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1.
Future Med Chem ; 15(15): 1415-1426, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37584209

RESUMO

Background: More studies using cobalt complexes as drugs are needed. Results: The drug action of two cobalt salicylaldimines was determined. The complexes and amphotericin B (20 mg/ml) inhibited Candida albicans at 9-15 and 21 mm. This concentration of both ligands inhibited Staphylococcus aureus at 10 mm and one ligand inhibited Escherichia coli at 9 mm, but the complexes and ampicillin inhibited four bacteria at 9-20 and 21-26 mm. The ligands were inactive against cancer and normal cells, but the complexes and doxorubicin provided IC50 values of 28.18-54.19 and 9.66 µM against MCF-7 cells and 15.76-20.49 and 36.42 µM against BHK cells. Conclusion: The ligands' activity was much improved by complexation, although they remained substandard.

2.
Inorg Chem ; 60(23): 17911-17925, 2021 Dec 06.
Artigo em Inglês | MEDLINE | ID: mdl-34738800

RESUMO

Platinum-based anticancer drugs are actively developed utilizing lipophilic ligands or drug carriers for the efficient penetration of biomembranes, reduction of side effects, and tumor targeting. We report the development of a supramolecular host-guest system built on cationic platinum(II) compounds bearing ligands anchored in the cavity of the macrocyclic host. The host-guest binding and hydrolysis process on the platinum core were investigated in detail by using NMR, MS, X-ray diffraction, and relativistic DFT calculations. The encapsulation process in cucurbit[7]uril unequivocally promotes the stability of hydrolyzed dicationic cis-[PtII(NH3)2(H2O)(NH2-R)]2+ compared to its trans isomer. Biological screening on the ovarian cancer lines A2780 and A2780/CP shows time-dependent toxicity. Notably, the reported complex and its ß-cyclodextrin (ß-CD) assembly achieve the same cellular uptake as cisplatin and cisplatin@ß-CD, respectively, while maintaining a significantly lower toxicity profile.


Assuntos
Antineoplásicos/farmacologia , Teoria da Densidade Funcional , Compostos Macrocíclicos/farmacologia , Compostos Organoplatínicos/farmacologia , Antineoplásicos/síntese química , Antineoplásicos/química , Proliferação de Células/efeitos dos fármacos , Sobrevivência Celular/efeitos dos fármacos , Ensaios de Seleção de Medicamentos Antitumorais , Humanos , Compostos Macrocíclicos/síntese química , Compostos Macrocíclicos/química , Substâncias Macromoleculares/síntese química , Substâncias Macromoleculares/química , Substâncias Macromoleculares/farmacologia , Estrutura Molecular , Compostos Organoplatínicos/síntese química , Compostos Organoplatínicos/química , Células Tumorais Cultivadas
3.
Membranes (Basel) ; 11(2)2021 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-33573305

RESUMO

The article first summarizes case studies on the three basic types of treated water used in power plants and heating stations. Its main focus is Czechia as the representative of Eastern European countries. Water as the working medium in the power industry presents the three most common cycles-the first is make-up water for boilers, the second is cooling water and the third is represented by a specific type of water (e.g., liquid waste mixtures, primary and secondary circuits in nuclear power plants, turbine condensate, etc.). The water treatment technologies can be summarized into four main groups-(1) filtration (coagulation) and dosing chemicals, (2) ion exchange technology, (3) membrane processes and (4) a combination of the last two. The article shows the ideal industry-proven technology for each water cycle. Case studies revealed the economic, technical and environmental advantages/disadvantages of each technology. The percentage of technologies operated in energetics in Eastern Europe is briefly described. Although the work is conceived as an overview of water treatment in real operation, its novelty lies in a technological model of the treatment of turbine condensate, recycling of the cooling tower blowdown plus other liquid waste mixtures, and the rejection of colloidal substances from the secondary circuit in nuclear power plants. This is followed by an evaluation of the potential novel technologies and novel materials.

4.
Membranes (Basel) ; 10(11)2020 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-33212775

RESUMO

Incumbent electromembrane separation processes, including electrodialysis (ED) and electrodeionization (EDI), provide competitive techniques for desalination, selective separation, and unique solutions for ultra-pure water production. However, most of these common electrochemical systems are limited by concentration polarization and the necessity for multistep raw water pre-treatment. Shock electrodialysis (SED) utilizes overlimiting current to produce fresh, deionized water in a single step process by extending ion depleted zones that propagate through a porous medium as a sharp concentration gradient or a shock wave. So far, SED has been demonstrated on small scale laboratory units using cation-exchange membranes. In this work, we present a scalable and multi-stack ready unit with a large, 5000 mm2 membrane active area designed and constructed at the Technical University of Liberec in cooperation with MemBrain s.r.o. and Mega a.s. companies (Czechia). We report more than 99% salt rejection using anion-exchange membranes, depending on a dimensionless parameter that scales the constant applied current by the limiting current. It is shown that these parameters are most probably associated with pore size and porous media chemistry. Further design changes need to be done to the separator, the porous medium, and other functional elements to improve the functionality and energy efficiency.

5.
Bioorg Chem ; 104: 104298, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-33011537

RESUMO

Extensive phytochemical analysis of the CHCl3-soluble part of an ethanolic extract of branches and twigs of Broussonetia papyrifera led to the isolation of fourteen compounds, including a novel 5,11-dioxabenzo[b]fluoren-10-one derivative named broussofluorenone C (12). The isolated compounds 1-14 were characterized based on their NMR and HRMS data, and examined for their anti-inflammatory activities in LPS-stimulated THP-1 cells as well as for their cellular antioxidant effects. Compounds 7-10 and 12 showed inhibitory effects on NF-κB/AP-1 activation and compounds 7-9 were subsequently confirmed to suppress the secretion of both IL-1ß and TNF-α in LPS-stimulated THP-1 cells more significantly than the prednisone used as a positive control. In the CAA assay, compound 10 exhibited the greatest antioxidant effect, greater than that of the quercetin used as a positive control. The results show possible beneficial effects and utilization of B. papyrifera wood in the treatment of inflammatory diseases as well as oxidative stress.


Assuntos
Anti-Inflamatórios/farmacologia , Antioxidantes/farmacologia , Broussonetia/química , Anti-Inflamatórios/química , Anti-Inflamatórios/isolamento & purificação , Antioxidantes/química , Antioxidantes/isolamento & purificação , Sobrevivência Celular/efeitos dos fármacos , Células Cultivadas , Relação Dose-Resposta a Droga , Humanos , Interleucina-1beta/antagonistas & inibidores , Interleucina-1beta/biossíntese , Lipopolissacarídeos/antagonistas & inibidores , Lipopolissacarídeos/farmacologia , Estrutura Molecular , NF-kappa B/análise , NF-kappa B/antagonistas & inibidores , NF-kappa B/biossíntese , Estresse Oxidativo/efeitos dos fármacos , Relação Estrutura-Atividade , Células THP-1 , Fator de Transcrição AP-1/análise , Fator de Transcrição AP-1/antagonistas & inibidores , Fator de Transcrição AP-1/biossíntese , Fator de Necrose Tumoral alfa/antagonistas & inibidores , Fator de Necrose Tumoral alfa/biossíntese
6.
Int J Biol Macromol ; 155: 330-339, 2020 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-32229207

RESUMO

Double stimuli-responsive functionalized cellulose nanocrystal-poly[2-(dimethylamino)ethyl methacrylate] (CNC-g-PDMAEMA) reinforced poly(3-hydroxybutyrate-co-3-hydroxy valerate) (PHBV) electrospun composite membranes were explored as drug delivery vehicles using tetracycline hydrochloride (TH) as a model drug. It was found that rigid CNC-g-PDMAEMA nanoparticles enhanced thermal, crystallization and hydrophilic properties of PHBV. Moreover, great improvements in fiber diameter uniformity, crystallization ability and maximum decomposition temperature (Tmax) could be achieved at 6 wt% CNC-g-PDMAEMA. Furthermore, by introducing stimuli-responsive CNC-g-PDMAEMA nanofillers, intelligent and long-term sustained release behavior of composite membranes could be achieved. The releasing mechanism of composite membranes based on zero order, first order, Higuchi and Korsmeyere-Peppas mathematical models was clearly demonstrated, giving effective technical guidance for practical drug delivery systems.


Assuntos
Celulose/química , Liberação Controlada de Fármacos , Metacrilatos/química , Nanocompostos/química , Nanopartículas/química , Nylons/química , Cristalização , Interações Hidrofóbicas e Hidrofílicas , Membranas/química , Modelos Teóricos , Temperatura
7.
Int J Biol Macromol ; 132: 51-62, 2019 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-30922915

RESUMO

Zinc oxide/cellulose nanocrystal (ZnO/CNC) hybrids with modulated morphologies were prepared by using bamboo CNC as templates via green one-step technique. The effect of pH values on the morphology, microstructure, thermal stability, antibacterial efficiency and dye absorption kinetics of hybrids were investigated. A possible mechanism for various hybrid morphologies at different pH values was provided. All the samples exhibited high antibacterial ratios of 91.4%-99.8% against both Escherichia coli and Staphylococcus aureus. ZnO/CNC8.5 gave quick removal efficiency with high dye removal ratios in methylene blue (MB, 93.55%) and malachite green (MG, 99.02%), especially >91.47% and 97.85% within 5 min. The absorption capacity could reach up to 46.77 mg/g for MB and 49.51 mg/g for MG. Besides, absorption kinetics showed that the absorption behavior followed the pseudo-second-order kinetic model (R2 > 0.99996). Such ZnO/CNC hybrids show outstanding and low-cost adsorbent for efficient absorption of cationic dyes in wastewater treatment field.


Assuntos
Absorção Fisico-Química , Antibacterianos/química , Celulose/química , Corantes/química , Corantes/isolamento & purificação , Nanopartículas/química , Óxido de Zinco/química , Antibacterianos/farmacologia , Técnicas de Química Sintética , Escherichia coli/efeitos dos fármacos , Química Verde , Concentração de Íons de Hidrogênio , Cinética , Azul de Metileno/química , Azul de Metileno/isolamento & purificação , Corantes de Rosanilina/química , Corantes de Rosanilina/isolamento & purificação , Staphylococcus aureus/efeitos dos fármacos , Temperatura , Águas Residuárias/química , Purificação da Água , Óxido de Zinco/farmacologia
8.
RSC Adv ; 9(38): 21844-21851, 2019 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-35518892

RESUMO

It is of great significance to develop phase change materials (PCMs) with high performance. The reported PCMs usually possess serious defects like low heat capacity and poor thermal stability. Here, core-sheath structured nanofibers with polyvinyl butyral (PVB) as the sheath and octadecane as the core were fabricated by melt coaxial electrospinning. Pure octadecane without any solvents was used as the core solution, thus, the optimal sample possessed very high latent heat up to 118 J g-1. We studied the influence of core feed rate and PVB solution concentration on the encapsulation rate, and the highest encapsulation rate was found when the PVB concentration was 10% and core feed rate was 0.08 mL h-1. And hexagonal cesium tungsten bronze (Cs x WO3, a near infrared absorber) was introduced into the optimal sample partly to improve its conversion efficiency of solar to thermal energy, and partly absorb uncomfortable infrared light; the composite phase change material also possessed high latent heat up to 96.9 J g-1. In addition, 100 thermal cycle test proved that with a minor latent heat decrease, the prepared core-sheath structured smart nanofibers had good thermal stability, which overcomes the leakage problem of pure octadecane. Additionally, the 9 wt% Cs x WO3-loaded sample had an increase in tensile strength and elongation compared with the sample without Cs x WO3, indicating the good compatibility between Cs x WO3 and PVB.

9.
J Biol Chem ; 292(42): 17525-17540, 2017 10 20.
Artigo em Inglês | MEDLINE | ID: mdl-28860196

RESUMO

Multistep phosphorelay (MSP) cascades mediate responses to a wide spectrum of stimuli, including plant hormonal signaling, but several aspects of MSP await elucidation. Here, we provide first insight into the key step of MSP-mediated phosphotransfer in a eukaryotic system, the phosphorylation of the receiver domain of the histidine kinase CYTOKININ-INDEPENDENT 1 (CKI1RD) from Arabidopsis thaliana We observed that the crystal structures of free, Mg2+-bound, and beryllofluoridated CKI1RD (a stable analogue of the labile phosphorylated form) were identical and similar to the active state of receiver domains of bacterial response regulators. However, the three CKI1RD variants exhibited different conformational dynamics in solution. NMR studies revealed that Mg2+ binding and beryllofluoridation alter the conformational equilibrium of the ß3-α3 loop close to the phosphorylation site. Mutations that perturbed the conformational behavior of the ß3-α3 loop while keeping the active-site aspartate intact resulted in suppression of CKI1 function. Mechanistically, homology modeling indicated that the ß3-α3 loop directly interacts with the ATP-binding site of the CKI1 histidine kinase domain. The functional relevance of the conformational dynamics observed in the ß3-α3 loop of CKI1RD was supported by a comparison with another A. thaliana histidine kinase, ETR1. In contrast to the highly dynamic ß3-α3 loop of CKI1RD, the corresponding loop of the ETR1 receiver domain (ETR1RD) exhibited little conformational exchange and adopted a different orientation in crystals. Biochemical data indicated that ETR1RD is involved in phosphorylation-independent signaling, implying a direct link between conformational behavior and the ability of eukaryotic receiver domains to participate in MSP.


Assuntos
Proteínas de Arabidopsis/química , Arabidopsis/enzimologia , Proteínas Quinases/química , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Cristalografia por Raios X , Ressonância Magnética Nuclear Biomolecular , Domínios Proteicos , Proteínas Quinases/genética , Estrutura Secundária de Proteína , Receptores de Superfície Celular/química , Receptores de Superfície Celular/genética
10.
Microbiol Res ; 188-189: 9-22, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27296958

RESUMO

The Pden_2689 gene encoding FerA, an NADH:flavin oxidoreductase required for growth of Paracoccus denitrificans under iron limitation, was cloned and overexpressed as a C-terminally His6-tagged derivative. The binding of substrates and products was detected and quantified by isothermal titration calorimetry and fluorometric titration. FerA binds FMN and FAD with comparable affinity in an enthalpically driven, entropically opposed process. The reduced flavin is bound more loosely than the oxidized one, which was confirmed by a negative shift in the redox potential of FMN after addition of FerA. Initial velocity and substrate analogs inhibition studies showed that FerA follows a random-ordered sequence of substrate (NADH and FMN) binding. The primary kinetic isotope effects from stereospecifically deuterated nicotinamide nucleotides demonstrated that hydride transfer occurs from the pro-S position and contributes to rate limitation for the overall reaction. The crystal structure of FerA revealed a twisted seven-stranded antiparallel ß-barrel similar to that of other short chain flavin reductases. Only minor structural changes around Arg106 took place upon FMN binding. The solution structure FerA derived from small angle X-ray scattering (SAXS) matched the dimer assembly predicted from the crystal structure. Site-directed mutagenesis pinpointed a role of Arg106 and His146 in binding of flavin and NADH, respectively. Pull down experiments performed with cytoplasmic extracts resulted in a negative outcome indicating that FerA might physiologically act without association with other proteins. Rapid kinetics experiments provided evidence for a stabilizing effect of another P. denitrificans protein, the NAD(P)H: acceptor oxidoreducase FerB, against spontaneous oxidation of the FerA-produced dihydroflavin.


Assuntos
FMN Redutase/química , FMN Redutase/metabolismo , Paracoccus denitrificans/enzimologia , Cromatografia de Afinidade , Clonagem Molecular , Cristalografia por Raios X , FMN Redutase/genética , Mononucleotídeo de Flavina/metabolismo , Flavina-Adenina Dinucleotídeo/metabolismo , Expressão Gênica , Cinética , Modelos Moleculares , NAD/metabolismo , Paracoccus denitrificans/genética , Ligação Proteica , Conformação Proteica , Multimerização Proteica , Espalhamento a Baixo Ângulo
11.
Chemphyschem ; 15(11): 2230-5, 2014 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-24819561

RESUMO

An easy-to-prepare chemosensor, (E)-1-(phthalazine-4-yl)-2-(1-(pyridine-2-yl)ethylidene) hydrazine (3), structurally characterized by single X-ray crystallography, is developed for the selective and sensitive detection of Co(2+) in aqueous media. Chemosensor 3 shows both absorption and fluorescence responses to Co(2+) by forming a 1:1 complex (among the surveyed metal ions) with a detection limit down to 50 nM. It can also be used as a 'naked-eye' sensor due to the outstanding visible and emission color changes from yellow to red and blue to orange, respectively.


Assuntos
Cobalto/química , Íons/química , Metais/química , Água/química , Cristalografia por Raios X/métodos , Corantes Fluorescentes/química , Limite de Detecção , Sensibilidade e Especificidade
12.
PLoS One ; 9(5): e96262, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24817153

RESUMO

FerB from Paracoccus denitrificans is a soluble cytoplasmic flavoprotein that accepts redox equivalents from NADH or NADPH and transfers them to various acceptors such as quinones, ferric complexes and chromate. The crystal structure and small-angle X-ray scattering measurements in solution reported here reveal a head-to-tail dimer with two flavin mononucleotide groups bound at the opposite sides of the subunit interface. The dimers tend to self-associate to a tetrameric form at higher protein concentrations. Amino acid residues important for the binding of FMN and NADH and for the catalytic activity are identified and verified by site-directed mutagenesis. In particular, we show that Glu77 anchors a conserved water molecule in close proximity to the O2 of FMN, with the probable role of facilitating flavin reduction. Hydride transfer is shown to occur from the 4-pro-S position of NADH to the solvent-accessible si side of the flavin ring. When using deuterated NADH, this process exhibits a kinetic isotope effect of about 6 just as does the NADH-dependent quinone reductase activity of FerB; the first, reductive half-reaction of flavin cofactor is thus rate-limiting. Replacing the bulky Arg95 in the vicinity of the active site with alanine substantially enhances the activity towards external flavins that obeys the standard bi-bi ping-pong reaction mechanism. The new evidence for a cryptic flavin reductase activity of FerB justifies the previous inclusion of this enzyme in the protein family of NADPH-dependent FMN reductases.


Assuntos
Proteínas de Bactérias/química , NADH NADPH Oxirredutases/química , Paracoccus denitrificans/enzimologia , Estrutura Terciária de Proteína , Sequência de Aminoácidos , Aminoácidos/química , Aminoácidos/genética , Aminoácidos/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação/genética , Biocatálise , Domínio Catalítico/genética , Cristalografia por Raios X , Mononucleotídeo de Flavina/química , Mononucleotídeo de Flavina/metabolismo , Flavinas/química , Flavinas/metabolismo , Flavoproteínas/química , Flavoproteínas/genética , Flavoproteínas/metabolismo , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , NADH NADPH Oxirredutases/classificação , NADH NADPH Oxirredutases/metabolismo , NADP/química , NADP/metabolismo , Oxirredução , Paracoccus denitrificans/genética , Ligação Proteica , Multimerização Proteica , Espalhamento a Baixo Ângulo , Homologia de Sequência de Aminoácidos , Difração de Raios X
13.
Analyst ; 137(17): 3975-81, 2012 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-22785321

RESUMO

An efficient water soluble fluorescent Al(3+) receptor, 1-[[(2-furanylmethyl)imino]methyl]-2-naphthol (1-H) was synthesized and characterized by physico-chemical and spectroscopic tools along with single crystal X-ray crystallography. High selectivity and affinity of 1-H towards Al(3+) in HEPES buffer (DMSO/water: 1/100) of pH 7.4 at 25 °C showed it to be suitable for detection of intracellular Al(3+) by fluorescence microscopy. Metal ions, viz. alkali (Na(+), K(+)), alkaline earth (Mg(2+), Ca(2+)), and transition-metal ions (Ni(2+), Zn(2+), Cd(2+), Co(2+), Cu(2+), Fe(3+), Cr(3+/6+), Hg(2+)) and Pb(2+), Ag(+) did not interfere. The lowest detection limit for Al(3+) was calculated to be 6.03 × 10(-7) M in 100 mM HEPES buffer (DMSO/water: 1/100). Theoretical calculations have also been included in support of the configuration of the probe-aluminium complex.


Assuntos
Alumínio/análise , Colorimetria , Corantes Fluorescentes/química , Microscopia de Fluorescência , Água/química , Complexos de Coordenação/química , Cristalografia por Raios X , Corantes Fluorescentes/síntese química , Células HeLa , Humanos , Concentração de Íons de Hidrogênio , Íons/química , Metais/química , Conformação Molecular , Naftóis/síntese química , Naftóis/química
14.
Phys Chem Chem Phys ; 13(35): 15854-64, 2011 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-21814700

RESUMO

A range of purine derivatives modified at position 6 of the basic purine skeleton exhibit a variety of biological activities. Several derivatives are used or tested nowadays for pharmacological treatments. The present work aims to analyze the effects of substituents on the electron distribution in the purine core as reflected by NMR chemical shifts. We collected a comprehensive set of experimental NMR data for a variety of 6-substituted purines (-NH(2), -NHMe, -NMe(2), -OMe, -Me, -CCH, and -CN) and determined the molecular and crystal structures of three derivatives (-NHMe, -CCH, and -CN) by X-ray diffraction. The density-functional methods calibrated in our recent study (Phys. Chem. Chem. Phys., 2010, 12, 5126) have been employed to enable understanding of the substituent-induced changes in the NMR chemical shifts of the atoms in the purine skeleton. Analyses of the nuclear shielding using localized molecular orbitals (LMOs), specifically the natural LMOs (NLMOs) and Pipek-Mezey LMOs, were used to break down the values of the isotropic (13)C and (15)N NMR chemical shifts and the chemical shift tensors into the contributions of the individual LMOs. The experimental and calculated trends in the chemical shift of the N-3 atom correlate nicely with the Hammett constants (σ(para)) and the calculated natural charges on N-3, whereas the contributions of the LMOs to the N-1 and C-6 chemical shifts are found to be more complex.


Assuntos
Espectroscopia de Ressonância Magnética/métodos , Purinas/química , Isótopos de Carbono/análise , Modelos Moleculares , Difração de Raios X
15.
Phys Chem Chem Phys ; 13(35): 15845-53, 2011 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-21818495

RESUMO

A combination of a single crystal X-ray diffraction study and density functional theory calculations has been applied to a bidentate Schiff base compound to elucidate different cooperative non-covalent interactions involved in the stabilization of the keto form over the enol one in the solid state. The single crystal X-ray structure reveals a remarkable supramolecular assembly of the keto form through a cyclic hydrogen bonded dimeric motif. The most interesting feature in the supramolecular assembly is the formation of a 'dimer of dimer' motif by π···π, CH···π and N···O/O···O interactions in which the π···π interaction involving the aromatic phenyl ring and the intramolecularly hydrogen bonded pseudo-aromatic ring of the keto form lying just above or below the phenyl ring of the other dimer seems to be unprecedented. The optimized geometry of the hydrogen bonded dimeric motif of the keto form of the organic molecule has been obtained by DFT calculations and agrees very well with that found within the crystalline state. The X-ray crystallographic geometry of the 'dimer of dimer' has also been computed, which shows that in the HOMO, the π electrons are localized in the phenyl rings away from each other, while in the LUMO, there is a strong π-π interaction between the phenyl ring of one dimer with the pseudo-aromatic ring of another dimer with an energy estimated to be 7.95 kJ mol(-1). Therefore, on HOMO → LUMO excitation there is localization of π electrons in the central part of the complex moiety which plays a stabilizing role of the dimer of dimer motif in the solid state.


Assuntos
Hidrocarbonetos Aromáticos/química , Bases de Schiff/química , Cristalografia por Raios X , Ligação de Hidrogênio , Ligantes , Modelos Moleculares , Teoria Quântica
16.
Org Biomol Chem ; 9(16): 5703-13, 2011 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-21706098

RESUMO

N6-Isopentenyladenine (L1) was subjected to variously acidic media in 0.1 M, 1 M and 2 M HCl. In dependence on the acidity of the medium, the formation of three main acid hydrolysis products, involving the N6-isopentenyladeninium (HL1) (1), 7,8,9,10-tetrahydro-7,7-dimethyl-3H-pyrimido[2,1-i]purin-6-ium (HL2) (2) or 5-amino-4-(4,4-dimethyl-3,4,5,6-tetrahydropyrimidin-2-yl)-imidazolium (H(2)L3) (3-5) cations, were determined and characterized by multinuclear solution-state NMR spectroscopy and in the solid state by single crystal X-ray analysis. The coordination abilities of these transformation products have been also investigated. The compounds of the compositions [Zn(HL1)Cl(3)]·H(2)O (1), [Zn(3)(HL2)(2)Cl(8)] (2), (H(2)L3)[CuCl(4)] (4) and (H(2)L3)[ZnCl(4)] (5) have been prepared in dependence on the acidity of the medium used by the reactions of L1 with ZnCl(2)·1.5H(2)O or CuCl(2)·2H(2)O. Based on the NMR spectroscopic and X-ray crystallographic results, the mechanism of transformation of L1 in the acidic medium, involving the protonation, cyclization and ring fission, has been suggested.


Assuntos
Citocininas/química , Isopenteniladenosina/química , Ácidos/química , Cristalografia por Raios X , Hidrólise , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Água/química
17.
Plant J ; 67(5): 827-39, 2011 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-21569135

RESUMO

Multistep phosphorelay (MSP) signaling mediates responses to a variety of important stimuli in plants. In Arabidopsis MSP, the signal is transferred from sensor histidine kinase (HK) via histidine phosphotransfer proteins (AHP1-AHP5) to nuclear response regulators. In contrast to ancestral two-component signaling in bacteria, protein interactions in plant MSP are supposed to be rather nonspecific. Here, we show that the C-terminal receiver domain of HK CKI1 (CKI1(RD) ) is responsible for the recognition of CKI1 downstream signaling partners, and specifically interacts with AHP2, AHP3 and AHP5 with different affinities. We studied the effects of Mg²âº, the co-factor necessary for signal transduction via MSP, and phosphorylation-mimicking BeF3⁻ on CKI1(RD) in solution, and determined the crystal structure of free CKI1(RD) and CKI1(RD) in a complex with Mg²âº. We found that the structure of CKI1(RD) shares similarities with the only known structure of plant HK, ETR1(RD) , with the main differences being in loop L3. Magnesium binding induces the rearrangement of some residues around the active site of CKI1(RD) , as was determined by both X-ray crystallography and NMR spectroscopy. Collectively, these results provide initial insights into the nature of molecular mechanisms determining the specificity of MSP signaling and MSP catalysis in plants.


Assuntos
Proteínas de Arabidopsis/química , Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimologia , Fosfotransferases/metabolismo , Proteínas Quinases/química , Proteínas Quinases/metabolismo , Arabidopsis/genética , Arabidopsis/fisiologia , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/isolamento & purificação , Cristalografia por Raios X , Histidina/metabolismo , Modelos Moleculares , Mutação , Fosforilação , Fosfotransferases/genética , Mapeamento de Interação de Proteínas , Proteínas Quinases/genética , Proteínas Quinases/isolamento & purificação , Estrutura Terciária de Proteína , Proteínas Recombinantes de Fusão , Sensibilidade e Especificidade , Transdução de Sinais/fisiologia
18.
PLoS One ; 6(2): e17270, 2011 Feb 25.
Artigo em Inglês | MEDLINE | ID: mdl-21364888

RESUMO

BACKGROUND: The SMC5-6 protein complex is involved in the cellular response to DNA damage. It is composed of 6-8 polypeptides, of which Nse1, Nse3 and Nse4 form a tight sub-complex. MAGEG1, the mammalian ortholog of Nse3, is the founding member of the MAGE (melanoma-associated antigen) protein family and Nse4 is related to the EID (E1A-like inhibitor of differentiation) family of transcriptional repressors. METHODOLOGY/PRINCIPAL FINDINGS: Using site-directed mutagenesis, protein-protein interaction analyses and molecular modelling, we have identified a conserved hydrophobic surface on the C-terminal domain of Nse3 that interacts with Nse4 and identified residues in its N-terminal domain that are essential for interaction with Nse1. We show that these interactions are conserved in the human orthologs. Furthermore, interaction of MAGEG1, the mammalian ortholog of Nse3, with NSE4b, one of the mammalian orthologs of Nse4, results in transcriptional co-activation of the nuclear receptor, steroidogenic factor 1 (SF1). In an examination of the evolutionary conservation of the Nse3-Nse4 interactions, we find that several MAGE proteins can interact with at least one of the NSE4/EID proteins. CONCLUSIONS/SIGNIFICANCE: We have found that, despite the evolutionary diversification of the MAGE family, the characteristic hydrophobic surface shared by all MAGE proteins from yeast to humans mediates its binding to NSE4/EID proteins. Our work provides new insights into the interactions, evolution and functions of the enigmatic MAGE proteins.


Assuntos
Proteínas de Transporte/metabolismo , Evolução Molecular , Antígenos Específicos de Melanoma/metabolismo , Proteínas Nucleares/metabolismo , Mapeamento de Interação de Proteínas , Proteínas Repressoras/metabolismo , Proteínas de Schizosaccharomyces pombe/metabolismo , Sequência de Aminoácidos , Proteínas de Transporte/química , Proteínas de Transporte/genética , Proteínas de Ciclo Celular/química , Proteínas de Ciclo Celular/genética , Proteínas de Ciclo Celular/metabolismo , Proteínas Cromossômicas não Histona/química , Proteínas Cromossômicas não Histona/genética , Proteínas Cromossômicas não Histona/metabolismo , Sequência Conservada/fisiologia , Humanos , Antígenos Específicos de Melanoma/química , Antígenos Específicos de Melanoma/genética , Modelos Biológicos , Modelos Moleculares , Dados de Sequência Molecular , Família Multigênica , Complexos Multiproteicos/química , Complexos Multiproteicos/genética , Complexos Multiproteicos/metabolismo , Proteínas Nucleares/química , Proteínas Nucleares/genética , Ligação Proteica/genética , Proteínas Repressoras/química , Proteínas Repressoras/genética , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/química , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Schizosaccharomyces/genética , Schizosaccharomyces/metabolismo , Proteínas de Schizosaccharomyces pombe/química , Proteínas de Schizosaccharomyces pombe/genética , Homologia de Sequência
19.
Dalton Trans ; 39(48): 11551-9, 2010 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-21042613

RESUMO

Two novel organic-inorganic hybrid tungsto- and molybdo-telurates having formula [{Na(4)(H(2)O)(14)}{Cu(gly)}(2)][TeMo(6)O(24)] (1){gly = glycine} and [{Cu(en)(2)}(3){TeW(6)O(24)}]·6H(2)O {en = ethyline-diamine} (2) based on Anderson type heteropolyoxometalates (POMs) have been synthesized and characterized by X-ray crystallography. Common structural feature of both 1 and 2 is the presence of a unique 1D open rack-like architecture, where the disc shaped Anderson POMs act as steps and cationic Cu-organic complexes act as handles of the rack. In 1 the independent structural unit is a 1D coordination polymer with the above mentioned rack type architecture, while in 2, these independent rack-like architectures are further extended to a 2D coordination polymer. Heterogeneous catalysis for the epoxidation of cyclohexene and styrene by complexes 1 and 2 showed very good catalytic efficiency resulting epoxides of ~60% yield, with dialcohol formed by the hydrolysis of epoxides, as the other major product (~28%). Cyclic voltammetric studies of [{Na(4)(H(2)O)(14)}{Cu(gly)}(2)][TeMo(6)O(24)] (1) in aqueous KCl solution indicates that the redox changes occur only on the copper centers and supported by carrying out parallel experiments on the precursors like ([Cu(gly)(2)](2+) and [TeMo(6)O(24)](6-), under the identical experimental conditions. The E(1/2) = 0.662, -0.142 and -0.332 V(vs. SCE) correspond to Cu(III) → Cu(II), Cu(II) → Cu(I) and Cu(I) → Cu(0) reductions, respectively. Thermal analyses reveal identical phase transition reactions with an exothermic peak in the DTA curve at 380 °C for 1 and an endothermic peak appears at comparatively higher temperature (408 °C) for 2 manifesting the higher stability of tungstane based POM over the molybdenum ones. EPR as well as magnetic moment results indicate that both the complexes 1 and 2 are paramagnetic with one unpaired electron per copper(II) ion.


Assuntos
Alcenos/química , Complexos de Coordenação/síntese química , Cobre/química , Molibdênio/química , Compostos Organometálicos/química , Polímeros/química , Telúrio/química , Catálise , Complexos de Coordenação/química , Cristalografia por Raios X , Espectroscopia de Ressonância de Spin Eletrônica , Conformação Molecular , Oxirredução
20.
J Phys Chem A ; 114(24): 6689-700, 2010 Jun 24.
Artigo em Inglês | MEDLINE | ID: mdl-20518482

RESUMO

Adenine, an essential building block of nucleic acids present in all living systems, can occur in several tautomeric forms. The phenomenon of tautomerism can be investigated by several experimental methods, including nuclear magnetic resonance. In this study, long-range (1)H-(13)C and (1)H-(15)N coupling constants for N-alkyl derivatives related to four tautomers of adenine are investigated in DMSO and DMF solutions. To investigate the structural dependence of the coupling constants and to understand how polarization propagates in the system, Fermi contact (FC) terms were calculated for the individual isomers and analyzed by using density functional theory (DFT), and the coupling pathways were visualized using real-space functions. The coupling electron deformation densities (CDD) of several (1)H-X (X = (13)C, (15)N) pairs are evaluated and compared. In order to analyze the CDD in more detail, a new approach to break down the CDD into contributions from Boys or Pipek-Mezey localized molecular orbitals (LMOs) has been developed. A similar approach has been applied to split the value of the FC contribution to the J coupling into the LMO contributions. On the basis of chemical concepts, the contributions of sigma-bonds, pi-electrons, and lone pairs of electrons are discussed. The lone pair of electrons at the nitrogen atom contributes significantly to the (1)H-C horizontal line(15)N coupling, whereas the (1)H-C=N-(13)C coupling is affected in a somewhat different way. Surprisingly, the contribution of the intervening C horizontal lineN bond to the FC term for (1)H-C=(15)N coupling originates exclusively in sigma-electrons, with a vanishingly small contribution calculated for the pi-electrons of this fragment. This behavior is rationalized by introducing the concept of "hard and soft J elements" derived from the polarizability of the individual components.


Assuntos
Adenina/química , Isomerismo , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Estrutura Molecular , Difração de Raios X
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