphylococcus aureus is a prominent human pathogen and a leading cause of community- and hospital-acquired bacterial infections worldwide. Herein, we describe the identification and characterization of the S. aureus 67.6-kDa hypothetical protein, named for the surface factor promoting resistance to oxidative killing (SOK) in this study. Sequence analysis showed that the SOK gene is conserved in all sequenced S. aureus strains and homologous to the myosin cross-reactive antigen of Streptococcus pyogenes. Immunoblotting and immunofluorescence analysis showed that SOK was copurified with membrane fractions and was exposed on the surface of S. aureus Newman and RN4220. Comparative analysis of wild-type S. aureus and an isogenic deletion strain indicated that SOK contributes to both resistance to killing by human neutrophils and to oxidative stress. In addition, the S. aureus sok deletion strain showed dramatically reduced aortic valve vegetation and bacterial cell number in a rabbit endocarditis model. These results, plus the suspected role of the streptococcal homologue in certain diseases such as acute rheumatic fever, suggest that SOK plays an important role in cardiovascular and other staphylococcal infections.


Assuntos
Proteínas de Bactérias/metabolismo , Endocardite Bacteriana/microbiologia , Staphylococcus aureus/metabolismo , Fatores de Virulência/metabolismo , Animais , Proteínas de Bactérias/genética , Biologia Computacional , Deleção de Genes , Regulação Bacteriana da Expressão Gênica/fisiologia , Humanos , Neutrófilos/fisiologia , Estresse Oxidativo , Polimorfismo de Fragmento de Restrição , Coelhos , Fatores de Virulência/química , Fatores de Virulência/genética
17.
Appl Environ Microbiol ; 76(24): 7972-80, 2010 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-20971862

RESUMO

The nitrogen-fixing symbiont of alfalfa, Sinorhizobium meliloti, is able to use myo-inositol as the sole carbon source. Putative inositol catabolism genes (iolA and iolRCDEB) have been identified in the S. meliloti genome based on their similarities with the Bacillus subtilis iol genes. In this study, functional mutational analysis revealed that the iolA and iolCDEB genes are required for growth not only with the myo-isomer but also for growth with scyllo- and d-chiro-inositol as the sole carbon source. An additional, hypothetical dehydrogenase of the IdhA/MocA/GFO family encoded by the smc01163 gene was found to be essential for growth with scyllo-inositol, whereas the idhA-encoded myo-inositol dehydrogenase was responsible for the oxidation of d-chiro-inositol. The putative regulatory iolR gene, located upstream of iolCDEB, encodes a repressor of the iol genes, negatively regulating the activity of the myo- and the scyllo-inositol dehydrogenases. Mutants with insertions in the iolA, smc01163, and individual iolRCDE genes could not compete against the wild type in a nodule occupancy assay on alfalfa plants. Thus, a functional inositol catabolic pathway and its proper regulation are important nutritional or signaling factors in the S. meliloti-alfalfa symbiosis.


Assuntos
Inositol/metabolismo , Medicago sativa/microbiologia , Nodulação , Sinorhizobium meliloti/fisiologia , Análise Mutacional de DNA , DNA Bacteriano/genética , Regulação Bacteriana da Expressão Gênica , Genes Bacterianos , Redes e Vias Metabólicas/genética , Família Multigênica , Sinorhizobium meliloti/metabolismo
18.
Proc Natl Acad Sci U S A ; 107(32): 14407-12, 2010 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-20660751

RESUMO

Biofilms are surface-associated communities of microbes encompassed by an extracellular matrix. It is estimated that 80% of all bacterial infections involve biofilm formation, but the structure and regulation of biofilms are incompletely understood. Extracellular DNA (eDNA) is a major structural component in many biofilms of the pathogenic bacterium Staphylococcus aureus, but its role is enigmatic. Here, we demonstrate that beta toxin, a neutral sphingomyelinase and a virulence factor of S. aureus, forms covalent cross-links to itself in the presence of DNA (we refer to this as biofilm ligase activity, independent of sphingomyelinase activity) producing an insoluble nucleoprotein matrix in vitro. Furthermore, we show that beta toxin strongly stimulates biofilm formation in vivo as demonstrated by a role in causation of infectious endocarditis in a rabbit model. Together, these results suggest that beta toxin cross-linking in the presence of eDNA assists in forming the skeletal framework upon which staphylococcal biofilms are established.


Assuntos
Toxinas Bacterianas/metabolismo , Biofilmes/crescimento & desenvolvimento , Proteínas Hemolisinas/metabolismo , Nucleoproteínas/metabolismo , Esfingomielina Fosfodiesterase/metabolismo , Staphylococcus/crescimento & desenvolvimento , Animais , Catálise , DNA Bacteriano , Endocardite , Coelhos , Staphylococcus/patogenicidade
19.
Mol Microbiol ; 71(1): 158-71, 2009 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19017267

RESUMO

Neisseria gonorrhoeae (Gc), an obligate human bacterial pathogen, utilizes pilin antigenic variation to evade host immune defences. Antigenic variation is driven by recombination between expressed (pilE) and silent (pilS) copies of the pilin gene, which encodes the major structural component of the type IV pilus. We have investigated the role of the GcRecQ DNA helicase (GcRecQ) in this process. Whereas the vast majority of bacterial RecQ proteins encode a single 'Helicase and RNase D C-terminal' (HRDC) domain, GcRecQ encodes three tandem HRDC domains at its C-terminus. Gc mutants encoding versions of GcRecQ with either two or all three C-terminal HRDC domains removed are deficient in pilin variation and sensitized to UV light-induced DNA damage. Biochemical analysis of a GcRecQ protein variant lacking two HRDC domains, GcRecQDeltaHRDC2,3, shows it has decreased affinity for single-stranded and partial-duplex DNA and reduced unwinding activity on a synthetic Holliday junction substrate relative to full-length GcRecQ in the presence of Gc single-stranded DNA-binding protein (GcSSB). Our results demonstrate that the multiple HRDC domain architecture in GcRecQ is critical for structure-specific DNA binding and unwinding, and suggest that these features are central to GcRecQ's roles in Gc antigenic variation and DNA repair.


Assuntos
Variação Antigênica , Reparo do DNA , Proteínas de Fímbrias/genética , Fímbrias Bacterianas/genética , Neisseria gonorrhoeae/genética , RecQ Helicases/metabolismo , DNA Cruciforme/metabolismo , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , Proteínas de Fímbrias/metabolismo , Fímbrias Bacterianas/metabolismo , Neisseria gonorrhoeae/imunologia , Neisseria gonorrhoeae/metabolismo , Ligação Proteica , Domínios e Motivos de Interação entre Proteínas , RecQ Helicases/genética , RecQ Helicases/imunologia
20.
Bioorg Med Chem ; 16(16): 7838-42, 2008 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-18678499

RESUMO

Rhizopines such as scyllo-inosamine (SIA) and L-3-O-methyl-scyllo-inosamine (3-O-MSI) play an intricate role as nutritional mediators during the establishment of the symbiotic relationship between legumes and rhizobia. The mechanism of action is not well understood. One challenge is the availability of rhizopines, which occur in only minute amounts in plant nodules. We herewith report an efficient synthesis of scyllo-inosamine and its biochemical activity in specific bacteria. SIA was prepared in 7 steps and 32% overall yield from readily available myo-inositol. The chemically synthesized SIA was tested to determine whether it can serve as sole carbon and nitrogen source for Sinorhizobium meliloti wild-type strain L5-30 and for strains carrying mutations in the rhizopine degradation (moc) genes. The analysis of the phenotype of the mutant strains revealed that the moc genes previously shown to be essential for the breakdown of the rhizopines isolated from root nodules are also essential for the utilization of the chemically synthesized SIA.


Assuntos
Amino Açúcares/síntese química , Amino Açúcares/metabolismo , Inositol/análogos & derivados , Sinorhizobium meliloti/metabolismo , Amino Açúcares/química , DNA Bacteriano/química , DNA Bacteriano/genética , Inositol/síntese química , Inositol/química , Inositol/metabolismo , Espectroscopia de Ressonância Magnética , Mutagênese Insercional , Reação em Cadeia da Polimerase , Sinorhizobium meliloti/genética , Espectroscopia de Infravermelho com Transformada de Fourier
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