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1.
Scand J Immunol ; 74(4): 377-82, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21645026

RESUMO

Sjögren's syndrome (SS) is an autoimmune disease targeting the exocrine glands resulting in xerostomia/keratoconjunctivitis sicca. Presently, we examined the levels and clinical correlations of IL-22 in SS. Patients with SS together with normal controls were randomly selected. IL-22 was detected at significantly higher levels in sera of patients with SS. The levels of IL-22 present in sera showed statistically significant direct correlations with hyposalivation, anti-SSB, anti-SSA/SSB combined, hypergammaglobulinemia and rheumatoid factor. IL-22 showed a direct correlation with major clinical parameters. The data suggest that IL-22 plays a critical role in the development of SS, and further study is needed to examine its function in human SS.


Assuntos
Interleucinas/sangue , Síndrome de Sjogren/sangue , Adulto , Idoso , Ensaio de Imunoadsorção Enzimática , Glândulas Exócrinas/imunologia , Glândulas Exócrinas/patologia , Feminino , Humanos , Hipergamaglobulinemia/imunologia , Interleucinas/biossíntese , Ceratoconjuntivite Seca/imunologia , Masculino , Pessoa de Meia-Idade , Fator Reumatoide/imunologia , Síndrome de Sjogren/imunologia , Xerostomia/imunologia , Interleucina 22
2.
Eur Respir J ; 36(3): 630-7, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20110395

RESUMO

Tidal breathing, and especially deep breathing, is known to antagonise bronchoconstriction caused by airway smooth muscle (ASM) contraction; however, this bronchoprotective effect of breathing is impaired in asthma. Force fluctuations applied to contracted ASM in vitro cause it to relengthen, force-fluctuation-induced relengthening (FFIR). Given that breathing generates similar force fluctuations in ASM, FFIR represents a likely mechanism by which breathing antagonises bronchoconstriction. Thus it is of considerable interest to understand what modulates FFIR, and how ASM might be manipulated to exploit this phenomenon. It was demonstrated previously that p38 mitogen-activated protein kinase (MAPK) signalling regulates FFIR in ASM strips. Here, it was hypothesised that the MAPK kinase (MEK) signalling pathway also modulates FFIR. In order to test this hypothesis, changes in FFIR were measured in ASM treated with the MEK inhibitor, U0126 (1,4-diamino-2,3-dicyano-1,4-bis[2-aminophenylthio]butadiene). Increasing concentrations of U0126 caused greater FFIR. U0126 reduced extracellular signal-regulated kinase 1/2 phosphorylation without affecting isotonic shortening or 20-kDa myosin light chain and p38 MAPK phosphorylation. However, increasing concentrations of U0126 progressively blunted phosphorylation of high-molecular-weight caldesmon (h-caldesmon), a downstream target of MEK. Thus changes in FFIR exhibited significant negative correlation with h-caldesmon phosphorylation. The present data demonstrate that FFIR is regulated through MEK signalling, and suggest that the role of MEK is mediated, in part, through caldesmon.


Assuntos
Quinases de Proteína Quinase Ativadas por Mitógeno/metabolismo , Músculo Liso/metabolismo , Traqueia/metabolismo , Animais , Butadienos/farmacologia , Depsipeptídeos/farmacologia , Cães , Inibidores Enzimáticos/farmacologia , Contração Muscular , Nitrilas/farmacologia , Fosforilação , Transdução de Sinais , Volume de Ventilação Pulmonar , Distribuição Tecidual
3.
Eur Respir J ; 32(5): 1224-30, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-18768574

RESUMO

Breathing (especially deep breathing) antagonises development and persistence of airflow obstruction during bronchoconstrictor stimulation. Force fluctuations imposed on contracted airway smooth muscle (ASM) in vitro result in its relengthening, a phenomenon called force fluctuation-induced relengthening (FFIR). Because breathing imposes similar force fluctuations on contracted ASM within intact lungs, FFIR represents a likely mechanism by which breathing antagonises bronchoconstriction. While this bronchoprotective effect appears to be impaired in asthma, corticosteroid treatment can restore the ability of deep breaths to reverse artificially induced bronchoconstriction in asthmatic subjects. It has previously been demonstrated that FFIR is physiologically regulated through the p38 mitogen-activated protein kinase (MAPK) signalling pathway. While the beneficial effects of corticosteroids have been attributed to suppression of airway inflammation, the current authors hypothesised that alternatively they might exert their action directly on ASM by augmenting FFIR as a result of inhibiting p38 MAPK signalling. This possibility was tested in the present study by measuring relengthening in contracted canine tracheal smooth muscle (TSM) strips. The results indicate that dexamethasone treatment significantly augmented FFIR of contracted canine TSM. Canine tracheal ASM cells treated with dexamethasone demonstrated increased MAPK phosphatase-1 expression and decreased p38 MAPK activity, as reflected in reduced phosphorylation of the p38 MAPK downstream target, heat shock protein 27. These results suggest that corticosteroids may exert part of their therapeutic effect through direct action on airway smooth muscle, by decreasing p38 mitogen-activated protein kinase activity and thus increasing force fluctuation-induced relengthening.


Assuntos
Asma/metabolismo , Músculo Liso/metabolismo , Esteroides/metabolismo , Traqueia/metabolismo , Obstrução das Vias Respiratórias/tratamento farmacológico , Obstrução das Vias Respiratórias/patologia , Animais , Broncoconstrição , Células Cultivadas , Inibidor de Quinase Dependente de Ciclina p27/metabolismo , Cães , Pulmão/patologia , Fosforilação , Transdução de Sinais , Estresse Mecânico , Proteínas Quinases p38 Ativadas por Mitógeno/metabolismo
4.
J Toxicol Clin Toxicol ; 39(6): 641-8, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11762675

RESUMO

BACKGROUND: Although ingestion of sustained-release potassium supplements can cause life-threatening hyperkalemia in patients with abnormal renal function, only a few previous reports suggest that this may occur in patients with normal renal function. We report 2 cases of hyperkalemia in patients with normal renal function who developed hyperkalemia after ingesting sustained-release potassium preparations and describe the use of radiography and whole-bowel irrigation in their care. CASE REPORTS: The first patient is a 50-year-old woman who ingested 100 K-Dur tablets (each tablet containing 750 mg KCl or 10 mEq potassium) in a suicide attempt 1 hour prior to presenting to the emergency department. She developed a peak serum potassium level of 9.7 mEq/L and had transient, potentially life-threatening electrocardiographic changes. The second patient was a 17-year-old man who ingested 20 to 30 Klor-Con tablets (each tablet containing 750 mg KCl or 10 mEq potassium) in a suicide attempt 10 hours prior to presentation. Although he developed a peak serum potassium level of 6.1 mEq/L, he had a persistently normal electrocardiogram. In both patients, the tablets were visualized on abdominal radiographs and the gastrointestinal tracts of both were successfully decontaminated using whole-bowel irrigation. DISCUSSION: Although the sensitivity and specificity are unknown, the abdominal radiograph appears to be useful in detecting sustained-release potassium tablets. Whole-bowel irrigation as a primary method of gastrointestinal decontamination also appears to be effective although its use is not previously reported for sustained-release potassium overdoses.


Assuntos
Cloreto de Potássio/intoxicação , Adolescente , Preparações de Ação Retardada , Overdose de Drogas/diagnóstico por imagem , Eletrocardiografia/efeitos dos fármacos , Feminino , Dependência de Heroína/complicações , Humanos , Hiperpotassemia/sangue , Masculino , Pessoa de Meia-Idade , Radiografia
5.
Acta Crystallogr D Biol Crystallogr ; 56(Pt 11): 1468-9, 2000 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11053855

RESUMO

CTLA-4 (CD152) is involved in T-lymphocyte co-stimulatory pathways modulating both humoral and cellular immune response. The membrane-external domain has been prepared and crystallized. The unit-cell parameters are a = b = 43, c = 143 A with the symmetry of space group P3(1)21 or its enantiomer and the crystals diffract to 2. 7 A resolution at synchrotron beamlines.


Assuntos
Antígenos de Diferenciação/química , Imunoconjugados , Proteínas de Membrana/química , Abatacepte , Antígenos CD , Antígeno CTLA-4 , Cristalização , Cristalografia por Raios X , Conformação Proteica
6.
Biophys J ; 77(3): 1619-26, 1999 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-10465773

RESUMO

A previously published computational procedure was used to identify cooperative folding units within tryptophan repressor. The theoretical results predict the existence of distinct stable substructures in the protein chain for the monomer and the dimer. The predictions were compared with experimental data on structure and folding of the repressor and its proteolytic fragments and show excellent agreement for the dimeric form of the protein. The results suggest that the monomer, the structure of which is currently unknown, is likely to have a structure different from the one it has within the context of the highly intertwined dimer. Application of this method to the repressor monomer represents an extension of the computations into the realm of evaluating hypothetical structures such as those produced by threading.


Assuntos
Proteínas de Bactérias , Proteínas de Escherichia coli , Estrutura Secundária de Proteína , Proteínas Repressoras/química , Apoproteínas/química , Dicroísmo Circular , Dimerização , Escherichia coli/metabolismo , Substâncias Macromoleculares , Fragmentos de Peptídeos/química , Dobramento de Proteína , Proteínas Repressoras/metabolismo
7.
Eur J Biochem ; 262(1): 26-35, 1999 May.
Artigo em Inglês | MEDLINE | ID: mdl-10231360

RESUMO

Structural analysis of human profilin has revealed two tryptophan residues, W3 and W31, which interact with polyproline. The codons for these residues were mutated to encode phenylalanine and the mutant proteins overexpressed in Eschericia coli. The isolated proteins were diminished in their ability to bind polyproline, whereas phosphatidylinositol 4,5-bisphosphate (PIP2) binding remained unchanged. In many strains of Saccharomyces cerevisiae, disruption of the gene encoding profilin, PFY1, is lethal. It was found that expression of the gene for human profilin is capable of suppressing this lethality. The polyproline-binding mutant alleles of the human gene were cloned into various yeast expression vectors. Each of the mutant genes resulted in suppression of the lethality of pfy1Delta. It was observed that the mutant protein expression levels paralleled the growth rates of the strains. The severity of various morphological abnormalities of the strains was also attenuated with increased protein levels, suggesting that profilin polyproline-binding mutations are deleterious to cell growth unless overexpressed. Both tryptophan mutations were combined to give a third mutant allele that was found both unable to bind polyproline and to suppress the lethality of a pfy1 deletion. Immunoprecipitation experiments suggested that the mutants were unaltered in their affinity for actin and PIP2. These data strongly suggest that polyproline binding is an essential function of profilin.


Assuntos
Proteínas Contráteis , Proteínas dos Microfilamentos/metabolismo , Peptídeos/metabolismo , Saccharomyces cerevisiae/genética , Sequência de Bases , Primers do DNA , Teste de Complementação Genética , Humanos , Proteínas dos Microfilamentos/genética , Mutagênese , Profilinas , Ligação Proteica
8.
Mol Immunol ; 36(17): 1189-205, 1999 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-10698321

RESUMO

The mAbs HyHEL-8, HyHEL-26 (HH8, and HH26, respectively) recognize epitopes on hen egg-white lysozyme (HEL) highly overlapping with the structurally defined HH10 epitope, while the structurally related XRPC-25 is specific for DNP and does not bind HEL. All four Abs appear to use the same Vk23 germ line gene, and all but HH8 use the same VH36-60 germ line gene. Of the three anti-HEL Abs, the sequences of HH26 variable regions are closest to those encoded by the respective germ line sequences. HH8 utilizes a different member of the VH36-60 gene family. Thus, the same Vk and VH genes, combined with somatically derived sequence differences, are used to recognize the unrelated Ags HEL and DNP. In contrast, different VH36-60 germ line genes are used to bind the same antigen (e.g. HH8 vs HH10 and HH26). While the affinities of HH10, HH8, and HH26 for HEL vary by less than 10-fold, their affinities for mutated Ag vary over several orders of magnitude. Analyses of Fab binding kinetics with natural species variants and site-directed mutants of lysozyme indicate that these cross-reactivity differences reflect the relative sensitivities of both the association and dissociation rates to antigenic mutation: HH8 has relatively mutation-insensitive association and dissociation rates, HH10 has a relatively mutation-sensitive association rate but more variable dissociation rates, and HH26 has variable association and dissociation rates. Only a few amino acid differences among the antibodies produce the observed differences in the robustness of the association and dissociation rates. Our results suggest that association and dissociation rates and mutation sensitivity of these rates may be independently modulated during antibody repertoire development.


Assuntos
Anticorpos Monoclonais/química , Animais , Anticorpos Monoclonais/genética , Anticorpos Monoclonais/metabolismo , Afinidade de Anticorpos , Especificidade de Anticorpos , Reações Antígeno-Anticorpo , Epitopos/química , Epitopos/genética , Genes de Imunoglobulinas , Variação Genética , Cadeias Pesadas de Imunoglobulinas/química , Cadeias Pesadas de Imunoglobulinas/genética , Cadeias Pesadas de Imunoglobulinas/metabolismo , Região Variável de Imunoglobulina/química , Região Variável de Imunoglobulina/genética , Região Variável de Imunoglobulina/metabolismo , Cinética , Muramidase/química , Muramidase/genética , Muramidase/imunologia , Mutagênese Sítio-Dirigida
9.
Acad Emerg Med ; 4(10): 967-71, 1997 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-9332628

RESUMO

OBJECTIVE: To determine whether the absence of a gestational sac on transvaginal ultrasonography in patients with a quantitative beta-human chorionic gonadotropin (beta-hCG) > 3,000 mIU/mL and/or menstrual days > 38 excludes the diagnosis of a normal intrauterine pregnancy (IUP). METHODS: A retrospective analysis was performed of ED patients evaluated from August 1991 to December 1994 at an urban teaching hospital. Patients presented with abdominal pain and/or vaginal bleeding and had a positive serum beta-hCG test. Patients who had transvaginal ultrasonographies performed during the ED visit that were read as indeterminate were reviewed. Menstrual days were determined by subtracting the date of the last normal menstrual period (LMP) from the ED visit date. ED beta-hCGs were quantified. Patients were excluded if the LMP or quantitative beta-hCG result was not available or if the final diagnosis could not be definitively determined. RESULTS: 248 patients met eligibility criteria; of these, 54 were excluded. Therefore, 194 patients were enrolled. Menstrual days ranged from 5 to 151, with a median of 54 days. Of 143 patients with menstrual days > 38 and no gestational sac by ultrasonography, only 4 (2.8%) had a final diagnosis of normal IUP. The menstrual days for the 4 normal IUPs were 39, 41, 42, and 59 days. beta-hCGs ranged from 19 to 151,926 mIU/mL, with a median of 2,410 mIU/mL. None of the 74 patients with a beta-hCG > 3,000 mIU/mL and no gestational sac by ultrasonography had a final diagnosis of normal IUP. CONCLUSION: In patients with either a beta-hCG > 3,000 mIU/mL or menstrual days > 38 and no gestational sac by transvaginal ultrasonography, the likelihood of a normal IUP is low.


Assuntos
Gonadotropina Coriônica/sangue , Ciclo Menstrual , Gravidez Ectópica/diagnóstico , Gravidez/estatística & dados numéricos , Ultrassonografia Pré-Natal , Saco Vitelino/diagnóstico por imagem , Adulto , Intervalos de Confiança , Diagnóstico Diferencial , Serviço Hospitalar de Emergência , Feminino , Humanos , Gravidez Ectópica/diagnóstico por imagem , Diagnóstico Pré-Natal/métodos , Probabilidade , Estudos Retrospectivos , Sensibilidade e Especificidade
10.
Nat Struct Biol ; 4(7): 527-31, 1997 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-9228944

RESUMO

The structure of human CTLA-4 reveals that residues Met 99, Tyr 100 and Tyr 104 of the M99YPPPY104 motif are adjacent to a patch of charged surface residues on the A'GFCC' face of the protein. Mutation of these residues, which are conserved in the CTLA-4/CD28 family, significantly reduces binding to CD80 and/or CD86, implicating this patch as a ligand binding site.


Assuntos
Antígenos CD/metabolismo , Antígenos de Diferenciação/química , Antígenos de Diferenciação/metabolismo , Antígeno B7-1/metabolismo , Antígenos CD28/metabolismo , Imunoconjugados , Glicoproteínas de Membrana/metabolismo , Abatacepte , Sequência de Aminoácidos , Animais , Antígenos de Diferenciação/genética , Antígeno B7-2 , Sítios de Ligação , Antígeno CTLA-4 , Sequência Conservada , Dimerização , Humanos , Espectroscopia de Ressonância Magnética/métodos , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Homologia de Sequência de Aminoácidos , Soluções , Sulfetos
11.
Acta Crystallogr D Biol Crystallogr ; 52(Pt 3): 586-8, 1996 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-15299687

RESUMO

Uridine 5'-diphospho-N-acetylenolpyruvylglucosamine reductase (MurB), the second enzyme in the peptidoglycan synthetic pathway of Escherichia coli, has been crystallized in two previously unreported forms, one orthorhombic and the other monoclinic. MurB (molecular mass 38 kDa) crystallizes in a range of conditions that utilize polyethylene glycol fractions as precipitants, and crystals can be grown with or without the enzyme's substrate, uridine 5'-diphospho-N-acetylenolpyruvylglucosamine. X-ray diffraction from crystals of the orthorhombic form extends to 2 A resolution and shows the symmetry and systematic absences of space group P2(1)2(1)2(1). These crystals show significant variations in cell dimensions at room temperature and at 100 K. A crystal used to collect a 2.0 A resolution data set at a synchrotron source showed cell dimensions at ca 100 K of a = 51.0, b = 79.3 and c = 87.1 A, indicating one molecule peroasymmetric unit. The monoclinic crystals scatter X-rays to 3.0 A resolution consistent with space group P2(1), unit-cell dimensions (ca 100 K) a = 50.7, b = 92.4, c = 85.5 A, and beta = 104 degrees, and two molecules per asymmetric unit. Mercury derivatives have been prepared with both orthorhombic and monoclinic forms, and efforts are underway to exploit these derivatives to determine the structure of this protein.

12.
J Mol Biol ; 258(1): 37-52, 1996 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-8613990

RESUMO

The binding of tryptophan repressor (TrpR) to its operators was examined quantitatively using in vitro and in vivo methods. DNA sequence requirements for 1:1 and tandem 2:1 (TrpR:DNA) binding in various sequence contexts were studied. The results indicate that the optimal half-site sequence for recognition by one helix-turn-helix motif of one TrpR dimer is 3'CNTGA5'5'GNACT3', consistent with contacts observed by X-ray diffraction analysis of cocrystalline 1:1 and 2:1 complexes. Half-sites can be paired to form a palindrome either by direct abutment, forming the nucleation site for a tandem 2:1 complex, or with an 8-base-pair spacer, forming a 1:1 target. Dimethylsulfate (DMS) methylation-protection footprinting in vitro of 1:1 and 2:1 complexes formed sequentially on the two unequal half-site pairs of the trpEDCBA operator from Serratia marcescens indicated an obligate hierarchy of site occupancy, with one half-site pair serving as the nucleation site for tandem binding. DMS footprinting of Escherichia coli operators in vivo showed that, over a wide range of intracellular TrpR concentration, the trpEDCBA operator is occupied by three repressor dimers, aroH is occupied by two dimers, and the 1:1 binding mode is used on the trpR operator. The coexistence of these distinct occupancy states implies that changes in protein concentration affect only the fractional occupancy of each operator rather than the binding mode, which is determined by the number of half-site sequences present in the operator region. Cooperativity of tandem complex formation measured by gel retardation using a symmetrized synthetic operator containing identical, optimal sites spaced as in natural operators was found to be modest, implying a maximum coupling free energy of approximately -2 kcal/mol. On other sequences the apparent degree of cooperativity, as well as the apparent affinity, varies with sequence and sequence context in a manner consistent with the structural models and which suggests compensation between affinity and cooperativity as a mechanism that allows tolerance of operator sequence variation.


Assuntos
Proteínas de Bactérias , DNA Bacteriano/metabolismo , Regiões Operadoras Genéticas/genética , Proteínas Repressoras/metabolismo , Triptofano , Sequência de Bases , Sítios de Ligação , Pegada de DNA , DNA Bacteriano/química , Escherichia coli , Sequências Hélice-Volta-Hélice , Dados de Sequência Molecular , Óperon , Ligação Proteica , Proteínas Repressoras/química , Serratia marcescens
13.
Biochemistry ; 35(9): 2824-9, 1996 Mar 05.
Artigo em Inglês | MEDLINE | ID: mdl-8608117

RESUMO

Electrostatic interactions between charged amino acids often affect heterospecificity in coiled coils as evidenced by the interaction between the oncoproteins, fos and jun. Such interactions have been successfully exploited in the design of heteromeric coiled coils in a number of laboratories. It has been suggested that heterospecificity in these dimeric coiled-coil systems is driven not by specific electrostatic interactions in the heterodimers but rather by electrostatic repulsion acting to destabilize the homodimer state relative to the heterodimer state. We show that it is possible to design ion pair interactions that directly stabilize the heterotetrameric coiled-coil state. Synthetic peptides were used whose sequences are based on the C-terminal tetramerization domain of Lac repressor, as a model system for four-chain coiled coils (Fairman et al., 1995). These Lac-based peptides, containing either glutamic acid (Lac21E) or lysine (Lac21K) at all b and c heptad positions, only weakly self-associate but, when mixed, afford a highly stable heterotetramer. This study represents the first experimental evidence for the importance of the b and c heptad positions to the stability of coiled coils. Finally, pH dependence and NaCl dependence studies show that heterotetramer stability is driven by ion pair interactions between glutamate and lysine; these interactions contribute about 0.6 kcal/mol of stabilizing free energy for each potential glutamate-lysine pair.


Assuntos
Ácido Glutâmico , Lisina , Modelos Moleculares , Peptídeos/química , Estrutura Secundária de Proteína , Sequência de Aminoácidos , Calorimetria , Gráficos por Computador , Eletroquímica , Temperatura Alta , Cinética , Substâncias Macromoleculares , Dados de Sequência Molecular , Proteína Oncogênica p65(gag-jun)/química , Proteínas Oncogênicas v-fos/química , Desnaturação Proteica , Relação Estrutura-Atividade , Termodinâmica
14.
J Mol Biol ; 254(2): 150-62, 1995 Nov 24.
Artigo em Inglês | MEDLINE | ID: mdl-7490739

RESUMO

The arginine repressor of Escherichia coli is a classical feedback regulator, signalling the availability of L-arginine inside the cell. It differs from most other bacterial repressors in functioning as a hexamer, but structural details have been lacking and its shares no clear sequence homologies with other transcriptional regulators. Analysis of the amino acid residue sequence and proteolytic cleavage pattern of the repressor was used to identify a region predicted to house the DNA-binding function. When this protein fragment is overexpressed from a clone of the corresponding gene fragment, it represses ornithine transcarbamylase levels in vivo, and binds to the operator DNA in vitro, both in an arginine-independent manner. Sedimentation equilibrium and gel filtration indicate that the purified protein fragment is a monomer in solution. The results thus define the domain organization of the repressor at low resolution, suggesting that the N and C-terminal portions of the polypeptide chain are separated by a structural and functional border that decouples hexamerization and arginine binding from DNA binding.


Assuntos
Arginina/metabolismo , Proteínas de Bactérias , DNA Bacteriano/metabolismo , Proteínas de Ligação a DNA/química , Proteínas de Escherichia coli , Escherichia coli/química , Proteínas Repressoras/química , Regulação Alostérica/genética , Sequência de Aminoácidos , Arginina/farmacologia , Sequência de Bases , Quimotripsina/metabolismo , Dicroísmo Circular , DNA Bacteriano/genética , Proteínas de Ligação a DNA/metabolismo , Repressão Enzimática , Regulação Bacteriana da Expressão Gênica/genética , Isopropiltiogalactosídeo/farmacologia , Dados de Sequência Molecular , Peso Molecular , Regiões Operadoras Genéticas , Ornitina Carbamoiltransferase/biossíntese , Ornitina Carbamoiltransferase/genética , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/genética , Fragmentos de Peptídeos/metabolismo , Proteínas Repressoras/isolamento & purificação , Proteínas Repressoras/metabolismo , Transcrição Gênica , Tripsina/metabolismo
15.
Protein Sci ; 4(8): 1457-69, 1995 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-8520471

RESUMO

Limited information is available on inherent stabilities of four-chain-coils. We have developed a model system to study this folding motif using synthetic peptides derived from sequences contained in the tetramerization domain of Lac repressor. These peptides are tetrameric as judged by both gel filtration and sedimentation equilibrium and the tetramers are fully helical as determined by CD. The four-chain coiled-coils are well folded as judged by the cooperativity of thermal unfolding and by the extent of dispersion in aliphatic chemical shifts seen in NMR spectra. In addition, we measured the chain length dependence of this four-chain coiled-coil. To this end, we developed a general procedure for nonlinear curve fitting of denaturation data in oligomeric systems. The dissociation constants for bundles that contain alpha-helical chains 21, 28, and 35 amino acids in length are 3.1 x 10(-12), 6.7 x 10(-23), and 1.0 x 10(-38) M3, respectively. This corresponds to tetramer stabilities (in terms of the peptide monomer concentration) of 180 microM, 51 nM, and 280 fM, respectively. Finally, we discuss the rules governing coiled-coil formation in light of the work presented here.


Assuntos
Conformação Proteica , Sequência de Aminoácidos , Dicroísmo Circular , Dados de Sequência Molecular , Dobramento de Proteína , Proteínas Repressoras/química , Termodinâmica
16.
Protein Sci ; 4(3): 450-9, 1995 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-7795529

RESUMO

Profilin is a ubiquitous eukaryotic protein that binds to both cytosolic actin and the phospholipid phosphatidylinositol-4,5-bisphosphate. These dual competitive binding capabilities of profilin suggest that profilin serves as a link between the phosphatidyl inositol cycle and actin polymerization, and thus profilin may be an essential component in the signaling pathway leading to cytoskeletal rearrangement. The refined three-dimensional solution structure of human profilin I has been determined using multidimensional heteronuclear NMR spectroscopy. Twenty structures were selected to represent the solution conformational ensemble. This ensemble of structures has root-mean-square distance deviations from the mean structure of 0.58 A for the backbone atoms and 0.98 A for all non-hydrogen atoms. Comparison of the solution structure of human profilin to the crystal structure of bovine profilin reveals that, although profilin adopts essentially identical conformations in both states, the solution structure is more compact than the crystal structure. Interestingly, the regions that show the most structural diversity are located at or near the actin-binding site of profilin. We suggest that structural differences are reflective of dynamical properties of profilin that facilitate favorable interactions with actin. The global folding pattern of human profilin also closely resembles that of Acanthamoeba profilin I, reflective of the 22% sequence identity and approximately 45% sequence similarity between these two proteins.


Assuntos
Proteínas Contráteis/química , Proteínas dos Microfilamentos/química , Actinas/química , Actinas/metabolismo , Cristalografia por Raios X , Humanos , Espectroscopia de Ressonância Magnética , Proteínas dos Microfilamentos/metabolismo , Modelos Moleculares , Profilinas , Ligação Proteica , Soluções/química , Especificidade da Espécie
17.
Biochemistry ; 33(46): 13531-9, 1994 Nov 22.
Artigo em Inglês | MEDLINE | ID: mdl-7947763

RESUMO

NMR spectroscopy has been used to characterize the protein-protein interactions between the mouse Grb2 (mGrb2) N-terminal SH3 domain complexed with a 15-residue peptide (SPLLPKLPP-KTYKRE) corresponding to residues 1264-1278 of the mouse Sos-2 (mSos-2) protein. Intermolecular interactions between the peptide and 13C-15N-labeled SH3 domain were identified in half-reverse-filtered 2D and 3D NOESY experiments. Assignments for the protons involved in interactions between the peptide and the SH3 domain were confirmed in a series of NOESY experiments using a set of peptides in which different leucine positions were fully deuterated. The peptide ligand-binding site of the mGrb2 N-terminal SH3 domain is defined by the side chains of specific aromatic residues (Tyr7, Phe9, Trp36, Tyr52) that form two hydrophobic subsites contacting the side chains of the peptide Leu4 and Leu7 residues. An adjacent negatively charged subsite on the SH3 surface is likely to interact with the side chain of a basic residue at peptide position 10 that we show to be involved in binding. The peptide-binding site of the SH3 is characterized by large perturbations of amide chemical shifts when the peptide is added to the SH3 domain. The mGrb2 N-terminal SH3 domain structure in the complex is well-defined (backbone RMSD of 0.56 +/- 0.21 calculated over the backbone N, C alpha, and C atoms of residues 1-54). The structure of the peptide in the complex is less well-defined but displays a distinct orientation.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Proteínas Adaptadoras de Transdução de Sinal , Oligopeptídeos/química , Fragmentos de Peptídeos/química , Proteínas/química , Sequência de Aminoácidos , Animais , Sítios de Ligação , Gráficos por Computador , Proteína Adaptadora GRB2 , Fatores de Troca do Nucleotídeo Guanina , Espectroscopia de Ressonância Magnética , Camundongos , Dados de Sequência Molecular , Ligação Proteica , Conformação Proteica , Proteínas Recombinantes
18.
J Biol Chem ; 269(6): 4620-5, 1994 Feb 11.
Artigo em Inglês | MEDLINE | ID: mdl-8308034

RESUMO

Profilin is a ubiquitous protein that has been implicated in the signaling pathway leading to cytoskeletal rearrangement in cells. An unusual property of profilin is its high binding affinity for poly-L-proline (PLP). This binding property is conserved in the profilins from diverse species with little sequence homology. We have monitored the binding of PLP to profilin by fluorescence and nuclear magnetic resonance spectroscopies. NMR spectroscopy has identified several residues whose amide nitrogen and amide hydrogen chemical shifts are significantly perturbed by binding of PLP. The affected residues are located at various locations throughout profilin's primary structure; however, mapping the location of the affected residues onto the recently determined three-dimensional solution structure of human profilin indicates that the effects of PLP binding are highly localized. Poly-L-proline binds profilin at the hydrophobic interface between profilin's NH2- and COOH-terminal helices and the upper face of its antiparallel beta-sheet. In contrast, residues located on the opposite side of the profilin structure are unaffected. The extent of the potential interaction surface of the PLP-profilin complex suggests that as few as 6 contiguous prolines would be sufficient for binding profilin. Examination of sequence data bases indicates that stretches of prolines of this length and longer occur in numerous regulatory proteins, suggesting that the ability of profilin to bind polyproline may be an important component of its signaling capabilities.


Assuntos
Proteínas Contráteis , Proteínas dos Microfilamentos/metabolismo , Peptídeos/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Humanos , Técnicas In Vitro , Espectroscopia de Ressonância Magnética , Dados de Sequência Molecular , Profilinas , Ligação Proteica , Estrutura Terciária de Proteína , Espectrometria de Fluorescência , Triptofano/química
19.
Biochemistry ; 32(50): 13818-29, 1993 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-8268157

RESUMO

Human profilin is a 15-kDa protein that plays a major role in the signaling pathway leading to cytoskeletal rearrangement. Essentially complete assignment of the 1H, 13C, and 15N resonances of human profilin have been made by analysis of multidimensional, double- and triple-resonance nuclear magnetic resonance (NMR) experiments. The deviation of the 13C alpha and 13C beta chemical shifts from their respective random coil values were analyzed and correlate well with the secondary structure determined from the NMR data. Twenty structures of human profilin were refined in the program X-PLOR using a total of 1186 experimentally derived conformational restraints. The structures converged to a root mean squared distance deviation of 1.5 A for the backbone atoms. The resultant conformational ensemble indicates that human profilin is an alpha/beta protein comprised of a seven-stranded, antiparallel beta-sheet and three helices. The secondary structure elements for human profilin are quite similar to those found in Acanthamoeba profilin I [Archer, S. J., Vinson, V. K., Pollard, T. D., & Torchia, D. A. (1993), Biochemistry 32, 6680-6687], suggesting that the three-dimensional structure of Acanthamoeba profilin I should be analogous to that determined here for human profilin. The structure determination of human profilin has facilitated the sequence alignment of lower eukaryotic and human profilins and provides a framework upon which the various functionalities of profilin can be explored. At least one element of the actin-binding region of human profilin is an alpha-helix. Two mechanisms by which phosphatidylinositol 4,5-bisphosphate can interfere with actin-binding by human profilin are proposed.


Assuntos
Proteínas Contráteis , Proteínas dos Microfilamentos/química , Dobramento de Proteína , Sequência de Aminoácidos , Isótopos de Carbono , Humanos , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Dados de Sequência Molecular , Isótopos de Nitrogênio , Profilinas , Estrutura Secundária de Proteína , Prótons
20.
FEBS Lett ; 336(3): 457-61, 1993 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-8282110

RESUMO

The dynamic properties of 111 backbone HN sites in uncomplexed human profilin, a protein of 139 residues, have been characterized by two-dimensional inverse-detected 1H-15N NMR spectroscopy. Heteronuclear (1H)-15N nuclear Overhauser effects and 15N longitudinal and transverse relaxation rates have been analyzed in terms of model-free spectral density functions and exchange contributions to transverse relaxation rates. Relatively high mobilities on the nanosecond time-scale are observed for Asp26 and Ser27, which form part of a loop connecting beta-strands A and B, and for Thr92 through Ala95, which are in a loop connecting beta-strands E and F. Significant exchange contributions, indicative of motions on the microsecond to millisecond time-scale, have been obtained for 30 residues. These include Leu77, Asp80 and Gly81 of a loop between beta-strands D and E, Ser84 and Met85 of beta-strand E, Gly121 of a loop connecting beta-strand G and the C-terminal helix, and Gln138, which is next to the C-terminal residue Tyr139. Some of the regions showing high flexibility in profilin are known to be involved in poly-L-proline binding.


Assuntos
Proteínas dos Microfilamentos/química , Estrutura Secundária de Proteína , Sequência de Aminoácidos , Proteínas Contráteis/química , Humanos , Hidrogênio , Espectroscopia de Ressonância Magnética/métodos , Matemática , Modelos Moleculares , Isótopos de Nitrogênio , Profilinas , Dobramento de Proteína
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