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1.
Microbiome ; 8(1): 93, 2020 06 13.
Artigo em Inglês | MEDLINE | ID: mdl-32534596

RESUMO

BACKGROUND: The vertebrate clade diverged into Chondrichthyes (sharks, rays, and chimeras) and Osteichthyes fishes (bony fishes) approximately 420 mya, with each group accumulating vast anatomical and physiological differences, including skin properties. The skin of Chondrichthyes fishes is covered in dermal denticles, whereas Osteichthyes fishes are covered in scales and are mucous rich. The divergence time among these two fish groups is hypothesized to result in predictable variation among symbionts. Here, using shotgun metagenomics, we test if patterns of diversity in the skin surface microbiome across the two fish clades match predictions made by phylosymbiosis theory. We hypothesize (1) the skin microbiome will be host and clade-specific, (2) evolutionary difference in elasmobranch and teleost will correspond with a concomitant increase in host-microbiome dissimilarity, and (3) the skin structure of the two groups will affect the taxonomic and functional composition of the microbiomes. RESULTS: We show that the taxonomic and functional composition of the microbiomes is host-specific. Teleost fish had lower average microbiome within clade similarity compared to among clade comparison, but their composition is not different among clade in a null based model. Elasmobranch's average similarity within clade was not different than across clade and not different in a null based model of comparison. In the comparison of host distance with microbiome distance, we found that the taxonomic composition of the microbiome was related to host distance for the elasmobranchs, but not the teleost fishes. In comparison, the gene function composition was not related to the host-organism distance for elasmobranchs but was negatively correlated with host distance for teleost fishes. CONCLUSION: Our results show the patterns of phylosymbiosis are not consistent across both fish clades, with the elasmobranchs showing phylosymbiosis, while the teleost fish are not. The discrepancy may be linked to alternative processes underpinning microbiome assemblage, including possible historical host-microbiome evolution of the elasmobranchs and convergent evolution in the teleost which filter specific microbial groups. Our comparison of the microbiomes among fishes represents an investigation into the microbial relationships of the oldest divergence of extant vertebrate hosts and reveals that microbial relationships are not consistent across evolutionary timescales. Video abstract.


Assuntos
Elasmobrânquios/microbiologia , Peixes/microbiologia , Tegumento Comum/microbiologia , Metagenômica , Microbiota/genética , Filogenia , Simbiose , Animais , Bactérias/genética , Bactérias/isolamento & purificação
2.
Mar Pollut Bull ; 64(11): 2351-6, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22995785

RESUMO

We analyzed dietary habits and presence of plastic in 589 boluses of Glaucous-winged Gulls (Larus glaucescens) as one of two studies on the impact of plastics on marine life in the US Salish Sea. Volunteers dissected boluses collected (2007-2010) from Protection Island, Washington. Components were separated into 23 food and non-food categories. Plastic was found in 12.2% of boluses, with plastic film being the most common plastic form. No diet specialization was observed. Vegetation was the most abundant component, found in 91.3% of boluses. No relationship was observed between any dietary items and occurrence or type of plastic found. Load and potential ecological impact in the marine environment can be expected to increase concurrently with increasing plastic use and number and variety of plastic sources. Future studies are necessary to understand the impacts of plastic ingestion on this species.


Assuntos
Charadriiformes , Monitoramento Ambiental , Poluentes Ambientais/análise , Plásticos/análise , Animais , Dieta/estatística & dados numéricos , Comportamento Alimentar , Conteúdo Gastrointestinal/química , Washington
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