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1.
J Med Virol ; 75(1): 20-6, 2005 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-15543588

RESUMO

Albania is a Mediterranean country, still with a high endemicity level of hepatitis B virus (HBV) infection. The chronic hepatitis B profile was characterized in this geographical area and used as a model to investigate the impact of endemicity level on the prevalence of the two major forms of chronic hepatitis B (HBeAg-positive and HBeAg-negative chronic hepatitis B). A cross-sectional study was conducted among 62 chronic hepatitis B patients consecutively admitted to the most important tertiary health care center for the diagnosis and treatment of liver disease in Albania. HBV-DNA was measured with an in-house PCR with a sensitivity of 10(4) copies/ml which uses primers encompassing the pre-core/core region. PCR products were subjected to sequencing and oligohybridization assay. Of the 62 patients, 75.8% had HBeAg-negative chronic hepatitis B. Genotype D was found in all 39 patients with detectable HBV viremia, for whom the heterogeneity of the region modulating HBeAg expression was assessed. Basic core promoter (BCP) mutations (1762/1764) were observed more often in anti-HBe-positive and older patients. In more than 90% of the HBeAg-negative chronic hepatitis B patients with detectable viremia, HBV that carries the G to A pre-core mutation at nucleotide 1896 was found. Patients with HBeAg-positive chronic hepatitis B were younger than HBeAg-negative chronic hepatitis B patients, and for symptomatic and asymptomatic liver-disease patients, the age of peak prevalence was at least 10 years lower for HBeAg-positive chronic hepatitis B patients. In conclusion, the virological and clinical pattern of chronic hepatitis B in Albania is similar to that observed in other Mediterranean countries; it seems to be independent of the HBV endemicity level.


Assuntos
Vírus da Hepatite B/genética , Hepatite B Crônica/epidemiologia , Hepatite B Crônica/virologia , Adulto , Fatores Etários , Idoso , Albânia/epidemiologia , DNA Viral/sangue , DNA Viral/química , Variação Genética , Genótipo , Antígenos E da Hepatite B/sangue , Vírus da Hepatite B/classificação , Vírus da Hepatite B/isolamento & purificação , Humanos , Fígado/patologia , Pessoa de Meia-Idade , Epidemiologia Molecular , Hibridização de Ácido Nucleico , Mutação Puntual/genética , Regiões Promotoras Genéticas/genética , Análise de Sequência de DNA , Viremia
2.
Arch Virol ; 149(7): 1423-33, 2004 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-15221542

RESUMO

The presence of SENV and TTV infections among 50 patients who had undergone liver transplantation was evaluated. UTR amplification showed that 46 (92%) sera were positive. ORF-1 amplification showed that 25 (50%) patients were positive for either SENV (51.3%), TTV (10.8%), or both (37.8%) all confirmed by sequencing and phylogenetic analysis. SENV-D and SENV-H were the most prevalent viruses. The phylogenetic analysis of isolates showed that whereas SENV-D and SENV-G viruses showed sequence stability and strain persistence, SENV-H had cleared or mutated. Biological differences seem to exist among different genotypes in terms of viral replication and their persistence.


Assuntos
Infecções por Circoviridae/virologia , Circoviridae/genética , Circoviridae/isolamento & purificação , Transplante de Fígado , Torque teno virus/genética , Regiões 5' não Traduzidas , Circoviridae/classificação , DNA Viral/sangue , DNA Viral/química , Feminino , Genes Virais , Genótipo , Humanos , Masculino , Pessoa de Meia-Idade , Fases de Leitura Aberta , Filogenia , Reação em Cadeia da Polimerase , Análise de Sequência de DNA , Torque teno virus/classificação , Torque teno virus/isolamento & purificação
3.
J Gen Virol ; 80 ( Pt 3): 617-626, 1999 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-10092000

RESUMO

In order to elucidate the mechanisms of hepadnavirus evolution in vivo and to trace the fate of known quasispecies in a single animal during the acute phase of infection, a woodchuck (Marmota monax) was infected with the hepadnavirus woodchuck hepatitis B virus (WHV). Woodchuck 197 (W197) was injected intravenously with pooled sera collected from a chronic carrier that had been infected originally with a molecular clone of known genome sequence (WHV7). Viral genome variants from both the inoculum and the follow-up sera from W197 were characterized for the presence of quasispecies related to the WHV7 sequence. Interestingly, WHV7-related genomes were predominant 6 weeks post-infection (p.i.), whereas a highly heterogeneous virus population was present in the first viraemic serum (4 weeks p.i.). Using WHV7 as the prototype, the variability of the Pol and PreS/S regions in the first 11 weeks p.i. has been calculated. The sequence population in serum collected 6 weeks p.i. was highly homogeneous, with a mean variability of 0.36% in the region analysed. Mean variability values ranging from 0.82% to 1.61% were found in quasispecies from the other sera. The presence of possible selective pressure was analysed by means of the non-synonymous versus synonymous variation ratio (dn/d5). We found that the dn/d5 values were stable for the S ORF (ranging from 2.6 to 3.0), whereas a wider range was observed for the Pol ORF (from 1.4 to 3.0). Furthermore, from the analysis of the variability of the codon positions for the two overlapping ORFs it was found that, in most cases, non-synonymous mutations at position 1 of the Pol ORF (position 3 of the S ORF) corresponded to synonymous variation in the S (Pol) ORF, indicating independent evolution of the encoded proteins.


Assuntos
Evolução Molecular , Vírus da Hepatite B da Marmota/genética , Vírus da Hepatite B da Marmota/fisiologia , Hepatite B/virologia , Doença Aguda , Adaptação Fisiológica , Sequência de Aminoácidos , Animais , Códon/genética , DNA Viral/sangue , DNA Viral/genética , DNA Polimerase Dirigida por DNA/genética , Variação Genética , Genoma Viral , Hepatite B/sangue , Marmota/virologia , Dados de Sequência Molecular , Mutação/genética , Nucleotídeos/genética , Fases de Leitura Aberta/genética , Filogenia , Fatores de Tempo , Proteínas Virais/genética
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