Mechanics and remodelling of cell packings in epithelia.

Epithelia are sheets of cells that are dynamically remodelled by cell division and cell death during development. Here we describe the cell shapes and packings as networks of polygons: stable and stationary network configurations obey force balance and are represented as local minima of a potential function. We characterize the physical properties of this vertex model, including the set of ground states, and the energetics of topological rearrangements. We furthermore discuss a quasistatic description of cell division that allows us to study the mechanics and dynamics of tissue remodelling during growth. The biophysics of cells and their rearrangements can account for the morphology of cell packings observed in experiments.

Pyrene and chrysene fate in surface soil and sand microcosms.

Polycyclic aromatic hydrocarbons (PAHs) are major components of wastes from municipal gas plants and many wood preservatives. Soil contaminated with these wastes is a potential threat to human health because of the carcinogenicity of many PAHs. This study follows the fate of two four-ring PAHs, pyrene and chrysene, in three matrices: an adapted soil (obtained from a site contaminated with PAHs for more than 75 years), an uncontaminated soil (with and without an inoculum of adapted soil), and sand mixed with an inoculum of adapted soil. Radiolabeled pyrene, chrysene, and salicylic acid (a metabolite of PAH biodegradation) were used to trace the mineralization, transformation, extractability, and formation of an unextractable residual over time. Linear approximations of the rates of these processes were made. High-performance liquid chromatography (HPLC) analysis of extracts from inoculated soil showed the transient formation of two known metabolites: 1-hydroxypyrene (from pyrene) and 1-hydroxy-2-naphthoic acid (from chrysene). The amount of extractable label diminished steadily over the course of the study in systems that were not inhibited with sodium azide, whereas the amount of extractable label remained relatively constant in inhibited systems. Correspondingly, the amount of nonextractable residual label generally increased during each incubation in uninhibited systems, whereas the amount of this residual label remained relatively constant in inhibited systems. In contrast, the rate and extent of mineralization varied widely across matrix types. This suggests that alterations of the PAH that impact extractability and residual formation are common, in contrast to mineralization, which was apparently limited to adapted communities.