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2.
Front Cell Infect Microbiol ; 13: 1138174, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38094744

RESUMO

Background: Recently, metagenomic next-generation sequencing (mNGS) has been used in the diagnosis of infectious diseases (IDs) as an emerging and powerful tool. However, whether the complicated methodological variation in mNGS detections makes a difference in their clinical performance is still unknown. Here we conducted a method study on the clinical application of mNGS tests in the DNA detection of IDs. Methods: We analyzed the effect of several potential factors in the whole process of mNGS for DNA detection on microorganism identification in 98 samples of suspected ID patients by amplification-based mNGS. The amplification-based and amplification-free mNGS tests were successfully performed in 41 samples. Then we compared the clinical application of the two mNGS methods in the DNA detection of IDs. Results: We found that a higher concentration of extracted nucleic acid was more conducive to detecting microorganisms. Other potential factors, such as read depth and proportion of human reads, might not be attributed to microorganism identification. The concordance rate of amplification-based and amplification-free mNGS results was 80.5% (33/41) in the patients with suspected IDs. Amplification-based mNGS showed approximately 16.7% higher sensitivity than amplification-free mNGS. However, 4 cases with causative pathogens only detected by amplification-based mNGS were finally proved false-positive. In addition, empirical antibiotic treatments were adjusted in 18 patients following mNGS testing with unexpected pathogens. Conclusions: Amplification-based and amplification-free mNGS tests showed their specific advantages and disadvantages in the diagnosis of IDs. The clinical application of mNGS still needs more exploration from a methodological perspective. With advanced technology and standardized procedure, mNGS will play a promising role in the diagnosis of IDs and help guide the use of antibiotics.


Assuntos
Doenças Transmissíveis , Humanos , Doenças Transmissíveis/diagnóstico , Sequenciamento de Nucleotídeos em Larga Escala , Antibacterianos , Metagenoma , Metagenômica , DNA , Sensibilidade e Especificidade
3.
Org Lett ; 25(41): 7464-7469, 2023 10 20.
Artigo em Inglês | MEDLINE | ID: mdl-37800465

RESUMO

Fortuneicyclidins A and B are a pair of recently isolated Cephalotaxus alkaloids with an unprecedented rearranged polycyclic skeleton possessing multiple complex stereocenters and functionalization. In this work, highly stereocontrolled asymmetric total syntheses for title alkaloids were outlined. Key features include an underexplored Ir-catalyzed α-allylation of aldehyde to strategically install a vicinal N-substituted quaternary center and a tertiary stereocenter, Heck and RCM reactions to construct the critical polycyclic framework rapidly, two different tandem oxidation-transannular aldol cyclization processes, one through ozonolysis and another via Swern oxidation, to forge the last ring for fortuneicyclidins A and B, respectively. In this approach, the challenging C-2 hydroxyl group can be installed stereospecifically.


Assuntos
Alcaloides , Harringtoninas , Estereoisomerismo , Ciclização , Oxirredução
4.
Plants (Basel) ; 12(18)2023 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-37765433

RESUMO

Understanding the water status of specific organs can be helpful in evaluating the life activities and growth conditions of maize. To accurately judge organ growth conditions and thus design appropriate interventions, it is necessary to clarify the true water dynamics of each maize organ. Using multiple maize cultivars with different growth periods, spatio-temporal water dynamics were analyzed here in the leaves, stalks, and ear components. Leaf water content was found to gradually decrease from both the bottom and top of the plant to the middle, whereas stalk water content decreased sequentially from the top to the bottom. Each successively higher node from the bottom of the plant was associated with decreases of 0.99% and 1.27% water content in the leaves and stalks, respectively. The water dynamics in leaves and internodes showed three clear stages: the slow loss, rapid loss, and balance stage. A water content of 60% appeared to be an irreversible turning point for initiation of senescence. Using normalized growth period as a measure, each of the tested cultivars could be assigned into one of two types based on their water dynamics: stay-water or general type. General-type cultivars had a shorter duration with a high water content and a water loss rate approximately twice as high as that of the stay-water type. This may have been related to the leaf senescence characteristics. However, the stay-water trait did not interfere with water dynamics of the ear components. Therefore, it may not be robust to evaluate the kernel dehydration of maize according to leaf senescence conditions due to the weak correlation between kernel water content and leaf senescence characteristics.

5.
Org Lett ; 25(41): 7459-7463, 2023 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-37578250

RESUMO

Cephalotine A, a recently isolated Cephalotaxus alkaloid, was first synthesized enantioselectively through three critical reactions. SmI2 -mediated radical cyclization of lactone and aldehyde to forge the final ring system, Chang's iridium-catalyzed C-H amidation to construct pyrrolidone stereoselectively, and Carreria's dual Ir/amine catalyzed allylation to install the vicinal tertiary stereocenters.

6.
Front Nutr ; 10: 1122045, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37342551

RESUMO

Postmenopausal osteoporosis is one of the most common metabolic diseases in old women, and supplementing estrogen through bioactive substances is one of the important ways to improve menopausal syndrome. Some studies have confirmed that soybean isoflavone has estrogenic activity, and the main active component of soybean isoflavones is isoflavone aglycones. However, few studies have investigated the improvement effect of high-purity soy isoflavone aglycones on postmenopausal osteoporosis. Thus, the effect of different doses of high-purity soybeans isoflavone aglycone on the ovariectomized female osteoporosis rat model was evaluated by oral gavage. The rats were divided into seven experimental groups including SHAM, OVX, EE, SIHP, AFDP-L, AFDP-M, and AFDP-H, which was administered for 60 days from 30 days after ovariectomy. We collected blood from the abdominal aorta of rats on the 30th, 60th, and 90th days respectively, analyzed its serum biochemistry, and took out the femur for micro-CT imaging and bone microstructure parameter analysis. Results showed that the intervention effect of AFDP-H group on osteoporosis rats at 60 and 90 days was similar to that of EE group, and superior to the OVX group, SIHP group, AFDP-L group, AFDP-M group. The AFDP-H group inhibited the decrease in serum bone markers, bone density, trabeculae quantity, trabeculae thickness, and bone volume fraction, and increased the trabecular separation caused by ovariectomy, thereby significantly improving bone microstructure. It also prevented continuous weight gain and increased cholesterol levels in female rats. This study provided theoretical to application of soybean isoflavone aglycone in the intervention of osteoporosis. and confirmed that could replace chemical synthetic estrogen drugs.

7.
Se Pu ; 41(6): 482-489, 2023 Jun 08.
Artigo em Chinês | MEDLINE | ID: mdl-37259872

RESUMO

Disinfection of drinking water is critical to prevent waterborne diseases. An unexpected consequence of water disinfection is the formation of disinfection by-products by the interaction of disinfectants with organic matter (natural or anthropogenic) and halides, which present significant toxicological effects and carcinogenic risks. As an emerging disinfection by-product, halobenzoquinones (HBQs) have attracted increasing attention owing to their severe toxicity and high detection rates. The credible determination of HBQs is essential for further studies on their occurrence, toxicity, and control measures; however, HBQs are usually detected in drinking water at trace levels. Therefore, accurate and efficient analytical techniques are critical for HBQ determination and quantitation. In this study, a method based on solid phase extraction (SPE) combined with ultra performance liquid chromatography-triple quadrupole mass spectrometry (UPLC-MS/MS) was developed to determine 13 HBQs, including six chlorobenzoquinones, six bromobenzoquinones, and one iodobenzoquinone, in drinking water. One-liter water samples were added with 2.5 mL of formic acid, and 500 mL of each sample was collected for further enrichment. Pretreatment optimization mainly focused on the SPE column, washing solvent, and nitrogen blowing temperature. After extraction using Plexa SPE columns (200 mg/6 mL), the samples were washed with ultrapure water containing 0.25% formic acid combined with 30% methanol aqueous solution containing 0.25% formic acid, eluted with 6 mL of methanol containing 0.25% formic acid, and then nitrogen blown at 30 ℃. The UPLC-MS/MS parameters were optimized by comparing the results of two reversed-phase columns (BEH C18 and HSS T3) and various concentrations of formic acid in the mobile phase, as well as by establishing the best instrumental conditions. The separation of 13 HBQs was performed using an HSS T3 column (100 mm×2.1 mm, 1.8 µm) via gradient elution with a mixture of 0.1% formic acid aqueous solution and methanol as the mobile phase for 16 min. The 13 HBQs were detected using a triple quadrupole mass spectrometer equipped with a negative electrospray ionization source (ESI-) in multiple reaction monitoring (MRM) mode. Matrix-matched calibration curves were used to quantify the HBQs owing to intense matrix inhibitory effects. The results reflected the good linear relationships of the 13 HBQs and yielded correlation coefficients (r) greater than 0.999. The method detection limits (MDLs, S/N=3) were 0.2-10.0 ng/L, while the method quantification limits (MQLs, S/N=10) were 0.6-33.0 ng/L. The recoveries of the 13 HBQs were 56%-88% at three spiked levels (10, 20, 50 ng/L), and the relative standard deviations (RSDs, n=6) were less than or equal to 9.2%. The optimization method was applied to analyze HBQs in five drinking water samples. Four HBQs, namely, 2,6-dichloro-1,4-benzoquinone (2,6-DCBQ), 2,5-dibromo-1,4-benzoquinone (2,5-DBBQ), 2,6-dibromo-1,4-benzoquinone (2,6-DBBQ), and 2,6-dibromo-3,5-dimethyl-1,4-benzoquinone (2,6-DBDMBQ), were detected in the samples with detection rates of 100%, 20%, 80%, and 20%, respectively. The most frequently detected HBQ, 2,6-DCBQ, also exhibited the highest content (15.0-56.2 ng/L). The method showed high sensitivity, stability, accuracy, and efficiency, rendering it suitable for the analysis of 13 HBQs in drinking water. Compared with previous methods that mainly focused on 2,6-DCBQ and 2,6-DBBQ, the developed method achieved higher throughput and enabled the simultaneous analysis of 13 HBQs. The method presented in this study provides an opportunity to explore different types and concentrations of HBQs in drinking water, offers a deeper understanding of the occurrence of HBQs, and facilitates further studies on the health risks and control measures of these compounds.


Assuntos
Água Potável , Cromatografia Líquida , Água Potável/análise , Desinfecção/métodos , Espectrometria de Massas em Tandem , Metanol/análise , Benzoquinonas/análise , Benzoquinonas/química , Extração em Fase Sólida , Cromatografia Líquida de Alta Pressão
8.
Food Chem ; 413: 135575, 2023 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-36764160

RESUMO

Inhibition of peel de-greening in postharvest bananas under high temperature storage, resulting in green ripening, causes significant deterioration in fruit quality. Herein, we reported that cold treatment accelerated chlorophyll degradation of postharvest banana fruit at 30 °C, which was associated with the upregulated expression of MaCBR (Chlorophyll b reductase) and MaSGR1 (Stay-green 1). Moreover, cold treatment increased the expression of C-repeat binding factor MaCBF1. MaCBF1 bound directly to the promoters of MaCBR and MaSGR1 and activated their expressions. More importantly, transient expression of MaCBF1 in bananas enhanced chlorophyll degradation and weakened the repression of de-greening caused by high temperature. In summary, the cold treatment promotes chlorophyll catabolism by activating MaCBF1-induced transcriptional activation of MaCBR and MaSGR1, and attenuates high temperature-caused green ripening in bananas. These results study expand the understanding of the molecular events of high temperature-inhibited chlorophyll degradation and provide a feasible strategy to alleviate green ripening of banana fruit.


Assuntos
Musa , Musa/química , Temperatura Baixa , Temperatura Alta , Regiões Promotoras Genéticas , Clorofila/análise , Frutas/química , Regulação da Expressão Gênica de Plantas , Proteínas de Plantas/metabolismo
9.
J Agric Food Chem ; 70(39): 12372-12382, 2022 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-36129378

RESUMO

Usually, the recognition of sex pheromone signals is restricted to adult moths. Here, our behavioral assay showed that fourth-instar Spodoptera litura larvae are attracted to cabbage laced with minor sex pheromones Z9,E12-tetradecadienyl acetate (Z9,E12-14:Ac) or Z9-tetradecenyl acetate (Z9-14:Ac). Seven odorant-binding proteins (OBPs) were upregulated after exposure to Z9,E12-14:Ac, and one OBP was upregulated after exposure to Z9-14:Ac. Fluorescence competitive binding assays showed that GOBP2 and OBP7 bound to sex pheromones. RNAi treatment significantly downregulated GOBP2 and OBP7 mRNA expression by 70.37 and 63.27%, respectively. The siOBP-treated larvae were not attracted to Z9,E12-14:Ac or Z9-14:Ac, and the corresponding preference indices were significantly lower than those in siGFP-treated larvae. Therefore, we concluded that GOBP2 and OBP7 are involved in the attraction of S. litura larvae to food containing Z9,E12-14:Ac and Z9-14:Ac. These results provide an important basis for exploring the olfactory mechanisms underlying sex pheromone attraction in moth larvae.


Assuntos
Mariposas , Atrativos Sexuais , Animais , Larva/genética , Larva/metabolismo , Mariposas/genética , Odorantes , Feromônios/metabolismo , RNA Mensageiro/metabolismo , Atrativos Sexuais/metabolismo , Atrativos Sexuais/farmacologia , Spodoptera/genética , Spodoptera/metabolismo
10.
Food Res Int ; 157: 111296, 2022 07.
Artigo em Inglês | MEDLINE | ID: mdl-35761601

RESUMO

Banana fruit is prone to chilling injury (CI) during cold storage, resulting in quality deterioration and commodity reduction. The hot water treatment (HWT), dipping banana fruit in hot water (52 °C) for 3 min, reduced CI symptom at 7 °C storage. The purpose of this study was to investigate the potential molecular mechanism of HWT on the alleviation of CI of postharvest banana fruit. It was found that HWT treatment obviously inhibited the increases in CI index, relative electrolytic leakage, and the contents of malonaldehyde (MDA) and O2•-, while enhanced proline accumulation. Further transcriptome analysis in the pericarp of banana fruit was evaluated during storage. The results showed that differentially expressed genes (DEGs) in the comparison between control and HWT group were mainly enriched in photosynthesis, chlorophyll metabolism, lipid metabolism, glutathione metabolism, and brassinosteroid and carotenoid biosynthesis. Moreover, transcriptome expression profiles and RT-qPCR analyses exhibited that the corresponding genes involved in these metabolism pathways and heat shock proteins (HSPs) were upregulated by HWT during cold storage. In general, our findings clearly reveal the potential pathways by which HWT alleviates CI in banana fruit, enriching the theoretical basis for the application of hot water to reduce CI in fruits.


Assuntos
Musa , Purificação da Água , Frutas/metabolismo , Musa/genética , Musa/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Transcriptoma
11.
Bull Entomol Res ; 112(1): 78-90, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-35225175

RESUMO

Spodoptera litura is an important pest that causes significant economic damage to numerous crops worldwide. Sex pheromones (SPs) mediate sexual communication in S. litura and show a characteristic degree of rhythmic activity, occurring mainly during the scotophase; however, the specific regulatory mechanisms remain unclear. Here, we employed a genome-wide analysis to identify eight candidate circadian clock genes in S. litura. Sequence characteristics and expression patterns were analyzed. Our results demonstrated that some circadian clock genes might regulate the biosynthesis and perception of SPs by regulating the rhythmic expression of SP biosynthesis-related genes and SP perception-related genes. Interestingly, all potential genes exhibited peak expression in the scotophase, consistent with the SP could mediate courtship and mating behavior in S. litura. Our findings are helpful in elucidating the molecular mechanism by which circadian clock genes regulate sexual communication in S. litura.


Assuntos
Relógios Circadianos , Atrativos Sexuais , Animais , Relógios Circadianos/genética , Comunicação , Atrativos Sexuais/metabolismo , Spodoptera/fisiologia
12.
Bull Entomol Res ; 112(4): 536-545, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35199636

RESUMO

Athetis lepigone Möschler (Lepidoptera, Noctuidae) is a common maize pest in Europe and Asia. However, there is no long-term effective management strategy is available yet to suppress its population. Adults rely heavily on olfactory cues to locate their optimal host plants and oviposition sites. Pheromone-binding proteins (PBPs) are believed to be responsible for recognizing and transporting different odorant molecules to interact with receptor membrane proteins. In this study, the ligand-binding specificities of two AlepPBPs (AlepPBP2 and AlepPBP3) for sex pheromone components and host plant (maize) volatiles were measured by fluorescence ligand-binding assay. The results demonstrated that AlepPBP2 had a high affinity with two pheromones [(Z)-7-dodecenyl acetate, Ki = 1.11 ± 0.1 µM, (Z)-9-tetradecenyl acetate, Ki = 1.32 ± 0.15 µM] and ten plant volatiles, including (-)-limonene, α-pinene, myrcene, linalool, benzaldehyde, nonanal, 2-hexanone, 3-hexanone, 2-heptanone and 6-methyl-5-hepten-2-one. In contrast, we found that none of these chemicals could bind to AlepPBP3. Our results clearly show no significant differences in the functional characterization of the binding properties between AlepPBP2 and AlepPBP3 to sex pheromones and host plant volatiles. Furthermore, molecular docking was employed for further detail on some crucial amino acid residues involved in the ligand-binding of AlepPBP2. These findings will provide valuable information about the potential protein binding sites necessary for protein-ligand interactions which appear as attractive targets for the development of novel technologies and management strategies for insect pests.


Assuntos
Mariposas , Receptores Odorantes , Atrativos Sexuais , Animais , Proteínas de Transporte/metabolismo , Feminino , Proteínas de Insetos/metabolismo , Ligantes , Simulação de Acoplamento Molecular , Mariposas/metabolismo , Feromônios/metabolismo , Receptores Odorantes/metabolismo , Atrativos Sexuais/metabolismo , Zea mays/metabolismo
13.
Br J Radiol ; 95(1133): 20210380, 2022 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-35084210

RESUMO

OBJECTIVE: Deep learning image reconstruction (DLIR) is a new reconstruction method for maintaining image quality at reduced radiation dose. The purpose of this study was to compare image quality of reduced-dose DLIR images with the standard-dose adaptive statistical iterative reconstruction (ASIR-V) images in chest CT. METHODS: Our prospective study included 48 adult patients (30 women and 18 men, mean age ±SD, 49.8 ± 14.3 years) who underwent both the standard-dose CT (SDCT) and low-dose CT (LDCT) on a GE Revolution CT scanner. All patients gave written informed consent. All scans were reconstructed with ASIR-V40%. Additionally, LDCT scans were reconstructed with DLIR with high-setting (DLIR-H) and medium-setting (DLIR-M). Image noise and contrast-noise-ratio (CNR) of thoracic aorta with different reconstruction modes were measured and compared. RESULTS: LDCT reduced radiation dose by 96% compared with SDCT (CTDIvol: 0.54mGy vs 12.46mGy). In LDCT, DLIR significantly reduced image noise compared with the state-of-the-art ASIR-V40% with DLIR-H provided the lowest image noise and highest image quality score. In addition, the image noise, CNR of aorta and overall image quality of the low-dose DLIR-H images did not have significant difference compared with the SDCT ASIR-V40% images (all p > 0.05). CONCLUSION: DLIR significantly reduces image noise in LDCT chest scans and provides similar image quality as the SDCT ASIR-V images at 4% of the radiation dose. ADVANCES IN KNOWLEDGE: DLIR uses high-quality FBP data to train deep neural networks to learn how to distinguish between signal and noise, and effectively suppresses noise without affecting anatomical and pathological structures. It opens a new era of CT image reconstruction. DLIR significantly reduces image noise and improves image quality compared with ASIR-V40% under same radiation dose condition. DLIR-H achieves similar image quality at 4% radiation dose as ASIR-V40% at standard-dose level in non-contrast chest CT.


Assuntos
Aprendizado Profundo , Adulto , Algoritmos , Feminino , Humanos , Processamento de Imagem Assistida por Computador , Masculino , Estudos Prospectivos , Doses de Radiação , Interpretação de Imagem Radiográfica Assistida por Computador/métodos , Tomografia Computadorizada por Raios X/métodos
14.
Pest Manag Sci ; 78(1): 52-62, 2022 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-34418275

RESUMO

BACKGROUND: Athetis lepigone, a noctuid moth feeding on more than 30 different crops worldwide, has evolved a sophisticated, sensitive, and specific chemosensory system to detect and discriminate exogenous chemicals. Odorant-binding proteins (OBPs) are the most important agent in insect chemosensory systems to be explored as an alternative target for environmentally friendly approaches to pest management. RESULTS: To investigate the olfactory function of A. lepigone OBPs (AlepOBPs), AlepOBP6 was identified and expressed in Escherichia coli. The binding affinity of the recombinant OBP to 20 different ligands was then examined using a competitive binding approach. The results revealed that AlepOBP6 can bind to two sex pheromones and ten maize volatiles, and its conformation stability is pH dependent. We also carried out a structure-function study using different molecular approaches, including structure modeling, molecular docking, and a mutation functional assay to identify amino acid residues (M39, V68, W106, Q107, and Y114) involved in the binding of AlepOBP6 to both sex pheromones and maize volatiles in A. lepigone. CONCLUSION: These results suggest that AlepOBP6 is likely involved in mediating the responses of A. lepigone to sex pheromones and maize volatiles, which may play a pivotal function in mating, feeding, and oviposition behaviors. This study not only provides new insight into the binding mechanism of OBPs to sex pheromones and host volatiles in moths, but also contributes to the discovery of novel target candidates for developing efficient behavior disruptors to control A. lepigone in the future. © 2021 Society of Chemical Industry.


Assuntos
Mariposas , Receptores Odorantes , Atrativos Sexuais , Animais , Feminino , Proteínas de Insetos/genética , Ligantes , Simulação de Acoplamento Molecular , Feromônios , Receptores Odorantes/genética , Zea mays
15.
Radiat Res ; 197(2): 157-165, 2022 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-34644380

RESUMO

To investigate the optimal pre- and post-adaptive statistical iterative reconstruction-V (ASiR-V) levels in pediatric abdominal computed tomography (CT) to minimize radiation exposure and maintain image quality using an animal model. A total of 10 standard piglets were selected and scanned to obtain unenhanced and enhanced images under different pre-ASiR-V conditions. The corresponding images were obtained using ASiR-V algorithm at different post-ASiR-V levels. CT value, signal-to-noise ratio (SNR), contrast noise ratio (CNR) of abdominal tissues, subjective image score, and radiation dose of unenhanced and enhanced scans were analyzed. With the increase of pre-ASiR-V level, the radiation dose in piglets gradually decreased (P < 0.05). Within the same group of pre-ASiR-V, the image noise was decreased (P < 0.05) by increasing post-ASiR-V level. There was no statistical difference between SNR and CNR values. In unenhanced CT, the subjective score of the images with the combination of 40% pre- and 60% post-ASiR-V levels had no statistical difference compared to the combination of 0% pre- and 60% post-ASiR-V levels, while the radiation dose decreased by 31.6%. In the enhanced CT, the subjective image score with the 60% pre- and 60% post-ASiR-V combination had no statistical difference compared to the 0% pre- and 60% post-ASiR-V combination, while the radiation dose was reduced by 48.9%. The combined use of pre- and post-ASiR-V maintains image quality at the reduced radiation dose. The optimal level for unenhanced CT is 40% pre-combined with 60% post-ASiR-V, while that for enhanced CT is 60% pre-combined with 60% post-ASiR-V in pediatric abdominal CT.


Assuntos
Doses de Radiação
16.
Front Bioeng Biotechnol ; 9: 689797, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34239862

RESUMO

Over the past decades, remarkable progress on phosphoramidite chemistry-based large-scale de novo oligonucleotide synthesis has been achieved, enabling numerous novel and exciting applications. Among them, de novo genome synthesis and DNA data storage are striking. However, to make these two applications more practical, the synthesis length, speed, cost, and throughput require vast improvements, which is a challenge to be met by the phosphoramidite chemistry. Harnessing the power of enzymes, the recently emerged enzymatic methods provide a competitive route to overcome this challenge. In this review, we first summarize the status of large-scale oligonucleotide synthesis technologies including the basic methodology and large-scale synthesis approaches, with special focus on the emerging enzymatic methods. Afterward, we discuss the opportunities and challenges of large-scale oligonucleotide synthesis on de novo genome synthesis and DNA data storage respectively.

17.
Adv Rheumatol ; 61(1): 36, 2021 06 12.
Artigo em Inglês | MEDLINE | ID: mdl-34118994

RESUMO

OBJECTIVES: To investigate the diagnostic performance of single-source dual-energy computed tomography (DECT) based on gemstone spectral imaging technology (including Discovery CT750HD and Revolution CT) in patients with suspected feet/ankles gouty arthritis, and evaluate the urate deposition with a novel semi-quantitative DECT scoring system. METHODS: A total of 196 patients were consecutively included. Feet and ankles were evaluated in all patients by single-source DECT scan. The 2015 EULAR/ACR criteria were used as the reference for the diagnosis of gout. The sensitivity, specificity, and area under the receiver operating characteristic curve (AUC) of DECT for the diagnosis of gout in the early (≤1 year), middle (1-3 years), and late (> 3 years) disease durations were calculated. Besides, a novel semi-quantitative DECT scoring system was assessed for the measurement of urate deposition, and the correlation between the scores and the clinical and serological data were also evaluated. Moreover, the influences of artifacts on the diagnostic performance of DECT were also determined. RESULTS: The sensitivity, specificity, and AUC of DECT in 196 patients were 38.10, 96.43%, and 0.673 in the early-stage group; 62.96, 100.00%, and 0.815 in the middle-stage group; and 77.55, 87.50%, and 0.825 in the late-stage group, respectively. The overall diagnostic accuracies in the AUC of DECT (Discovery CT750HD and Revolution CT) in the middle and late stages of gout were higher than that in the early stage of gout. Besides, the monosodium urate crystals were deposited on the first metatarsophalangeal joints and ankles/midfeet. Age, the presence of tophus, bone erosion, and disease duration considerably affected the total urate score. No statistical difference in the positive detection of nail artifact, skin artifact, vascular calcification, and noise artifact was found between the case and control groups. CONCLUSION: DECT (Discovery CT750HD and Revolution CT) showed promising diagnostic accuracy for the detection of urate crystal deposition in gout but had limited diagnostic sensitivity for short-stage gout. Longer disease duration, the presence of tophus, and bone erosion were associated with the urate crystal score system. The artifacts do not remarkably affect the diagnostic performance of DECT in gout.


Assuntos
Gota , Tornozelo/diagnóstico por imagem , Artrite Gotosa/diagnóstico por imagem , Gota/diagnóstico por imagem , Humanos , Tomografia Computadorizada por Raios X , Ácido Úrico
18.
J Xray Sci Technol ; 29(2): 361-372, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33612538

RESUMO

OBJECTIVES: To explore the feasibility of achieving diagnostic images in low-dose abdominal CT using a Deep Learning Image Reconstruction (DLIR) algorithm. METHODS: Prospectively enrolled 47 patients requiring contrast-enhanced abdominal CT scans. The late-arterial phase scan was added and acquired using lower-dose mode (tube current range, 175-545 mA; 80 kVp for patients with BMI ≤24 kg/m2 and 100 kVp for patients with BMI > 24 kg/m2) and reconstructed with DLIR at medium setting (DLIR-M) and high setting (DLIR-H), ASIR-V at 0% (FBP), 40% and 80% strength. Both the quantitative measurement and qualitative analysis of the five types of reconstruction methods were compared. In addition, radiation dose and image quality between the early-arterial phase ASIR-V images using standard-dose and the late-arterial phase DLIR images using low-dose were compared. RESULTS: For the late-arterial phase, all five reconstructions had similar CT value (P > 0.05). DLIR-H, DLIR-M and ASIR-V80% images significantly reduced the image noise and improved the image contrast noise ratio, compared with the standard ASIR-V40% images (P < 0.05). ASIR-V80% images had undesirable image characteristics with obvious "waxy" artifacts, while DLIR-H images maintained high spatial resolution and had the highest subjective image quality. Compared with the early-arterial scans, the late-arterial phase scans significantly reduced the radiation dose (P < 0.05), while the DLIR-H images exhibited lower image noise and good display of the specific image details of lesions. CONCLUSIONS: DLIR algorithm improves image quality under low-dose scan condition and may be used to reduce the radiation dose without adversely affecting the image quality.


Assuntos
Aprendizado Profundo , Algoritmos , Estudos de Viabilidade , Humanos , Processamento de Imagem Assistida por Computador , Doses de Radiação , Interpretação de Imagem Radiográfica Assistida por Computador , Tomografia Computadorizada por Raios X
19.
Bull Entomol Res ; 111(4): 454-463, 2021 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-33632348

RESUMO

The tobacco cutworm Spodoptera litura (Lepidoptera: Noctuidae) is a polyphagous pest with a highly selective and sensitive chemosensory system involved in complex physiological behaviors such as searching for food sources, feeding, courtship, and oviposition. However, effective management strategies for controlling the insect pest populations under threshold levels are lacking. Therefore, there is an urgent need to formulate eco-friendly pest control strategies based on the disruption of the insect chemosensory system. In this study, we identified 158 putative chemosensory genes based on transcriptomic and genomic data for S. litura, including 45 odorant-binding proteins (OBPs, nine were new), 23 chemosensory proteins (CSPs), 60 odorant receptors (ORs, three were new), and 30 gustatory receptors (GRs, three were new), a number higher than those reported by previous transcriptome studies. Subsequently, we constructed phylogenetic trees based on these genes in moths and analyzed the dynamic expression of various genes in head capsules across larval instars using quantitative real-time polymerase chain reaction. Nine genes-SlitOBP8, SlitOBP9, SlitOBP25, SlitCSP1, SlitCSP7, SlitCSP18, SlitOR34, SlitGR240, and SlitGR242-were highly expressed in the heads of 3- to 5-day-old S. litura larvae. The genes differentially expressed in olfactory organs during larval development might play crucial roles in the chemosensory system of S. litura larvae. Our findings substantially expand the gene inventory for S. litura and present potential target genes for further studies on larval feeding in S. litura.


Assuntos
Genes de Insetos , Proteínas de Insetos/genética , Receptores Odorantes/genética , Spodoptera/genética , Animais , Feminino , Cabeça , Proteínas de Insetos/metabolismo , Larva/metabolismo , Masculino , Receptores Odorantes/metabolismo , Spodoptera/metabolismo , Transcriptoma
20.
Front Cell Dev Biol ; 9: 736267, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-35059394

RESUMO

As a primary cause of dementia and death in older people, Alzheimer's disease (AD) has become a common problem and challenge worldwide. Abnormal accumulation of tau proteins in the brain is a hallmark pathology of AD and is closely related to the clinical progression and severity of cognitive deficits. Here, we found that overexpression of phosphatase and tensin homolog (PTEN)-induced kinase 1 (PINK1) effectively promoted the degradation of tau, thereby rescuing neuron loss, synaptic damage, and cognitive impairments in a mouse model of tauopathy with AAV-full-length human Tau (hTau) injected into the hippocampal CA1 area (hTau mice). Overexpression of PINK1 activated autophagy, and chloroquine but not MG132 reversed the PINK1-induced decrease in human Tau levels and cognitive improvement in hTau mice. Furthermore, PINK1 also ameliorated mitochondrial dysfunction induced by hTau. Taken together, our data revealed that PINK1 overexpression promoted degradation of abnormal accumulated tau via the autophagy-lysosome pathway, indicating that PINK1 may be a potential target for AD treatment.

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