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1.
Ind Eng Chem Res ; 61(29): 10496-10510, 2022 Jul 27.
Artigo em Inglês | MEDLINE | ID: mdl-35938051

RESUMO

This research discusses the CO2 valorization via hydrogenation over the non-noble metal clusters of Ni and Cu supported on graphitic carbon nitride (g-C3N4). The Ni and Cu catalysts were characterized by conventional techniques including XRD, AFM, ATR, Raman imaging, and TPR and were tested via the hydrogenation of CO2 at 1 bar. The transition-metal-based catalyst designed with atom-economy principles presents stable activity and good conversions for the studied processes. At 1 bar, the rise in operating temperature during CO2 hydrogenation increases the CO2 conversion and the selectivity for CO and decreases the selectivity for methanol on Cu/CN catalysts. For the Ni/CN catalyst, the selectivity to light hydrocarbons, such as CH4, also increased with rising temperature. At 623 K, the conversion attained ca. 20%, with CH4 being the primary product of the reaction (CH4 yield >80%). Above 700 K, the Ni/CN activity increases, reaching almost equilibrium values, although the Ni loading in Ni/CN is lower by more than 90% compared to the reference NiREF catalyst. The presented data offer a better understanding of the effect of the transition metals' small metal cluster and their coordination and stabilization within g-C3N4, contributing to the rational hybrid catalyst design with a less-toxic impact on the environment and health. Bare g-C3N4 is shown as a good support candidate for atom-economy-designed catalysts for hydrogenation application. In addition, cytotoxicity to the keratinocyte human HaCaT cell line revealed that low concentrations of catalysts particles (to 6.25 µg mL-1) did not cause degenerative changes.

2.
Vaccines (Basel) ; 10(5)2022 May 10.
Artigo em Inglês | MEDLINE | ID: mdl-35632506

RESUMO

Poland's efforts to combat COVID-19 were hindered by endemic vaccination hesitancy and the prevalence of opponents to pandemic restrictions. In this environment, the policy of a COVID-19 vaccination mandate faces strong resistance in the public debate. Exploring the discourse around this resistance could help uncover the motives and develop an understanding of vaccination hesitancy in Poland. This paper aims to conduct a social network analysis and content analysis of Twitter discussions around the intention of the Polish Ministry of Health to introduce mandatory vaccinations for COVID-19. Twitter was chosen as a platform to study because of the critical role it played during the global health crisis. Twitter data were retrieved from 26 July to 9 December 2021 through the API v2 for Academic Research, and analysed using NodeXL and Gephi. When conducting social network analysis, nodes were ranked by their betweenness centrality. Clustering analysis with the Clauset-Newman-Moore algorithm revealed two important groups of users: advocates and opponents of mandatory vaccination. The temporal trends of tweets, the most used hashtags, the sentiment expressed in the most popular tweets, and correlations with epidemiological data were also studied. The results reveal a substantial degree of polarisation, a high intensity of the discussion, and a high degree of involvement of Twitter users. Vaccination mandate advocates were consistently more numerous, but less engaged and less mobilised to "preach" their own stances. Vaccination mandate opponents were vocal and more mobilised to participate: either as original authors or as information diffusers. Our research leads to the conclusion that systematic monitoring of the public debate on vaccines is essential not only in counteracting misinformation, but also in crafting evidence-based as well as emotionally motivating narratives.

3.
Int J Biol Macromol ; 200: 520-531, 2022 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-35074328

RESUMO

Disruption of the neuronal membrane by toxic amyloid ß oligomers is hypothesized to be the major event associated with Alzheimer's disease's neurotoxicity. Misfolding of amyloid ß is followed by aggregation via different pathways in which structurally different amyloid ß oligomers can be formed. The respective toxic actions of these structurally diverse oligomers can vary significantly. Linking a particular toxic action to a structurally unique kind of amyloid ß oligomers and resolving their toxicity-determining feature remains challenging because of their transient stability and heterogeneity. Moreover, the lipids that make up the membrane affect amyloid ß oligomers' behavior, thus adding to the problem's complexity. The present review compares and analyzes the latest results to improve understanding of amyloid ß oligomers' interaction with lipid bilayers.


Assuntos
Peptídeos beta-Amiloides
4.
Methods Mol Biol ; 2402: 227-241, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-34854048

RESUMO

Protein misfolding diseases, like Alzheimer's, Parkinson's, and Huntington's disease, are associated with misfolded protein aggregation. Alzheimer's disease is related to a progressive neuronal death induced by small amyloid ß oligomers. Here, we describe the procedure to prepare and identify different types of small toxic amyloid ß oligomers by atomic force microscopy (AFM).


Assuntos
Microscopia de Força Atômica , Doença de Alzheimer , Amiloide , Peptídeos beta-Amiloides/toxicidade , Humanos
5.
Entropy (Basel) ; 23(11)2021 Oct 24.
Artigo em Inglês | MEDLINE | ID: mdl-34828089

RESUMO

The domain of policymaking, which used to be limited to small groups of specialists, is now increasingly opening up to the participation of wide collectives, which are not only influencing government decisions, but also enhancing citizen engagement and transparency, improving service delivery and gathering the distributed wisdom of diverse participants. Although collective intelligence has become a more common approach to policymaking, the studies on this subject have not been conducted in a systematic way. Nevertheless, we hypothesized that methods and strategies specific to different types of studies in this field could be identified and analyzed. Based on a systematic literature review, as well as qualitative and statistical analyses, we identified 15 methods and revealed the dependencies between them. The review indicated the most popular approaches, and the underrepresented ones that can inspire future research.

6.
Bioelectrochemistry ; 141: 107842, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34049238

RESUMO

The only representative of cathelicidin peptides in humans is LL-37, a multifunctional antimicrobial peptide (AMP) that is a part of the innate immune response. Details of the LL-37 direct activity against pathogens are not well understood at the molecular level. Here, we present research on the mechanism of interaction between LL-37 and a model multicomponent bilayer lipid membrane (BLM), mimicking microbial cell membrane. Electrochemical impedance spectroscopy (EIS), high-resolution atomic force microscopy (AFM) imaging, and polarization-modulation infrared reflection-absorption spectroscopy (PM-IRRAS) were applied to study the peptide influence on a model microbial-like membrane. We show that LL-37 causes changes in the phospholipid molecules conformation and orientation, leading to membrane disintegration, significantly affecting the membrane electrical parameters, such as capacitance and resistance. High-resolution AFM imaging shows topographical and mechanical effects of such disintegration, while PM-IRRAS data indicates that introduction of LL-37 causes changes in the phospholipid acyl chains from all-trans to gauche conformations. Moreover, the presence of LL-37 significantly alters the value of the phospholipid tilt angle. Altogether, our results suggest a "carpet" membrane dissolution followed by a detergent-like membrane disruption mechanism upon LL-37 activity. This research gives a novel insight into the understanding of LL-37 influence on multicomponent model membranes and a promising contribution to the development of LL-37-derived therapeutic agents against drug-resistant bacteria.


Assuntos
Antibacterianos/química , Peptídeos Catiônicos Antimicrobianos/química , Bactérias/química , Bicamadas Lipídicas/química , Lipídeos de Membrana/química , Fosfolipídeos/química , Antibacterianos/farmacologia , Peptídeos Catiônicos Antimicrobianos/farmacologia , Bactérias/efeitos dos fármacos , Espectroscopia Dielétrica , Humanos , Testes de Sensibilidade Microbiana , Microscopia de Força Atômica , Catelicidinas
7.
ACS Chem Neurosci ; 12(3): 531-541, 2021 02 03.
Artigo em Inglês | MEDLINE | ID: mdl-33478212

RESUMO

Alzheimer's disease (AD) is characterized by progressive neurodegeneration associated with amyloid ß (Aß) peptide aggregation. The aggregation of Aß monomers (AßMs) leads to the formation of Aß oligomers (AßOs), the neurotoxic Aß form, capable of permeating the cell membrane. Here, we investigated the effect of a fluorene-based active drug candidate, named K162, on both Aß aggregation and AßO toxicity toward the bilayer lipid membrane (BLM). Electrochemical impedance spectroscopy (EIS), atomic force microscopy (AFM), and molecular dynamics (MD) were employed to show that K162 inhibits AßOs-induced BLM permeation, thus preserving BLM integrity. In the presence of K162, only shallow defects on the BLM surface were formed. Apparently, K162 modifies Aß aggregation by bypassing the formation of toxic AßOs, and only nontoxic AßMs, dimers (AßDs), and fibrils (AßFs) are produced. Unlike other Aß toxicity inhibitors, K162 preserves neurologically beneficial AßMs. This unique K162 inhibition mechanism provides an alternative AD therapeutic strategy that could be explored in the future.


Assuntos
Doença de Alzheimer , Peptídeos beta-Amiloides , Doença de Alzheimer/tratamento farmacológico , Amiloide , Peptídeos beta-Amiloides/toxicidade , Humanos , Lipídeos , Microscopia de Força Atômica , Simulação de Dinâmica Molecular , Fragmentos de Peptídeos
8.
Nanoscale Adv ; 3(5): 1342-1351, 2021 Mar 09.
Artigo em Inglês | MEDLINE | ID: mdl-36132874

RESUMO

The catalytic performance of metal nanoparticles (NPs), including activity, selectivity, and durability, depends on their shape and structure at the molecular level. Consequently, metal NPs of different size and shape, e.g., nanobelts, nanocubes, nanoflakes, and nanowires, demonstrate different reactivity and provide different reaction rates depending on the facet exposed. In this context, the present review aims to summarize the shape-structure-activity relation of metallic nanocatalysts. Moreover, keeping in mind that the application of noble metal catalysts is expensive, we would like to draw the reader's attention to bimetallic nanocatalysts supported on graphitic carbon nitride. One of the advantages of these systems is the possibility to minimize the use of noble metals by introducing another metal either to the parent NPs and/or modifying the support materials. The development and optimization of bimetallic nanocatalysts might provide the new class of materials with superior, tunable performance, thermal stability and reduced costs compared to presently available commercial catalysts. Therefore, further application of these bimetallic composites for sustainable development in energy, green chemicals/fuels and environmental protection will be discussed.

10.
Chemosphere ; 266: 128996, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-33288286

RESUMO

Nitroaromatics belong to the group of toxic components of aerosol particles and atmospheric hydrometeors that enter the atmosphere through biomass burning and fuel combustion. In the present work, we report on the cytotoxic effects of a 2-, 3- and 4-nitrophenol mixture on a model eukaryotic-like cell membrane and compared it with in vitro cellular models BEAS-2B (immortalized bronchial epithelial cells) and A549 (cancerous alveolar epithelial cells). A selected model biomembrane comprised of DMPC (1,2-dimyristoyl-sn-glycero-3-phosphocholine), DPPC (1,2-dipalmitoyl-sn-glycero-3-phosphocholine) and POPC (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine) was studied. The electrochemical-based method, combined with atomic force microscopy (AFM) and phase-contrast microscopy imaging, allowed to get insights into the mechanism of cellular function disruption caused by airborne nitrophenols. The efficacy of the method is supported by the data obtained from in vitro experiments performed on cell models. The nitrophenol mixture exhibited cytotoxic effects at concentrations above 100 µg mL-1, as demonstrated by phase-contrast microscopy in real lung cell lines. Electrochemical impedance spectroscopy (EIS) revealed the formation of membrane defects at a nitrophenol concentration of 200 µg mL-1. AFM imaging confirmed the model membrane disintegration and phospholipids rearrangement in the presence of nitrophenols. These observations indicate that particle-bound nitrophenols induce substantial changes in cell membranes and make them more permeable to aerosol, resulting in major cellular damage in the lungs when inhaled. The study provides initial evidence of cellular membrane damage induced by three important nitrated phenols present in the environment.


Assuntos
Células Eucarióticas , Bicamadas Lipídicas , Membrana Celular , Nitrofenóis/toxicidade , Fosfatidilcolinas , Fosfolipídeos
11.
ACS Omega ; 5(37): 23909-23918, 2020 Sep 22.
Artigo em Inglês | MEDLINE | ID: mdl-32984711

RESUMO

Stable polymeric materials with embedded nano-objects, retaining their specific properties, are indispensable for the development of nanotechnology. Here, a method to obtain Pt, Pd, Au, and Ag nanoparticles (ca. 10 nm, independent of the metal) by the reduction of their ions in pectin, in the absence of additional reducing agents, is described. Specific interactions between the pectin functional groups and nanoparticles were detected, and they depend on the metal. Bundles and protruding nanoparticles are present on the surface of nanoparticles/pectin films. These films, deposited on the electrode surface, exhibit electrochemical response, characteristic for a given metal. Their electrocatalytic activity toward the oxidation of a few exemplary organic molecules was demonstrated. In particular, a synergetic effect of simultaneously prepared Au and Pt nanoparticles in pectin films on glucose electro-oxidation was found.

12.
Nanoscale Adv ; 2(8): 3467-3480, 2020 Aug 11.
Artigo em Inglês | MEDLINE | ID: mdl-36134289

RESUMO

Neurodegeneration in Alzheimer's disease is associated with disruption of the neuronal cell membrane by the amyloid ß (Aß) peptide. However, the disruption mechanism and the resulting changes in membrane properties remain to be elucidated. To address this issue, herein the interaction of amyloid ß monomers (AßMs) and amyloid ß oligomers (AßOs) with a floating bilayer lipid membrane (fBLM) was studied using electrochemical and IR spectroscopy techniques. IR measurements showed that both Aß forms interacted similarly with the hydrophobic membrane core (lipid acyl chains), causing conformational and orientational changes of the lipid acyl chains, thus decreasing acyl chain mobility and altering the lipid packing unit cell. In the presence of AßOs, these changes were more significant than those in the presence of AßMs. However, respective interactions of AßMs and AßOs with the membrane hydrophilic exterior (lipid heads) were quite different. AßMs dehydrated lipid heads without affecting their orientation while AßOs changed the orientation of lipid heads keeping their hydration level intact. Electrochemical measurements showed that only AßOs porated the fBLM, thus significantly changing the fBLM electrical properties. The present results provide new molecular-level insight into the mechanism of membrane destruction by AßOs and changes in the membrane properties.

13.
Langmuir ; 35(36): 11940-11949, 2019 09 10.
Artigo em Inglês | MEDLINE | ID: mdl-31328526

RESUMO

Amyloid ß, Aß(1-42), is a component of senile plaques present in the brain of Alzheimer's disease patients and one of the main suspects responsible for pathological consequences of the disease. Herein, we directly visualize the Aß activity toward a brain-like model membrane and demonstrate that this activity strongly depends on the Aß oligomer size. PeakForce quantitative nanomechanical mapping mode of atomic force microscopy imaging revealed that the interaction of large-size (LS) Aß oligomers, corresponding to high-molecular-weight Aß oligomers, with the brain total lipid extract (BTLE) membrane resulted in accelerated Aß fibrillogenesis on the membrane surface. Importantly, the fibrillogenesis did not affect integrity of the membrane. In contrast, small-size (SS) Aß oligomers, corresponding to low-molecular-weight Aß oligomers, created pores and then disintegrated the BTLE membrane. Both forms of the Aß oligomers changed nanomechanical properties of the membrane by decreasing its Young's modulus by ∼45%. Our results demonstrated that both forms of Aß oligomers induce the neurotoxic effect on the brain cells but their action toward the membrane differs significantly.


Assuntos
Peptídeos beta-Amiloides/química , Encéfalo , Bicamadas Lipídicas/química , Peptídeos beta-Amiloides/metabolismo , Encéfalo/metabolismo , Bicamadas Lipídicas/isolamento & purificação , Bicamadas Lipídicas/metabolismo , Tamanho da Partícula , Propriedades de Superfície
14.
Langmuir ; 32(22): 5653-62, 2016 06 07.
Artigo em Inglês | MEDLINE | ID: mdl-27124645

RESUMO

The behavior, secondary structure, and orientation of a recently discovered bacteriocin-like peptide BacSp222 in a lipid model system supported at a gold electrode was investigated by chronocoulometry, polarization modulation infrared reflection absorption spectroscopy (PM-IRRAS), and attenuated total reflectance infrared (ATR-IR) spectroscopy. The IR spectra show that the secondary structure of BacSp222 is predominantly α-helical. Analysis of the spectra in the amide I region shows that the α-helical fragment of the peptide is inserted into bilayer at the potential range at which the bilayer is stable and attached to the Au(111) surface, i.e., from -0.5 to 0.3 V vs Ag/AgCl. Insertion of BacSp222 to the membrane significantly changes the conformation of the acyl chains of lipid molecules, from all-trans to partially melted; however, the chains become less tilted. Based on these results, we propose that BacSp222 interacts with the DMPC bilayer through the barrel-stave pore formation. In this model, α-helix of BacSp222 inserts into the membrane with an angle between the α-helix axis and membrane normal equal to ∼18°. The changes in orientation of the α-helical fragment of the peptide indicate that the orientation of BacSp222 with respect to the bilayer surface is potential-dependent. The peptide is inserted into the membrane driven by the electrostatic field generated by negative charge at the metal surface. It is not inserted at negative potentials where the membrane is detached from the metal and no longer exposed to the electrostatic field of the metal.


Assuntos
Bacteriocinas/química , Bicamadas Lipídicas/química , Fosfolipídeos/química , Estrutura Secundária de Proteína
15.
Sci Rep ; 5: 14569, 2015 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-26411997

RESUMO

Staphylococcus pseudintermedius is a common commensal bacterium colonizing the skin and mucosal surfaces of household animals. However, it has recently emerged as a dangerous opportunistic pathogen, comparable to S. aureus for humans. The epidemiological situation is further complicated by the increasing number of methicillin-resistant S. pseudintermedius infections and evidence of gene transmission driving antibiotic resistance between staphylococci colonizing human and zoonotic hosts. In the present study, we describe a unique peptide, BacSp222, that possesses features characteristic of both bacteriocins and virulence factors. BacSp222 is secreted in high quantities by S. pseudintermedius strain 222 isolated from dog skin lesions. This linear, fifty-amino-acid highly cationic peptide is plasmid-encoded and does not exhibit significant sequence similarities to any other known peptides or proteins. BacSp222 kills gram-positive bacteria (at doses ranging from 0.1 to several micromol/l) but also demonstrates significant cytotoxic activities towards eukaryotic cells at slightly higher concentrations. Moreover, at nanomolar concentrations, the peptide also possesses modulatory properties, efficiently enhancing interferon gamma-induced nitric oxide release in murine macrophage-like cell lines. BacSp222 appears to be one of the first examples of multifunctional peptides that breaks the convention of splitting bacteriocins and virulence factors into two unrelated groups.


Assuntos
Bacteriocinas/farmacologia , Peptídeos/farmacologia , Staphylococcus/metabolismo , Fatores de Virulência/farmacologia , Sequência de Aminoácidos , Animais , Bacteriocinas/química , Bacteriocinas/isolamento & purificação , Sequência de Bases , Linhagem Celular , Sobrevivência Celular/efeitos dos fármacos , Bactérias Gram-Positivas/efeitos dos fármacos , Humanos , Testes de Sensibilidade Microbiana , Dados de Sequência Molecular , Óxido Nítrico/biossíntese , Óxido Nítrico Sintase Tipo II/metabolismo , Peptídeos/química , Peptídeos/isolamento & purificação , Estabilidade Proteica , Alinhamento de Sequência , Staphylococcus/genética , Staphylococcus/patogenicidade , Fatores de Virulência/química , Fatores de Virulência/isolamento & purificação
16.
Anal Chim Acta ; 844: 61-9, 2014 Sep 24.
Artigo em Inglês | MEDLINE | ID: mdl-25172817

RESUMO

For molecular imprinting of oxidatively electroactive analytes by electropolymerization, we used herein reductively electroactive functional monomers. As a proof of concept, we applied C60 fullerene adducts as such for the first time. For that, we derivatized C60 to bear either an uracil or an amide, or a carboxy addend for recognition of the adenosine-5'-triphosphate (ATP) oxidizable analyte with the ATP-templated molecularly imprinted polymer (MIP-ATP). Accordingly, the ATP complex with all of the functional monomers formed in solution was potentiodynamically electropolymerized to deposit an MIP-ATP film either on an Au electrode of the quartz crystal resonator or on a Pt disk electrode for the piezoelectric microgravimetry (PM) or capacitive impedimetry (CI) determination of ATP, respectively, under the flow-injection analysis (FIA) conditions. The apparent imprinting factor for ATP was ∼4.0. After extraction of the ATP template, analytical performance of the resulting chemosensors, including detectability, sensitivity, and selectivity, was characterized. The limit of detection was 0.3 and 0.03mM ATP for the PM and CI chemosensor, respectively. The MIP-ATP film discriminated structural analogues of ATP quite well. The Langmuir, Freundlich, and Langmuir-Freundlich isotherms were fitted to the experimental data of the ATP sorption and sorption stability constants appeared to be nearly independent of the adopted sorption model.


Assuntos
Trifosfato de Adenosina/química , Fulerenos/química , Impressão Molecular , Polímeros/química
17.
Anal Chem ; 85(17): 8304-12, 2013 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-23885708

RESUMO

A 6-aminopurine (adenine) derivative of bis(2,2'-bithienyl)methane, vis., 4-[2-(6-amino-9H-purin-9-yl)ethoxy]phenyl-4-[bis(2,2'-bithienyl)methane] or Ade-BTM, was designed and synthesized for recognition of 5-fluorouracil (FU), an antitumor chemotherapy agent, by RNA-type (nucleobase pairing)-driven molecular imprinting. The prepolymerization complex stoichiometry involved one FU molecule and two molecules of the Ade-BTM functional monomer. Molecular structure of this complex was thermodynamically optimized via density functional theory at the B3LYP/3-21G* level. The stability constant of the FU-Ade-BTM complex of 1:2 stoichiometry was K = 2.17(±0.07) × 10(7) M(-2), as determined by titration with quenching of fluorescence of the bis(2,2'-bithienyl)methane moiety of Ade-BTM by the FU titrant, in benzonitrile, at 352 nm excitation. Next, (5-fluorouracil)-templated molecularly imprinted polymer (MIP-FU) films were deposited on indium-tin oxide (ITO) or Au film-coated glass slides, Pt disk electrodes, or 10-MHz quartz crystal resonators by potentiodynamic electropolymerization from solution of FU, Ade-BTM, and tris([2,2'-bithiophen]-5-yl)methane (TTM) cross-linking monomer at FU:Ade-BTM:TTM = 1:2:3 mol ratio. Then UV-visible and Fourier transform infrared (FT-IR) spectra of the MIP-FU films were recorded to confirm the FU template presence in the MIP-FU film and its subsequent release by extraction with methanol from this film. For determination of the stability constant of the complex of the MIP cavity and FU, piezoelectric microgravimetry (PM) under both batch- and flow-injection analysis conditions was used. For sensing application, three different transduction platforms [differential pulse voltammetry (DPV), capacitive impedimetry (CI), and PM] were integrated with the MIP-FU recognition unit. The limit of detection (LOD) was 56 nM, 75 nM, and 0.26 mM, for these chemosensors, respectively, indicating suitability of the former two for FU determination in blood plasma or serum (~500 nM). Moreover, the CI chemosensor was appreciably more sensitive to FU than to their common interferences.


Assuntos
Pareamento de Bases , Fluoruracila/análise , Impressão Molecular/métodos , Polímeros/química , RNA/análise , Pareamento de Bases/genética , RNA/genética
18.
Anal Chem ; 85(15): 7454-61, 2013 Aug 06.
Artigo em Inglês | MEDLINE | ID: mdl-23829162

RESUMO

A new conducting polymer of biotinylated bis(2,2'-bithien-5-yl)methane was prepared and applied as the recognition unit of two different biosensors for selective oligonucleotide determination using either electrochemical impedance spectroscopy (EIS) or piezoelectric microgravimetry (PM) for label-free analytical signal transduction. For preparation of this unit, first, a biotinylated bis(2,2'-bithien-5-yl)methane functional monomer was designed and synthesized. Then, this monomer was potentiodynamically polymerized to form films on the surface of a glassy carbon electrode (GCE) and a Au electrode of a quartz crystal resonator (QCR) for the EIS and PM transduction, respectively. On top of these films, neutravidin was irreversibly immobilized by complexing the biotin moieties of the polymer. Finally, recognizing biotinylated oligonucleotide was attached by complexing the surface-immobilized neutravidin. This layer-by-layer assembling of the poly(thiophene-biotin)-neutravidin-(biotin-oligonucleotide) recognition film served to determine the target oligonucleotide via complementary nucleobase pairing. Under optimized determination conditions, the target oligonucleotide limit of detection (LOD) was 0.5 pM and 50 nM for the EIS and PM transduction, respectively. The sensor response to the target oligonucleotide was linear with respect to logarithm of the target oligonucleotide concentration in a wide range of 0.5 pM to 30 µM and with respect to its concentration in the range of 50 to 600 nM for the EIS and PM transduction, respectively. The biosensors were appreciably selective with respect to the nucleobase mismatched oligonucleotides.


Assuntos
Técnicas Biossensoriais/métodos , Biotinilação , Condutividade Elétrica , Metano/química , Oligonucleotídeos/análise , Polímeros/química , Tiofenos/química , Avidina/química , Avidina/metabolismo , Técnicas Biossensoriais/instrumentação , Impedância Elétrica , Eletrodos , Proteínas Imobilizadas/química , Proteínas Imobilizadas/metabolismo , Modelos Moleculares , Conformação Molecular , Oligonucleotídeos/química , Oligonucleotídeos/metabolismo , Ausência de Peso
19.
Proc Natl Acad Sci U S A ; 109(52): 21223-7, 2012 Dec 26.
Artigo em Inglês | MEDLINE | ID: mdl-23236158

RESUMO

We present direct visualization of pores formed by alamethicin (Alm) in a matrix of phospholipids using electrochemical scanning tunneling microscopy (EC-STM). High-resolution EC-STM images show individual peptide molecules forming channels. The channels are not dispersed randomly in the monolayer but agglomerate forming 2D nanocrystals with a hexagonal lattice in which the average channel-channel distance is 1.90 ± 0.1 nm. The STM images suggest that each Alm is shared between the two adjacent channels. Every channel consists of six Alm molecules. Three or four of these molecules have the hydrophilic group oriented toward the center of the channel allowing for water column formation inside the channel. The dimensions of the central pore in the images are consistent with the dimension of the water column in a model of hexameric pore proposed in the literature. The images obtained in this work validate the barrel-stave model of the pore formed in phospholipid membranes by amphiphatic peptides. They also provide direct evidence for cluster formation by such pores.


Assuntos
Alameticina/química , Canais Iônicos/química , Fosfolipídeos/química , Animais , Dimiristoilfosfatidilcolina/química , Ouro/química , Microscopia de Tunelamento , Modelos Moleculares , Óvulo/química , Fosfatidilgliceróis/química , Pressão , Temperatura
20.
J Phys Chem B ; 113(19): 6682-91, 2009 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-19361175

RESUMO

Thin films of a new composite of an electroactive fullerene-based (C60-Pd) polymer and HiPCO single-wall carbon nanotubes, which were noncovalently modified by 1-pyrenebutiric acid (pyr-SWCNTs), were electrochemically prepared under multiscan cyclic voltammetry conditions. With respect to blank polymer, superior conductive, capacitive, and viscoelasitic properties of the composite were demonstrated. Composition of pyr-SWCNTs was determined by thermogravimetric analyses, which showed one molecule of 1-pyrenebutiric acid per approximately 20 carbon atoms of SWCNT. Atomic force microscopy imaging revealed that pyr-SWCNTs form tangles of pyr-SWCNTs bundles surrounded by globular clusters of the C60-Pd polymer. Peaks characteristic of both pyr-SWCNTs (radial breathing modes at approximately 200 to 300 cm(-1)) and C60-Pd polymer in the Raman spectra recorded for the composite confirmed the presence of pyr-SWCNTs in the composite film. The mass of the deposited film was in situ measured by piezoelectric microgravimetry with the use of an electrochemical quartz crystal microbalance (EQCM). Then, curves of the current, resonant frequency change, and dynamic resistance change versus the potential in different potential ranges were simultaneously recorded in a blank acetonitrile solution of tetrabutylammonium perchlorate. Specific capacitance, determined at -1.20 V for the composite as 90 F g(-1), was twice as high as that for the polymer. Electrochemical impedance spectroscopy was used to determine impedance parameters of both the C60-Pd polymer and C60-Pd/pyr-SWCNTs composite film. This data analysis indicated increased capacitance and decreased resistance for the new composite film.

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