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1.
Sci Data ; 11(1): 332, 2024 Apr 04.
Artigo em Inglês | MEDLINE | ID: mdl-38575621

RESUMO

Globe-LFMC 2.0, an updated version of Globe-LFMC, is a comprehensive dataset of over 280,000 Live Fuel Moisture Content (LFMC) measurements. These measurements were gathered through field campaigns conducted in 15 countries spanning 47 years. In contrast to its prior version, Globe-LFMC 2.0 incorporates over 120,000 additional data entries, introduces more than 800 new sampling sites, and comprises LFMC values obtained from samples collected until the calendar year 2023. Each entry within the dataset provides essential information, including date, geographical coordinates, plant species, functional type, and, where available, topographical details. Moreover, the dataset encompasses insights into the sampling and weighing procedures, as well as information about land cover type and meteorological conditions at the time and location of each sampling event. Globe-LFMC 2.0 can facilitate advanced LFMC research, supporting studies on wildfire behaviour, physiological traits, ecological dynamics, and land surface modelling, whether remote sensing-based or otherwise. This dataset represents a valuable resource for researchers exploring the diverse LFMC aspects, contributing to the broader field of environmental and ecological research.

2.
PeerJ ; 10: e14310, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36389405

RESUMO

Background: The subtropical dune thicket (hereafter "dune thicket") of the Cape Floristic Region experiences a wide range of fire exposure throughout the landscape, unlike other dry rainforest formations that rarely experience fire. We sought to determine how fire exposure influences species composition and the architectural composition of dune thicket. Methods: We used multivariate analysis and diversity indices based on cover abundance of species to describe the species composition, architectural guild composition and structure of dune thicket sites subject to different levels of fire exposure, namely low (fire return interval of >100 years), moderate (fire return interval of 50-100 years), and high (fire return interval of 10-50 years). Results: The diversity, cover abundance and architectural guild cover abundance of dune thicket canopy species were strongly influenced by the level of fire exposure such that each level was associated with a well-circumscribed vegetation unit. Dune thickets subject to low fire exposure comprises a floristically distinct, low forest characterized by shrubs with one-to-few upright stems (ca. 4-8 m tall) and a relatively small canopy spread (vertical growers). Of the 25 species in this unit, 40% were restricted to it. Dune thickets subject to moderate fire exposure had the highest abundance of lateral spreaders, which are multi-stemmed (ca. 3-6 m tall) species with a large canopy spread and lower stature than vertical growers. None of the 17 species found in this unit was restricted to it. Dune thickets subject to high fire exposure had the highest abundance of hedge-forming shrubs, these being low shrubs (ca. 0.6-1.4 m tall), with numerous shoots arising from an extensive system of below-ground stems. Of the 20 species in this unit, 40% were restricted to it. Multivariate analysis identified three floristic units corresponding to the three fire exposure regimes. Compositional structure, in terms of species and architectural guilds, was most distinctive for dune thickets subject to high and low fire exposure, while the dune thicket subject to moderate fire exposure showed greatest compositional overlap with the other units. Conclusion: Fire exposure profoundly influenced the composition and structure of dune thicket canopy species in the Cape Floristic Region. In the prolonged absence of fire, the thicket is invaded by vertical-growing species that overtop and outcompete the multi-stemmed, laterally-spreading shrubs that dominate this community. Regular exposure to fire selects for traits that enable thicket species to rapidly compete for canopy cover post-fire via the prolific production of resprouts from basal buds below- and above-ground. The trade-off is that plant height is constrained, as proportionately more resources are allocated to below-ground biomass.


Assuntos
Ecossistema , Incêndios , Florestas , Plantas , Biomassa
3.
PeerJ ; 10: e13765, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35919404

RESUMO

In June 2017, extreme fires along the southern Cape coast of South Africa burnt native fynbos and thicket vegetation and caused extensive damage to plantations and residential properties. Invasive alien plants (IAPs) occur commonly in the area and were thought to have changed the behaviour of these fires through their modification of fuel properties relative to that of native vegetation. This study experimentally compared various measures of flammability across groups of native and alien invasive shrub species in relation to their fuel traits. Live plant shoots of 30 species (10 species each of native fynbos, native thicket, and IAPs) were sampled to measure live fuel moisture, dry biomass, fuel bed porosity and the proportions of fine-, coarse- and dead fuels. These shoots were burnt experimentally, and flammability measured in terms of maximum temperature (combustibility), completeness of burn (consumability), and time-to-ignition (ignitability). Multiple regression models were used to assess the relationships between flammability responses and fuel traits, while the Kruskal-Wallis H test was used to establish if differences existed in flammability measures and fuel traits among the vegetation groups. Dry biomass significantly enhanced, while live fuel moisture significantly reduced, maximum temperature, whereas the proportion of fine fuels significantly increased completeness of burn. Unlike other similar studies, the proportion of dead fuels and fuel bed porosity were not retained by any of the models to account for variation in flammability. Species of fynbos and IAPs generally exhibited greater flammability in the form of higher completeness of burn and more rapid ignition than species of thicket. Little distinction in flammability and fuel traits could be made between species of fynbos and IAPs, except that fynbos species had a greater proportion of fine fuels. Thicket species had higher proportions of coarse fuels and greater dry biomass (~fuel loading) than species of fynbos and IAPs. Live fuel moisture did not differ among the vegetation groups, contrary to the literature often ascribing variation in flammability to fuel moisture differences. The fuel traits investigated only explained 21-53% of the variation in flammability and large variation was evident among species within vegetation groups suggesting that species-specific and in situ community-level investigations are warranted, particularly in regard fuel moisture and chemical contents.


Assuntos
Queimaduras , Incêndios , Plantas , Biomassa , Temperatura , Espécies Introduzidas
4.
Nephrol Dial Transplant ; 36(8): 1474-1483, 2021 07 23.
Artigo em Inglês | MEDLINE | ID: mdl-32591783

RESUMO

BACKGROUND: Anti-CD20 B-cell depletion has not shown superior efficacy to standard immunosuppression in patients with systemic lupus erythematosus (SLE). Besides trial design, potential explanations are incomplete B-cell depletion in relation to substantial surges in B-cell-activating factor (BAFF). To improve B-cell targeting strategies, we conducted the first study in SLE patients aimed at investigating immunological effects and feasibility of combining rituximab (RTX; anti-CD20) and belimumab (BLM; anti-BAFF). METHODS: Reported is the long-term follow-up of a Phase 2 proof-of-concept study in 15 patients with SLE including 12 (80%) with lupus nephritis (LN). RESULTS: In 10/15 (67%) patients, a clinical response was observed by achievement of lupus low disease activity state, of which 8 (53%) continued treatment (BLM + ≤7.5 mg prednisolone) for the complete 2 years of follow-up. Five patients (33%) were referred to as 'non-responders' due to persistent LN, major flare or repetitive minor flares. Out of 12 LN patients, 9 (75%) showed a renal response including 8 (67%) complete renal responders. All anti-dsDNA+ patients converted to negative, and both anti-C1q and extractable nuclear antigen autoantibodies showed significant reductions. CD19+ B cells showed a median decrease from baseline of 97% at 24 weeks, with a persistent reduction of 84% up to 104 weeks. When comparing responders with non-responders, CD20+ B cells were depleted significantly less in non-responders and double-negative (DN) B cells repopulated significantly earlier. CONCLUSIONS: Combined B-cell targeted therapy with RTX and BLM prevented full B-cell repopulation including DN B cells, with concomitant specific reduction of SLE-relevant autoantibodies. The observed immunological and clinical benefits in a therapy-refractory SLE population prompt further studies on RTX + BLM.


Assuntos
Lúpus Eritematoso Sistêmico , Anticorpos Monoclonais Humanizados , Linfócitos B , Humanos , Imunomodulação , Lúpus Eritematoso Sistêmico/tratamento farmacológico , Rituximab/uso terapêutico
5.
PeerJ ; 8: e10161, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33240598

RESUMO

BACKGROUND: Globally, and in the Cape Floristic Region of South Africa, extreme fires have become more common in recent years. Such fires pose societal and ecological threats and have inter alia been attributed to climate change and modification of fuels due to alien plant invasions. Understanding the flammability of different types of indigenous and invasive alien vegetation is essential to develop fire risk prevention and mitigation strategies. We assessed the flammability of 30 species of indigenous and invasive alien plants commonly occurring in coastal fynbos and thicket shrublands in relation to varying fire weather conditions. METHODS: Fresh plant shoots were sampled and burnt experimentally across diverse fire weather conditions to measure flammability in relation to fire weather conditions, live fuel moisture, fuel load and vegetation grouping (fynbos, thicket and invasive alien plants). Flammability measures considered were: burn intensity, completeness of burn, time-to-ignition, and the likelihood of spontaneous ignition. We also investigated whether the drying of plant shoots (simulating drought conditions) differentially affected the flammability of vegetation groups. RESULTS: Fire weather conditions enhanced all measures of flammability, whereas live fuel moisture reduced burn intensity and completeness of burn. Live fuel moisture was not significantly correlated with fire weather, suggesting that the mechanism through which fire weather enhances flammability is not live fuel moisture. It furthermore implies that the importance of live fuel moisture for flammability of evergreen shrublands rests on inter-specific and inter-vegetation type differences in fuel moisture, rather than short-term intra-specific fluctuation in live fuel moisture in response to weather conditions. Fuel load significantly increased burn intensity, while reducing ignitability. Although fire weather, live fuel moisture, and fuel load had significant effects on flammability measures, vegetation and species differences accounted for most of the variation. Flammability was generally highest in invasive alien plants, intermediate in fynbos, and lowest in thicket. Fynbos ignited rapidly and burnt completely, whereas thicket was slow to ignite and burnt incompletely. Invasive alien plants were slow to ignite, but burnt with the highest intensity, potentially due to volatile organic composition. The drying of samples resulted in increases in all measures of flammability that were comparable among vegetation groups. Flammability, and by implication fire risk, should thus not increase disproportionately in one vegetation group compared to another under drought conditions-unless the production of dead fuels is disproportionate among vegetation groups. Thus, we suggest that the dead:live fuel ratio is a potentially useful indicator of flammability of evergreen shrublands and that proxies for this ratio need to be investigated for incorporation into fire danger indices.

6.
PeerJ ; 8: e9240, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32566395

RESUMO

It has been hypothesised that high-intensity fires prevent fire-dependent fynbos from being replaced by fire-avoiding subtropical thicket on dune landscapes of the Cape Floristic Region (CFR). Recent extensive fires provided an opportunity to test this hypothesis. We posit that (1) fire-related thicket shrub mortality would be size dependent, with smaller individuals suffering higher mortality than larger ones; and (2) that survival and resprouting vigour of thicket shrubs would be negatively correlated with fire severity. We assessed survival and resprouting vigour post-fire in relation to fire severity and pre-fire shrub size at two dune landscapes in the CFR. Fire severity was scored at the base of the shrub and categorised into four levels. Pre-fire size was quantified as an index of lignotuber diameter and stem count of each shrub. Resprouting vigour consisted of two variables; resprouting shoot count and resprouting canopy volume. A total of 29 species were surveyed. Post-fire survival of thicket was high (83-85%). We found that smaller shrubs did have a lower probability of post-fire survival than larger individuals but could detect no consistent relationship between shrub mortality and fire severity. Fire severity had a positive effect on resprouting shoot count but a variable effect on resprouting volume. Pre-fire size was positively related to survival and both measures of resprouting vigour. We conclude that thicket is resilient to high-severity fires but may be vulnerable to frequent fires. Prescribed high-intensity fires in dune landscapes are unlikely to reduce the extent of thicket and promote fynbos expansion.

7.
Proc Natl Acad Sci U S A ; 117(7): 3663-3669, 2020 02 18.
Artigo em Inglês | MEDLINE | ID: mdl-32029599

RESUMO

The ecological niche of a species describes the variation in population growth rates along environmental gradients that drives geographic range dynamics. Niches are thus central for understanding and forecasting species' geographic distributions. However, theory predicts that migration limitation, source-sink dynamics, and time-lagged local extinction can cause mismatches between niches and geographic distributions. It is still unclear how relevant these niche-distribution mismatches are for biodiversity dynamics and how they depend on species life-history traits. This is mainly due to a lack of the comprehensive, range-wide demographic data needed to directly infer ecological niches for multiple species. Here we quantify niches from extensive demographic measurements along environmental gradients across the geographic ranges of 26 plant species (Proteaceae; South Africa). We then test whether life history explains variation in species' niches and niche-distribution mismatches. Niches are generally wider for species with high seed dispersal or persistence abilities. Life-history traits also explain the considerable interspecific variation in niche-distribution mismatches: poorer dispersers are absent from larger parts of their potential geographic ranges, whereas species with higher persistence ability more frequently occupy environments outside their ecological niche. Our study thus identifies major demographic and functional determinants of species' niches and geographic distributions. It highlights that the inference of ecological niches from geographical distributions is most problematic for poorly dispersed and highly persistent species. We conclude that the direct quantification of ecological niches from demographic responses to environmental variation is a crucial step toward a better predictive understanding of biodiversity dynamics under environmental change.


Assuntos
Ecossistema , Proteaceae/crescimento & desenvolvimento , Biodiversidade , Demografia , Proteaceae/classificação , África do Sul
8.
Rheumatology (Oxford) ; 59(10): 2734-2745, 2020 10 01.
Artigo em Inglês | MEDLINE | ID: mdl-31951278

RESUMO

OBJECTIVES: SLE is a severe autoimmune disease characterized by autoreactive B cells and IC formation, which causes systemic inflammation. B cell-targeted therapy could be a promising treatment strategy in SLE patients; nevertheless, randomized clinical trials have not always been successful. However, some groups have demonstrated beneficial effects in severe SLE patients with off-label rituximab (RTX) with belimumab (BLM), or bortezomib (BTZ), which targeted different B cells subsets. This study assembled sera from SLE cohorts treated with RTX+BLM (n = 15), BTZ (n = 11) and RTX (n = 16) to get an in-depth insight into the immunological effects of these therapies on autoantibodies and IC formation. METHODS: Autoantibodies relevant for IC formation and the avidity of anti-dsDNA were determined by ELISA. IC-mediated inflammation was studied by complement levels and ex vivo serum-induced neutrophil extracellular trap formation. RESULTS: Reductions in autoantibodies were observed after all approaches, but the spectrum differed depending upon the treatment. Specifically, only RTX+BLM significantly decreased anti-C1q. Achieving seronegativity of ≥1 autoantibody, specifically anti-C1q, was associated with lower disease activity. In all SLE patients, the majority of anti-dsDNA autoantibodies had low avidity. RTX+BLM significantly reduced low-, medium- and high-avidity anti-dsDNA, while RTX and BTZ only significantly reduced medium avidity. IC-mediated inflammation, measured by C3 levels and neutrophil extracellular trap formation, improved after RTX+BLM and RTX but less after BTZ. CONCLUSION: This study demonstrated the impact of different B cell-targeted strategies on autoantibodies and IC formation and their potential clinical relevance in SLE.


Assuntos
Anticorpos Monoclonais Humanizados/farmacologia , Antineoplásicos Imunológicos/farmacologia , Antineoplásicos/farmacologia , Imunidade Humoral/efeitos dos fármacos , Lúpus Eritematoso Sistêmico/tratamento farmacológico , Adulto , Anticorpos Monoclonais Humanizados/uso terapêutico , Complexo Antígeno-Anticorpo/efeitos dos fármacos , Complexo Antígeno-Anticorpo/imunologia , Antineoplásicos/uso terapêutico , Antineoplásicos Imunológicos/uso terapêutico , Autoanticorpos/efeitos dos fármacos , Autoanticorpos/imunologia , Subpopulações de Linfócitos B/efeitos dos fármacos , Linfócitos B/imunologia , Bortezomib/farmacologia , Bortezomib/uso terapêutico , Proteínas do Sistema Complemento/imunologia , Quimioterapia Combinada , Armadilhas Extracelulares/efeitos dos fármacos , Feminino , Humanos , Imunossupressores/farmacologia , Imunossupressores/uso terapêutico , Lúpus Eritematoso Sistêmico/sangue , Lúpus Eritematoso Sistêmico/imunologia , Masculino , Pessoa de Meia-Idade , Projetos de Pesquisa , Rituximab/farmacologia , Rituximab/uso terapêutico
10.
Sci Data ; 6(1): 155, 2019 08 21.
Artigo em Inglês | MEDLINE | ID: mdl-31434899

RESUMO

Globe-LFMC is an extensive global database of live fuel moisture content (LFMC) measured from 1,383 sampling sites in 11 countries: Argentina, Australia, China, France, Italy, Senegal, Spain, South Africa, Tunisia, United Kingdom and the United States of America. The database contains 161,717 individual records based on in situ destructive samples used to measure LFMC, representing the amount of water in plant leaves per unit of dry matter. The primary goal of the database is to calibrate and validate remote sensing algorithms used to predict LFMC. However, this database is also relevant for the calibration and validation of dynamic global vegetation models, eco-physiological models of plant water stress as well as understanding the physiological drivers of spatiotemporal variation in LFMC at local, regional and global scales. Globe-LFMC should be useful for studying LFMC trends in response to environmental change and LFMC influence on wildfire occurrence, wildfire behavior, and overall vegetation health.


Assuntos
Folhas de Planta/fisiologia , Água , Incêndios Florestais , Algoritmos , Bases de Dados Factuais , Planeta Terra , Previsões , Tecnologia de Sensoriamento Remoto
11.
Arthritis Rheumatol ; 71(12): 2047-2058, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31313503

RESUMO

OBJECTIVE: Different studies have demonstrated that neutrophil extracellular traps (NETs) may be involved in the pathophysiology of both antineutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV) and systemic lupus erythematosus (SLE). AAV and SLE are clinically and pathologically divergent autoimmune diseases with different autoantibodies. However, the respective autoantigens recognized in AAV and SLE have been shown to be an intricate part of NETs. This study aimed to examine whether the mechanisms of NET formation and the composition of NETs are distinct between AAV and SLE. METHODS: To investigate this hypothesis, healthy neutrophils were stimulated with serum from patients with AAV (n = 80) and patients with SLE (n = 59), and the mechanisms of NET formation and NET composition were compared. RESULTS: Both patients with AAV and patients with SLE had excessive NET formation, which correlated with the extent of disease activity (in AAV r = 0.5, P < 0.0001; in SLE r = 0.35, P < 0.01). Lytic NET formation over several hours was observed in patients with AAV, as compared to rapid (within minutes), non-lytic NET formation coinciding with clustering of neutrophils in patients with SLE. AAV-induced NET formation was triggered independent of IgG ANCAs, whereas SLE immune complexes (ICx) induced NET formation through Fcγ receptor signaling. AAV-induced NET formation was dependent on reactive oxygen species and peptidyl arginine deaminases, and AAV-induced NETs were enriched for citrullinated histones (mean ± SEM 23 ± 2%). In contrast, SLE-induced NETs had immunogenic properties, including binding with high mobility group box chromosomal protein 1 (mean ± SEM 30 ± 3%) and enrichment for oxidized mitochondrial DNA, and were involved in ICx formation. CONCLUSION: The morphologic features, kinetics, induction pathways, and composition of excessive NET formation are all intrinsically distinct in AAV compared to SLE. Recognizing the diversity of NET formation between AAV and SLE provides a better understanding of the pathophysiologic role of NETs in these different autoimmune diseases.


Assuntos
Vasculite Associada a Anticorpo Anticitoplasma de Neutrófilos/fisiopatologia , Formação de Anticorpos/fisiologia , Armadilhas Extracelulares/fisiologia , Lúpus Eritematoso Sistêmico/fisiopatologia , Neutrófilos/imunologia , Adulto , Vasculite Associada a Anticorpo Anticitoplasma de Neutrófilos/imunologia , Autoanticorpos/imunologia , Autoantígenos/imunologia , Feminino , Humanos , Lúpus Eritematoso Sistêmico/imunologia , Masculino
12.
Lupus Sci Med ; 6(1): e000326, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31245016

RESUMO

OBJECTIVE: Because currently available assays that measure circulating immune complexes (ICx) are suboptimal, a novel assay was recently developed measuring C4d, a stable product of activation of the classical complement pathway. The present study aimed to establish the value of measuring plasma C4d levels in a longitudinal cohort of patients with severe refractory SLE who were treated with a combination therapy of rituximab with belimumab (RTX+BLM). METHODS: Fifteen patients with SLE who were treated with RTX+BLM in a phase 2A, open label study were included to sequentially measure plasma C4d levels and correlated to well-established markers of ICx-formation, that is, autoantibodies against double-stranded (ds) DNA, autoantibodies against C1q and proteinuria. The performance of plasma C4d measurements, C4 measurements and the ratio of C4d over C4 (C4d:C4) was evaluated. RESULTS: After establishing that on RTX+BLM treatment kinetics of C4d levels was distinct from traditional C3 and C4 levels, we found strong correlation of C4d:C4 with anti-dsDNA (R=0.76, p<0.001) and anti-C1q (R=0.65, p<0.001) autoantibody levels, which outperformed both stand-alone C4 and C4d levels. Additionally, changes in C4d:C4 over time correlated strongly with changes in proteinuria (R=0.59, p<0.001) as well as anti-dsDNA (R=0.46, p=0.003) and anti-C1q (R=0.47, p=0.002). CONCLUSION: In patients with severe SLE, plasma C4d levels in relation to C4 levels is useful for longitudinal monitoring after RTX+BLM treatment to reflect amelioration of classical complement activation by ICx as well as proteinuria.

13.
J Vis Exp ; (143)2019 01 29.
Artigo em Inglês | MEDLINE | ID: mdl-30774133

RESUMO

Neutrophil extracellular traps (NETs) are immunogenic extracellular DNA structures that can be released by neutrophils upon a wide variety of triggers. NETs have been demonstrated to serve as an important host defense mechanism that traps and kills microorganisms. On the other hand, they have been implicated in diverse systemic autoimmune diseases. NETs are immunogenic and toxic structures that contain a pool of relevant autoantigens including anti-neutrophil cytoplasmic antibodies (ANCA)-associated vasculitis (AAV) and systemic lupus erythematosus (SLE). Different forms of NETs can be induced depending on the stimulus. The amount of NETs can be quantified using different techniques including measuring DNA release in supernatants, measuring DNA-complexed with NET-molecules like myeloperoxidase (MPO) or neutrophil elastase (NE), measuring the presence of citrullinated histones by fluorescence microscopy, or flow cytometric detection of NET-components which all have different features regarding their specificity, sensitivity, objectivity, and quantity. Here is a protocol to quantify ex vivo NET formation in a highly-sensitive, high-throughput manner by using three-dimensional immunofluorescence confocal microscopy. This protocol can be applied to address various research questions about NET formation and degradation in health and disease.


Assuntos
Armadilhas Extracelulares/metabolismo , Ensaios de Triagem em Larga Escala/métodos , Neutrófilos/imunologia , Humanos
14.
Nat Ecol Evol ; 2(12): 1925-1932, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30374174

RESUMO

Herbivores alter plant biodiversity (species richness) in many of the world's ecosystems, but the magnitude and the direction of herbivore effects on biodiversity vary widely within and among ecosystems. One current theory predicts that herbivores enhance plant biodiversity at high productivity but have the opposite effect at low productivity. Yet, empirical support for the importance of site productivity as a mediator of these herbivore impacts is equivocal. Here, we synthesize data from 252 large-herbivore exclusion studies, spanning a 20-fold range in site productivity, to test an alternative hypothesis-that herbivore-induced changes in the competitive environment determine the response of plant biodiversity to herbivory irrespective of productivity. Under this hypothesis, when herbivores reduce the abundance (biomass, cover) of dominant species (for example, because the dominant plant is palatable), additional resources become available to support new species, thereby increasing biodiversity. By contrast, if herbivores promote high dominance by increasing the abundance of herbivory-resistant, unpalatable species, then resource availability for other species decreases reducing biodiversity. We show that herbivore-induced change in dominance, independent of site productivity or precipitation (a proxy for productivity), is the best predictor of herbivore effects on biodiversity in grassland and savannah sites. Given that most herbaceous ecosystems are dominated by one or a few species, altering the competitive environment via herbivores or by other means may be an effective strategy for conserving biodiversity in grasslands and savannahs globally.


Assuntos
Biodiversidade , Pradaria , Herbivoria , Mamíferos/fisiologia , Plantas , Animais , Clima Desértico
15.
PeerJ ; 6: e5466, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30155363

RESUMO

BACKGROUND: Invasive alien plants with long-lived dormant seed banks and fast growth rates are difficult to manage. Acacia mearnsii and Acacia melanoxylon are two such invaders in the southern Cape of South Africa which occasionally co-occur with a native, ecologically analogous species, Virgilia divaricata. We compared the performance of these three species to determine potential for the native species to be used in management of the invasives. METHODS: We compared the study species in terms of (i) soil seed bank densities, their vertical distribution, and the viability of seeds underneath the canopies of mature trees; (ii) seedling growth from planted seeds over a period of three months; and (iii) growth rates of saplings over a period of 10 months in stands that have naturally regenerated in the field (these stands were dominated by A. mearnsii) and where saplings have been exposed to varying levels of competition from surrounding saplings. RESULTS: Seed bank densities differed significantly among species but not among soil depth classes. Acacia mearnsii had the highest seed bank densities (mean of 7,596 seeds m-2), followed by V. divaricata (938 seeds m-2) and A. melanoxylon (274 seeds m-2). Seed viability was high (87-91%) in all three study species and did not differ significantly among species or soil depth classes. As seedlings, V. divaricata significantly outgrew A. mearnsii in terms of height, root and shoot dry mass, and root:shoot ratio. Relative growth (the relationship between growth in height and initial height) was negative in the seedlings of both species. Trends during the sapling stage were opposite to those during the seedling stage; A. mearnsii (but not A. melanoxylon) saplings significantly outgrew V. divaricata saplings in height, while relative growth rates were positive in all species. Sapling growth of all species was furthermore uninfluenced by the collective biomass of surrounding competitors. DISCUSSION: Our findings suggest that amongst the measures considered, A. mearnsii's success as an invader is primarily attributable to its large seed banks, and secondly to its vigorous growth in height as saplings. However, the superior growth performance of V. divaricata seedlings and no apparent negative effect of competition from the acacias on sapling growth show promise for its use in integrated management of the acacias.

16.
J Autoimmun ; 91: 45-54, 2018 07.
Artigo em Inglês | MEDLINE | ID: mdl-29636274

RESUMO

OBJECTIVE: In systemic lupus erythematosus (SLE) patients, excessive formation of neutrophil extracellular traps (NETs) is observed and their degradation is impaired. In vitro, immune complexes (ICx) trigger NET formation while NET-derived DNA is a postulated autoantigen for anti-nuclear autoantibodies (ANAs), found in SLE. Based on these self-perpetuating mechanisms in SLE, this study investigates whether interfering with ICx formation using a combination of rituximab (RTX) and belimumab (BLM) could decrease NET formation and ameliorate disease. METHODS: A phase 2A, open-label, single arm proof-of-concept study was performed wherein 16 SLE patients with severe, refractory disease were treated with a combination of CD20-mediated B-cell depletion with rituximab and sustained inhibition of B-cell activating factor BlyS with belimumab. Besides safety, the study's endpoints were chosen to address the concept of autoantibodies in relation to excessive NET formation. RESULTS: We demonstrated a surge of BlyS levels upon RTX-mediated B-cell depletion which was abrogated by subsequent BLM treatment. As such, therapeutic intervention with RTX + BLM led to specific reductions in ANAs and regression of excessive NET formation. RTX + BLM appeared to be safe and achieved clinically significant responses: low lupus disease activity state was achieved in 10 patients, renal responses in 11 patients and concomitant immunosuppressive medication was tapered in 14 out of the 16 patients. CONCLUSIONS: This study provides novel insights into clinical beneficence of reducing excessive NET formation in SLE by therapeutic targeting ANA production with RTX + BLM. Altogether putting forward a new treatment concept that specifically ameliorates underlying SLE pathophysiology. TRIAL REGISTRATION: ClinicalTrials.gov NCT02284984.


Assuntos
Anticorpos Monoclonais Humanizados/uso terapêutico , Autoanticorpos/sangue , Armadilhas Extracelulares/metabolismo , Imunoterapia/métodos , Lúpus Eritematoso Sistêmico/tratamento farmacológico , Neutrófilos/imunologia , Rituximab/uso terapêutico , Adulto , Complexo Antígeno-Anticorpo/metabolismo , Células Cultivadas , DNA/imunologia , Progressão da Doença , Quimioterapia Combinada , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Adulto Jovem
17.
Kidney Int ; 94(1): 139-149, 2018 07.
Artigo em Inglês | MEDLINE | ID: mdl-29606398

RESUMO

Neutrophil extracellular traps (NETs) are auto-antigenic strands of extracellular DNA covered with myeloperoxidase (MPO) and proteinase3 (PR3) that can be a source for the formation of anti-neutrophil cytoplasmic autoantibodies (ANCAs). The presence of NETs was recently demonstrated in renal tissue of patients with ANCA-associated vasculitis (AAV). NET formation was enhanced in AAV, suggesting that MPO-ANCA could trigger NET formation, supporting a vicious circle placing NETs in the center of AAV pathogenesis. Here we investigated NET formation in 99 patients with AAV by a novel highly sensitive and automated assay. There was a significant excess of ex vivo NET formation in both MPO-ANCA- and PR3-ANCA-positive patients with AAV compared to healthy individuals. Excessive NET formation did not correlate with serum ANCA levels. Likewise, immunoglobulin G depletion had no effect on excessive NET formation in patients with AAV, indicating an ANCA-independent process. Next, we explored the relation of excessive NET formation to clinical disease in ten patients with AAV and showed that excessive NET formation was predominantly found during active disease, more so than during remission. Excessive NET formation was found in patients with AAV hospitalized for disease relapse but not during severe infection. Thus, excessive NET formation in AAV is independent of ANCA, and an excess of ex vivo NET formation was related to active clinical disease in patients with AAV and a marker of autoimmunity rather than infection.


Assuntos
Vasculite Associada a Anticorpo Anticitoplasma de Neutrófilos/imunologia , Autoimunidade , Armadilhas Extracelulares/imunologia , Adulto , Vasculite Associada a Anticorpo Anticitoplasma de Neutrófilos/sangue , Anticorpos Anticitoplasma de Neutrófilos/sangue , Anticorpos Anticitoplasma de Neutrófilos/imunologia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Estudos Retrospectivos
18.
Kidney Int ; 93(1): 214-220, 2018 01.
Artigo em Inglês | MEDLINE | ID: mdl-28950993

RESUMO

In 2012, the Systemic Lupus International Collaborating Clinics (SLICC) presented a new classification for systemic lupus erythematosus (SLE). In this classification, biopsy-confirmed lupus nephritis with positive antinuclear or anti-double-stranded DNA antibodies became a stand-alone criterion. Because of the unknown diagnostic performance among patients from nephrology clinics, we aimed to test the validity of the SLICC classification, compared with the American College of Rheumatology classification, in a cohort of patients whose renal biopsies would raise the clinicopathologic suspicion of lupus nephritis. All patients with a renal biopsy showing full house glomerular deposits and clinical follow-up in our center were included and reevaluated, after which clinicians and a pathologist reached a consensus on the reference-standard clinical diagnosis of SLE. The diagnostic performance and net reclassification improvement were assessed in 149 patients, 117 of whom had clinical SLE. Compared with the American College of Rheumatology classification, the SLICC classification had better sensitivity (100 vs. 94%); although, this was at the expense of specificity (91 vs. 100%; net reclassification improvement -0.03). Excluding the stand-alone renal criterion, the specificity of the SLICC classification reached 100%, with a significant net reclassification improvement of 0.06 compared with the American College of Rheumatology classification. The SLICC classification performed well in terms of diagnostic sensitivity among patients with full house glomerular deposits; whereas, the stand-alone renal criterion had no additional value and compromised the specificity. Thus, presumed patients with lupus nephritis in nephrology clinics reflect a distinct SLE disease spectrum warranting caution when applying SLE classification criteria.


Assuntos
Técnicas de Apoio para a Decisão , Glomérulos Renais/patologia , Nefrite Lúpica/patologia , Adulto , Anticorpos Antinucleares/imunologia , Biópsia , Feminino , Imunofluorescência , Humanos , Glomérulos Renais/imunologia , Lúpus Eritematoso Sistêmico/diagnóstico , Lúpus Eritematoso Sistêmico/imunologia , Nefrite Lúpica/classificação , Nefrite Lúpica/imunologia , Masculino , Pessoa de Meia-Idade , Valor Preditivo dos Testes , Prognóstico , Reprodutibilidade dos Testes , Adulto Jovem
19.
PeerJ ; 5: e3591, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28828239

RESUMO

Season of fire has marked effects on floristic composition in fire-prone Mediterranean-climate shrublands. In these winter-rainfall systems, summer-autumn fires lead to optimal recruitment of overstorey proteoid shrubs (non-sprouting, slow-maturing, serotinous Proteaceae) which are important to the conservation of floral diversity. We explored whether fire season has similar effects on early establishment of five proteoid species in the eastern coastal part of the Cape Floral Kingdom (South Africa) where rainfall occurs year-round and where weather conducive to fire and the actual incidence of fire are largely aseasonal. We surveyed recruitment success (ratio of post-fire recruits to pre-fire parents) of proteoids after fires in different seasons. We also planted proteoid seeds into exclosures, designed to prevent predation by small mammals and birds, in cleared (intended to simulate fire) fynbos shrublands at different sites in each of four seasons and monitored their germination and survival to one year post-planting (hereafter termed 'recruitment'). Factors (in decreasing order of importance) affecting recruitment success in the post-fire surveys were species, pre-fire parent density, post-fire age of the vegetation at the time of assessment, and fire season, whereas rainfall (for six months post-fire) and fire return interval (>7 years) had little effect. In the seed-planting experiment, germination occurred during the cooler months and mostly within two months of planting, except for summer-plantings, which took 2-3 months longer to germinate. Although recruitment success differed significantly among planting seasons, sites and species, significant interactions occurred among the experimental factors. In both the post-fire surveys and seed planting experiment, recruitment success in relation to fire- or planting season varied greatly within and among species and sites. Results of these two datasets were furthermore inconsistent, suggesting that proteoid recruitment responses are not related to the season of fire. Germination appeared less rainfall-dependent than in winter-rainfall shrublands, suggesting that summer drought-avoiding dormancy is limited and has less influence on variation in recruitment success among fire seasons. The varied response of proteoid recruitment to fire season (or its simulation) implies that burning does not have to be restricted to particular seasons in eastern coastal fynbos, affording more flexibility for fire management than in shrublands associated with winter rainfall.

20.
Nephrol Dial Transplant ; 32(4): 654-662, 2017 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-28340077

RESUMO

Background: Full-house immunofluorescence in combination with various histopathologic lesions in the renal biopsies of patients without overt systemic lupus erythematosus (SLE) poses a diagnostic challenge. In this setting, the biopsy findings are sometimes termed non-lupus 'full-house nephropathy' (FHN). It is presently unknown whether idiopathic non-lupus FHN is clinicopathologically and prognostically distinct from lupus FHN. Methods: We included non-lupus FHN patients and lupus FHN controls (four or more American College of Rheumatology or Systemic Lupus International Collaborating Clinics criteria) who were biopsied between 1968 and 2014 at the Leiden University Medical Centre. Non-lupus FHN patients were studied for progression to SLE and/or the presence of other conditions with FHN. The clinicopathologic characteristics and prognosis of idiopathic non-lupus FHN patients were compared with those of lupus FHN patients. Results: Of 149 included patients, 32 had non-lupus FHN. During the median follow-up of 20 years, no non-lupus FHN patients developed SLE. In all, 20 non-lupus FHN patients had idiopathic non-lupus FHN, and in 12 patients, secondary non-lupus FHN was considered due to membranous nephropathy (anti-PLA2R-positive, n = 1; cancer-associated, n = 3), IgA nephropathy ( n = 4), infection-related glomerulonephritis ( n = 2) or anti-neutrophil cytoplasmic antibody-associated glomerulonephritis ( n = 2). Idiopathic non-lupus FHN patients were more often male (P < 0.001) than lupus FHN patients and their renal biopsies more often showed a mesangial (P = 0.04) or membranous pattern of injury (P = 0.02) and less intense C1q staining (P = 0.002). Clinically, they presented with lower-range erythrocyturia (P = 0.04), more proteinuria (P < 0.01) and less complement consumption in the classical pathway (P < 0.001) than lupus FHN patients. By multivariable Cox regression analysis of patients with a lupus nephritis class III/IV pattern of injury, idiopathic non-lupus FHN compared with lupus FHN was an independent risk factor for end-stage renal disease [hazard ratio 5.31 (95% confidence interval 1.47-19.24)]. Conclusions: Our results show that the clinical recognition of idiopathic non-lupus FHN as a diagnostic category is critical.


Assuntos
Glomerulonefrite por IGA/etiologia , Glomerulonefrite Membranosa/etiologia , Glomerulonefrite/etiologia , Lúpus Eritematoso Sistêmico/complicações , Nefrite Lúpica/etiologia , Adolescente , Adulto , Idoso , Estudos de Casos e Controles , Progressão da Doença , Feminino , Imunofluorescência , Glomerulonefrite/patologia , Glomerulonefrite por IGA/patologia , Glomerulonefrite Membranosa/patologia , Humanos , Nefrite Lúpica/patologia , Masculino , Pessoa de Meia-Idade , Prognóstico , Adulto Jovem
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