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1.
Thromb Res ; 176: 46-53, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30776687

RESUMO

BACKGROUND: Venous thromboembolism (VTE) has major clinical and public health impact. However, only sparse data on calendar time trends in incidence from unselected populations reflecting current clinical practice are available. OBJECTIVES: To examine temporal trends in the incidence and characteristics of patients hospitalized with first-time VTE in Denmark between 2006 and 2015. PATIENTS/METHODS: Using nationwide health care registries, we calculated yearly hospitalization rates for first-time VTE from 2006 to 2015. The rates were standardized to the age and sex distribution in 2006. Based on the hospitalization and prescription history of each patient, we assessed the risk profile and evaluated changes over time. RESULTS: We identified 67,426 patients with a first-time VTE hospitalization. The age- and sex-standardized incidence rate increased from 12.6 (95% CI: 12.3-12.9) per 10,000 person years at risk in 2006 to 15.1 (95% CI: 14.7-15.4) in 2015, corresponding to an increase of 19.8%. The increase was due to a 73.9% increase in the standardized incidence rate of pulmonary embolism (PE), whereas no increase was observed for deep vein thrombosis. The risk profile changed with an increasing proportion of elderly patients and patients with comorbidity (proportion of patients with a Charlson's Comorbidity Index score of ≥1). CONCLUSIONS: The hospitalization rate of first-time VTE, and particularly PE, has increased substantially within the last decade in Denmark. In addition, the risk profile of the VTE population has changed with more elderly and more patients with comorbidity being diagnosed. Further efforts are warranted to explore the changes in VTE epidemiology and the clinical implications.


Assuntos
Tromboembolia Venosa/epidemiologia , Adolescente , Adulto , Fatores Etários , Idoso , Idoso de 80 Anos ou mais , Dinamarca/epidemiologia , Feminino , Hospitalização , Humanos , Incidência , Masculino , Pessoa de Meia-Idade , Embolia Pulmonar/epidemiologia , Fatores de Risco , Adulto Jovem
2.
Transbound Emerg Dis ; 65(4): 1024-1032, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29457702

RESUMO

Since the introduction of African swine fever virus (ASFV) into the Baltic states and Poland in 2014, the disease has continued to spread within these regions. In 2017, the virus spread further west and the first cases of disease were reported in the Czech Republic and Romania, in wild boar and domestic pigs, respectively. To control further spread, knowledge of different modes of transmission, including indirect transmission via a contaminated environment, is crucial. Up until now, such an indirect mode of transmission has not been demonstrated. In this study, transmission via an environment contaminated with excretions from ASFV-infected pigs was investigated. Following euthanasia of pigs that were infected with an isolate of ASFV from Poland (POL/2015/Podlaskie/Lindholm), healthy pigs were introduced into the pens, in which the ASFV-infected pigs had been housed. Introduction was performed at 1, 3, 5 or 7 days, following euthanasia of the infected pig groups. Pigs, that were introduced into the contaminated environment after 1 day, developed clinical disease within 1 week, and both ASFV DNA and infectious virus were isolated from their blood. However, pigs introduced into the contaminated pens after 3, 5 or 7 days did not develop any signs of ASFV infection and no viral DNA was detected in blood samples obtained from these pigs within the following 3 weeks. Thus, it was shown that exposure of pigs to an environment contaminated with ASFV can result in infection. However, the time window for transmissibility of ASFV seems very limited, and, within our experimental system, there appears to be a rapid decrease in the infectivity of ASFV in the environment.


Assuntos
Vírus da Febre Suína Africana/fisiologia , Febre Suína Africana/transmissão , Monitoramento Ambiental , Doenças dos Suínos/transmissão , Febre Suína Africana/virologia , Vírus da Febre Suína Africana/isolamento & purificação , Animais , Anticorpos Antivirais/sangue , DNA Viral/genética , Ensaio de Imunoadsorção Enzimática/veterinária , Polônia/epidemiologia , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Sus scrofa/virologia , Suínos , Doenças dos Suínos/virologia , Fatores de Tempo
3.
Transbound Emerg Dis ; 64(5): 1380-1386, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-27161288

RESUMO

Outbreaks of porcine epidemic diarrhoea (PED) were reported across Europe during the 1980s and 1990s, but only sporadic outbreaks occurred in recent years. PED virus (PEDV) spread for the first time into the USA in 2013 and has caused severe economic losses. Retrospectively, it was found that two different strains of PEDV have been introduced into the United States, both are closely related to strains circulating in China where a new wave of the disease occurred from 2010 onwards. Since autumn 2014, new outbreaks of PED have occurred in Europe. In this study, weaned piglets were inoculated with an early European isolate (Br1/87) or faecal/intestinal suspensions derived from pigs infected with a recent European strain of PEDV (from Germany) or a US strain of PEDV. No evidence for infection resulted from inoculation of pigs with the German sample that contained high levels of PEDV RNA; there were no clinical signs, excretion of viral RNA or anti-PEDV antibody production. In contrast, all the pigs in the other two groups showed evidence of infection. Mild clinical signs of disease, mainly diarrhoea, occurred in piglets inoculated with the Br1/87 and US PEDV strains. PEDV RNA was detected throughout the intestine in euthanized animals at 4 days post-inoculation. In addition, within these animals, low levels of viral RNA were detected in lungs and livers with higher levels in spleens. Seroconversion against PEDV occurred in all surviving infected animals within 10 days. PEDV RNA excretion occurred for at least 2 weeks. The US PEDV RNA was detected at low levels in serum samples on multiple days. It is apparent that current diagnostic systems can detect infection by the different virus strains.


Assuntos
Infecções por Coronavirus/veterinária , Diarreia/veterinária , Vírus da Diarreia Epidêmica Suína/isolamento & purificação , Doenças dos Suínos/virologia , Animais , Infecções por Coronavirus/diagnóstico , Infecções por Coronavirus/virologia , Diarreia/diagnóstico , Diarreia/virologia , Fezes/virologia , Alemanha , Vírus da Diarreia Epidêmica Suína/genética , RNA Viral/sangue , Distribuição Aleatória , Soroconversão , Suínos , Doenças dos Suínos/diagnóstico , Estados Unidos , Desmame
4.
Transbound Emerg Dis ; 63(6): 595-601, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27619563

RESUMO

During a severe outbreak of diarrhoea and vomiting in a pig herd in Central Eastern Europe, faecal samples were tested positive for porcine epidemic diarrhoea virus (PEDV) and negative for transmissible gastroenteritis virus (TGEV) using a commercial RT-qPCR assay that can detect both of these coronaviruses. However, further analyses, using other TGEV- and PEDV-specific RT-qPCR assays, provided results inconsistent with infection by either of these viruses. Sequencing of an amplicon (ca. 1.6 kb), generated by an RT-PCR specific for the PEDV S-gene, indicated a very close similarity (ca. 99% identity) to recently described chimeric viruses termed swine enteric coronaviruses (SeCoVs). These viruses (with an RNA genome of ca. 28 kb) were first identified in Italy in samples from 2009 but have not been detected there since 2012. A closely related virus was detected in archived samples in Germany from 2012, but has not been detected subsequently. Building on the initial sequence data, further amplicons were generated and over 9 kb of sequence corresponding to the 3'-terminus of the new SeCoV genome was determined. Sequence comparisons showed that the three known SeCoVs are ≥98% identical across this region and contain the S-gene and 3a sequences from PEDV within a backbone of TGEV, but the viruses are clearly distinct from each other. It is demonstrated, for the first time, that pigs from within the SeCoV-infected herd seroconverted against PEDV but tested negative in a TGEV-specific ELISA that detects antibodies against the S protein. These results indicate that SeCoV is continuing to circulate in Europe and suggest it can cause a disease that is very similar to PED. Specific detection of the chimeric SeCoVs either requires development of a new diagnostic RT-qPCR assay or the combined use of assays targeting the PEDV S-gene and another part of the TGEV genome.


Assuntos
Infecções por Coronavirus/veterinária , Fezes/virologia , Gastroenterite Suína Transmissível/diagnóstico , Vírus da Diarreia Epidêmica Suína/genética , Vírus da Diarreia Epidêmica Suína/isolamento & purificação , Doenças dos Suínos/virologia , Animais , Ensaio de Imunoadsorção Enzimática , Europa (Continente) , Europa Oriental , Gastroenterite Suína Transmissível/virologia , Alemanha , Itália , Dados de Sequência Molecular , Reação em Cadeia da Polimerase em Tempo Real , Sus scrofa , Suínos , Vírus da Gastroenterite Transmissível/genética , Vírus da Gastroenterite Transmissível/isolamento & purificação
5.
Transbound Emerg Dis ; 62(1): 87-90, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23472656

RESUMO

The aim of the study was to assess whether blood samples collected onto FTA(®) cards could be used in combination with real-time PCR for the detection of African swine fever virus (ASFV) DNA in samples from resource-poor settings under the assumption that asymptomatically (sub-clinically) infected pigs may be present. Blood samples were collected from clinically healthy pigs from Mbeya Region, Tanzania. The blood samples were stored on FTA(®) cards and analysed by real-time PCR assays in duplicate; three pigs had high levels of viral DNA (Ct values of 27-29), and three pigs had a low level of viral DNA (Ct 36-45). Four pigs were positive in one of the duplicate samples only, but clear products of the expected size were obtained when the reactions were analysed by gel electrophoresis. For comparison, blood samples from pigs experimentally infected with either a pathogenic (OURT T88/1) or a non-pathogenic (OURT T88/3) isolate of ASFV were collected, stored on FTA(®) cards and analysed in the same way. The blood from pigs infected with the OURT T88/1 isolate showed high levels of viral DNA (Ct 22-33), whereas infection with non-pathogenic OURT T88/3 isolate resulted in only low levels of viral DNA (Ct 39) in samples collected at 10-14 days after inoculation.


Assuntos
Vírus da Febre Suína Africana/isolamento & purificação , Febre Suína Africana/diagnóstico , DNA Viral/sangue , Febre Suína Africana/epidemiologia , Vírus da Febre Suína Africana/genética , Animais , Coleta de Amostras Sanguíneas/veterinária , Primers do DNA/genética , DNA Viral/genética , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Especificidade da Espécie , Suínos , Tanzânia/epidemiologia
6.
Transbound Emerg Dis ; 61(1): 12-6, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24219171

RESUMO

Detection of Schmallenberg virus RNA, using real-time RT-PCR, in biting midges (Culicoides spp.) caught at 48 locations in 2011 and four well-separated farms during 2012 in Denmark, revealed a remarkably rapid spread of virus-infected midges across the country. During 2012, some 213 pools of obsoletus group midges (10 specimens per pool) were examined, and of these, 35 of the 174 parous pools were Schmallenberg virus RNA positive and 11 of them were positive in the heads. Culicoides species-specific PCRs identified both C. obsoletus and C. dewulfi as vectors of Schmallenberg virus.


Assuntos
Infecções por Bunyaviridae/veterinária , Ceratopogonidae/virologia , Insetos Vetores/virologia , Orthobunyavirus/isolamento & purificação , RNA Viral/genética , Animais , Infecções por Bunyaviridae/epidemiologia , Infecções por Bunyaviridae/transmissão , Infecções por Bunyaviridae/virologia , Dinamarca/epidemiologia , Orthobunyavirus/genética , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária , Especificidade da Espécie
7.
Vet Microbiol ; 165(1-2): 173-6, 2013 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-23398669

RESUMO

In 2011 African swine fever virus (ASFV) genome was detected in asymptomatic pigs in field samples in Mbeya, Tanzania. The aim of this paper is to partly characterize the virus that was harbored in these pigs and furthermore to confirm, by a second sampling, the latest occurrence of ASFV in the study area. ASFV genome was detected in serum from 10 out of 127 healthy European/crossbreed pigs. ASFV DNA was polymerase chain reaction (PCR) amplified and sequenced from sera with high viral loads using primers targeting p54 or p72. Both p54 and p72 had total identity to ASFV Genotype II (Georgia 2007/1). The ASFV epidemiology in Mbeya was studied in a new collection of 804 pig sera obtained in 2012. The antibody prevalence in four age groups (3-6 months.; 7-12 months; 13-18 months or 19-36 months) was 3-5%; all antibody positive sera were analyzed by PCR with negative results. The presence of antibodies in 3-month-old pigs confirms the circulation of ASFV in Mbeya several months after our detection of ASFV in asymptomatic pigs. The initial blood samples were obtained on Whatman FTA filter papers as dried blood samples. The samples were stored under field conditions and ASFV could be sequenced in DNA eluted 10 months later, showing the use of FTA samples. Studies on the genetic breed of the pigs are needed as well as sequence studies including the variable region of ASFV to elucidate why asymptomatic pigs with high viral loads were detected.


Assuntos
Vírus da Febre Suína Africana/genética , Febre Suína Africana/virologia , Suínos/virologia , Febre Suína Africana/epidemiologia , Febre Suína Africana/imunologia , Vírus da Febre Suína Africana/imunologia , Vírus da Febre Suína Africana/isolamento & purificação , Animais , Estudos Transversais , Primers do DNA/genética , Genótipo , República da Geórgia/epidemiologia , Reação em Cadeia da Polimerase , Tanzânia/epidemiologia
8.
Zoonoses Public Health ; 60(1): 22-34, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22963584

RESUMO

Rabies is the oldest known zoonotic disease and was also the first recognized bat associated infection in humans. To date, four different lyssavirus species are the causative agents of rabies in European bats: the European Bat Lyssaviruses type 1 and 2 (EBLV-1, EBLV-2), the recently discovered putative new lyssavirus species Bokeloh Bat Lyssavirus (BBLV) and the West Caucasian Bat Virus (WCBV). Unlike in the new world, bat rabies cases in Europe are comparatively less frequent, possibly as a result of varying intensity of surveillance. Thus, the objective was to provide an assessment of the bat rabies surveillance data in Europe, taking both reported data to the WHO Rabies Bulletin Europe and published results into account. In Europe, 959 bat rabies cases were reported to the RBE in the time period 1977-2010 with the vast majority characterized as EBLV-1, frequently isolated in the Netherlands, North Germany, Denmark, Poland and also in parts of France and Spain. Most EBLV-2 isolates originated from the United Kingdom (UK) and the Netherlands, and EBLV-2 was also detected in Germany, Finland and Switzerland. Thus far, only one isolate of BBLV was found in Germany. Published passive bat rabies surveillance comprised testing of 28 of the 52 different European bat species for rabies. EBLV-1 was isolated exclusively from Serotine bats (Eptesicus serotinus and Eptesicus isabellinus), while EBLV-2 was detected in 14 Daubenton's bats (Myotis daubentonii) and 5 Pond bats (Myotis dasycneme). A virus from a single Natterer's bat (Myotis nattereri) was characterized as BBLV. During active surveillance, only oral swabs from 2 Daubenton's bats (EBLV-2) and from several Eptesicus bats (EBLV-1) yielded virus positive RNA. Virus neutralizing antibodies against lyssaviruses were detected in various European bat species from different countries, and its value and implications are discussed.


Assuntos
Anticorpos Antivirais/sangue , Quirópteros/virologia , Lyssavirus/isolamento & purificação , Raiva/veterinária , Animais , Quirópteros/classificação , Reservatórios de Doenças , Monitoramento Epidemiológico , Europa (Continente)/epidemiologia , Imunofluorescência , Humanos , Lyssavirus/imunologia , Prevalência , RNA Viral/genética , Raiva/epidemiologia , Raiva/virologia , Especificidade da Espécie , Inquéritos e Questionários , Organização Mundial da Saúde
9.
Clin Genet ; 84(1): 20-30, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23137101

RESUMO

Mutations in the gene for desmoplakin (DSP) may cause arrhythmogenic right ventricular cardiomyopathy (ARVC) and Carvajal syndrome (CS). Desmoplakin is part of all desmosomes, which are abundantly expressed in both myocardial and epidermal tissue and serve as intercellular mechanical junctions. This study aimed to investigate protein expression in myocardial and epidermal tissue of ARVC and CS patients carrying DSP mutations in order to elucidate potential molecular disease mechanisms. Genetic investigations identified three ARVC patients carrying different heterozygous DSP mutations in addition to a homozygous DSP mutation in a CS patient. The protein expression of DSP in mutation carriers was evaluated in biopsies from myocardial and epidermal tissue by immunohistochemistry. Keratinocyte cultures were established from skin biopsies of mutation carriers and characterized by reverse transcriptase polymerase chain reaction, western blotting, and protein mass spectrometry. The results showed that the mutation carriers had abnormal DSP expression in both myocardial and epidermal tissue. The investigations revealed that the disease mechanisms varied accordingly to the specific types of DSP mutation identified and included haploinsufficiency, dominant-negative effects, or a combination hereof. Furthermore, the results suggest that the keratinocytes cultured from patients are a valuable and easily accessible resource to elucidate the effects of desmosomal gene mutations in humans.


Assuntos
Displasia Arritmogênica Ventricular Direita/genética , Cardiomiopatias/genética , Desmoplaquinas/genética , Expressão Gênica , Doenças do Cabelo/genética , Ceratodermia Palmar e Plantar/genética , Mutação , Miocárdio/metabolismo , Adulto , Displasia Arritmogênica Ventricular Direita/metabolismo , Displasia Arritmogênica Ventricular Direita/patologia , Cardiomiopatias/metabolismo , Cardiomiopatias/patologia , Cardiomiopatia Dilatada , Criança , Desmoplaquinas/metabolismo , Epiderme/metabolismo , Epiderme/patologia , Feminino , Doenças do Cabelo/metabolismo , Doenças do Cabelo/patologia , Haploinsuficiência , Heterozigoto , Homozigoto , Humanos , Queratinócitos/metabolismo , Queratinócitos/patologia , Ceratodermia Palmar e Plantar/metabolismo , Ceratodermia Palmar e Plantar/patologia , Pessoa de Meia-Idade , Miocárdio/patologia , Linhagem , Cultura Primária de Células , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo
10.
Neurology ; 76(14): 1245-51, 2011 Apr 05.
Artigo em Inglês | MEDLINE | ID: mdl-21464428

RESUMO

OBJECTIVE: To explore the onset and progression of cardiac involvement in juvenile neuronal ceroid lipofuscinosis (JNCL). METHODS: The study population comprised an unselected group of 29 children and adolescents with genetically verified JNCL. We focused on T-wave abnormalities on an EKG, cardiac hypertrophy, and left ventricular systolic function on echocardiography, and heart rates and heart rate variability (HRV) on 24-hour EKG recordings. The surviving patients were observed for 7½ years. The 24-hour EKG recording was repeated after 3 years. RESULTS: Abnormally deeply inverted T waves were present in one-third of the initial EKG recordings and were reported as early as 14 years of age. We found coherence between the presence of repolarization disturbances of the ventricular myocardium at the initial recordings and risk of death during the observation period. At increasing age, heart rate and HRV, expressed as the vagal index (number of adjacent RR intervals deviating more than 6%), were significantly reduced, suggesting an age-dependent bidirectional effect of JNCL on heart rate: one through decreasing parasympathetic activity on the heart and the other through a direct negative influence on sinus node automaticity. Coherence between bradycardia and arrhythmia and occurrence of sinus arrests and atrial flutter with increasing age indicated an age-dependent decrease in sinus node activity also. In the early 20s, a high frequency of ventricular hypertrophy occurred. CONCLUSIONS: Progressive cardiac involvement with repolarization disturbances, ventricular hypertrophy, and sinus node dysfunction occur in JNCL. We recommend that the attention on heart involvement in JNCL and other neuronal ceroid lipofuscinosis subtypes should be intensified.


Assuntos
Bradicardia/complicações , Bradicardia/diagnóstico , Frequência Cardíaca/fisiologia , Lipofuscinoses Ceroides Neuronais/complicações , Lipofuscinoses Ceroides Neuronais/diagnóstico , Adolescente , Adulto , Bradicardia/fisiopatologia , Criança , Eletrocardiografia/métodos , Feminino , Seguimentos , Humanos , Masculino , Lipofuscinoses Ceroides Neuronais/fisiopatologia , Adulto Jovem
11.
J Clin Microbiol ; 48(11): 3970-8, 2010 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-20739489

RESUMO

To improve the diagnosis of classical rabies virus with molecular methods, a validated, ready-to-use, real-time reverse transcription-PCR (RT-PCR) assay was developed. In a first step, primers and 6-carboxyfluorescien-labeled TaqMan probes specific for rabies virus were selected from the consensus sequence of the nucleoprotein gene of 203 different rabies virus sequences derived from GenBank. The selected primer-probe combination was highly specific and sensitive. During validation using a sample set of rabies virus strains from the virus archives of the Friedrich-Loeffler-Institut (FLI; Germany), the Veterinary Laboratories Agency (VLA; United Kingdom), and the DTU National Veterinary Institute (Lindholm, Denmark), covering the global diversity of rabies virus lineages, it was shown that both the newly developed assay and a previously described one had some detection failures. This was overcome by a combined assay that detected all samples as positive. In addition, the introduction of labeled positive controls (LPC) increased the diagnostic safety of the single as well as the combined assay. Based on the newly developed, alternative assay for the detection of rabies virus and the application of LPCs, an improved diagnostic sensitivity and reliability can be ascertained for postmortem and intra vitam real-time RT-PCR analyses in rabies reference laboratories.


Assuntos
Vírus da Raiva/isolamento & purificação , Raiva/diagnóstico , Raiva/veterinária , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Virologia/métodos , Animais , Primers do DNA/genética , Humanos , Sondas de Oligonucleotídeos/genética , Raiva/virologia , Vírus da Raiva/genética , Sensibilidade e Especificidade
12.
Vet Rec ; 166(23): 714-8, 2010 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-20525947

RESUMO

Following the first ever case of bluetongue in Denmark during late 2007, further outbreaks were observed in Denmark during 2008, despite vaccination against bluetongue virus (BTV) serotype 8 (BTV-8) in the southern part of the country. In total, 15 separate outbreaks of infection were identified, mostly as a result of clinical suspicions but also because of surveillance of bulk milk samples. These outbreaks led to extensions of the original vaccination zone planned for 2008. Blood samples from clinical suspects were analysed using ELISA and real-time RT-PCR assays for the presence of anti-BTV antibodies and viral RNA, respectively. A newly infected calf from the primary outbreak in 2008 was studied for a period of three months, during which time it seroconverted to BTV, but the presence of viral RNA in its blood was maintained throughout this time. Each outbreak was caused by BTV-8, as determined by a serotype-specific real-time RT-PCR assay. Furthermore, the nucleotide sequence of a portion of segment 2 of the viral RNA (encoding the outer capsid protein VP2) from the samples analysed was identical to the BTV-8 segment 2 that circulated in the Netherlands during 2006.


Assuntos
Vírus Bluetongue/classificação , Bluetongue/virologia , Doenças dos Bovinos/virologia , Animais , Anticorpos Anti-Idiotípicos/sangue , Anticorpos Antivirais/sangue , Sequência de Bases , Bluetongue/epidemiologia , Bluetongue/imunologia , Vírus Bluetongue/imunologia , Vírus Bluetongue/isolamento & purificação , Bovinos , Doenças dos Bovinos/epidemiologia , Doenças dos Bovinos/imunologia , Dinamarca/epidemiologia , Surtos de Doenças/veterinária , Ensaio de Imunoadsorção Enzimática , RNA Viral/sangue , RNA Viral/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Sorotipagem/veterinária , Ovinos , Vacinação/veterinária
13.
J Virol Methods ; 167(2): 165-71, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20380853

RESUMO

A real-time RT-PCR assay based on the primer-probe energy transfer (PriProET) was developed to detect all 24 serotypes of bluetongue virus (BTV). BTV causes serious disease, primarily in sheep, but in other ruminants as well. A distinguishing characteristic of the assay is its tolerance toward mutations in the probe region. Furthermore, melting curve analysis following immediately PCR confirms specific probe hybridization and can reveal mutations in the probe region by showing a difference in the melting point. The assay sensitivity was in the range of 10-100 target copies and the specificity tests showed no positive results for heterologous pathogens. The assay was tested on clinical samples from BTV 8 outbreaks in Sweden and Denmark in 2008. The lowest detection limit for that serotype, determined with PCR standards, was 57 genome copies. The assay sensitivity for some other serotypes that circulate currently in Europe was also determined. BTV 2, 4, 9 and 16 were tested on available cell culture samples and the detection limits were 109, 12, 13 and 24 copies, respectively. This assay provides an important tool for early and rapid detection of a wide range of BTV strains, including emerging strains.


Assuntos
Vírus Bluetongue/classificação , Vírus Bluetongue/genética , Bluetongue/diagnóstico , Primers do DNA/genética , Sondas de Oligonucleotídeos/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Animais , Bluetongue/virologia , Vírus Bluetongue/isolamento & purificação , Primers do DNA/química , Dinamarca/epidemiologia , Surtos de Doenças , Transferência de Energia , Genótipo , Mutação , Sondas de Oligonucleotídeos/química , Sensibilidade e Especificidade , Ovinos , Suécia/epidemiologia , Temperatura de Transição
14.
Transbound Emerg Dis ; 55(5-6): 215-25, 2008 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-18666965

RESUMO

Nine viral diseases included in the World Organization for Animal Health list of notifiable diseases (former list A) were chosen for their contagiousness and high capacity of spreading to improve their diagnosis using new and emerging technologies. All the selected diseases--foot-and-mouth disease, swine vesicular disease, vesicular stomatitis, classical swine fever, African swine fever, bluetongue, African horse sickness, Newcastle disease and highly pathogenic avian influenza--are considered as transboundary diseases, which detection causes the prohibition of livestock exportation, and, thus, it leads to high economical losses. The applied diagnostic techniques can fall into two categories: (i) nucleic-acid detection, including padlock probes, real-time PCR with TaqMan, minor groove binding probes and fluorescence energy transfer reaction probes, isothermal amplification like the Cleavase/Invader assay or the loop-mediated amplification technology and the development of rapid kits for 'mobile' PCR and (ii) antigen-antibody detection systems like simplified and more sensitive ELISA tests. Besides, internal controls have been improved for nucleic acid-detecting methods by using an RNA plant virus--Cowpea Mosaic Virus--to ensure the stability of the RNA used as a positive control in diagnostic real-time RT-PCR assays. The development of these diagnosis techniques has required the joint efforts of a European consortium in which nine diagnostic laboratories and an SME who have collaborated since 2004 within the European Union-funded Lab-on-site project. The results obtained are shown in this paper.


Assuntos
Técnicas de Laboratório Clínico/veterinária , Doenças Transmissíveis/veterinária , Notificação de Doenças , Viroses/veterinária , Animais , Técnicas de Laboratório Clínico/normas , Doenças Transmissíveis/diagnóstico , Ensaio de Imunoadsorção Enzimática/métodos , Ensaio de Imunoadsorção Enzimática/normas , Ensaio de Imunoadsorção Enzimática/veterinária , Reação em Cadeia da Polimerase/métodos , Reação em Cadeia da Polimerase/normas , Reação em Cadeia da Polimerase/veterinária , Sensibilidade e Especificidade , Viroses/diagnóstico
15.
J Appl Microbiol ; 102(3): 826-37, 2007 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-17309633

RESUMO

AIM: To investigate the potential of quorum sensing inhibitors (QSI) as food preservative agents in a food product, where bacterial spoilage is controlled by quorum sensing (QS). METHODS AND RESULTS: The effects of well-known QSI were tested on spoilage phenotypes and on QS-regulated genes of a bean sprout spoiling bacterial isolate (Pectobacterium A2JM) in laboratory substrates and in a bean sprout model system. The acylated homoserine lactones (AHL) analogues PenS-AHL and HepS-AHL decreased the specific protease activity of Pectobacterium A2JM in broth but did not reduce the expression of a QS-regulated secretion protein, and were without effect on soft rot of bean sprouts. The QSI ProS-AHL, furanone C-30, patulin, penicillic acid and 4-nitropyridine-N-oxide did not have any effect on protease activity, on gene expression or bean sprout appearance at nongrowth inhibitory concentrations. Extracts from garlic and bean sprouts induced the QS system of Pectobacterium in bean sprouts and a broth system, respectively. CONCLUSIONS: Among the several well-known QSI compounds, only PenS-AHL and HepS-AHL, inhibited QS-regulated protease activity of Pectobacterium A2JM in broth cultures, but had no effect on bean sprout spoilage. SIGNIFICANCE AND IMPACT OF THE STUDY: The QSI compounds must be selected in the specific system in which they are to function and they cannot easily be transferred from one QS system to another.


Assuntos
Microbiologia de Alimentos , Conservantes de Alimentos/farmacologia , Pectobacterium/efeitos dos fármacos , Phaseolus/microbiologia , Percepção de Quorum/efeitos dos fármacos , 4-Butirolactona/análogos & derivados , 4-Butirolactona/análise , 4-Butirolactona/farmacologia , Proteínas de Bactérias/genética , Óxidos N-Cíclicos/análise , Óxidos N-Cíclicos/farmacologia , Conservantes de Alimentos/análise , Furanos/análise , Furanos/farmacologia , Genes Bacterianos/genética , Mutação , Patulina/análise , Patulina/farmacologia , Pectobacterium/genética , Pectobacterium/crescimento & desenvolvimento , Ácido Penicílico/análise , Ácido Penicílico/farmacologia , Fenótipo , Percepção de Quorum/genética , Proteínas Repressoras/genética , Transativadores/genética , Fatores de Transcrição/genética
16.
Arch Virol ; 151(12): 2377-87, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-16835699

RESUMO

This study investigates the transmission of bovine viral diarrhoea virus (BVDV) 1f from a persistently infected (PI) lesser Malayan mousedeer to two bovine calves. Different contact routes to two calves were analysed: 1) aerosol contact between two adjacent pens without physical contact; 2) indirect contact by use of common utensils; 3) direct nose-to-nose contact for 30 seconds. One of the calves was infected either by aerosol or indirect contact. The virus sequence in 247 nucleotides in the 5'-UTR was 100% identical in mousedeer and calf. To elucidate the distribution of BVDV within the affected mousedeer family the captive population in a Zoo was analysed. The maternal line of PI animals was maintained, whereas a PI male was able to reproduce and have a non-PI calf. As a consequence of this, six female PI mousedeer were killed; subsequent autopsies did not reveal any lesions. Sequencing mousedeer BVD virus in the E2 region (420 nucleotides) through 4 generations showed only 7 mutations, which were maintained from mother to offspring.


Assuntos
Bovinos/virologia , Cervos/virologia , Vírus da Diarreia Viral Bovina/patogenicidade , Síndrome Hemorrágica Bovina/transmissão , Aerossóis , Animais , Sequência de Bases , DNA Viral/química , DNA Viral/genética , Vírus da Diarreia Viral Bovina/genética , Vírus da Diarreia Viral Bovina/isolamento & purificação , Transmissão Vertical de Doenças Infecciosas , Dados de Sequência Molecular , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Ruminantes/virologia
17.
Arch Virol ; 151(12): 2365-76, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-16835700

RESUMO

A real-time PCR assay based on primer-probe energy transfer (PriProET) was developed to detect swine vesicular disease virus (SVDV). Specificity tests of SVDV and heterologous virus showed specific amplification of SVDV strains only. The amplification plot for the closely related Coxsackievirus B5 remained negative. The sensitivity of assay was five copies of viral genome equivalents. A key point of the assay is tolerance toward mutations in the probe region. Melting curve analysis directly after PCR, with determination of probe melting point, confirmed specific hybridisation of the SVDV strains. Eight of twenty SVDV strains tested, revealed shifted melting points that indicated mutations in the probe region. All predicted mutations were confirmed by nucleotide sequencing. With the PriProET system there is a chance to identify phylogenetically divergent strains of SVDV, which may appear negative in other probe-based real-time PCR assays. At the same time, any difference in melting points may provide an indication of divergence in the probe region. The high sensitivity, specificity, and tolerance toward mutations in the probe region of the SVDV PriProET assay may improve the early and rapid detection of a wide range of SVDV strains, allowing reduced turnaround time and the use of high-throughput, automated technology.


Assuntos
Enterovirus Humano B/genética , Reação em Cadeia da Polimerase/métodos , Doença Vesicular Suína/virologia , Animais , Pareamento Incorreto de Bases , Sequência de Bases , Primers do DNA , Transferência de Energia , Enterovirus Humano B/classificação , Enterovirus Humano B/isolamento & purificação , Enterovirus Humano B/patogenicidade , Geografia , Dados de Sequência Molecular , RNA Viral/genética , RNA Viral/isolamento & purificação , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Alinhamento de Sequência , Homologia de Sequência do Ácido Nucleico , Suínos , Doenças dos Suínos/diagnóstico , Doenças dos Suínos/virologia , Doença Vesicular Suína/diagnóstico
18.
Prev Vet Med ; 72(1-2): 87-91; discussion 215-9, 2005 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-16213611

RESUMO

Bovine virus diarrhoea virus (BVDV)-1f was isolated from a Lesser Malayan Mousedeer in Copenhagen Zoo during a routine screening. Analysis of animals related to the Copenhagen mousedeer revealed that its mother and all siblings were virus positive, a pattern also seen for persistently infected (PI) cattle. BVDV could be transmitted from the PI mousedeer to a calf after indirect contact. The host spectrum for BVDV seems to be even wider than expected; the implications for BVDV control are discussed.


Assuntos
Doença das Mucosas por Vírus da Diarreia Viral Bovina/transmissão , Cervos/virologia , Reservatórios de Doenças/veterinária , Animais , Animais de Zoológico/virologia , Doença das Mucosas por Vírus da Diarreia Viral Bovina/virologia , Portador Sadio/transmissão , Portador Sadio/veterinária , Portador Sadio/virologia , Bovinos , Vírus da Diarreia Viral Bovina/isolamento & purificação , Feminino
19.
Arch Virol ; 148(10): 2005-21, 2003 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-14551821

RESUMO

Foot-and-mouth disease virus (FMDV) spreads extremely fast and the need for rapid and robust diagnostic virus detection systems was obvious during the recent European epidemic. Using a novel real-time RT-PCR system based on primer-probe energy transfer (PriProET) we present here an assay targeting the 3D gene of FMDV. The assay was validated for the efficacy to detect all known FMDV serotypes. The test method was linear over a range of at least 7 orders of magnitude and the detection limit was below the equivalent of 10 genomic copies. Analysing recent African probang samples the method was able to detect FMDV in materials from both cattle and buffalo. When compared to traditional virus cultivation the virus detection sensitivity was similar but the RT-PCR method can provide a laboratory result much faster than virus cultivation. The real-time PCR method confirms the identity of the amplicon by melting point analysis for added specificity and at the same time allows the detection of mutations in the probe region. As such, the described new method is suitable for the robust real-time detection of index cases caused by any serotype of FMDV.


Assuntos
Transferência de Energia , Corantes Fluorescentes , Vírus da Febre Aftosa/classificação , Vírus da Febre Aftosa/isolamento & purificação , Febre Aftosa/diagnóstico , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Animais , Antígenos Virais/genética , Búfalos , Bovinos , Doenças dos Bovinos/diagnóstico , Doenças dos Bovinos/virologia , Primers do DNA/genética , Febre Aftosa/virologia , Vírus da Febre Aftosa/genética , Dados de Sequência Molecular , Sensibilidade e Especificidade , Análise de Sequência de DNA , Sorotipagem , Proteínas não Estruturais Virais/genética
20.
Arch Virol ; 148(8): 1455-63, 2003 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-12898325

RESUMO

Serum samples from the male Mousedeer A and the mother, father and sister of A were tested for bovine virus diarrhoea viruses (BVDV) by isolation, and for BVDV antibodies by blocking ELISA and homologous neutralisation test. Further, RNA was extracted and tested by RT-PCR protocol analysing the 5'-untranslated region and the E2 gene of pestivirus. The RT-PCR products were subsequently sequenced. Mousedeer A was positive in virus isolation on three occasions (days 1, 19 and 40) and by RT-PCR. The sister and mother of Mousedeer A were also found virus positive by isolation and RT-PCR. Mousedeer A, its sister and its mother, all had an antibody neutralisation titer below 10. The father of A was virus negative but was positive in the blocking antibody ELISA and had a high neutralisation antibody titer. The repeated detection of BVDV in Mousedeer A, the high amount of virus in serum, the lack of antibodies and the virus positive family members documented that the mousedeer were persistently infected with a pestivirus. The father of A probably had an acute infection resulting in antibodies to pestivirus and viral clearance. Sequence analysis and phylogenetic analysis revealed that the mousedeer pestivirus was closely related to BVDV Type 1f. The existences of persistently infected animals in non-domestic species have great implications for BVDV eradication campaigns in cattle.


Assuntos
Vírus da Diarreia Viral Bovina Tipo 1/classificação , Vírus da Diarreia Viral Bovina Tipo 1/isolamento & purificação , Infecções por Pestivirus/veterinária , Ruminantes/virologia , Regiões 5' não Traduzidas/genética , Animais , Anticorpos Antivirais/sangue , Bovinos , Doença Crônica , Vírus da Diarreia Viral Bovina Tipo 1/imunologia , Ensaio de Imunoadsorção Enzimática , Feminino , Masculino , Dados de Sequência Molecular , Infecções por Pestivirus/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Análise de Sequência de DNA , Proteínas Virais/genética
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