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1.
Mol Ecol Resour ; 20(2): 457-467, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31815343

RESUMO

Although environmental DNA shed from an organism is now widely used for species detection in a wide variety of contexts, mobilizing environmental DNA for management requires estimation of population size and trends in addition to assessing presence or absence. However, the efficacy of environmental-DNA-based indices of abundance for long-term population monitoring have not yet been assessed. Here we report on the relationship between six years of mark-recapture population estimates for eulachon (Thaleichthys pacificus) and "eDNA rates" which are calculated from the product of stream flow and DNA concentration. Eulachon are a culturally and biologically important anadromous fish that have significantly declined in the southern part of their range but were historically rendered into oil and traded. Both the peak eDNA rate and the area under the curve of the daily eDNA rate were highly predictive of the mark-recapture population estimate, explaining 84.96% and 92.53% of the deviance, respectively. Even in the absence of flow correction, the peak of the daily eDNA concentration explained an astonishing 89.53% while the area under the curve explained 90.74% of the deviance. These results support the use of eDNA to monitor eulachon population trends and represent a >80% cost savings over mark-recapture, which could be further increased with automated water sampling, reduced replication, and focused temporal sampling. Due to its logistical ease and affordability, eDNA sampling can facilitate monitoring a larger number of rivers and in remote locations where mark-recapture is infeasible.


Assuntos
DNA Ambiental/genética , Genômica/métodos , Osmeriformes/genética , Animais , Feminino , Genômica/economia , Masculino , Osmeriformes/classificação , Densidade Demográfica , Rios/química
2.
PLoS One ; 11(11): e0165259, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27828988

RESUMO

Noninvasive genetic sampling is an important tool in wildlife ecology and management, typically relying on hair snaring or scat sampling techniques, but hair snaring is labor and cost intensive, and scats yield relatively low quality DNA. New approaches utilizing environmental DNA (eDNA) may provide supplementary, cost-effective tools for noninvasive genetic sampling. We tested whether eDNA from residual saliva on partially-consumed Pacific salmon (Oncorhynchus spp.) carcasses might yield suitable DNA quality for noninvasive monitoring of brown bears (Ursus arctos). We compared the efficiency of monitoring brown bear populations using both fecal DNA and salivary eDNA collected from partially-consumed salmon carcasses in Southeast Alaska. We swabbed a range of tissue types from 156 partially-consumed salmon carcasses from a midseason run of lakeshore-spawning sockeye (O. nerka) and a late season run of stream-spawning chum (O. keta) salmon in 2014. We also swabbed a total of 272 scats from the same locations. Saliva swabs collected from the braincases of salmon had the best amplification rate, followed by swabs taken from individual bite holes. Saliva collected from salmon carcasses identified unique individuals more quickly and required much less labor to locate than scat samples. Salmon carcass swabbing is a promising method to aid in efficient and affordable monitoring of bear populations, and suggests that the swabbing of food remains or consumed baits from other animals may be an additional cost-effective and valuable tool in the study of the ecology and population biology of many elusive and/or wide-ranging species.


Assuntos
DNA/análise , Meio Ambiente , Oncorhynchus/metabolismo , Comportamento Predatório/fisiologia , Saliva/química , Ursidae/fisiologia , Alaska , Animais , DNA/genética , DNA/isolamento & purificação , Feminino , Genótipo , Geografia , Masculino , Oncorhynchus/classificação , Reação em Cadeia da Polimerase , Estações do Ano , Análise de Sequência de DNA/métodos , Especificidade da Espécie , Manejo de Espécimes/economia , Manejo de Espécimes/instrumentação , Manejo de Espécimes/métodos
3.
Evolution ; 66(12): 3765-77, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23206135

RESUMO

Worker policing (mutual repression of reproduction) in the eusocial Hymenoptera represents a leading example of how coercion can facilitate cooperation. The occurrence of worker policing in "primitively" eusocial species with low mating frequencies, which lack relatedness differences conducive to policing, suggests that separate factors may underlie the origin and maintenance of worker policing. We tested this hypothesis by investigating conflict over male parentage in the primitively eusocial, monandrous bumblebee, Bombus terrestris. Using observations, experiments, and microsatellite genotyping, we found that: (a) worker- but not queen-laid male eggs are nearly all eaten (by queens, reproductive, and nonreproductive workers) soon after being laid, so accounting for low observed frequencies of larval and adult worker-produced males; (b) queen- and worker-laid male eggs have equal viabilities; (c) workers discriminate between queen- and worker-laid eggs using cues on eggs and egg cells that almost certainly originate from queens. The cooccurrence in B. terrestris of these three key elements of "classical" worker policing as found in the highly eusocial, polyandrous honeybees provides novel support for the hypothesis that worker policing can originate in the absence of relatedness differences maintaining it. Worker policing in B. terrestris almost certainly arose via reproductive competition among workers, that is, as "selfish" policing.


Assuntos
Abelhas/fisiologia , Comportamento Animal , Oviparidade , Reprodução , Razão de Masculinidade , Animais , Abelhas/genética , Sinais (Psicologia) , Feminino , Larva , Masculino , Repetições de Microssatélites , Óvulo/química , Óvulo/fisiologia
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