Cloning and complete sequence characterization of two gypsy moth aminopeptidase-N cDNAs, including the receptor for Bacillus thuringiensis Cry1Ac toxin.

The complete cDNAs corresponding to two distinct gypsy moth (Lymantria dispar) larval gut aminopeptidases, APN1 and lambda APN2, were cloned and sequenced. The 3.4 kilobasepair cDNA of APN1 which encodes a 1017 amino acid prepro-protein corresponds to the previously-identified gypsy moth APN (APN-1) that specifically binds the Cry1Ac delta-endotoxin of Bacillus thuringiensis. Analysis of the primary structure of APN1 revealed a cluster of five potential N-linked glycosylation sites near the N-terminus and a C-terminal sequence characteristic of a putative glycosylphosphatidyl-inositol (GPI) anchor signal sequence. The cDNA of APN1 encodes the N-terminal peptide sequence and nine internal sequences obtained from the purified brush border membrane vesicle Cry1Ac receptor by protein sequencing. The lambda APN2 cDNA encodes a shorter protein with 51% similarity to APN1 that also appears to have a GPI anchor signal sequence. Expression of the APN1 cDNA in a baculovirus vector was confirmed by immunoblotting.

Structure of the gypsy moth vitellogenin gene.

Genomic clones containing the vitellogenin (Vg) gene from the gypsy moth were isolated from two genomic libraries and characterized. The nucleotide sequence of a 16,132 bp region of the gypsy moth genome was determined which included a 3,666 bp region upstream from the transcription initiation site and 499 bp region downstream from the transcribed region. Primer extension analysis was performed to identify the transcription initiation site. Gene sequence confirmed the sequence of VgmRNA recently reported [Hiremath and Lehtoma, J. Insect Biochem. Mol. Biol. (1997) 27:27-35] and indicated that the gypsy moth Vg gene contains seven exons interrupted by six introns. Sequence analysis of the promoter region revealed presence of several motifs associated with sex-specific and developmentally regulated genes in other systems. The nucleotide sequence comparison analyses showed that the gypsy moth Vg gene had considerably similarity with the Bombyx mori Vg gene but not with those from Anthonomous grandis and Aedes aegypti.

Complete nucleotide sequence of the vitellogenin mRNA from the gypsy moth: novel arrangement of the subunit encoding regions.

Primary structure analysis and location of introns suggests evolutionary relatedness among vitellogenin (Vg) genes from vertebrates and invertebrates, including insects. We have determined the complete nucleotide sequence of the gypsy moth VgmRNA, which shows that its structure is significantly different from VgmRNAs in other systems. The nucleotide sequence was determined using overlapping cDNA fragments generated from RACE reactions and rTh polymerase-mediated PCR. The VgmRNA is 5579 nucleotides long and codes for both the large and small subunits. However, the arrangement of the subunit encoding regions in the gypsy moth VgmRNA is opposite of what has been observed in other systems. Gypsy moth Vg gene is the first reported example of a Vg gene where the 5'-terminal region codes for the large subunit and the 3'-terminal region for the small subunit. Also, the sequence near the junction of subunits was significantly different from those found in other insects. This may be responsible for the relatively more stable precursor of Vg subunits found in the gypsy moth hemolymph. It is not clear where this divergence in the structure of Vg gene occurred during evolution, since the Vg gene of another lepidopteran, Bombyx mori, conforms to the structure of those in vertebrates and other invertebrates.

Alternative splicing generates two forms of mRNA coding for human heparin-binding growth factor 1.

Human class 1 heparin-binding growth factor (HBGF-1), also known as acidic fibroblast growth factor, is a mitogen for a variety of mesoderm- and neutroectoderm-derived cells in vitro as well as an angiogenic factor in vivo. Several oncogenes and growth factors have been shown to be homologous to HBGF-1. Four cDNA clones coding for HBGF-1 have been isolated from a human brain stem cDNA library. Nucleotide sequence analysis revealed that alternative splicing generated at least two different forms of HBGF-1 mRNA. Because the difference occurs in the 5'-untranslated regions, these transcripts may result from the usage of alternative promoters. One of the cDNA clones contains the polyadenylation signal, AATAAA, and a poly(A) tail, representing the 3'-end of an HBGF-1 mRNA. RNAase protection assays suggested this cDNA clone corresponds to a minor transcript, and the majority of the HBGF-1 mRNA terminates at 3.1 kbp downstream from the translation termination codon. The biological significance of this unusually long 3'-untranslated sequence is not known. To study the HBGF-1 gene structure, we have isolated 50 kbp of contiguous genomic DNA coding for the HBGF-1 protein. Both restriction enzyme mapping and nucleotide sequencing established that the distance between the first and second protein-coding exons is 13.6 kbp while that between the second and third is 5.3 kbp. By using the HBGF-1 cDNA as a probe, we showed that human fetal heart expresses high levels of HBGF-1 mRNA. Thus, HBGF-1 may be involved in mediating processes such as embryonic development and vascular growth in the heart.

Direct cloning of cDNA inserts from lambda gt11 phage DNA into a plasmid vector by a novel and simple method.

Bacteriophage lambda gt11 has been used quite extensively for producing cDNA libraries. The cDNA inserts are usually subcloned into a plasmid vector for large scale production and analysis. However, isolating the recombinant DNA of interest from the phage clones can be a tedious task. Since the E. coli strain Y1088 used for lambda gt11 phage infection carries a pBR322-derived plasmid endogenously, we reasoned that this endogenous plasmid could be used directly for cloning the cDNA phage insert. In this report, we describe a method in which cDNA inserts from lambda gt11 phage were cloned directly into the pBR322 plasmid vector, bypassing the time-consuming procedures of preparing plasmid DNA as a subcloning vector. This method is likely to be extended to the cloning of DNA inserts derived from other phage lambda vectors when bacteria containing endogenous pBR322 are used as host cells.

Cloning of the gene coding for human class 1 heparin-binding growth factor and its expression in fetal tissues.

We have identified four overlapping genomic DNA clones coding for human class 1 heparin-binding growth factor (HBGF-1), also known as acidic fibroblast growth factor, by screening genomic DNA libraries with an HBGF-1 cDNA probe. The exon-intron structure of the HBGF-1 gene was determined by Southern hybridization and nucleotide sequence analysis. The complete amino acid sequence of human HBGF-1 was deduced from the nucleotide sequence of these genomic DNA clones. The predicted amino acid sequence is identical to the published amino acid sequence determined by protein sequencing. Southern blot analysis of human DNA suggested that there is a single-copy gene coding for HBGF-1. A 4.5-kilobase mRNA and two minor species (3.4 and 2.0 kilobases) homologous to the HBGF-1 gene were detected in cellular RNA isolated from human adult brain and kidney. The HBGF-1 mRNAs from brain and kidney had slightly different sizes. The mechanism for the synthesis of different sizes of mRNA was not determined. We also detected HBGF-1 transcript from glioblastoma cells, fetal brain, and kidney but not from placenta or fetal liver. Since HBGF-1 is an angiogenic factor, these data suggest that it may play a role in embryonic angiogenesis during fetal development.