Different land use types influence Red-browed Amazon (Amazona rhodocorytha) ccurrence in Southeastern Brazil.

The habitat loss is the main threat for many parrot species worldwide. However, the disturbed environments can influence the occurrence of the species positively or negatively, depending on its structure and potential use as an alternative environment. Therefore, this work aims to determine the relationship between land use types and the occurrence of the threatened Red-browed Amazon, identifying the land use types related to species' occurrence and the direction of these relationships. Seven land use types were significantly associated with the species' occurrence: Primary/Secondary Advanced/Medium Natural Forest, Secondary Natural Vegetation, Pasture, Outcrop/Bare Soil, Mangroves, Rivers and Urban Areas. We found that some land use types that are structurally different from the original environments (Pasture, Outcrop/Bare Soil and Urban Areas) positively affected the occurrence of the species. The relationship between intensity of occurrence and highly anthropized land use types, suggests a plasticity of the species in habitat use that may be contributing to the maintenance of Red-browed Amazon populations in highly disturbed habitats. Therefore, we proposed that the management of disturbed areas, along with usual conservation strategies (e.g., conservation of forest remnants, restoration of degraded areas), could contribute to Red-browed Amazon conservation.

How do bat, rodent, and marsupial communities respond to spatial and environmental gradients? Insights from a deconstruction of mammal beta diversity from the Atlantic Forest of South America.

Space and environment are fundamental in influencing the community structure. However, their relative influences vary according to species' biological characteristics. Here we test whether differences in life-history traits mainly linked to dispersal abilities influence bat, rodent and marsupial beta diversity along spatial and environmental gradients. We expect bat beta diversity to be weakly related with space in comparison to dispersal-limited rodents and marsupials. Using data from communities distributed along the Atlantic Forest of South America, we calculated the total beta diversity and its turnover and nestedness components for each group. We estimated the strength of correlation of beta diversity and its components along spatial and environmental gradients, comparing their importance within and between groups. Space had the higher influence on rodent and marsupial beta diversity. For bats, both gradients influenced similarly their community composition. Between taxa, the influence of these gradients did not differ for rodents and marsupials, while bats presented a stronger relationship with environment compared to non-volant small mammals. Also, all groups presented a similar influence of the spatial gradients on their community structure, despite their differences in dispersal abilities. Our results suggest that differences in biological characteristics partially influence the community structure of these mammals, with their responses along space likely reflecting similar biogeographical dynamics affecting their distribution. Overall, our results improve the understanding of the processes structuring these communities, highlighting the benefits of comparative analyses within a beta diversity perspective to better understand the influence of multiple processes on the community assembly along geographical gradients.

ATLANTIC MAMMAL TRAITS: a data set of morphological traits of mammals in the Atlantic Forest of South America.

Measures of traits are the basis of functional biological diversity. Numerous works consider mean species-level measures of traits while ignoring individual variance within species. However, there is a large amount of variation within species and it is increasingly apparent that it is important to consider trait variation not only between species, but also within species. Mammals are an interesting group for investigating trait-based approaches because they play diverse and important ecological functions (e.g., pollination, seed dispersal, predation, grazing) that are correlated with functional traits. Here we compile a data set comprising morphological and life history information of 279 mammal species from 39,850 individuals of 388 populations ranging from -5.83 to -29.75 decimal degrees of latitude and -34.82 to -56.73 decimal degrees of longitude in the Atlantic forest of South America. We present trait information from 16,840 individuals of 181 species of non-volant mammals (Rodentia, Didelphimorphia, Carnivora, Primates, Cingulata, Artiodactyla, Pilosa, Lagomorpha, Perissodactyla) and from 23,010 individuals of 98 species of volant mammals (Chiroptera). The traits reported include body mass, age, sex, reproductive stage, as well as the geographic coordinates of sampling for all taxa. Moreover, we gathered information on forearm length for bats and body length and tail length for rodents and marsupials. No copyright restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications. We also request that researchers and teachers inform us of how they are using the data.

ATLANTIC BATS: a data set of bat communities from the Atlantic Forests of South America.

Bats are the second most diverse mammal order and they provide vital ecosystem functions (e.g., pollination, seed dispersal, and nutrient flux in caves) and services (e.g., crop pest suppression). Bats are also important vectors of infectious diseases, harboring more than 100 different virus types. In the present study, we compiled information on bat communities from the Atlantic Forests of South America, a species-rich biome that is highly threatened by habitat loss and fragmentation. The ATLANTIC BATS data set comprises 135 quantitative studies carried out in 205 sites, which cover most vegetation types of the tropical and subtropical Atlantic Forest: dense ombrophilous forest, mixed ombrophilous forest, semideciduous forest, deciduous forest, savanna, steppe, and open ombrophilous forest. The data set includes information on more than 90,000 captures of 98 bat species of eight families. Species richness averaged 12.1 per site, with a median value of 10 species (ranging from 1 to 53 species). Six species occurred in more than 50% of the communities: Artibeus lituratus, Carollia perspicillata, Sturnira lilium, Artibeus fimbriatus, Glossophaga soricina, and Platyrrhinus lineatus. The number of captures divided by sampling effort, a proxy for abundance, varied from 0.000001 to 0.77 individuals·h-1 ·m-2 (0.04 ± 0.007 individuals·h-1 ·m-2 ). Our data set reveals a hyper-dominance of eight species that together that comprise 80% of all captures: Platyrrhinus lineatus (2.3%), Molossus molossus (2.8%), Artibeus obscurus (3.4%), Artibeus planirostris (5.2%), Artibeus fimbriatus (7%), Sturnira lilium (14.5%), Carollia perspicillata (15.6%), and Artibeus lituratus (29.2%).

New records on the use of man-made constructions as diurnal roosts by bats from the southern Amazon in central Brazil / Novos registros sobre a utilização de construções humanas como abrigos diurnos por morcegos no sul da Amazônia Brasileira

Roosts are a key part of bat species' life stories. Information on roost use enables us to understand the biological processes underlying bat ecology and is crucial with regard to the natural-roost loss and environmental pressures related to habitat destruction that has been considered as a threat affecting bat conservation. The aim of this study was to collect new data on the diurnal artificial-roost use by bats in a landscape from the southern Amazon. We observed bat species roosting at an abandoned house in a highly fragmented ecotone between the Amazon and Cerrado biomes. We observed one Trachops cirrhosus individual roosting in physical contact with one Phyllostomus hastatus. One year later, we noticed a compositional change at this roost, in which we found a large colony of Pteronotus parnellii. These findings may shed light on the potential flexibility of the roosting requirements of these species in such landscapes. Moreover, this is one of the first records of the use of human constructions by P. parnelli in such fragmented landscapes, a bat species that until recently was thought of as being associated only with well-preserved natural roosts.

Abrigos desempenham um papel importante na história de vida dos morcegos. Informações sobre sua utilização possibilitam a compreensão dos processos biológicos associados à sua ecologia e são cruciais considerando que a perda de abrigos naturais e que as pressões ambientais relacionadas à descaracterização dos ecossistemas são ameaças para a conservação deste grupo. O objetivo desde estudo foi coletar novos dados sobre a utilização diurna de abrigos artificiais por espécies morcegos em uma região ao sul da Amazônia. Nós observamos espécies de morcegos abrigando uma casa abandonada em uma região ecotonal entre os biomas Amazônia e Cerrado. Neste local, observamos um indivíduo de Trachops cirrhosus em contato físico com um indivíduo de Phyllostomus hastatus. Após um ano, observamos uma mudança neste abrigo, no qual uma colônia de Pteronotus parnellii foi observada. Estes registros podem lançar luz sobre a possível plasticidade destas espécies com relação às suas necessidades para a utilização de abrigos nestas paisagens. O registro trazido aqui é um dos primeiros sobre a utilização de construções humanas por P. parnellii, uma espécie comumente associada a abrigos naturais e bem preservados.

Ovarian cycle of southern brown howler monkey (Alouatta guariba clamitans) through fecal progestin measurement.

The ovarian cycle in howler monkeys (genus Alouatta) has beean investigated through several biological parameters (ranging between 16.3 and 29.5 days); however, no data exist concerning the ovarian activity of the southern brown howler monkey (Alouatta guariba clamitans). This study aimed to describe the ovarian cycle of A. g. clamitans by profiling fecal progestin concentrations. Over 20 weeks, fecal samples of eight captive adult females of A. g. clamitans were collected. The collections were made at dawn, 5 days a week, and the samples were frozen immediately following collection. Next, they were dried, pulverized and hormonal metabolites were extracted to determine progestin concentrations by enzyme immunoassay. Of the 758 samples tested, the mean concentration of fecal progestins was 2866.40 ± 470.03 ng/g of dry feces, while the mean concentration at baseline was 814.47 ± 164.36 ng/g of dry feces. Among the eight females, one showed no ovarian cyclicity and three presented periods of probable absence of cyclicity and low progestin concentrations. A mean duration of 16 ± 0.52 days was observed for the 35 cycles studied. The interluteal phase lasted 4 ± 0.37 days on average, with a mean concentration of fecal progestins of 467.98 ± 29.12 ng/g of dry feces, while the luteal phase lasted 11 ± 0.50 days, with a mean concentration of 4283.27 ± 193.31 ng/g of dry feces. Besides describing the characteristics of the ovarian cycle, possible causes for the low concentrations of fecal progestins and periods of absence of cyclicity are also discussed.

Assessing the exposure of lion tamarins (Leontopithecus spp.) to future climate change.

Understanding how biodiversity will respond to climate change is a major challenge in conservation science. Climatic changes are likely to impose serious threats to many organisms, especially those with narrow distribution ranges, small populations and low dispersal capacity. Lion tamarins (Leontopithecus spp.) are endangered primates endemic to Brazilian Atlantic Forest (BAF), and all four living species are typical examples of these aggravating conditions. Here, we integrate ecological niche modeling and GIS-based information about BAF remnants and protected areas to estimate the exposure (i.e., the extent of climate change predicted to be experienced by a species) of current suitable habitats to climate change for 2050 and 2080, and to evaluate the efficacy of existing reserves to protect climatically suitable areas. Niche models were built using Maxent and then projected onto seven global circulation models derived from the A1B climatic scenario. According to our projections, the occurrence area of L. caissara will be little exposed to climate change. Western populations of L. chrysomelas could be potentially exposed, while climatically suitable habitats will be maintained only in part of the eastern region. Protected areas that presently harbor large populations of L. chrysopygus and L. rosalia will not retain climatic suitability by 2080. Monitoring trends of exposed populations and protecting areas predicted to hold suitable conditions should be prioritized. Given the potential exposure of key lion tamarin populations, we stress the importance of conducting additional studies to assess other aspects of their vulnerability (i.e., sensitivity to climate and adaptive capacity) and, therefore, to provide a more solid framework for future management decisions in the context of climate change.

Group size and composition of black-and-gold howler monkeys (Alouatta caraya) on the Upper Paraná River, Southern Brazil.

In social mammals, group size, sex and age-class composition are important parameters that are required to understand population dynamics and determine conservation strategies. These parameters are known only poorly for the black-and-gold howler monkey (Alouatta caraya). Here, we studied groups of A. caraya on islands and adjacent banks of the Upper Paraná River of southern Brazil, to examine variability in group size and composition. This location is important for this species because of the high density of howlers. Group size was large, varying from 6 to 18 individuals (average = 11.5, standard deviation = 3.3, n = 13). Groups were multi-male, and adult females outnumbered adult males. On average, groups had the following ratios: 1 adult male: 0.5 subadult male: 1.9 adult females: 0.9 juveniles: 0.5 infants. The ratio of 0.2 infant: 1 adult female is less than that in other species, but typical of other studies of the black-and-gold howlers. Here, we discuss environmental and social pressures that may impose structure on large groups of howlers in terms of strategies for living in high densities. We also compare these data with those of the area of sympatry shared between A. caraya and A. clamitans, and suggest that competition may occur between the two species and that reduced fitness may be a consequence of mixed groups.

Wild mixed groups of howler species (Alouatta caraya and Alouatta clamitans) and new evidence for their hybridization.

Mixed species groups and hybridization are common among primates, yet these phenomena are rare and poorly understood for the genus Alouatta. In this study, we describe the composition of howler groups in a sympatric area of Alouatta caraya and Alouatta clamitans and provide new evidence for the occurrence of interspecific hybridization. Between October 2006 and April 2007, 11 howler groups were located in a 150-ha forest fragment: two monospecific groups of A. caraya, two monospecific groups of A. clamitans, two groups composed of A. clamitans and hybrid morphotypes (A. caraya x A. clamitans), and five groups composed of both species together with hybrid morphotypes (mixed species groups). The average size of the studied groups was 5.2 +/- 1.2 individuals. Monospecific and mixed groups (mixed species groups + groups with hybrids) did not differ significantly in their sizes. In total, the sex/age ratios were 1 AM:1.5 AF:0.2 SAM:0.5 JUV:0.2 INF and the species ratios were 1 A. caraya:1.6 A. clamitans:0.4 A. caraya x A. clamitans. The ratio of immatures to 1AF was larger in the monospecific groups (0.75 immatures:1AF) than in mixed groups (0.29 immatures:1AF), possibly reflecting a lower viability in the latter. Two features of the hybrid morphotypes of the upper Paraná River support their status as true hybrids: the polymorphism of their coloration patterns and the extremely female-biased sex ratio. The effects of Haldane's rule and population fragmentation on the interactions between both species are discussed.

Mother-offspring associations in northern muriquis, Brachyteles hypoxanthus.

Maternal care of offspring is ubiquitous among primates, but its duration varies across species due to factors such as dispersal patterns and social dynamics, which influence opportunities for and potential benefits of maternal investment in older offspring, respectively. We examined mother-offspring associations in wild northern muriquis (Brachyteles hypoxanthus), in which males are philopatric, females typically disperse before puberty, and social relationships among and between males and females are egalitarian. Associations were systematically recorded between ten mothers, each with two-six offspring in the study group, and all group members from August 2003-May 2004 at the RPPN-Feliciano Miguel Abdala in Minas Gerais, Brazil. Infants of both sexes received similarly high percentages of their mothers' association time. Mothers without infants also maintained strong associations with their youngest juvenile sons. Mothers did not spend consistently more time associating with either juvenile or adult sons than daughters. Our finding of non-preferential associations between muriqui mothers and their older male offspring suggests that extended maternal investment in offspring may be of minimal value in their egalitarian society compared with its value for species living in hierarchical societies.

Paracoccidioidomycosis in wild monkeys from Paraná State, Brazil.

The aim of this study was to evaluate the seroprevalence of Paracoccidioides brasiliensis infection in wild New World monkeys (Cebus sp. and Alouatta caraya). A total of 93 animals (Cebus sp., n = 68 and Alouatta caraya, n = 25) were captured in the Paraná River basin, Paraná State, Brazil and the serum samples were analyzed by ELISA and immunodiffusion using P. brasiliensis gp43 and exoantigen as antigens, respectively. The seropositivity observed by ELISA was 44.1% and 60% for Cebus sp. and A. caraya, respectively, while by immunodiffusion test Cebus sp. showed positivity of 2.9% only. No significant difference was observed in relation to age and sex. This is the first report of paracoccidioidomycosis in wild capuchin monkeys and in wild-black and golden-howler monkeys. The high positivity to P. brasiliensis infection in both species evaluated in our study and the positivity by immunodiffusion test in Cebus sp. suggest that natural disease may be occurring in wild monkeys living in paracoccidioidomycosis endemic areas.

Sympatry between Alouatta caraya and Alouatta clamitans and the rediscovery of free-ranging potential hybrids in Southern Brazil.

Records of sympatry between Alouatta caraya and A. clamitans are rare despite their extensive range overlap. An example of their current sympatry and the rediscovery of free-ranging potential hybrids of A. caraya and A. clamitans in the forests of the Upper Paraná River, Southern Brazil, are reported in this paper. Eight groups were observed in the study area: five monospecific groups of A. caraya, two of A. clamitans, and a group containing two adult males and two adult females of A. caraya and a sub-adult male and two adult females identified as Alouatta sp. The color of the last three individuals was a mosaic between the two species; this is consistent with previously described variations in museum specimens collected in the Paraná River in the 1940s that had been identified as potential hybrids. The results from this study emphasize the need for scientific studies in the region of the Ilha Grande National Park, one of the few regions in the Paraná River that currently harbors both howler species.

Use of traps to capture black and gold howlers (Alouatta caraya) on the Islands of the upper Paraná River, Southern Brazil.

Howlers (genus Alouatta) are widely captured with the use of anesthetic projectiles; however, no capture protocol involving the use of traps has been described to date. In the present study we describe the first efficient capture program for black and gold howlers (Alouatta caraya) using traps, which was implemented on the islands of the upper Paraná River in southern Brazil. We constructed two trap models with either manual or automatic activation (trap A with two entrances and guillotine-type doors; trap B with one entrance and a guillotine-type door). The traps were suspended in the canopy by means of vertical climbing techniques, and were baited regularly and abundantly with bananas and mangoes. We captured 70 howlers (86% using manual activation and 14% using automatic activation) on four different islands. We restrained 41 of these animals and measured their body mass, which averaged 5.30 kg+/-1.79. Given our results, we suggest that the system described in the present study represents an alternative capture program for howlers in areas that have low food diversity and no other mammal species that will compete for the bait, as has been observed in riparian environments, islands, and forest fragments.