RESUMO
In recent years, an increase of uropathogenic Escherichia coli (UPEC) strains with Multidrug-resistant (MDR) and Extensively Drug-resistant (XDR) profiles that complicate therapy for urinary tract infections (UTIs) has been observed and has directly impacted costs and extended hospital stays. The aim of this study was to determine MDR- and XDR-UPEC clinical strains, their virulence genes, their phylogenetic groups and to ascertain their relationship with integrons and genetic diversity. From a collection of 500 UPEC strains, 103 were selected with MDR and XDR characteristics. MDR-UPEC strains were mainly associated with phylogenetic groups D (54.87%) and B2 (39.02%) with a high percentage (≥70%) of several fimbrial genes (ecpA, fimH, csgA, and papGII), an iron uptake gene (chuA), and a toxin gene (hlyA). In addition, a moderate frequency (40-70%) of other genes (iutD, tosA, and bcsA) was observed. XDR-UPEC strains were predominantly associated with phylogenetic groups B2 (47.61%) and D (42.85%), which grouped with ≥80 virulence genes, including ecpA, fimH, csgA, papGII, iutD, and chuA. A moderate frequency (40-70%) of the tosA and hlyA genes was observed. The class 1 and 2 integrons that were identified in the MDR- and XDR-UPEC strains were associated with phylogenetic groups D, B2, and A, while the XDR-UPEC strains that were associated with phylogenetic groups B2, D, and A showed an extended-spectrum beta-lactamase (ESBL) phenotype. The modifying enzymes (aadA1, aadB, aacC, ant1, dfrA1, dfrA17, and aadA4) that were identified in the variable region of class 1 and 2 integrons from the MDR strains showed resistance to gentamycin (56.25 and 66.66%, respectively) and trimethoprim-sulfamethoxazole (84.61 and 66.66%, respectively). The MDR- and XDR-UPEC strains were distributed into seven clusters and were closely related to phylogenic groups B2 and D. The diversity analysis by PFGE showed 42.68% of clones of MDR-UPEC and no clonal association in the XDR-UPEC strains. In conclusion, phylogenetic groups including virulence genes are widely associated with two integron classes (1 and 2) in MDR- and XDR-UPEC strains.
RESUMO
Introducción. A escala mundial, se ha observado la aparición de cepas de Pseudomonas aeruginosa multirresistentes durante las últimas décadas. Este patógeno oportunista produce mecanismos de resistencia a diversos antibióticos. La resistencia a carbapenémicos en cepas de P. aeruginosa se ha asociado con la formación de biopelículas bacterianas, favorecidas por la presencia de exopolisacáridos (EPS) embebidos en una matriz extracelular y por la producción de los pili tipo IV (T4P). El objetivo de este trabajo fue evaluar la formación de biopelículas en cepas clínicas aisladas en el Hospital Infantil de México Federico Gómez de P. aeruginosa resistentes a carbapenémicos, a través de la cuantificación de los expolisacáridos totales-reductores y su asociación con la expresión fenotípica de los T4P. Métodos. Se realizaron ensayos de susceptibilidad antibiótica por el método de Kirby-Bauer en 92 cepas clínicas de P. aeruginosa. Asimismo, se determinó la concentración mínima inhibitoria (MIC) para imipenem (IMP) y meropenem (MEM) por el método de dilución seriada en placas con agar con un replicador de Steers. La producción de metalo-β-lactamasas fue determinada mediante la técnica de difusión en disco y de sinergismo. Las biopelículas fueron realizadas en cepas clínicas de P. aeruginosa resistentes a carbapenémicos, a través de la cuantificación de cristal violeta, azúcares totales (antrona) y azúcares reductores (DNS), además de la expresión fenotípica de los T4P por la actividad de twitching motility . La diversidad genética de las cepas formadoras de biopelículas y productoras de azúcares reductores fue evaluada mediante la técnica de electroforesis de campos pulsados (PFGE). Resultados. El 30.4% (28/92) de las cepas de P. aeruginosa de origen pediátrico fueron recuperadas de la sala de cirugía y el 50% (46/92) de muestras de orina. Los resultados por Kirby-bauer mostraron que más de 50% de la cepas de P. aeruginosa fueron resistentes a 12 diferentes antibióticos. La MIC a los carbapenémicos fue de 64 µg/ml, con 43.1% (25/58) para MEM y 56.8% (33/58) para IMP. Así mismo, la producción de metalo-β-lactamasas fue observada en 43% (25/58) para MEM, 2% (1/58) para IMP y 12% (7/58) para ambas. Los análisis mostraron que 82% (48/58) de las cepas de P. aeruginosa resistentes a carbapenémicos fueron altas formadoras de biopelículas. De éstas, 46.5% (27/58) mostraron concentraciones de EPS totales de 2000 a 6000 µg/ml y 27.5% (16/58) mostraron concentraciones de EPS reductores de 316 a 1108 µg/ml; además, 75% (44/58) de estas cepas mostraron actividad fenotípica de twitching motility . Conclusiones. La detección de azúcares totales, azúcares reductores y el fenómeno de twitching motility son factores que favorecen el desarrollo de las biopelículas en cepas clínicas de P. aeruginosa resistentes a carbapenémicos. Los datos sugieren que estos factores están involucrados en la formación de biopelículas que confieren a la bacteria la capacidad para sobrevivir, persistir y colonizar a su hospedero.
Background. In recent years, the worldwide emergence of multidrug-resistant strains of Pseudomonas aeruginosa has been observed. This opportunistic pathogen produces mechanisms of resistance to several antibiotics. The resistance to carbapenems in P. aeruginosa strains has been associated with bacterial biofilm formation, favored by the presence of exopolysaccharides (EPS) embedded in an extracellular matrix and to the production of type IV pili (T4P). We undertook this study to assess biofilm formation in clinical strains of P. aeruginosa resistant to carbapenems isolated at the Hospital Infantil de Mexico Federico Gomez (HIMFG) through quantification of total-reducing EPS and its association with the phenotypic expression of T4P. Methods. Antibiotic susceptibility tests were performed using the Kirby-Bauer method in 92 clinical isolates of P. aeruginosa ; likewise, the minimum inhibitory concentration (MIC) was determined for imipenem (IMP) and meropenem (MEM) by the serial dilution method in agar plates with a Steers replicator. Production of metallo-β-lactamase (MBL) was determined by the disk diffusion method and synergism. Biofilm formation was performed in clinical isolates of P. aeruginosa resistant to carbapenems through the quantification of crystal violet, total sugar (anthrone), and reducing sugar (DNS), in addition to the phenotypic expression of T4P activity of twitching motility. The genetic diversity of strains forming biofilm and producing reducing sugars was evaluated by pulsed-field gel electrophoresis (PFGE). Results. There were 30.4% (28/92) of P. aeruginosa strains of pediatric origin and 50% (46/92) of urine samples that were recovered from the operating room. The results using the Kirby-Bauer method showed that >50% of P. aeruginosa strains were resistant to 12 different antibiotics. The MIC to carbapenems was 64 µg/ml, with 43.1% (25/58) for MEM and 56.8% (33/58) for IMP. Likewise, MBL production was observed in 43% (25/58) for MEM, 2% (1/58) for IMP, and 12% (7/58) for both. Qualitative and quantitative analysis showed that 82% (48/58) of P. aeruginosa strains resistant to carbapenems were high biofilm formers using the crystal violet method. Of the high biofilm forming strains, 46.5% (27/58) showed concentrations of total EPS between 2000 and 6000 µg/ml and 27.5% (16/58) showed concentrations of reducing EPS between 316 and 1108 µg/ml. In addition, 75% (44/58) of these strains showed phenotypic activity of twitching motility. Conclusions. Detection of total sugars, reducing sugars, and the phenomenon of twitching motility are factors that promote the development of biofilms in clinical strains of P. aeruginosa resistant to MBL producers to carbapenems. Our data suggest that these factors are involved in biofilm formation, which confer bacterium with the ability to survive, persist, and colonize its host.
