Dense city centers support less evolutionary unique bird communities than sparser urban areas.

Urbanization alters avian communities, generally lowering the number of species and contemporaneously increasing their functional relatedness, leading to biotic homogenization. Urbanization can also negatively affect the phylogenetic diversity of species assemblages, potentially decreasing their evolutionary distinctiveness. We compare species assemblages in a gradient of building density in seventeen European cities to test whether the evolutionary distinctiveness of communities is shaped by the degree of urbanization. We found a significant decline in the evolutionary uniqueness of avian communities in highly dense urban areas, compared to low and medium-dense areas. Overall, communities from dense city centers supported one million years of evolutionary history less than communities from low-dense urban areas. Such evolutionary homogenization was due to a filtering process of the most evolutionarily unique birds. Metrics related to evolutionary uniqueness have to play a role when assessing the effects of urbanization and can be used to identify local conservation priorities.

Variation in bill surface area is associated with local climatic factors across populations of the plain laughingthrush.

Recent studies have found that avian bill and tarsus morphology may have evolved in response to climatic conditions, and these organs play important roles in thermoregulation and water retention in extreme environments. Here, we examined whether bill surface area and tarsus length were associated with climatic conditions in the plain laughingthrush, Garrulax davidi, which mainly occurs in north China and occupies several climatic zones from east to west. We measured bill surface area and tarsus length in 321 adults from 11 populations, almost encompassing all habitat types of the species. We analyzed the relationships among these morphological traits and local climatic factors. Bill surface area was positively correlated with maximum temperature, indicating that bill surface area tended to be larger in hotter environments. Furthermore, we found a negative relationship among bill surface area and winter precipitation, indicating that bill surface area tended to be larger in arid areas. However, we did not find any relationships between tarsus length and climatic factors. These results suggest that local climates may shape the evolution of bill morphology divergence, and summer seems to be the critical season for thermoregulation in this temperate zone passerine.

Defensive tolerance to parasitism is correlated with sexual selection in swallows.

Parasite-mediated sexual selection has been the topic of extensive research and enthusiastic debate for more than three decades. Here, we suggest that secondary sexual characters may not only signal parasite resistance but also defensive tolerance. We exemplify this possibility by analysing information on two sexually selected traits, annual reproductive success, and ectoparasitism in a barn swallow Hirundo rustica population followed for more than 30 years. For each individual, we estimated the slope of the association between reproductive success and parasitism as an index of tolerance and subsequently explored the association with the expression of the sexually selected traits. In accordance with expectations of parasites playing a role in sexual selection, tail length was negatively related to load of chewing lice and nest size was positively related to tolerance to chewing lice. We discuss the importance of considering defensive tolerance for understanding the role of parasite-mediated sexual selection.

Long-term consistency in susceptibility of prey species to predation by an avian predator.

Selection by predators affects prey through competition for limiting resources. This not only has consequences for direct mortality but also indirectly affects disturbance. Changes in the intensity of selection on prey by predators may affect the size of prey populations, with consequences for their short- or long-term interactions. We assessed whether predation by northern goshawks Accipiter gentilis modified the composition of prey communities consistently along a temporal gradient, showing long-term consistency in susceptibility of prey species to predation. We followed six populations of the goshawk in two biomes in Denmark and Finland during 1949-2019. Susceptibility to goshawk predation in 2005-2017 in Denmark was only weakly related to susceptibility to goshawk predation in 1977-2004. In Finland, susceptibility of shared prey species to goshawk predation was positively related between periods. The average difference in susceptibility to goshawk predation between periods was considerably higher in Denmark than in Finland. Susceptibility of prey species to predation in goshawks increased with latitude and body mass of prey species, and decreased with period of time and population density of prey species. The changes in susceptibility to predation suggest changes in the characteristics of the local prey pools.

Lockdown effects on fear revealed direct and indirect effects of human presence on perceived predation risk.

The Covid-19 lockdown reduced drastically human presence outdoors, providing an uncontrolled experiment for disentangling direct and indirect effects of human presence on animal fearfulness. We measured 18,494 flight initiation distances (FIDs, the distance at which individual animals fly away when approached by a human) from 1333 populations of 202 bird species taken in four European cities both before, during and after the lockdown. FIDs decreased during lockdown in rural habitats but increased in urban habitats, especially for singing birds. Height above ground increases during lockdown in non-singing birds only, and birds adjusted horizontal tolerance to approach according to height outside lockdown, in rural habitats and while not singing. Responses showed lagged effects after lockdown in urban but not in rural habitats. Differential responses to lockdown among habitats and between signing and non-singing birds were consistent with relaxation of direct disturbance effects on birds in rural habitats during lockdown, as well as with increased indirect fear effects mediated by predator release in cities. FIDs seemed to measure the balance of direct and indirect effects of humans on predations risk and food needs rather than direct effects of humans on fear.

EVI and NDVI as proxies for multifaceted avian diversity in urban areas.

Most ecological studies use remote sensing to analyze broad-scale biodiversity patterns, focusing mainly on taxonomic diversity in natural landscapes. One of the most important effects of high levels of urbanization is species loss (i.e., biotic homogenization). Therefore, cost-effective and more efficient methods to monitor biological communities' distribution are essential. This study explores whether the Enhanced Vegetation Index (EVI) and the Normalized Difference Vegetation Index (NDVI) can predict multifaceted avian diversity, urban tolerance, and specialization in urban landscapes. We sampled bird communities among 15 European cities and extracted Landsat 30-meter resolution EVI and NDVI values of the pixels within a 50-m buffer of bird sample points using Google Earth Engine (32-day Landsat 8 Collection Tier 1). Mixed models were used to find the best associations of EVI and NDVI, predicting multiple avian diversity facets: Taxonomic diversity, functional diversity, phylogenetic diversity, specialization levels, and urban tolerance. A total of 113 bird species across 15 cities from 10 different European countries were detected. EVI mean was the best predictor for foraging substrate specialization. NDVI mean was the best predictor for most avian diversity facets: taxonomic diversity, functional richness and evenness, phylogenetic diversity, phylogenetic species variability, community evolutionary distinctiveness, urban tolerance, diet foraging behavior, and habitat richness specialists. Finally, EVI and NDVI standard deviation were not the best predictors for any avian diversity facets studied. Our findings expand previous knowledge about EVI and NDVI as surrogates of avian diversity at a continental scale. Considering the European Commission's proposal for a Nature Restoration Law calling for expanding green urban space areas by 2050, we propose NDVI as a proxy of multiple facets of avian diversity to efficiently monitor bird community responses to land use changes in the cities.

An explanation for negligible senescence in animals.

Negligible or negative senescence occurs when mortality risk is stable or decreases with age, and has been observed in some wild animals. Age-independent mortality in animals may lead to an abnormally long maximum individual lifespans and be incompatible with evolutionary theories of senescence. The reason why there is no evidence of senescence in these animals has not been fully understood. Recovery rates are usually very low for wild animals with high dispersal ability and/or small body size (e.g., bats, rodents, and most birds). The only information concerning senescence for most of these species is the reported lifespan when individuals are last seen or caught. We deduced the probability density function of the reported lifespan based on the assumption that the real lifespan corresponding to Weibull or Gompertz distribution. We show that the magnitude of the increase in mortality risk is largely underestimated based on the reported lifespans with low recovery probability. The risk of mortality can aberrantly appear to have a negative correlation with age when it actually increases with increasing lifespan. We demonstrated that the underestimated aging rate for wild animals with low recovery probability can be generalizable to any aging models. Our work provides an explanation for the appearance of negligible senescence in many wild animals. Humans attempt to obtain insights from other creatures to better understand our own biology and its gain insight into how to enhance and extended human health. Our advice is to take a second glance before admiring the negligible senescence in other animals. This ability to escape from senescence is possibly only as beautiful illusion in animals.

The Mitogenome Relationships and Phylogeography of Barn Swallows (Hirundo rustica).

The barn swallow (Hirundo rustica) poses a number of fascinating scientific questions, including the taxonomic status of postulated subspecies. Here, we obtained and assessed the sequence variation of 411 complete mitogenomes, mainly from the European H. r. rustica, but other subspecies as well. In almost every case, we observed subspecies-specific haplogroups, which we employed together with estimated radiation times to postulate a model for the geographical and temporal worldwide spread of the species. The female barn swallow carrying the Hirundo rustica ancestral mitogenome left Africa (or its vicinity) around 280 thousand years ago (kya), and her descendants expanded first into Eurasia and then, at least 51 kya, into the Americas, from where a relatively recent (<20 kya) back migration to Asia took place. The exception to the haplogroup subspecies specificity is represented by the sedentary Levantine H. r. transitiva that extensively shares haplogroup A with the migratory European H. r. rustica and, to a lesser extent, haplogroup B with the Egyptian H. r. savignii. Our data indicate that rustica and transitiva most likely derive from a sedentary Levantine population source that split at the end of the Younger Dryas (YD) (11.7 kya). Since then, however, transitiva received genetic inputs from and admixed with both the closely related rustica and the adjacent savignii. Demographic analyses confirm this species' strong link with climate fluctuations and human activities making it an excellent indicator for monitoring and assessing the impact of current global changes on wildlife.

The evolutionary history of the polyQ tract in huntingtin sheds light on its functional pro-neural activities.

Huntington's disease is caused by a pathologically long (>35) CAG repeat located in the first exon of the Huntingtin gene (HTT). While pathologically expanded CAG repeats are the focus of extensive investigations, non-pathogenic CAG tracts in protein-coding genes are less well characterized. Here, we investigated the function and evolution of the physiological CAG tract in the HTT gene. We show that the poly-glutamine (polyQ) tract encoded by CAGs in the huntingtin protein (HTT) is under purifying selection and subjected to stronger selective pressures than CAG-encoded polyQ tracts in other proteins. For natural selection to operate, the polyQ must perform a function. By combining genome-edited mouse embryonic stem cells and cell assays, we show that small variations in HTT polyQ lengths significantly correlate with cells' neurogenic potential and with changes in the gene transcription network governing neuronal function. We conclude that during evolution natural selection promotes the conservation and purity of the CAG-encoded polyQ tract and that small increases in its physiological length influence neural functions of HTT. We propose that these changes in HTT polyQ length contribute to evolutionary fitness including potentially to the development of a more complex nervous system.

Nest size matters: common cuckoos prefer to parasitize larger nests of Oriental reed warblers.

Avian brood parasites leave parental care of their offspring to foster parents. Theory predicts that parasites should select for large host nests when they have sufficient available host nests at a given time. We developed an empirical experimental design to test cognitive ability of female cuckoos in nest size by studying nest choice of common cuckoos (Cuculus canorus) among nests of its Oriental reed warbler (Acrocephalus orientalis) hosts. We presented three groups of experimental nests: 1) nest dyads tied together including one large and one small artificial nest from reed leaves, 2) nest triads tied together used the old modified warbler's own nests including enlarged, reduced and medium-sized nests, and 3) nest dyads are similar to group 1, but not tied together to elicit parasitism by common cuckoos. We predict that cuckoos prefer larger nest than medium one, the next is smaller nest. Our findings showed that common cuckoo females generally prefer large nests over medium or small sized nests in all three experimental groups. Furthermore, cuckoo parasitism was significantly more common than in previous studies of the same warbler population, implying that larger, higher and more exposed host nests effectively increased the probability of cuckoo parasitism.

A dataset of bird distributions in zoogeographical regions of China.

Background: China, the largest country in Asia, has a land area of approximately 9.6 million square kilometres. There are 1481 bird species (following the taxonomy of IOC World Bird List version 12.1) recorded in two zoogeographical realms, seven regions and 19 subregions in the country. From 1955 to 2017, six authoritative monographs were published, which recorded the distribution area for all bird species in China and were widely quoted by research papers and field guides. This massive amount of data could be used to address many hot topics in ornithology, biogeography and ecology. However, rapid changes in the taxonomic status and different schemes of zoogeographical regionalisation in these six monographs provided limits to the utilisation of these valuable data. New information: By integrating the data from the six monographs, we presented an open-access dataset on the occurrences and residence types of all Chinese bird species in zoogeographical regions over the past 60 years. The taxonomic statuses for these species were determined following the IOC World Bird List version 12.1 and the zoogeographical regions were based on the updated scheme. These data provide valuable information for the research in bird ecology and conservation biology.

Personality of hosts and their brood parasites.

Brood parasites such as the common cuckoo Cuculus canorus exploit the parental abilities of their hosts, hosts avoid brood parasitism and predation by showing specific behavior such as loss of feathers, emission of fear screams and contact calls, displaying wriggle behavior to avoid hosts or potential prey, pecking at hosts and prey, and expressing tonic immobility (showing behavior like feigning death or rapid escape from predators and brood parasites). These aspects of escape behavior are consistent for individuals but also among sites, seasons, and years. Escape behavior expressed in response to a broad range of cuckoo hosts and prey are consistently used against capture by humans, but also hosts and brood parasites and predators and their prey. An interspecific comparative phylogenetic analysis of escape behavior by hosts and their brood parasites and prey and their predators revealed evidence of consistent behavior when encountering potential parasites or predators. We hypothesize that personality axes such as those ranging from fearfulness to being bold, and from neophobic to curiosity response in brood parasites constitute important components of defense against brood parasitism that reduces the overall risk of parasitism.

Coevolution between Himalayan cuckoos and 2 sympatric Pycnonotidae hosts.

Selection due to cuckoo parasitism is responsible for the evolution of anti-parasitism defenses in hosts. Different host species breeding sympatrically with a single parasitic cuckoo may evolve different strategies to reduce the risk of counter cuckoo parasitism, resulting in different interactions between cuckoos and hosts in areas of sympatry. Here, we studied the coevolutionary interactions between Himalayan cuckoos Cuculus saturatus and 2 sympatric and closely related potential hosts belonging to the family Pycnonotidae, the brown-breasted bulbul Pycnonotus xanthorrhous and the collared finchbill Spizixos semitorques. We investigated parasitism rates and nest-site selection (nest height, nest cover, human disturbance, perch height, forest distance, and degree of concealment) related to parasitism risk, nest defense against a cuckoo dummy, and egg rejection against cuckoo model eggs. Bulbuls used specific nest sites that were further away from forests than those of finchbills, and they behaved more aggressively toward cuckoos than finchbills. In contrast, bulbuls possessed moderate egg rejection ability, whereas the finchbill rejected 100% of cuckoo model eggs. We suggest that selection of a nest site away from forests by the bulbul explains the absence of parasitism by Himalayan cuckoos. We suggest that these interspecific differences in nest-site selection and nest defense indicate alternative responses to selection due to cuckoos.

Antibacterial and anatomical defenses in an oil contaminated, vulnerable seaduck.

Oil spills have killed thousands of birds during the last 100 years, but nonlethal effects of oil spills on birds remain poorly studied. We measured phenotype characters in 819 eiders Somateria mollissima (279 whole birds and 540 wings) of which 13.6% were oiled. We tested the hypotheses that (a) the morphology of eiders does not change due to oil contamination; (b) the anatomy of organs reflects the physiological reaction to contamination, for example, increase in metabolic demand, increase in food intake, and counteracting toxic effects of oil; (c) large locomotion apparatus that facilitates locomotion increases the risk of getting oiled; and (d) individual eiders with a higher production of secretions from the uropygial grand were more likely to have oil on their plumage. We tested whether 19 characters differed between oiled and nonoiled individuals, showing a consistent pattern. The final model retained seven predictor variables showing relationships between eiders contaminated with oil and food consumption, flight, and diving abilities. We tested whether these effects were due to differences in body condition, liver mass, empty gizzard mass, or other characters that could have been affected by impaired flight and diving ability. There was no evidence of such negative impact of oiling on eiders. We found that significant exposure to oil was associated with increased diversity of antibacterial defense. Oiled eiders did not constitute a random sample, and superior diving ability as reflected by large foot area was at a selective disadvantage during oil spills. Thus, specific characteristics predispose eiders to oiling, with an adaptation to swimming, diving, and flying being traded against the costs of oiling. In contrast, individuals with a high degree of physiological plasticity may experience an advantage because their uropygial secretions counteract the effects of oil contamination.

Not so black, not so white: differences in microorganism load of contiguous feathers from white stork chicks.

Many organisms are characterized by strikingly contrasting black and white coloration, but the function of such contrasts has been inadequately studied. In this article, we tested the function of black and white contrasting plumage in white stork Ciconia ciconia chicks. We found greater abundance and diversity of microorganisms on black compared with adjacent white feathers. In addition, nest size was positively correlated with the abundance and diversity of microorganisms on white feathers. Flight initiation distance (FID), defined as the distance at which adult white storks took flight when approached by a human, was negatively correlated with most measurements of microorganism abundance. Breeding success was generally positively correlated with the abundance and diversity of microorganisms on black feathers. The feather growth rate was positively correlated with some and negatively correlated with other measurements of microbial abundance and diversity. Finally, chick growth was negatively correlated with the number of microbial species on black feathers and positively with the abundance and diversity of microorganisms on white feathers. These findings are consistent not only with the role of microorganisms in the maintenance of a benign microbial environment which differs between black and white feathers, but also with the hypothesis that several taxa of microorganisms found in black and white plumage are virulent, with negative effects on the fitness of their hosts.

Snake-like calls in breeding tits.

Hole-nesting tits belonging to the family Paridae produce a hissing display that resembles the exhalatory hiss of a snake. When a predatory animal enters the nest hole of a tit, tits often hiss vigorously, while lunging their head forward and shaking their wings and tail, until the intruder retreats. We assessed the acoustic similarity between such hiss calls from 6 species of tits, snake hisses, and tit syllables used in alarm vocalizations, as well as white noise as a control. Tit hiss calls showed a high degree of similarity with snake hisses from 3 different snake families. Tit hisses had lower similarity to syllable alarm calls, suggesting convergence of tit hisses in their spectral structure. Hiss calls would only be effective in protecting nest boxes if nest predators responded to these calls. In order to test this hypothesis, we trained individual Swinhoe's striped squirrels, Tamiops swinhoei hainanus, a common predator of egg and nestling tits, to feed at feeders in proximity to nest boxes. We compared the aversive response of squirrels to tit's hiss calls and white noise, presented in random order. Squirrels showed a higher degree of avoidance of feeders when hiss calls were played back than when white noise was presented. In conclusion, our study suggests that hole-nesting birds have evolved convergent snake-like hiss calls, and that predators avoid to prey on the contents of nest boxes from which snake-like hisses emerge.

Face mask-wear did not affect large-scale patterns in escape and alertness of urban and rural birds during the COVID-19 pandemic.

Actions taken against the COVID-19 pandemic have dramatically affected many aspects of human activity, giving us a unique opportunity to study how wildlife responds to the human-induced rapid environmental changes. The wearing of face masks, widely adopted to prevent pathogen transmission, represents a novel element in many parts of the world where wearing a face mask was rare before the COVID-19 outbreak. During September 2020-March 2021, we conducted large-scale multi-species field experiments to evaluate whether face mask-use in public places elicits a behavioural response in birds by comparing their escape and alert responses when approached by a researcher with or without a face mask in four European countries (Czech Republic, Finland, Hungary, and Poland) and Israel. We also tested whether these patterns differed between urban and rural sites. We employed Bayesian generalized linear mixed models (with phylogeny and site as random factors) controlling for a suite of covariates and found no association between the face mask-wear and flight initiation distance, alert distance, and fly-away distance, respectively, neither in urban nor in rural birds. However, we found that all three distances were strongly and consistently associated with habitat type and starting distance, with birds showing earlier escape and alert behaviour and longer distances fled when approached in rural than in urban habitats and from longer initial distances. Our results indicate that wearing face masks did not trigger observable changes in antipredator behaviour across the Western Palearctic birds, and our data did not support the role of habituation in explaining this pattern.

Individual quality and phenology mediate the effect of radioactive contamination on body temperature in Chernobyl barn swallows.

Anthropogenic stressors, such as radioactive contaminants released from the Chernobyl and Fukushima Daiichi accidents, deteriorate ecological and evolutionary processes, as evidence for damaging effects of radioactive contamination on wildlife is accumulating. Yet little is known about physiological traits of animals inhabiting contaminated areas, and how those are affected by individual quality and phenology. We investigated variation in body temperature of wild barn swallows, Hirundo rustica, exposed to radioactive contamination from the Chernobyl accident in Ukraine and Belarus. We tested whether exposure to variable levels of radioactive contamination modified core body temperature of birds, and whether individual and phenological characteristics modulated radiosensitivity of body temperature. We showed that barn swallow body temperature varied with exposure to environmental radioactive contamination and that individual characteristics and phenology affected radioactive exposure. Increased radiosensitivity and up-regulation of body temperature were detected in birds of low body condition, high risk of capture, and in animals captured late during the day but early during the season. These results highlight the complex ways that the body temperature of a wild bird is impacted by exposure to increased radioactive contamination in natural habitats. By impacting body temperature, increased radioactive contamination may compromise energetic balance, jeopardize responsiveness to global warming, and increase risk of overheating.