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1.
Extremophiles ; 21(6): 1111-1117, 2017 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28894938

RESUMO

We constructed a new Thermus thermophilus cloning vector which enables the colour selection of cloned DNA inserts in the T. thermophilus HB27 host strain (ß-gal-) on growth plates containing 3,4-cyclohexenoesculetin ß-D-galactopyranoside (S-gal) in the medium. This vector harbors a modified ß-galactosidase gene (TTP0042 of T. thermophilus HB27) with 12 unique restriction enzyme sites (Acc65I, AvrII, BlpI, BssHII, EcoRI, EcoRV, HindIII, NruI, SalI, SpeI, SphI and XbaI) as multiple cloning sites under the control of the T. thermophilus slpA promoter. This host-vector system facilitates cloning procedures in T. thermophilus HB27.


Assuntos
Proteínas de Bactérias/genética , Clonagem Molecular/métodos , Thermus thermophilus/genética , beta-Galactosidase/genética , Proteínas de Bactérias/metabolismo , Vetores Genéticos/genética , Thermus thermophilus/enzimologia , beta-Galactosidase/metabolismo
2.
Arch Biochem Biophys ; 587: 31-7, 2015 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-26475675

RESUMO

Tumor necrosis factor-α (TNFα)-induced reactions are effective to maintain homeostasis; however, excessive responses play progressive roles in the pathogenesis of various chronic inflammatory diseases. We demonstrate that TNFα triggered the release of its receptor TNFR1 as a content of extracellular vesicles (EVs) from the human bronchial epithelial cell, BEAS-2b. The TNFR1 cytoplasmic domain binding partner, TNFR-associated death domain (TRADD), was released by TNFα treatment along with TNFR1. TNFα-triggered release of EVs was decreased in the presence of amitriptyline, an inhibitor of acid sphingomyelinase (A-SMase), or of GW4869, an inhibitor of neutral sphingomyelinase (N-SMase), indicating that EVs containing TNFR1 and TRADD are released through A-SMase and N-SMase dependent manners. From sucrose density gradient analysis, each sphingomyelinase is involved in the generation of distinct populations of EVs. Inhibition of A-SMase or N-SMase resulted in significantly increased responses to TNFα in parental cells. Given that TRADD serves as a platform for the assembly of subsequent signaling molecules, the TNFα triggered release of TNFR1 and TRADD might be an effective strategy for down regulation of the TNFα responses of parental cells.


Assuntos
Vesículas Extracelulares/metabolismo , Receptores Tipo I de Fatores de Necrose Tumoral/metabolismo , Mucosa Respiratória/citologia , Proteína de Domínio de Morte Associada a Receptor de TNF/metabolismo , Fator de Necrose Tumoral alfa/metabolismo , Brônquios/citologia , Brônquios/metabolismo , Linhagem Celular , Humanos , Mucosa Respiratória/metabolismo , Esfingomielina Fosfodiesterase/metabolismo
3.
Extremophiles ; 19(6): 1193-201, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26400491

RESUMO

We developed a reporter gene system that enables precise analysis of promoter activity in Thermus thermophilus HB27. The reporter vector employs a promoterless ß-galactosidase gene of Thermus spp. strain T2. However, T. thermophilus HB27 strain has three genes (TTP0042, TTP0220 and TTP0222) whose products have ß-galactosidase activity, which would interfere with correct measurements of promoter activities. Thus, to eliminate this background activity, we disrupted all three of these genes to generate a host strain for measuring promoter expression as ß-galactosidase activity. In addition, T. thermophilus strains also produce carotenoids called thermoxanthins that are yellow pigments. To avoid the influence of these carotenoids on the ß-galactosidase assay, we also disrupted the phytoene synthase gene (crtB). The reporter gene system developed here is a powerful tool for studying transcriptional activity and the mechanisms that regulate gene expression in T. thermophilus HB27. We also showed that the crtB gene cassette could be used in repeated gene-disruption experiments to screen transformants by colony colour, thus eliminating the need for antibiotic resistance markers.


Assuntos
Genes Reporter , Técnicas Genéticas , Regiões Promotoras Genéticas , Thermus thermophilus/genética , Proteínas de Bactérias/genética , Carotenoides/genética , Genes Bacterianos , Complexos Multienzimáticos/genética , beta-Galactosidase/genética
4.
FEBS J ; 282(11): 2232-44, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-25787021

RESUMO

GM130 is a cytoplasmic peripheral membrane protein localized on the cis side of the Golgi apparatus. GM130 is proposed to function as a membrane skeleton, maintaining the structure of the Golgi apparatus, and as a vesicle tether that facilitates vesicle fusion to the Golgi membrane. More than 60% of the GM130 molecule is believed to exist as coiled-coil structures with a probability above 90%, based on its primary amino acid sequence. The predicted coiled-coil region was similar to that of yeast Uso1p and its mammalian homolog, p115, both of which form coiled-coil homodimers. Therefore, GM130 has long been thought to form a homodimer with a rod-like shape. However, our biochemical and electron microscopical analyses revealed that GM130 is a parallel homotetramer with a flexible rod-like structure with I- and Y-shaped conformations. The structure of the N-terminal region may interchange between an open conformation (branched or Y-shaped) and a closed conformation (non-branched or I-shaped), possibly with the help of interacting molecules. This conformational change may alter the oligomeric state of the GM130 molecules and the function of GM130 in the vesicle tethering and the maintenance of the Golgi structure.


Assuntos
Autoantígenos/química , Proteínas de Membrana/química , Animais , Autoantígenos/ultraestrutura , Humanos , Proteínas de Membrana/ultraestrutura , Modelos Moleculares , Estrutura Quaternária de Proteína , Estrutura Terciária de Proteína , Ratos
5.
Biochem Biophys Res Commun ; 456(1): 275-81, 2015 Jan 02.
Artigo em Inglês | MEDLINE | ID: mdl-25436429

RESUMO

p230/golgin-245 is a trans-Golgi coiled-coil protein that is known to participate in regulatory transport from the trans-Golgi network (TGN) to the cell surface. We investigated the role of p230 and its interacting protein, microtubule actin crosslinking protein 1 (MACF1), in amino acid starvation-induced membrane transport. p230 or MACF1 knock-down (KD) cells failed to increase the autophagic flow rate and the number of microtubule-associated protein 1 light chain 3 (LC3)-positive puncta under starvation conditions. Loss of p230 or MACF1 impaired mAtg9 recruitment to peripheral phagophores from the TGN, which was observed in the early step of autophagosome formation. Overexpression of the p230-binding domain of MACF1 resulted in the inhibition of mAtg9 trafficking in starvation conditions as in p230-KD or MACF1-KD cells. These results indicate that p230 and MACF1 cooperatively play an important role in the formation of phagophore through starvation-induced transport of mAtg9-containing membranes from the TGN. In addition, p230 itself was detected in autophagosomes/autolysosome with p62 or LC3 during autophagosome biogenesis. Thus, p230 is an important molecule in phagophore formation, although it remains unclear whether p230 has any role in late steps of autophagy.


Assuntos
Autoantígenos/metabolismo , Autofagia , Proteínas de Membrana/metabolismo , Proteínas dos Microfilamentos/metabolismo , Actinas/metabolismo , Transporte Biológico , Membrana Celular/metabolismo , Complexo de Golgi/metabolismo , Células HeLa , Humanos , Microtúbulos/metabolismo , Fagossomos/metabolismo , Plasmídeos/metabolismo , Transporte Proteico , RNA Interferente Pequeno/metabolismo
6.
Epilepsy Res ; 108(3): 420-32, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24480790

RESUMO

Mutations in GABRG2, which encodes the γ2 subunit of GABAA receptors, can cause both genetic epilepsy with febrile seizures plus (GEFS+) and Dravet syndrome. Most GABRG2 truncating mutations associated with Dravet syndrome result in premature termination codons (PTCs) and are stably translated into mutant proteins with potential dominant-negative effects. This study involved search for mutations in candidate genes for Dravet syndrome, namely SCN1A, 2A, 1B, 2B, GABRA1, B2, and G2. A heterozygous nonsense mutation (c.118C>T, p.Q40X) in GABRG2 was identified in dizygotic twin girls with Dravet syndrome and their apparently healthy father. Electrophysiological studies with the reconstituted GABAA receptors in HEK cells showed reduced GABA-induced currents when mutated γ2 DNA was cotransfected with wild-type α1 and ß2 subunits. In this case, immunohistochemistry using antibodies to the α1 and γ2 subunits of GABAA receptor showed granular staining in the soma. In addition, microinjection of mutated γ2 subunit cDNA into HEK cells severely inhibited intracellular trafficking of GABAA receptor subunits α1 and ß2, and retention of these proteins in the endoplasmic reticulum. The mutated γ2 subunit-expressing neurons also showed impaired axonal transport of the α1 and ß2 subunits. Our findings suggested that different phenotypes of epilepsy, e.g., GEFS+ and Dravet syndrome (which share similar abnormalities in causative genes) are likely due to impaired axonal transport associated with the dominant-negative effects of GABRG2.


Assuntos
Códon sem Sentido/genética , Epilepsia/genética , Receptores de GABA-A/genética , Receptores de GABA-A/metabolismo , Animais , Encéfalo/metabolismo , Encéfalo/patologia , Células Cultivadas , Pré-Escolar , Epilepsias Mioclônicas/genética , Epilepsias Mioclônicas/patologia , Feminino , Regulação da Expressão Gênica , Células HEK293 , Hipocampo/citologia , Humanos , Lactente , Japão , Masculino , Potenciais da Membrana/efeitos dos fármacos , Potenciais da Membrana/genética , Camundongos , Modelos Moleculares , Neurônios/efeitos dos fármacos , Neurônios/fisiologia , Subunidades Proteicas/genética , Transporte Proteico/genética , Frações Subcelulares/metabolismo , Frações Subcelulares/ultraestrutura , Gêmeos Dizigóticos
7.
Cytokine ; 64(3): 642-5, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24084331

RESUMO

IL-17RA, a member of the interleukin (IL)-17 receptor family, is a single membrane-spanning protein that ubiquitously expressed on the cell surface. IL-17RA transduces IL-17A, IL-17F, and IL-17A/F heterodimer-mediated signals by forming a complex with IL-17RC, and also signals the IL-17E (also known as IL-25) response in combination with IL-17RB (also known as IL-25R). Previously, soluble isoforms of human IL-17RC and IL-17RB have been reported, but the existence of a soluble isoform of human IL-17RA has remained unclear. Here, we report the identification of a soluble isoform of human IL-17RA at the mRNA and protein levels. Reverse transcribed PCR experiments showed that the IL-17RA variant is generated by spliced out of exon 11 encoding the transmembrane region in a variety of human tissues. The soluble IL-17RA isoform was detected in the culture media of human cell lines by Western blotting. The existence of the soluble IL-17RA isoform sheds new light on the regulation of IL-17RA mediated responses.


Assuntos
Processamento Alternativo , Éxons/genética , Perfilação da Expressão Gênica , Receptores de Interleucina-17/genética , Sequência de Bases , Western Blotting , Linhagem Celular , Feminino , Humanos , Masculino , Dados de Sequência Molecular , Isoformas de Proteínas/química , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Receptores de Interleucina-17/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Homologia de Sequência do Ácido Nucleico , Solubilidade
8.
Mol Biol Cell ; 24(18): 2907-17, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23885118

RESUMO

Docking and fusion of transport vesicles/carriers with the target membrane involve a tethering factor-mediated initial contact followed by soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE)-catalyzed membrane fusion. The multisubunit tethering CATCHR family complexes (Dsl1, COG, exocyst, and GARP complexes) share very low sequence homology among subunits despite likely evolving from a common ancestor and participate in fundamentally different membrane trafficking pathways. Yeast Tip20, as a subunit of the Dsl1 complex, has been implicated in retrograde transport from the Golgi apparatus to the endoplasmic reticulum. Our previous study showed that RINT-1, the mammalian counterpart of yeast Tip20, mediates the association of ZW10 (mammalian Dsl1) with endoplasmic reticulum-localized SNARE proteins. In the present study, we show that RINT-1 is also required for endosome-to-trans-Golgi network trafficking. RINT-1 uncomplexed with ZW10 interacts with the COG complex, another member of the CATCHR family complex, and regulates SNARE complex assembly at the trans-Golgi network. This additional role for RINT-1 may in part reflect adaptation to the demand for more diverse transport routes from endosomes to the trans-Golgi network in mammals compared with those in a unicellular organism, yeast. The present findings highlight a new role of RINT-1 in coordination with the COG complex.


Assuntos
Proteínas de Ciclo Celular/metabolismo , Complexos Multiproteicos/metabolismo , Proteínas SNARE/metabolismo , Rede trans-Golgi/metabolismo , Toxina da Cólera/metabolismo , Proteínas Cromossômicas não Histona/metabolismo , Retículo Endoplasmático/metabolismo , Endossomos/metabolismo , Células HeLa , Humanos , Proteínas Associadas aos Microtúbulos/metabolismo , Modelos Biológicos , Estrutura Terciária de Proteína , Transporte Proteico , Sintaxina 16/metabolismo
9.
Gene ; 527(2): 655-62, 2013 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-23845779

RESUMO

Strains of Thermus thermophilus produce unique carotenoids called thermozeaxanthins and their colonies are light-yellow pigmented. Here, we developed a new cloning system allowing for the rapid and convenient detection of recombinants by color screening based on carotenoid production in T. thermophilus. We constructed two cloning vectors that overexpress the crtB gene encoding a phytoene synthase under the strong promoter of the slpA gene. Phytoene synthase is one of essential enzymes for the production of carotenoids. We also isolated a carotenoid-overproducing mutant that formed orange colonies. Because disruption of crtB in the carotenoid-overproducing mutant resulted in white colonies, we used the disruptant as a host strain. Whereas transformants carrying a new cloning vector, pTRK1-PRslpA-crtBcas, grew into unusual red-pigmented colonies probably because of the extreme accumulation of thermozeaxanthins, those carrying the vector with a foreign DNA inserts formed white colonies. Thus, recombinants can be detected easily by color screening (red/white screening) in T. thermophilus. This cloning system requires no additional chromogenic substrate in the medium. We also constructed a promoter-probe vector, pTRK1-crtBmcs-PP, employing the open reading frame of crtB with multiple cloning sites. Using this vector, a series of colony-color phenotypes is observed probably depending on promoter activities of foreign DNA inserts, which enables the rapid probing of promoters. These vectors are useful to simplify cloning procedures and to identify the promoters of different strengths in T. thermophilus.


Assuntos
Alquil e Aril Transferases/genética , DNA Bacteriano/genética , Genes Bacterianos , Thermus thermophilus/genética , Sequência de Bases , Clonagem Molecular , Cor , Primers do DNA , Vetores Genéticos , Geranil-Geranildifosfato Geranil-Geraniltransferase , Reação em Cadeia da Polimerase
10.
Mol Brain ; 6: 19, 2013 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-23639079

RESUMO

BACKGROUND: Dravet syndrome is a devastating infantile-onset epilepsy syndrome with cognitive deficits and autistic traits caused by genetic alterations in SCN1A gene encoding the α-subunit of the voltage-gated sodium channel Na(v)1.1. Disease modeling using patient-derived induced pluripotent stem cells (iPSCs) can be a powerful tool to reproduce this syndrome's human pathology. However, no such effort has been reported to date. We here report a cellular model for DS that utilizes patient-derived iPSCs. RESULTS: We generated iPSCs from a Dravet syndrome patient with a c.4933C>T substitution in SCN1A, which is predicted to result in truncation in the fourth homologous domain of the protein (p.R1645*). Neurons derived from these iPSCs were primarily GABAergic (>50%), although glutamatergic neurons were observed as a minor population (<1%). Current-clamp analyses revealed significant impairment in action potential generation when strong depolarizing currents were injected. CONCLUSIONS: Our results indicate a functional decline in Dravet neurons, especially in the GABAergic subtype, which supports previous findings in murine disease models, where loss-of-function in GABAergic inhibition appears to be a main driver in epileptogenesis. Our data indicate that patient-derived iPSCs may serve as a new and powerful research platform for genetic disorders, including the epilepsies.


Assuntos
Epilepsias Mioclônicas/patologia , Células-Tronco Pluripotentes Induzidas/patologia , Modelos Biológicos , Potenciais de Ação , Adulto , Diferenciação Celular , Epilepsias Mioclônicas/fisiopatologia , Feminino , Genes Reporter/genética , Humanos , Células-Tronco Pluripotentes Induzidas/metabolismo , Lactente , Lentivirus/metabolismo , Canal de Sódio Disparado por Voltagem NAV1.1/metabolismo , Neurônios/metabolismo , Neurônios/patologia , Parvalbuminas/genética , Parvalbuminas/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Reação em Cadeia da Polimerase em Tempo Real , Adulto Jovem
11.
Plasmid ; 67(3): 272-5, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22252135

RESUMO

Two versatile shuttle vectors for Thermus thermophilus and Escherichia coli were developed on the basis of the T. thermophilus cryptic plasmid pTT8 and E. coli vector pUC13. These shuttle vectors, pTRK1T and pTRH1T, carry a gene encoding a protein homologous to replication protein derived from pTT8, a replicon for E. coli, new multiple cloning sites and a lacZα gene from E. coli vector pUC13, and also have a gene encoding a thermostable protein that confers resistance to kanamycin or hygromycin, which can be used as a selection marker in T. thermophilus. These shuttle vectors are useful to develop enzymes and proteins of biotechnological interest. We also constructed a plasmid, pUC13T, which carries the same multiple cloning sites of pTRK1T and pTRH1T. These vectors should facilitate cloning procedures both in E. coli and T. thermophilus.


Assuntos
Clonagem Molecular , Escherichia coli/genética , Regulação Bacteriana da Expressão Gênica , Vetores Genéticos/genética , Thermus thermophilus/genética , Sequência de Aminoácidos , Cinamatos , Genes Bacterianos , Marcadores Genéticos , Higromicina B/análogos & derivados , Canamicina , Dados de Sequência Molecular , Plasmídeos/genética , Análise de Sequência de DNA , beta-Galactosidase/genética , beta-Galactosidase/metabolismo
12.
Cell Struct Funct ; 36(2): 171-85, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21757827

RESUMO

The Yip1 domain family (YIPF) proteins are homologues of yeast Yip1p and Yif1p, which are proposed to function in ER to Golgi transport. Here, we report the characterization of YIPF3 and YIPF4, homologues of human Yif1p and Yip1p, respectively. Immunofluorescence and immuno-electron microscopy showed that both YIPF3 and YIPF4 are clearly concentrated in the cis-Golgi. While YIPF4 was detected as a single mobility form consistent with its predicted molecular weight, three different mobility forms of YIPF3 were detected by western blotting. Biochemical and immunofluorescence experiments strongly indicated that YIPF3 is synthesized in the ER as a N-glycosylated form (40 kDa), is then O-glycosylated in the Golgi apparatus to become a lower mobility form (46 kDa) and finally becomes a higher mobility form cleaved at its C-terminal luminal domain (36 kDa). YIPF3 and YIPF4 form a complex in the Golgi apparatus, and this was suggested to be important for their proper localization and function. The knockdown of YIPF3 or YIPF4 in HeLa cells induced fragmentation of the Golgi apparatus, suggesting their involvement in the maintenance of the Golgi structure.


Assuntos
Complexo de Golgi/metabolismo , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Proteínas Adaptadoras de Transporte Vesicular , Sequência de Aminoácidos , Retículo Endoplasmático/química , Retículo Endoplasmático/metabolismo , Glicosilação , Complexo de Golgi/química , Células HeLa , Humanos , Dados de Sequência Molecular , Mutação , Estrutura Terciária de Proteína , Interferência de RNA , RNA Interferente Pequeno/metabolismo , Proteínas Recombinantes/análise , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Proteínas de Saccharomyces cerevisiae/química , Proteínas de Saccharomyces cerevisiae/metabolismo
13.
Cell Struct Funct ; 36(1): 1-12, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21150128

RESUMO

When increased production of secretory proteins overwhelms the capacity of the endoplasmic reticulum (ER) and the Golgi apparatus, eukaryotic cells expand their capacity to sustain secretory function. The capacity of the ER is enhanced by the mechanism called the ER stress response, but the mechanism regulating Golgi capacity (the Golgi stress response) has remained unclear. Here, we found that transcription of Golgi-related genes, including glycosylation enzymes as well as factors involved in post-Golgi vesicular transport and maintenance of Golgi structure, was upregulated upon treatment with monensin, an ionophore that disrupts the function of acidic organelles, including the Golgi apparatus and lysosomes by neutralizing their lumen. This transcriptional induction was found to be commonly regulated by a novel cis-acting element called the Golgi apparatus stress response element (GASE), whose consensus sequence is ACGTGgc. When the function of the Golgi apparatus was specifically disturbed by overexpression of GCP60, a Golgi-localized protein that binds to giantin, transcription from GASE was significantly induced. These results suggest that mammalian cells have the Golgi stress response, and that GASE regulates transcriptional induction involved in the Golgi stress response.


Assuntos
Complexo de Golgi/fisiologia , Elementos de Resposta/genética , Estresse Fisiológico/genética , Ativação Transcricional/genética , Sequência de Bases , Complexo de Golgi/efeitos dos fármacos , Células HeLa , Humanos , Monensin/farmacologia , Elementos de Resposta/efeitos dos fármacos , Estresse Fisiológico/efeitos dos fármacos , Ativação Transcricional/efeitos dos fármacos
14.
Mol Biol Rep ; 38(6): 3875-82, 2011 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-21107719

RESUMO

In fission yeast Schizosaccharomyces pombe, the directions of cell growth change from a monopolar manner to a bipolar manner, which is known as 'New End Take Off' (NETO). We previously found that Arf6, a member (class III) of the ADP-ribosylation factor GTPase (Arf) family, is necessary for NETO in fission yeast. Here we report the characterization of a S. pombe gene, ucp3, encoding a putative Arf GTPase-activating protein (GAP) for Arf6. The Ucp3 contains Arf GAP domain, and has a high similarity to Gts1, which was identified as a GAP for Arf3 (class III Arf) in Saccharomyces cerevisiae. Overexpression of ucp3 inhibited growth from new end possibly by disturbing the GDP/GTP-cycling of Arf6. Gene disruption of ucp3 revealed that Ucp3 is essential for cell viability. Ucp3 uniformly localizes to the cell periphery. And its localization is not dependent on microtubules, actin cytoskeletons, Arf6 and Syt22 (guanine nucleotide exchange factor for Arf6). We hypothesize that Ucp3 functions as a GAP for Arf6. Moreover, Ucp3 might have another function important for cell viability.


Assuntos
Proteínas Ativadoras de GTPase/genética , Genes Fúngicos/genética , Canais Iônicos/genética , Proteínas Mitocondriais/genética , Proteínas de Schizosaccharomyces pombe/genética , Schizosaccharomyces/genética , Actinas/metabolismo , Sequência de Aminoácidos , Proteínas Ativadoras de GTPase/química , Proteínas Ativadoras de GTPase/metabolismo , Deleção de Genes , Canais Iônicos/química , Canais Iônicos/metabolismo , Viabilidade Microbiana , Microtúbulos/metabolismo , Proteínas Mitocondriais/química , Proteínas Mitocondriais/metabolismo , Modelos Biológicos , Dados de Sequência Molecular , Transporte Proteico , Schizosaccharomyces/citologia , Schizosaccharomyces/crescimento & desenvolvimento , Schizosaccharomyces/metabolismo , Frações Subcelulares/metabolismo , Proteína Desacopladora 3
15.
Traffic ; 11(12): 1552-66, 2010 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-20874812

RESUMO

The coiled-coil Golgi membrane protein golgin-84 functions as a tethering factor for coat protein I (COPI) vesicles. Protein interaction analyses have revealed that golgin-84 interacts with another tether, the conserved oligomeric Golgi (COG) complex, through its subunit Cog7. Therefore, we explored the function of golgin-84 as the tether for COPI vesicles of intra-Golgi retrograde traffic. First, glycosylic maturation of both plasma membrane (CD44) and lysosomal (lamp1) glycoproteins was distorted in golgin-84 knockdown (KD) cells. The depletion of golgin-84 caused fragmentation of the Golgi with the mislocalization of Golgi resident proteins, resulting in the accumulation of vesicles carrying intra-Golgi soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) and cis-Golgi membrane protein GPP130. Similar observations were obtained by diminution of the COG complex, suggesting a strong correlation between the two tethers. Indeed, COG complex-dependent (CCD) vesicles that accumulate in Cog3 or Cog7 KD cells carried golgin-84. Surprisingly, the interaction between golgin-84 and another candidate tethering partner CASP (CDP/cut alternatively spliced product) decreased in Cog3 KD cells. These results indicate that golgin-84 on COPI vesicles interact with the COG complex before SNARE assembly, suggesting that the interaction of golgin-84 with COG plays an important role in the tethering process of intra-Golgi retrograde vesicle traffic.


Assuntos
Complexo de Golgi/metabolismo , Proteínas de Membrana/metabolismo , Proteínas Adaptadoras de Transporte Vesicular/metabolismo , Transporte Biológico , Linhagem Celular , Proteínas da Matriz do Complexo de Golgi , Humanos , Receptores de Hialuronatos , Proteínas de Membrana Lisossomal/metabolismo , Ligação Proteica , Proteínas SNARE/metabolismo , Proteínas de Transporte Vesicular/metabolismo
16.
FEMS Microbiol Lett ; 294(2): 191-7, 2009 May.
Artigo em Inglês | MEDLINE | ID: mdl-19431238

RESUMO

In fission yeast Schizosaccharomyces pombe, the directions of cell growth change from monopolar to bipolar in character, which is known as 'new end take off ' (NETO). We previously found that arf6p, a member (class III) of the ADP-ribosylation factor (Arf) family, is necessary for NETO in fission yeast. Here we report the characterization of an S. pombe gene, syt22(+), encoding a putative Arf guanine nucleotide exchange factor (GEF). The syt22 protein contains a Sec7 domain and a PH domain conserved in the mammalian EFA6 GEF family, and has high similarity to Yel1p, which was identified as a GEF for Arf3p (class III Arf) in Saccharomyces cerevisiae. syt22Delta cells, like arf6Delta cells, completely failed to undergo NETO. Syt22p uniformly localizes to the cell periphery. Its localization is not dependent on microtubules, actin cytoskeletons or arf6p. We hypothesize that syt22p functions as a GEF for arf6p.


Assuntos
Fatores de Ribosilação do ADP/fisiologia , Processos de Crescimento Celular , Proteínas Fúngicas/fisiologia , Fatores de Ribosilação do ADP/química , Actinas/ultraestrutura , Sequência de Aminoácidos , Polaridade Celular , Proteínas de Fluorescência Verde , Microtúbulos/ultraestrutura , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Proteínas Recombinantes de Fusão/metabolismo , Schizosaccharomyces , Análise de Sequência de Proteína
17.
J Neurophysiol ; 100(4): 1835-47, 2008 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18667548

RESUMO

A-type K+ currents have unique kinetic and voltage-dependent properties that allow them to finely tune synaptic integration, action potential (AP) shape and firing patterns. In hippocampal CA1 pyramidal neurons, Kv4 channels make up the majority of the somatodendritic A-type current. Studies in heterologous expression systems have shown that Kv4 channels interact with transmembrane dipeptidyl-peptidase-like proteins (DPPLs) to regulate the surface trafficking and biophysical properties of Kv4 channels. To investigate the influence of DPPLs in a native system, we conducted voltage-clamp experiments in patches from CA1 pyramidal neurons expressing short-interfering RNA (siRNA) targeting the DPPL variant known to be expressed in hippocampal pyramidal neurons, DPPX (siDPPX). In accordance with heterologous studies, we found that DPPX downregulation in neurons resulted in depolarizing shifts of the steady-state inactivation and activation curves, a shallower conductance-voltage slope, slowed inactivation, and a delayed recovery from inactivation for A-type currents. We carried out current-clamp experiments to determine the physiological effect of the A-type current modifications by DPPX. Neurons expressing siDPPX exhibited a surprisingly large reduction in subthreshold excitability as measured by a decrease in input resistance, delayed time to AP onset, and an increased AP threshold. Suprathreshold DPPX downregulation resulted in slower AP rise and weaker repolarization. Computer simulations supported our experimental results and demonstrated how DPPX remodeling of A-channel properties can result in opposing sub- and suprathreshold effects on excitability. The Kv4 auxiliary subunit DPPX thus acts to increase neuronal responsiveness and enhance signal precision by advancing AP initiation and accelerating both the rise and repolarization of APs.


Assuntos
Hipocampo/fisiologia , Células Piramidais/fisiologia , Canais de Potássio Shal/fisiologia , Potenciais de Ação/genética , Potenciais de Ação/fisiologia , Animais , Células CHO , Simulação por Computador , Cricetinae , Cricetulus , Interpretação Estatística de Dados , Eletrofisiologia , Hipocampo/citologia , Técnicas de Cultura de Órgãos , Técnicas de Patch-Clamp , RNA Interferente Pequeno/genética , RNA Interferente Pequeno/farmacologia , Sindbis virus/genética , Membranas Sinápticas/fisiologia
18.
Exp Cell Res ; 314(19): 3427-43, 2008 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-18718466

RESUMO

Yip1p/Yif1p family proteins are five-span transmembrane proteins localized in the Golgi apparatus and the ER. There are nine family members in humans, and YIPF5 and YIF1A are the human orthologs of budding yeast Yip1p and Yif1p, respectively. We raised antisera against YIPF5 and YIF1A and examined the localization of endogenous proteins in HeLa cells. Immunofluorescence, immunoelectron microscopy and subcellular fractionation analysis suggested that YIPF5 and YIF1A are not restricted to ER exit sites but also localized in the ER-Golgi intermediate compartment (ERGIC) and some in the cis-Golgi at steady state. Along with ERGIC53, YIPF5 and YIF1A remained in the cytoplasmic punctate structures after brefeldin A treatment, accumulated in the ERGIC and the cis-Golgi after treatment with AlF4- and accumulated in the ER when ER to Golgi transport was inhibited by Sar1(H79G). These results supported the localization of YIPF5 and YIF1A in the ERGIC and the cis-Golgi, and strongly suggested that they are recycling between the ER and the Golgi apparatus. Analysis by blue native PAGE and co-immunoprecipitation showed that YIPF5 and YIF1A form stable complexes of three different sizes. Interestingly, the knockdown of YIPF5 or YIF1A caused partial disassembly of the Golgi apparatus suggesting that YIPF5 and YIF1A are involved in the maintenance of the Golgi structure.


Assuntos
Retículo Endoplasmático/metabolismo , Complexo de Golgi/metabolismo , Proteínas de Membrana/metabolismo , Proteínas de Transporte Vesicular/metabolismo , Retículo Endoplasmático/ultraestrutura , Imunofluorescência , Complexo de Golgi/ultraestrutura , Células HeLa , Humanos , Proteínas de Membrana/análise , Proteínas de Membrana/genética , Microscopia Imunoeletrônica , Transporte Proteico , Proteínas de Transporte Vesicular/análise , Proteínas de Transporte Vesicular/genética
19.
FEBS J ; 275(11): 2727-37, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-18422967

RESUMO

Hypophosphatasia, a congenital metabolic disease related to the tissue-nonspecific alkaline phosphatase gene (TNSALP), is characterized by reduced serum alkaline phosphatase levels and defective mineralization of hard tissues. A replacement of valine with alanine at position 406, located in the crown domain of TNSALP, was reported in a perinatal form of hypophosphatasia. To understand the molecular defect of the TNSALP (V406A) molecule, we examined this missense mutant protein in transiently transfected COS-1 cells and in stable CHO-K1 Tet-On cells. Compared with the wild-type enzyme, the mutant protein showed a markedly reduced alkaline phosphatase activity. This was not the result of defective transport and resultant degradation of TNSALP (V406A) in the endoplasmic reticulum, as the majority of newly synthesized TNSALP (V406A) was conveyed to the Golgi apparatus and incorporated into a cold detergent insoluble fraction (raft) at a rate similar to that of the wild-type TNSALP. TNSALP (V406A) consisted of a dimer, as judged by sucrose gradient centrifugation, suggestive of its proper folding and correct assembly, although this mutant showed increased susceptibility to digestion by trypsin or proteinase K. When purified as a glycosylphosphatidylinositol-anchorless soluble form, the mutant protein exhibited a remarkably lower Kcat/Km value compared with that of the wild-type TNSALP. Interestingly, leucine and isoleucine, but not phenylalanine, were able to substitute for valine, pointing to the indispensable role of residues with a longer aliphatic side chain at position 406 of TNSALP. Taken together, this particular mutation highlights the structural importance of the crown domain with respect to the catalytic function of TNSALP.


Assuntos
Alanina/química , Fosfatase Alcalina/química , Hipofosfatasia/metabolismo , Valina/química , Fosfatase Alcalina/fisiologia , Animais , Células CHO , Células COS , Chlorocebus aethiops , Cricetinae , Cricetulus , Humanos , Cinética , Conformação Proteica , Dobramento de Proteína , Estrutura Terciária de Proteína
20.
Traffic ; 8(3): 270-84, 2007 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-17274799

RESUMO

The vesicle-tethering protein p115 functions in endoplasmic reticulum-Golgi trafficking. We explored the function of homologous region 2 (HR2) of the p115 head domain that is highly homologous with the yeast counterpart, Uso1p. By expression of p115 mutants in p115 knockdown (KD) cells, we found that deletion of HR2 caused an irregular assembly of the Golgi, which consisted of a cluster of mini-stacked Golgi fragments, and gathered around microtubule-organizing center in a microtubule-dependent manner. Protein interaction analyses revealed that p115 HR2 interacted with Cog2, a subunit of the conserved oligomeric Golgi (COG) complex that is known another putative cis-Golgi vesicle-tethering factor. The interaction between p115 and Cog2 was found to be essential for Golgi ribbon reformation after the disruption of the ribbon by p115 KD or brefeldin A treatment and recovery by re-expression of p115 or drug wash out, respectively. The interaction occurred only in interphase cells and not in mitotic cells. These results strongly suggested that p115 plays an important role in the biogenesis and maintenance of the Golgi by interacting with the COG complex on the cis-Golgi in vesicular trafficking.


Assuntos
Proteínas Adaptadoras de Transporte Vesicular/metabolismo , Complexo de Golgi/metabolismo , Proteínas de Membrana/metabolismo , Proteínas de Transporte Vesicular/metabolismo , Brefeldina A/farmacologia , Retículo Endoplasmático/metabolismo , Proteínas da Matriz do Complexo de Golgi , Células HeLa , Humanos , Proteínas de Membrana/genética , Mutação , Mapeamento de Interação de Proteínas , Estrutura Terciária de Proteína , Inibidores da Síntese de Proteínas/farmacologia , Transporte Proteico , Proteínas SNARE/metabolismo , Proteínas de Transporte Vesicular/genética
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