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1.
J Cereb Blood Flow Metab ; : 271678X241238843, 2024 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-38477254

RESUMO

Neurovascular coupling (NVC) is the functional hyperemia of the brain responding to local neuronal activity. It is mediated by astrocytes and affected by subcortical ascending pathways in the cortex that convey information, such as sensory stimuli and the animal condition. Here, we investigate the influence of the raphe serotonergic system, a subcortical ascending arousal system in animals, on the modulation of cortical NVC and cerebral blood flow (CBF). Raphe serotonergic neurons were optogenically activated for 30 s, which immediately awakened the mice from non-rapid eye movement sleep. This caused a biphasic cortical hemodynamic change: a transient increase for a few seconds immediately after photostimulation onset, followed by a large progressive decrease during the stimulation period. Serotonergic neuron activation increased intracellular Ca2+ levels in cortical pyramidal neurons and astrocytes, demonstrating its effect on the NVC components. Pharmacological inhibition of cortical neuronal firing activity and astrocyte metabolic activity had small hypovolemic effects on serotonin-induced biphasic CBF changes, while blocking 5-HT1B receptors expressed primarily in cerebral vasculature attenuated the decreasing CBF phase. This suggests that serotonergic neuron activation leading to animal awakening could allow the NVC to exert a hyperemic function during a biphasic CBF response, with a predominant decrease in the cortex.

2.
Int J Stem Cells ; 17(1): 80-90, 2024 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-37822280

RESUMO

Cellular senescence causes cell cycle arrest and promotes permanent cessation of proliferation. Since the senescence of mesenchymal stem cells (MSCs) reduces proliferation and multipotency and increases immunogenicity, aged MSCs are not suitable for cell therapy. Therefore, it is important to inhibit cellular senescence in MSCs. It has recently been reported that metabolites can control aging diseases. Therefore, we aimed to identify novel metabolites that regulate the replicative senescence in MSCs. Using a fecal metabolites library, we identified nervonic acid (NA) as a candidate metabolite for replicative senescence regulation. In replicative senescent MSCs, NA reduced senescence-associated ß-galactosidase positive cells, the expression of senescence-related genes, as well as increased stemness and adipogenesis. Moreover, in non-senescent MSCs, NA treatment delayed senescence caused by sequential subculture and promoted proliferation. We confirmed, for the first time, that NA delayed and inhibited cellular senescence. Considering optimal concentration, duration, and timing of drug treatment, NA is a novel potential metabolite that can be used in the development of technologies that regulate cellular senescence.

3.
Front Plant Sci ; 14: 1183406, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37469771

RESUMO

The family Schisandraceae is a basal angiosperm plant group distributed in East and Southeast Asia and includes many medicinal plant species such as Schisandra chinensis. In this study, mitochondrial genomes (mitogenomes) of two species, Schisandra repanda and Kadsura japonica, in the family were characterized through de novo assembly using sequencing data obtained with Oxford Nanopore and Illumina sequencing technologies. The mitogenomes of S. repanda were assembled into one circular contig (571,107 bp) and four linear contigs (10,898-607,430 bp), with a total of 60 genes: 38 protein-coding genes (PCGs), 19 tRNA genes, and 3 rRNA genes. The mitogenomes of K. japonica were assembled into five circular contigs (211,474-973,503 bp) and three linear contigs (8,010-72,712 bp), with a total of 66 genes: 44 PCGs, 19 tRNA genes, and 3 rRNA genes. The mitogenomes of the two species had complex structural features with high repeat numbers and chloroplast-derived sequences, as observed in other plant mitogenomes. Phylogenetic analysis based on PCGs revealed the taxonomical relationships of S. repanda and K. japonica with other species from Schisandraceae. Finally, molecular markers were developed to distinguish between S. repanda, K. japonica, and S. chinensis on the basis of InDel polymorphisms present in the mitogenomes. The mitogenomes of S. repanda and K. japonica will be valuable resources for molecular and taxonomic studies of plant species that belong to the family Schisandraceae.

4.
iScience ; 26(1): 105830, 2023 Jan 20.
Artigo em Inglês | MEDLINE | ID: mdl-36713262

RESUMO

The central serotonergic system has multiple roles in animal physiology and behavior, including sleep-wake control. However, its function in controlling brain energy metabolism according to the state of animals remains undetermined. Through in vivo monitoring of energy metabolites and signaling, we demonstrated that optogenetic activation of raphe serotonergic neurons increased cortical neuronal intracellular concentration of ATP, an indispensable cellular energy molecule, which was suppressed by inhibiting neuronal uptake of lactate derived from astrocytes. Raphe serotonergic neuronal activation induced cortical astrocytic Ca2+ and cAMP surges and increased extracellular lactate concentrations, suggesting the facilitation of lactate release from astrocytes. Furthermore, chemogenetic inhibition of raphe serotonergic neurons partly attenuated the increase in cortical neuronal intracellular ATP levels as arousal increased in mice. Serotonergic neuronal activation promoted an increase in cortical neuronal intracellular ATP levels, partly mediated by the facilitation of the astrocyte-neuron lactate shuttle, contributing to state-dependent optimization of neuronal intracellular energy levels.

5.
J Nutr Biochem ; 111: 109173, 2023 01.
Artigo em Inglês | MEDLINE | ID: mdl-36228975

RESUMO

The antidiabetic effects of green tea have been demonstrated in clinical trials and epidemiological studies. This study investigated the antidiabetic effects of green tea extract (GTE) and its underlying molecular mechanisms using a leptin receptor-deficient db/db mouse model (Leprdb/db). Treatment with GTE for 2 weeks improved glucose tolerance and insulin sensitivity in Leprdb/db mice. In addition, GTE treatment reduced the body weight and adiposity of Leprdb/db mice. Furthermore, GTE treatment reduced pro-inflammatory gene expression, including nuclear factor kappa B (NF-κB) in white adipose tissue (WAT), and also reduced dipeptidyl peptidase-4 (DPP4) expression levels in WAT as well as in the serum. The promoter region of Dpp4 contains the NF-κB binding site, and DPP4 was found to be a direct target of NF-κB. Consistently, in vitro treatment of cells with GTE or its main constituent epigallocatechin gallate reduced lipopolysaccharide-induced NF-κB/DPP4 expression in 3T3-L1 adipocytes and RAW264.7 cells. Overall, our data demonstrated that GTE exerts an anti-diabetic effect by regulating the expression levels of NF-κB and DPP4 in WAT.


Assuntos
Dipeptidil Peptidase 4 , Hipoglicemiantes , Camundongos , Animais , Hipoglicemiantes/farmacologia , Hipoglicemiantes/uso terapêutico , Hipoglicemiantes/metabolismo , Dipeptidil Peptidase 4/genética , Dipeptidil Peptidase 4/metabolismo , NF-kappa B/metabolismo , Extratos Vegetais/uso terapêutico , Tecido Adiposo/metabolismo , Chá/química
6.
J Nurs Manag ; 30(8): 4461-4471, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-36326092

RESUMO

AIM: This study explored how ethically competent nurses behave in clinical nursing practice. BACKGROUND: Nurses' ethical competency is crucial in nursing practice as it promotes patients' safety and quality of care. METHODS: Using a purposive sampling technique, 20 clinical nurses in South Korea were interviewed via an online video platform. The data were analysed using a thematic analysis based on phenomenological approach. RESULTS: The main theme found among the participating nurses' ethical competency was caring beyond egocentrism, with two subthemes: (1) patient-centred care based on compassion and (2) responsible behaviour based on nursing professionalism. Factors that enabled this included (1) reasonable work conditions, (2) interpersonal relationships, and (3) nurses' rich personal experiences. CONCLUSIONS: Nurses' ethical competency depends on how far they can move away from their own egocentrism and act for their clients' benefit, wherein an appropriate workload and warm human relationships with one's colleagues are essential. Nurses should thus receive education on ethics and professionalism and participate in volunteer and leisure activities that cultivate their degree of empathy. IMPLICATION FOR NURSING MANAGEMENT: Nursing leaders and managers should understand nurses' ethical competency and its enabling factors to devise effective strategies to promote it.


Assuntos
Ética em Enfermagem , Enfermeiras e Enfermeiros , Humanos , Pesquisa Qualitativa , República da Coreia , Relações Interpessoais
7.
Int J Biol Macromol ; 222(Pt B): 3001-3013, 2022 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-36244531

RESUMO

The leakage issue and inferior heat conduction of organic phase change materials (PCMs) limit their actual applications. In the present study, cellulose nanofibril (CNF)-based foams were prepared as the porous scaffolds for polyethylene glycol (PEG) and paraffin wax (Pw) to prevent their leakage, and multiwalled carbon nanotubes (CNTs) were incorporated to improve the heat transfer performance. The prepared foams had low density (<67.3 kg/m3) and high porosity (>94.5 %). Selective chemical modifications of nanocellulose foams enhanced their shape-stability and compatibility with PCMs. The highly porous foam structure and favorable compatibility resulted in high PCM loading levels (93.63 % for PEG and 91.77 % for Pw) and negligible PCM leakage (<2 %). CNTs improved the heat transfer performance of PCMs, as evidenced by the improved thermal conductivities and boosted temperature rises during solar heating. Meanwhile, the composite PCMs exhibited improved thermal stability over the control. PEG-based composite PCM exhibited a phase change enthalpy of 143 kJ/kg with a melting temperature of 25.2 °C; Pw-based composite PCM exhibited a phase change enthalpy of 184 kJ/kg with a melting temperature of 53.4 °C. Novel PCM sandwich structures based on these composite PCMs and a thermoelectric generator were designed and displayed promising potential for solar energy harvesting and utilization.


Assuntos
Temperatura Alta , Nanotubos de Carbono , Celulose , Condutividade Térmica , Termodinâmica , Parafina/química , Aerossóis
8.
Environ Sci Pollut Res Int ; 29(40): 60584-60599, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35420340

RESUMO

Nonwoven products are widely used in disposable products, such as wipes, diapers, and masks. Microfibers shed from these products in the aquatic and air environment have not been fully described. In the present study, 15 commercial single-use nonwoven products (wipes) and 16 meltblown nonwoven materials produced in a pilot plant were investigated regarding their microfiber generation in aquatic and air environments and compared to selected textile materials and paper tissue materials. Microfibers shed in water were studied using a Launder Ometer equipment (1-65 mg of microfibers per gram material), and microfibers shed in air were evaluated using a dusting testing machine that shakes a piece of the nonwoven back and forth (~ 4 mg of microfibers per gram material). The raw materials and bonding technologies affected the microfiber generation both in water and air conditions. When the commercial nonwovens contained less natural cellulosic fibers, less microfibers were generated. Bonding with hydroentangling and/or double bonding by two different bonding methods could improve the resistance to microfiber generation. Meltblown nonwoven fabrics generated fewer microfibers compared to the other commercial nonwovens studied here, and the manufacturing factors, such as DCD (die-to-collector distance) and air flow rate, affected the tendency of microfiber generation. The results suggest that it is possible to control the tendency of microfiber shedding through the choice of operating parameters during nonwoven manufacturing processes.


Assuntos
Têxteis , Poluentes Químicos da Água , Águas Residuárias , Água , Poluentes Químicos da Água/análise
9.
BMC Genomics ; 23(1): 17, 2022 Jan 08.
Artigo em Inglês | MEDLINE | ID: mdl-34996357

RESUMO

BACKGROUND: Schisandra chinensis, an ancient member of the most basal angiosperm lineage which is known as the ANITA, is a fruit-bearing vine with the pharmacological effects of a multidrug system, such as antioxidant, anti-inflammatory, cardioprotective, neuroprotective, anti-osteoporosis effects. Its major bioactive compound is represented by lignans such as schisandrin. Molecular characterization of lignan biosynthesis in S. chinensis is of great importance for improving the production of this class of active compound. However, the biosynthetic mechanism of schisandrin remains largely unknown. RESULTS: To understand the potential key catalytic steps and their regulation of schisandrin biosynthesis, we generated genome-wide transcriptome data from three different tissues of S. chinensis cultivar Cheongsoon, including leaf, root, and fruit, via long- and short-read sequencing technologies. A total of 132,856 assembled transcripts were generated with an average length of 1.9 kb and high assembly completeness. Overall, our data presented effective, accurate gene annotation in the prediction of functional pathways. In particular, the annotation revealed the abundance of transcripts related to phenylpropanoid biosynthesis. Remarkably, transcriptome profiling during fruit development of S. chinensis cultivar Cheongsoon revealed that the phenylpropanoid biosynthetic pathway, specific to coniferyl alcohol biosynthesis, showed a tendency to be upregulated at the postfruit development stage. Further the analysis also revealed that the pathway forms a transcriptional network with fruit ripening-related genes, especially the ABA signaling-related pathway. Finally, candidate unigenes homologous to isoeugenol synthase 1 (IGS1) and dirigent-like protein (DIR), which are subsequently activated by phenylpropanoid biosynthesis and thus catalyze key upstream steps in schisandrin biosynthesis, were identified. Their expression was increased at the postfruit development stage, suggesting that they may be involved in the regulation of schisandrin biosynthesis in S. chinensis. CONCLUSIONS: Our results provide new insights into the production and accumulation of schisandrin in S. chinensis berries and will be utilized as a valuable transcriptomic resource for improving the schisandrin content.


Assuntos
Lignanas , Schisandra , Antioxidantes , Frutas/química , Frutas/genética , Lignanas/análise , Transcriptoma
10.
Front Plant Sci ; 12: 716782, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34745157

RESUMO

The taproot of radish (Raphanus sativus L.) is an important sink organ; it is morphologically diverse and contains large amounts of secondary metabolites. Sucrose metabolism is believed to be important in the development of sink organs. We measured the amounts of glucose, fructose, and sucrose in the roots of sixty three radish accessions and analyzed the association between the sugar content and the root phenotype. Fructose content correlated with the root color and length characteristics, glucose was the most abundant sugar in the roots, and the sucrose content was very low, compared to that of the hexoses in most of the accessions. Expression analysis of the genes involved in sucrose metabolism, transportation, starch synthesis, and cell wall synthesis was performed through RNA sequencing. The genes encoding sucrose synthases (SUSY) and the enzymes involved in the synthesis of cellulose were highly expressed, indicating that SUSY is involved in cell wall synthesis in radish roots. The positive correlation coefficient (R) between the sucrose content and the expression of cell wall invertase and sugar transporter proteins suggest that hexose accumulation could occur through the apoplastic pathway in radish roots. A positive R score was also obtained when comparing the expression of genes encoding SUSY and fructokinase (FK), suggesting that the fructose produced by SUSY is mostly phosphorylated by FK. In addition, we concluded that sucrose was the most metabolized sugar in radish roots.

11.
Carbohydr Polym ; 273: 118585, 2021 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-34560986

RESUMO

The leakage and low thermal conductivity of paraffin phase change material (PCM) must be addressed to achieve a more efficient energy storage process. In this study, cellulose nanofibril (CNF) foams were prepared as the porous support of paraffin to prevent its leakage, and multiwalled carbon nanotubes (CNTs) were incorporated in the foams to improve heat transfer performance. Treatment of CNF with methyltrimethoxysilane improved compatibility between the foams and paraffin. The prepared highly porous (porosity >96%) foams had paraffin absorption capacities exceeding 90%. The form-stable PCM composites displayed negligible paraffin leakage and had a compact structure. The prepared PCM composites had enhanced heat transfer performance, reasonable phase change properties and thermal stabilities. The enthalpy of the SCNF/CNT50-Pw PCM composite decreased by 6% after 100 melting/freezing cycles. Compared with pristine paraffin, the PCM composites exhibited superior form-stabilities and improved thermal properties, which suggested application in a solar-thermal-electricity energy harvesting and conversion system.

12.
Cell Rep ; 36(4): 109427, 2021 07 27.
Artigo em Inglês | MEDLINE | ID: mdl-34320360

RESUMO

An artificial tool for manipulating local cerebral blood flow (CBF) is necessary for understanding how CBF controls brain function. Here, we generate vascular optogenetic tools whereby smooth muscle cells and endothelial cells express optical actuators in the brain. The illumination of channelrhodopsin-2 (ChR2)-expressing mice induces a local reduction in CBF. Photoactivated adenylyl cyclase (PAC) is an optical protein that increases intracellular cyclic adenosine monophosphate (cAMP), and the illumination of PAC-expressing mice induces a local increase in CBF. We target the ventral striatum, determine the temporal kinetics of CBF change, and optimize the illumination intensity to confine the effects to the ventral striatum. We demonstrate the utility of this vascular optogenetic manipulation in freely and adaptively behaving mice and validate the task- and actuator-dependent behavioral readouts. The development of vascular optogenetic animal models will help accelerate research linking vasculature, circuits, and behavior to health and disease.


Assuntos
Encéfalo/irrigação sanguínea , Circulação Cerebrovascular/fisiologia , Movimento , Optogenética , Animais , Arteríolas/metabolismo , Comportamento Animal , Capilares/metabolismo , Channelrhodopsins/metabolismo , Células Endoteliais/metabolismo , Camundongos Endogâmicos C57BL , Miócitos de Músculo Liso/metabolismo , Neurônios/metabolismo , Fatores de Tempo , Vênulas/metabolismo
13.
Int J Biol Macromol ; 174: 402-412, 2021 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-33529630

RESUMO

Salt hydrate phase change materials (PCMs) possess the challenge of supercooling, which must be addressed to allow more efficient energy storage and utilisation. In this work, cellulose nanofibril (CNF), a versatile biopolymer was used to support and disperse silver nanoparticles (AgNPs), and the synthesised CNF/AgNPs composite was used to improve the performance of sodium acetate trihydrate (SAT). Results showed that CNF dispersed the AgNPs uniformly and prevented their aggregation. Through the synergistic effect of 1% CNF/AgNPs and 2% sodium phosphate dibasic dodecahydrate, a low supercooling degree of 1.2 °C was achieved. Moreover, AgNPs were uniformly distributed in the prepared PCM composite. Differential scanning calorimetry results indicated that the prepared PCM@CNF/AgNPs 0.02 composite showed a similar melting point (57.4 °C) and enthalpy (269 kJ/kg), compared to those of pure SAT. Thermogravimetric analysis showed that the PCM composite did not lose all moisture until a heating temperature of 160 °C, showing improved thermal stability. The thermal conductivity of PCM@CNF/AgNPs 0.02 composite was 31.6% higher than that of SAT. The enthalpy of this composite decreased only around 2% after 100 melting/freezing cycles, showing satisfying thermal reliability. This composite can therefore be used to fabricate high-performance TES systems with negligible supercooling and improved thermal properties.


Assuntos
Celulose/química , Nanopartículas Metálicas/química , Nanocompostos/química , Prata/química , Varredura Diferencial de Calorimetria , Teste de Materiais , Nanofibras/química , Nanopartículas/química , Acetato de Sódio/química , Condutividade Térmica
14.
Stem Cells ; 2020 Oct 27.
Artigo em Inglês | MEDLINE | ID: mdl-33107705

RESUMO

In the peripheral nervous system (PNS), proper development of Schwann cells (SCs) contributing to axonal myelination is critical for neuronal function. Impairments of SCs or neuronal axons give rise to several myelin-related disorders, including dysmyelinating and demyelinating diseases. Pathological mechanisms, however, have been understood at the elementary level and targeted therapeutics has remained undeveloped. Here, we identify Fibulin 5 (FBLN5), an extracellular matrix (ECM) protein, as a key paracrine factor of human Wharton's jelly-derived mesenchymal stem cells (WJ-MSCs) to control the development of SCs. We show that co-culture with WJ-MSCs or treatment of recombinant FBLN5 promotes the proliferation of SCs through ERK activation, whereas FBLN5-depleted WJ-MSCs do not. We further reveal that during myelination of SCs, FBLN5 binds to Integrin and modulates actin remodeling, such as the formation of lamellipodia and filopodia, through RAC1 activity. Finally, we show that FBLN5 effectively restores the myelination defects of SCs in the zebrafish model of Charcot-Marie-Tooth (CMT) type 1, a representative demyelinating disease. Overall, our data propose human WJ-MSCs or FBLN5 protein as a potential treatment for myelin-related diseases, including CMT.

15.
Int J Mol Sci ; 21(19)2020 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-32993025

RESUMO

Mesenchymal stem cells (MSCs) are safe, and they have good therapeutic efficacy through their paracrine action. However, long-term culture to produce sufficient MSCs for clinical use can result in side-effects, such as an inevitable senescence and the reduction of the therapeutic efficacy of the MSCs. In order to overcome this, the primary culture conditions of the MSCs can be modified to simulate the stem cells' niche environment, resulting in accelerated proliferation, the achievement of the target production yield at earlier passages, and the improvement of the therapeutic efficacy. We exposed Wharton's jelly-derived MSCs (WJ-MSCs) to pressure stimuli during the primary culture step. In order to evaluate the proliferation, stemness, and therapeutic efficacy of WJ-MSCs, image, genetic, and Western blot analyses were carried out. Compared with standard incubation culture conditions, the cell proliferation was significantly improved when the WJ-MSCs were exposed to pressure stimuli. However, the therapeutic efficacy (the promotion of cell proliferation and anti-apoptotic effects) and the stemness of the WJ-MSCs was maintained, regardless of the culture conditions. Exposure to pressure stimuli is a simple and efficient way to improve WJ-MSC proliferation without causing changes in stemness and therapeutic efficacy. In this way, clinical-grade WJ-MSCs can be produced rapidly and used for therapeutic applications.


Assuntos
Diferenciação Celular , Proliferação de Células , Células-Tronco Mesenquimais/metabolismo , Comunicação Parácrina , Estresse Mecânico , Células Cultivadas , Humanos , Células-Tronco Mesenquimais/citologia
16.
Int J Mol Sci ; 21(16)2020 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-32785002

RESUMO

Glucoraphasatin (GRH) is a specific aliphatic glucosinolate (GSL) that is only abundant in radish (Raphanus sativus L.). The gene expression regulating GRH biosynthesis in radish is still poorly understood. We employed a total of 59 radish accessions to analyze GSL profiles and showed that GRH was specific and predominant among the aliphatic GSLs in radish roots. We selected five accessions roots with high, moderate and low GSL biosynthesis, respectively, to conduct a comparative transcriptome analysis and the qRT-PCR of the biosynthesis genes for aliphatic GSLs. In this study, among all the accessions tested, roots with the accession RA157-74 had a high GRH content and showed a significant expression of the aliphatic GSL biosynthesis genes. We defined the genes involved in the GRH biosynthesis process and found that they were regulated by a transcription factor (RSG00789) at the MYB29 locus in radish roots. We found 13 aliphatic GSL biosynthesis genes regulated by the RSG00789 gene in the GRH biosynthesis pathway.


Assuntos
Regulação da Expressão Gênica de Plantas , Genes de Plantas , Glucosinolatos/biossíntese , Proteínas de Plantas/genética , Raphanus/genética , Raphanus/metabolismo , Fatores de Transcrição/genética , Raízes de Plantas/genética , Raízes de Plantas/metabolismo , RNA de Plantas/genética , RNA-Seq , Reação em Cadeia da Polimerase em Tempo Real , Transcriptoma
17.
Hortic Res ; 7: 112, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32637140

RESUMO

Triterpenoid saponins (TSs) are common plant defense phytochemicals with potential pharmaceutical properties. Platycodon grandiflorus (Campanulaceae) has been traditionally used to treat bronchitis and asthma in East Asia. The oleanane-type TSs, platycosides, are a major component of the P. grandiflorus root extract. Recent studies show that platycosides exhibit anti-inflammatory, antiobesity, anticancer, antiviral, and antiallergy properties. However, the evolutionary history of platycoside biosynthesis genes remains unknown. In this study, we sequenced the genome of P. grandiflorus and investigated the genes involved in platycoside biosynthesis. The draft genome of P. grandiflorus is 680.1 Mb long and contains 40,017 protein-coding genes. Genomic analysis revealed that the CYP716 family genes play a major role in platycoside oxidation. The CYP716 gene family of P. grandiflorus was much larger than that of other Asterid species. Orthologous gene annotation also revealed the expansion of ß-amyrin synthases (bASs) in P. grandiflorus, which was confirmed by tissue-specific gene expression. In these expanded gene families, we identified key genes showing preferential expression in roots and association with platycoside biosynthesis. In addition, whole-genome bisulfite sequencing showed that CYP716 and bAS genes are hypomethylated in P. grandiflorus, suggesting that epigenetic modification of these two gene families affects platycoside biosynthesis. Thus whole-genome, transcriptome, and methylome data of P. grandiflorus provide novel insights into the regulation of platycoside biosynthesis by CYP716 and bAS gene families.

18.
Front Plant Sci ; 11: 630, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32528499

RESUMO

Coix lacryma-jobi, also called adlay or Job's tears, is an annual herbal plant belonging to the Poaceae family that has been cultivated as a cereal and medicinal crop in Asia. Despite its importance, however, genomic resources for better understanding this plant species at the molecular level and informing improved breeding strategies remain limited. To address this, we generated a draft genome of the C. lacryma-jobi variety ma-yuen (soft-shelled adlay) Korean cultivar, Johyun, by de novo assembly, using PacBio and Illumina sequencing data. A total of 3,362 scaffold sequences, 1.28 Gb in length, were assembled, representing 82.1% of the estimated genome size (1.56 Gb). Genome completeness was confirmed by the presence of 91.4% of the BUSCO angiosperm genes and mapping ratio of 98.3% of Illumina paired-end reads. We found that approximately 77.0% of the genome is occupied by repeat sequences, most of which are Gypsy and Copia-type retrotransposons, and evidence-based genome annotation predicts 39,574 protein-coding genes, 85.5% of which were functionally annotated. We further predict that soft-shelled adlay diverged from a common ancestor with sorghum 9.0-11.2 MYA. Transcriptome profiling revealed 3,988 genes that are differentially expressed in seeds relative to other tissues, of which 1,470 genes were strongly up-regulated in seeds and the most enriched Gene Ontology terms were assigned to carbohydrate and protein metabolism. In addition, we identified 76 storage protein genes including 18 seed-specific coixin genes and 13 candidate genes involved in biosynthesis of benzoxazinoids (BXs) including coixol, a unique BX compound found in C. lacryma-jobi species. The characterization of those genes can further our understanding of unique traits of soft-shelled adlay, such as high seed protein content and medicinal compound biosynthesis. Taken together, our genome sequence data will provide a valuable resource for molecular breeding and pharmacological study of this plant species.

19.
PLoS One ; 15(5): e0225564, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32380515

RESUMO

Senna tora is an annual herb with rich source of anthraquinones that have tremendous pharmacological properties. However, there is little mention of genetic information for this species, especially regarding the biosynthetic pathways of anthraquinones. To understand the key genes and regulatory mechanism of anthraquinone biosynthesis pathways, we performed spatial and temporal transcriptome sequencing of S. tora using short RNA sequencing (RNA-Seq) and long-read isoform sequencing (Iso-Seq) technologies, and generated two unigene sets composed of 118,635 and 39,364, respectively. A comprehensive functional annotation and classification with multiple public databases identified array of genes involved in major secondary metabolite biosynthesis pathways and important transcription factor (TF) families (MYB, MYB-related, AP2/ERF, C2C2-YABBY, and bHLH). Differential expression analysis indicated that the expression level of genes involved in anthraquinone biosynthetic pathway regulates differently depending on the degree of tissues and seeds development. Furthermore, we identified that the amount of anthraquinone compounds were greater in late seeds than early ones. In conclusion, these results provide a rich resource for understanding the anthraquinone metabolism in S. tora.


Assuntos
Antraquinonas/metabolismo , Sementes/genética , Extrato de Senna/metabolismo , Senna/genética , Senna/metabolismo , Transcriptoma , Regulação da Expressão Gênica de Plantas , Folhas de Planta/genética , Folhas de Planta/crescimento & desenvolvimento , Proteínas de Plantas/genética , Raízes de Plantas/genética , Raízes de Plantas/crescimento & desenvolvimento , RNA de Plantas/genética , RNA-Seq , Reação em Cadeia da Polimerase em Tempo Real , Sementes/crescimento & desenvolvimento , Fatores de Transcrição/genética
20.
ACS Omega ; 5(16): 9291-9300, 2020 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-32363279

RESUMO

Polymer latexes have long been used as coating binders by various branches of industry due to their capacity to adhere coating components and increase the strength of the dried final coatings. In addition, these latexes have been known to affect the rheology of coating dispersions. Currently, emulsion polymerization is the most widely used method of producing polymer latexes. While the stability of these latexes is primarily provided by electrostatic repulsion between surfactants, this property also causes foaming problems during coating processes. In this research, these problems were addressed by preparing polymer-stabilized (PS) latexes that contained different concentrations of acrylic acid. Steric protection of the latexes was provided by a protective shell consisting of starch and poly(vinyl alcohol) (PVA). The viscosity, particle size, ζ-potential, and viscoelastic behavior of the prepared latexes were investigated as a function of pH, and their surface tension and foaming tendencies were evaluated. The latexes were applied as coating cobinders in calcium carbonate and clay coating dispersions, and the viscoelastic properties, surface tensions, and foaming tendencies of these mixtures were studied. The presence of acrylic acid monomers was found to be an important factor affecting the viscosity, particle size, and ζ-potential of the PS latexes prepared in this work, which were further found to generate less foam than comparable emulsion-polymerized latexes. Finally, coating color viscoelastic properties were modified via the partial substitution of styrene-butadiene (S/B) latexes with PS latexes.

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