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1.
J Colloid Interface Sci ; 673: 700-710, 2024 Jun 10.
Artigo em Inglês | MEDLINE | ID: mdl-38901360

RESUMO

Phase behavior of nanoconfined fluids adsorbed in metal-organic frameworks is of paramount importance for the design of advanced materials for energy and gas storage, separations, electrochemical devices, sensors, and drug delivery, as well as for the pore structure characterization. Phase transformations in adsorbed fluids often involve long-lasting metastable states and hysteresis that has been well-documented in gas adsorption-desorption and nonwetting fluid intrusion-extrusion experiments. However, theoretical prediction of the observed nanophase behavior remains a challenging problem. The mesoscopic canonical, or mesocanonical, ensemble (MCE) is devised to study the nanophase behavior under conditions of controlled fluctuations to stabilize metastable and labile states. Here, we implement and apply the MCE Monte Carlo (MCEMC) simulation scheme to predict the origins of reversible and hysteric adsorption phase transitions in a series of practical MOF materials, including IRMOF-1, ZIF-412, UiO-66, Cu-BTC, IRMOF-74-V, VII, and IX. The MCEMC method, called the gauge cell method, allows to produce Van der Waals type isotherms with distinctive swings around the phase transition regions. The constructed isotherms determine the positions of phase equilibrium and spinodals, as well as the nucleation barriers separating metastable states. We demonstrate the unique capabilities of the MCEMC method in quantitative predictions of experimental observations compared with the conventional grand canonical and canonical ensemble simulations. The MCEMC method is implemented in the open-source RASPA and LAMMPS software packages and recommended for studies of adsorption behavior and pore structure characterization of MOFs and other nanoporous materials.

2.
J Phys Chem A ; 128(9): 1725-1735, 2024 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-38408339

RESUMO

Triply periodic minimal surfaces (TPMS) inspired by nature serve as a foundation for developing novel nanomaterials, such as templated silicas, graphene sponges, and schwarzites, with customizable optical, poroelastic, adsorptive, catalytic, and other properties. Computer simulations of reactions on TPMS using reactive intermolecular potentials hold great promise for constructing and screening potential TPMS with the desired properties. Here, we developed an off-lattice, surface-constrained Metropolis Monte Carlo (SC-MMC) algorithm that utilized a temperature quench process. The presented SC-MMC algorithm was used to investigate the process of graphitization reactions on the Schwarz primitive, Schwarz diamond, and Schoen gyroid TPMS, all with a cubic lattice parameter of 8 nm. We show that the optimized carbon TPMS exhibits a low energy, approximately -7.1 eV/atom, comparable to that of graphite and diamond crystals, along with a variety of topological defects. Furthermore, these structures showcase extensive and smooth surfaces characterized by a negative discrete Gaussian curvature, a distinctive feature indicative of an interconnected morphology. They possess specific surface areas of ∼2700 m2/g, comparable to graphene, and exhibit a significant porosity of around 90%. The theoretical X-ray correlation functions and nitrogen adsorption isotherms confirm that the constructed TPMS exhibit remarkably similar surface properties, although the pore space topology varies significantly.

3.
J Chem Inf Model ; 64(8): 3260-3268, 2024 Apr 22.
Artigo em Inglês | MEDLINE | ID: mdl-38315986

RESUMO

Metal-organic frameworks (MOFs) are nanoporous crystals which are widely used as selective adsorbents, separation membranes, catalysts, gas and energy storage media, and drug delivery vehicles. The unique adsorption and transport properties of MOFs are determined by their complex three-dimensional (3D) networks of pores, cages, and channels that differ in size, shape, and chemical composition. While the morphological structure of MOF crystals is known, practical MOF materials are rarely ideal crystals. They contain secondary phases, binders, residual chemicals, and various types of defects. It is of paramount importance to evaluate the degree of crystallinity and accessibility of different pore compartments to adsorb guest molecules. To this end, we recently suggested the method of fingerprint isotherms based on the comparison of the experimentally measured adsorption isotherms and theoretical isotherms on ideal MOF crystals produced by Monte Carlo (MC) simulations and decomposed with respect to different pore compartments [Parashar, S. ACS Appl. Nano Mater. 2021, 4, 5531-5540 and Dantas, S.; Neimark, A. V. ACS Appl. Mater. Interfaces 2020, 12, 15595-15605]. In this work, we develop an automated algorithm for pore network compartmentalization that is a prerequisite for calculations of the fingerprint isotherms. The proposed algorithm partitions the unit cell into realistically shaped compartments based on the geometric pore size distribution. The proposed method is demonstrated on several characteristic systems, including Cu-BTC, IRMOF-1, UiO-66, PCN-224, ZIF-412, and 56 structures from the CoRE MOF database.


Assuntos
Estruturas Metalorgânicas , Estruturas Metalorgânicas/química , Porosidade , Modelos Moleculares , Adsorção , Método de Monte Carlo
4.
J Colloid Interface Sci ; 650(Pt A): 28-39, 2023 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-37392497

RESUMO

COVID-19 is transmitted by airborne particles containing virions of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Coronavirus virions represent nanoparticles enveloped by a lipid bilayer decorated by a "crown" of Spike protein protrusions. Virus transmission into the cells is induced by binding of Spike proteins with ACE2 receptors of alveolar epithelial cells. Active clinical search is ongoing for exogenous surfactants and biologically active chemicals capable of hindering virion-receptor binding. Here, we explore by using coarse-grained molecular dynamics simulations the physico-chemical mechanisms of adsorption of selected pulmonary surfactants, zwitterionic dipalmitoyl phosphatidyl choline and cholesterol, and exogeneous anionic surfactant, sodium dodecyl sulfate, on the S1-domain of the Spike protein. We show that surfactants form micellar aggregates that selectively adhere to the specific regions of the S1-domain that are responsible for binding with ACE2 receptors. We find distinctly higher cholesterol adsorption and stronger cholesterol-S1 interactions in comparison with other surfactants, that is consistent with the experimental observations of the effects of cholesterol on COVID-19 infection. Distribution of adsorbed surfactant along the protein residue chain is highly specific and inhomogeneous with preferential adsorption around specific amino acid sequences. We observe preferential adsorption of surfactants on cationic arginine and lysine residues in the receptor-binding domain (RBD) that play an important role in ACE2 binding and are present in higher amounts in Delta and Omicron variants, which may lead to blocking direct Spike-ACE2 interactions. Our findings of strong selective adhesion of surfactant aggregates to Spike proteins have important implications for informing clinical search for therapeutic surfactants for curing and preventing COVID-19 caused by SARS-CoV-2 and its variants.


Assuntos
COVID-19 , SARS-CoV-2 , Humanos , SARS-CoV-2/metabolismo , Glicoproteína da Espícula de Coronavírus/química , Tensoativos , Enzima de Conversão de Angiotensina 2/química , Enzima de Conversão de Angiotensina 2/metabolismo , Adsorção , Ligação Proteica
5.
J Phys Chem Lett ; 13(30): 6961-6965, 2022 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-35877384

RESUMO

The hase behavior of confined fluids adsorbed in nanopores differs significantly from their bulk counterparts and depends on the chemical and structural properties of the confining structures. In general, phase transitions in nanoconfined fluids are reflected in stepwise adsorption isotherms with a pronounced hysteresis. Here, we show experimental evidence and an in silico interpretation of the reversible stepwise adsorption isotherm which is observed when methane is adsorbed in the rigid, crystalline metal-organic framework IRMOF-1 (MOF-5). In a very narrow range of pressures, the adsorbed fluid undergoes a structural and highly cooperative reconstruction and transition between low-density and high-density nanophases, as a result of the competition between the fluid-framework and fluid-fluid interactions. This mechanism evolves with temperature: below 110 K, a reversible stepwise isotherm is observed, which is a result of the bimodal distribution of the coexisting nanophases. This temperature may be considered as a critical temperature of methane confined to nanopores of IRMOF-1. Above 110 K, as the entropy contribution increases, the isotherm shape transforms to a common continuous S-shaped form that is characteristic to a gradual densification of the adsorbed phase as the pressure increases.

6.
bioRxiv ; 2022 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-35547841

RESUMO

COVID-19 is transmitted by inhaling SARS-CoV-2 virions, which are enveloped by a lipid bilayer decorated by a "crown" of Spike protein protrusions. In the respiratory tract, virions interact with surfactant films composed of phospholipids and cholesterol that coat lung airways. Here, we explore by using coarse-grained molecular dynamics simulations the physico-chemical mechanisms of surfactant adsorption on Spike proteins. With examples of zwitterionic dipalmitoyl phosphatidyl choline, cholesterol, and anionic sodium dodecyl sulphate, we show that surfactants form micellar aggregates that selectively adhere to the specific regions of S1 domain of the Spike protein that are responsible for binding with ACE2 receptors and virus transmission into the cells. We find high cholesterol adsorption and preferential affinity of anionic surfactants to Arginine and Lysine residues within S1 receptor binding motif. These findings have important implications for informing the search for extraneous therapeutic surfactants for curing and preventing COVID-19 by SARS-CoV-2 and its variants.

8.
Sci Rep ; 11(1): 23888, 2021 12 13.
Artigo em Inglês | MEDLINE | ID: mdl-34903800

RESUMO

Bariatric surgery (BS) improves outcomes in patients with myocardial infarction (MI). Here we tested the hypothesis that BS-mediated reduction in fatal MI could be attributed to its infarct-limiting effect. Wistar rats were randomized into five groups: control (CON), sham (SHAM), Roux-en-Y gastric bypass (RYGB), sleeve gastrectomy (SG), and ileotransposition (IT). Ten weeks later, animals were subjected to 30-min myocardial ischemia plus 120-min reperfusion. Infarct size (IS) and no-reflow area were determined histochemically. Fasting plasma levels of glucagon-like peptide-1 (GLP-1), leptin, ghrelin, and insulin were measured using ELISA. Compared with SHAM, RYGB and SG reduced IS by 22% (p = 0.011) and 10% (p = 0.027), and no-reflow by 38% (p = 0.01) and 32% (p = 0.004), respectively. IT failed to reduce IS and no-reflow. GLP-1 level was increased in the SG and RYGB groups compared with CON. In both the SG and RYGB, leptin level was decreased compared with CON and SHAM. In the SG group, ghrelin level was lower than that in the CON and SHAM. Insulin levels were not different between groups. In conclusion, RYGB and SG increased myocardial tolerance to ischemia-reperfusion injury of non-obese, non-diabetic rats, and their infarct-limiting effect is associated with decreased leptin and ghrelin levels and increased GLP-1 level.


Assuntos
Gastrectomia/métodos , Derivação Gástrica/métodos , Derivação Jejunoileal/métodos , Traumatismo por Reperfusão Miocárdica/prevenção & controle , Procedimentos Cirúrgicos Profiláticos/métodos , Animais , Íleo/cirurgia , Masculino , Ratos , Ratos Wistar
9.
J Phys Chem B ; 125(50): 13817-13828, 2021 12 23.
Artigo em Inglês | MEDLINE | ID: mdl-34905689

RESUMO

The morphology and stability of surfactant-loaded polyelectrolyte gels are of great interest for a variety of personal care, cosmetic, and pharmaceutical products. However, the mechanisms of surfactant interactions with gel-forming polymers are poorly understood and experimentally challenging. The aim of this work is to explore in silico the specifics of surfactant absorption within polyelectrolyte gels drawing on the examples of typical non-ionic octaethylene glycol monooctyl ether (C8E8) and anionic sodium dodecyl sulfate (SDS) surfactants and polyacrylic acid modified with hydrophobic sidechains mimicking the practically important Carbopol polymer. Using the systematically parameterized coarse-grained dissipative particle dynamics models, we generate and characterize the equilibrium conformations and swelling of the polymer films in aqueous solutions with the surfactant concentrations varied up to the critical micelle concentration (cmc). We discover the striking difference in interactions of Carbopol-like polymers with nonionic and ionic surfactants under mildly acidic conditions. The sorption of C8E8 within the polymer film is found substantial. As the surfactant concentration increases, the polymer film swells and, close to cmc, becomes unstable due to the formation and growth of water pockets filled with surfactant micelles. Sorption of SDS at the same bulk concentrations is found much lower, with only about 1% of surfactant mass fraction achieved at cmc. As the SDS concentration increases further, a lamellae structure is formed within the film, which remains stable. Reduced swelling and higher stability indicate better prospects of using SDS-type surfactants with Carbopol-based gels in formulations for detergents and personal care products.


Assuntos
Tensoativos , Resinas Acrílicas , Géis , Polieletrólitos , Dodecilsulfato de Sódio
10.
Adv Colloid Interface Sci ; 298: 102545, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34757286

RESUMO

Dissipative particle dynamics (DPD) is one of the most efficient mesoscale coarse-grained methodologies for modeling soft matter systems. Here, we comprehensively review the progress in theoretical formulations, parametrization strategies, and applications of DPD over the last two decades. DPD bridges the gap between the microscopic atomistic and macroscopic continuum length and time scales. Numerous efforts have been performed to improve the computational efficiency and to develop advanced versions and modifications of the original DPD framework. The progress in the parametrization techniques that can reproduce the engineering properties of experimental systems attracted a lot of interest from the industrial community longing to use DPD to characterize, help design and optimize the practical products. While there are still areas for improvements, DPD has been efficiently applied to numerous colloidal and interfacial phenomena involving phase separations, self-assembly, and transport in polymeric, surfactant, nanoparticle, and biomolecules systems.


Assuntos
Coloides , Nanopartículas , Polímeros , Tensoativos
11.
Life Sci ; 279: 119676, 2021 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-34087285

RESUMO

AIMS: The effects of three types of bariatric interventions on myocardial infarct size were tested in the rat model of type 2 diabetes mellitus (T2DM). We also evaluated the effects of bariatric surgery on no-reflow phenomenon and vascular dysfunction caused by T2DM. MAIN METHODS: Rats with T2DM were assigned into groups: without surgery, sham-operated, ileal transposition, Roux-en-Y gastric bypass, and sleeve gastrectomy. Oral glucose tolerance, glucagon-like peptide-1, and insulin levels were measured. Six weeks after surgery, the animals were subjected to myocardial ischemia-reperfusion followed by histochemical determination of infarct size (IS), no-reflow zone, and blood stasis area size. Vascular dysfunction was characterized using wire myography. KEY FINDINGS: All bariatric surgery types caused significant reductions in animal body weight and resulted in T2DM compensation. All bariatric interventions partially normalized glucagon-like peptide-1 responses attenuated by T2DM. IS was significantly smaller in animals with T2DM. Bariatric surgery provided no additional IS limitation compared with T2DM alone. Bariatric surgeries reversed T2DM-induced enhanced contractile responses of the mesenteric artery to 5-hydroxytryptamine. Sleeve gastrectomy normalized decreased nitric oxide synthase contribution to the endothelium-dependent vasodilatation in T2DM. SIGNIFICANCE: T2DM resulted in a reduction of infarct size and no-reflow zone size. Bariatric surgery provided no additional infarct-limiting effect, but it normalized T2DM-induced augmented vascular contractility and reversed decreased contribution of nitric oxide to endothelium-dependent vasodilatation typical of T2DM. All taken together, we suggest that this type of surgery may have a beneficial effect on T2DM-induced cardiovascular diseases.


Assuntos
Cirurgia Bariátrica/métodos , Diabetes Mellitus Experimental/cirurgia , Diabetes Mellitus Tipo 2/cirurgia , Angiopatias Diabéticas/prevenção & controle , Derivação Gástrica/métodos , Infarto do Miocárdio/prevenção & controle , Animais , Glicemia/análise , Diabetes Mellitus Experimental/complicações , Diabetes Mellitus Tipo 2/complicações , Angiopatias Diabéticas/etiologia , Angiopatias Diabéticas/patologia , Peptídeo 1 Semelhante ao Glucagon/análise , Masculino , Infarto do Miocárdio/etiologia , Infarto do Miocárdio/patologia , Ratos , Ratos Wistar
12.
J Colloid Interface Sci ; 602: 654-668, 2021 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-34147755

RESUMO

Morphological and transport properties of hydrated metal-substituted Nafion membranes doped with metal ions of different valency and coordination strength are explored using coarse-grained dissipative particle dynamics simulations. To incorporate the effects of metal-polymer complexation, we introduce a novel metal ion complexation model, in which the charged central metal ion is surrounded by dummy sites that coordinate with ligands. The model parameters are determined by matching the metal-ligand running coordination numbers and the diffusion coefficients obtained from atomistic simulations and/or experiments. The increase of valency and coordination strength is found to strongly influence both the morphology and transport characteristics of the membrane at all hydration levels. The membrane segregation into hydrophobic and hydrophilic sub-phases is affected by metal-sulphonate coordination induced crosslinking at the hydrophilic/hydrophobic interface. The simulation results indicate that the interfacial crosslinking influences the interfacial tension and thereby affect the growth and coalescence of water clusters upon the increase of hydration. Multivalent complexation hinders water and ion mobility and causes anomalous sub-diffusion and dramatic decrease of the water permeability and ionic conductivity. Our DPD model is found efficient in elucidating the mechanisms of coordination-induced cross-linking and complexation and predicting on a semi-quantitative level the morphological and transport properties of metal-substituted Nafion membranes depending on the ion valency and coordination strength. The proposed model can be further advanced and adopted for other polyelectrolyte systems, such as sulfonated block-copolymers, polysaccharide solutions and composites, and biopolymer assemblies.


Assuntos
Metais , Polímeros , Íons , Polieletrólitos , Água
13.
J Colloid Interface Sci ; 600: 229-242, 2021 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-34022721

RESUMO

HYPOTHESIS: Suspensions of nanoporous particles in non-wetting fluids (lyophobic nanoporous suspensions, LPNPS) are explored as energy absorbing materials for shock absorbers, bumpers, and energy storage. Upon application of pressure, the non-wetting fluid invades the pores transforming the impact energy into the interfacial energy that can be stored and released on demand. EXPERIMENTS: Here, we present a comprehensive experimental study of the dynamics of LPNPS compression within a wide range of shock impact energy for three types of mesoporous materials (Libersorb 23, Polysorb-1, and Silochrome-1.5) with water and Wood alloy as non-wetting fluids. FINDINGS: Three different regimes of the LPNPS compression-expansion cycle in response to the shock impact are distinguished as the impact energy increases: without fluid penetration into the pores, with partial penetration, and with complete pore filling. In two latter regimes, the suspension compressibility in the process of rapid compression increases by 2-4 decimal decades. This giant effect is associated with the onset of penetration of the non-wetting fluid into the nanopores upon achievement of a certain threshold pressure. The dynamic threshold pressure exceeds the threshold pressure of quasistatic intrusion and does not depends on the impact pressure, temperature, and suspension composition. A dynamic model of suspension compression is suggested that allows to separate the effects of the fluid intrusion into the pores and the elastic deformation of the system.

14.
ACS Nano ; 14(12): 17273-17284, 2020 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-33226210

RESUMO

Lipid membranes supported on solid surfaces and nanoparticles find multiple applications in industrial and biomedical technologies. Here, we explore in silico the mechanisms of the interactions of lipid membranes with nanostructured surfaces with deposited nanoparticles and explain the characteristic particle size dependence of the uniformity and stability of lipid coatings observed in vitro. Simulations are performed to demonstrate the specifics of 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) lipid membrane adhesion to hydrophilic and hydrophobic nanoparticles ranging in size from 1.5 to 40 nm using an original coarse-grained molecular dynamics model with implicit solvent and large simulation boxes (scales up to 280 × 154 × 69 nm3). We find that one of the major factors that affects the uniformity and stability of lipid coatings is the disjoining pressure in the water hydration layer formed between the lipid membrane and hydrophilic solid surface. This effect is accounted for by introducing a special long-range lipid-solid interaction potential that mimics the effects of the disjoining pressure in thin water layers. Our simulations reveal the physical mechanisms of interactions of lipid bilayers with solid surfaces that are responsible for the experimentally observed nonmonotonic particle size dependence of the uniformity and stability of lipid coatings: particles smaller than the hydration layer thickness (<2-3 nm) or larger than ∼20 nm are partially or fully enfolded by a lipid bilayer, whereas particles of the intermediate size (5-20 nm) cause membrane perforation and pore formation. In contrast, hydrophobic nanoparticles, which repel the hydration layer, tend to be encapsulated within the hydrophobic interior of the membrane and coated by the lipid monolayer. The proposed model can be further extended and applied to a wide class of systems comprising nanoparticles and nanostructured substrates interacting with lipid and surfactant bilayers and monolayers.

15.
Langmuir ; 36(48): 14686-14698, 2020 Dec 08.
Artigo em Inglês | MEDLINE | ID: mdl-33216560

RESUMO

Adsorption of surfactants at gas-liquid interfaces that causes reduction in the surface tension is a classical problem in colloid and interface science with multiple practical applications in oil and gas recovery, separations, cosmetics, personal care, and biomedicine. Here, we develop an original coarse-grained model of the liquid-gas interface within the conventional dissipative particle dynamics (DPD) framework with the goal of quantitatively predicting the surface tension in the presence of surfactants. As a practical case-study example, we explore the adsorption of the cationic surfactant cetyl trimethyl ammonium bromide (CTAB) on the air-water interface. The gas phase is modeled as a DPD fluid composed of fictitious hard-core "gas" beads with exponentially decaying repulsive potentials to prevent penetration of the liquid phase components. A rigorous parametrization scheme is proposed based on matching the bulk and interfacial properties of water and octane taken as the reference compounds. Quantitative agreement between the simulated and experimental surface tension of CTAB solutions is found for a wide range of bulk surfactant concentrations (∼10-3 to ∼1 mmol/L) with the reduction of the surface tension from ∼72 mN/m (pure water) to the limiting value of ∼37.5 mN/m at the critical micelle concentration. The gas phase DPD model with the proposed parametrization scheme can be extended and applied to modeling various gas-liquid interfaces with surfactant and lipid monolayers, such as bubble suspensions, foams, froths, etc.

16.
J Colloid Interface Sci ; 578: 77-88, 2020 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-32512398

RESUMO

Soft porous crystals undergo large structural transformations under a variety of physical stimuli. Breathing-like transformations, occurring with a large volume change, have been associated with an existence of bi-stable or multi-stable crystal structures. Understanding of the mechanism of these transformations is essential for their potential applications in gas adsorption, separation and storage. However, the generic description is still missing. Here, we provide a detailed, multiscale qualitative and quantitative analysis of the adsorption-induced "breathing" transformations in two metal organic frameworks (MOFs): MIL-53(Al) which is a reference case of our approach, and recently synthesized JUK-8, which does not show any bistability without adsorbate. The proposed approach is based on atomistic simulations and does not require any empirical or adjustable parameters. It allows for a prediction of potential structural transformations in MOFs including the adsorption induced deformations derived from adsorption stress model. We also show that the quantitative agreement between calculated and experimental results critically depends on the quality of the dispersion energy correction. Our methodology represents a new, powerful tool for designing and screening of flexible materials, alternative and complimentary to experimental approaches.

17.
J Colloid Interface Sci ; 578: 422-430, 2020 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-32535424

RESUMO

Customized micro- and mesoporous carbons are in high demand for ecofriendly technologies. Reactivation of the well-characterized pitch-based activated carbon fiber (ACF) can provide a clear understanding of the structural mechanism of steam activation, which would be helpful for designing better micro- and mesoporous carbons. ACFs were reactivated with steam at 973-1173 K. X-ray diffraction and Raman spectroscopy indicated that the stacking number of graphene-like layers of the pore wall decreased with an increase in the reactivation temperature. The average fiber diameter of the ACFs, which was measured via scanning electron microscopy, decreased with the increase in the reactivation temperature. The relationship between the decrease in the fiber diameter and the burn-off suggested that reactivation above 1023 K produced micropores inside the fiber. A deconvolution analysis of the pore-size distribution revealed the variation of the distribution. The peak difference was approximately 0.3 nm, depending on the reactivation temperature. These results indicate that reactivation with steam proceeds via the preferential one-by-one gasification of less-crystalline graphene-like units.

18.
ACS Appl Mater Interfaces ; 12(13): 15595-15605, 2020 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-32157869

RESUMO

Metal-organic frameworks (MOFs) attract a rapidly growing attention across the disciplines due to their multifarious pore structures and unique ability to selectively adsorb, store, and release various guest molecules. Pore structure characterization and coupling of adsorption and structural properties are imperative for rational design of advanced MOF materials and their applications. The pore structure of MOFs represents a three-dimensional network comprised of several types of pore compartments: interconnected cages and channels distinguished by their size, shape, and chemistry. Here, we propose a novel methodology for pore structure characterization of MOF materials based on matching of the experimental adsorption isotherms to in silico-generated fingerprint isotherms of adsorption in individual pore compartments of the ideal crystal. The proposed approach couples structural and adsorption properties, determines the contributions of different types of pores into the total adsorption, and estimates to what extent the pore structure of the sample under investigation is different from the ideal crystal. The MOF pore structure is characterized by the pore type distribution (PTD), which is more informative than the traditional pore size distribution that is based on oversimplistic pore models. The method is illustrated on the example of Ar adsorption at 87 K on hydrated and dehydrated structures of Cu-BTC, one of the most well-known MOF materials. The PTD determined from the experimental isotherm provides an estimate of the crystal fraction in the sample and the accessibility and degree of hydration of different types of pore compartments. In addition, the PTD determined from the experimental adsorption isotherm is used to predict the isosteric heat of adsorption that provides important information on the specifics of adsorption interactions. The results are found to be in excellent agreement with experimental data. Such detailed information about the pore structure and adsorption properties of practical MOF samples cannot be obtained with currently available methods of adsorption characterization.

19.
J Colloid Interface Sci ; 561: 58-70, 2020 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-31812867

RESUMO

Understanding the interactions between nanoparticles (NP) and lipid bilayers (LB), which constitute the foundations of cell membranes, is important for emerging biomedical technologies, as well as for assessing health threats related to nanoparticle commercialization. Applying dissipative particle dynamic simulations, we explore adhesion, intake, and release of hydrophobic nanoparticles by DMPC bilayers. To replicate experimental conditions, we develop a novel simulation setup for modeling membranes at isotension conditions. NP-LB interactions are quantified by the free energy landscape calculated by the ghost tweezers method. NPs are studied z of diameter 2 nm (comparable with the LB hydrophobic core), 4 nm (comparable with the LB thickness) and 8 nm (exceeding the LB thickness). NPs are pre-covered by an adsorbed lipid monolayer. It is shown that NP translocation across LB includes (1) NP intake into the hydrophobic core via merging of the monolayer adsorbed on NP with the outer leaflet of bilayer (2) NP release via formation and rupture of a lipid junction connecting NP and LB. Both stages are associated with free energy barriers. The barrier for the intake stage increases with the NP size and becomes prohibitively high for 8 nm NP. The barriers for the release stage are significantly higher which implies that the release stage controls the translocation rate and dynamics. The release energy barrier of 4 nm NP is found smaller than those for 2 and 8 nm NPs which implies the existence of the optimal NP size for unforced trans-membrane transport. Based on the calculated free energy landscape, the dynamics of unforced transport of NP across LB is evaluated using the Fokker-Planck equation, which mimics NP diffusion along the free energy landscape with multiple attempts to reach the barrier. We found that the number of attempts required for successful translocation scales exponentially with the energy barrier.


Assuntos
Membrana Celular/metabolismo , Ouro/química , Bicamadas Lipídicas/metabolismo , Nanopartículas Metálicas/química , Adesividade , Adsorção , Membrana Celular/química , Difusão , Humanos , Interações Hidrofóbicas e Hidrofílicas , Bicamadas Lipídicas/química , Simulação de Dinâmica Molecular
20.
Langmuir ; 35(35): 11590-11600, 2019 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-31379170

RESUMO

Adsorption-induced deformation of a series of silica samples with hierarchical porosity has been studied by in situ small-angle neutron scattering (SANS) and in situ dilatometry. Monolithic samples consisted of a disordered macroporous network of struts formed by a 2D lattice of hexagonally ordered cylindrical mesopores and disordered micropores within the mesopore walls. Strain isotherms were obtained at the mesopore level by analyzing the shift of the Bragg reflections from the ordered mesopore lattice in SANS data. Thus, SANS essentially measured the radial strain of the cylindrical mesopores including the volume changes of the mesopore walls due to micropore deformation. A H2O/D2O adsorbate with net zero coherent neutron scattering length density was employed in order to avoid apparent strain effects due to intensity changes during pore filling. In contrast to SANS, the strain isotherms obtained from in situ dilatometry result from a combination of axial and radial mesopore deformation together with micropore deformation. Strain data were quantitatively analyzed with a theoretical model for micro-/mesopore deformation by combining information from nitrogen and water adsorption isotherms to estimate the water-silica interaction. It was shown that in situ SANS provides complementary information to dilatometry and allows for a quantitative estimate of the elastic properties of the mesopore walls from water adsorption.

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