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1.
Angew Chem Int Ed Engl ; : e202408258, 2024 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-38837581

RESUMO

Pyrroles and indoles bearing N-allenyl tethers participate in a variety of iridium-catalyzed cycloisomerization processes initiated by a C-H activation step, to deliver a diversity of synthetically relevant azaheterocyclic products. By appropriate selection of the ancillary ligand and the substitution pattern of the allene, the reactions can diverge from simple intramolecular hydrocarbonations to tandem processes involving intriguing mechanistic issues. Accordingly, a wide range of heterocyclic structures ranging from dihydro-indolizines and pyridoindoles to tetrahydroindolizines, as well as cyclopropane-fused tetrahydroindolizines can be obtained. Moreover, by using chiral ligands, these cascade processes can be carried out in an enantioselective manner. DFT studies provide insights into the underlying mechanisms and justify the observed chemo- regio- and stereoselectivities.

2.
Soft Matter ; 19(48): 9344-9364, 2023 Dec 13.
Artigo em Inglês | MEDLINE | ID: mdl-38031449

RESUMO

We review our recent contributions to anisotropic soft matter models for liquid crystal interfaces, drops and membranes, emphasizing validations with experimental and biological data, and with related theory and simulation literature. The presentation aims to illustrate and characterize the rich output and future opportunities of using a methodology based on the liquid crystal-membrane shape equation applied to static and dynamic pattern formation phenomena. The geometry of static and kinetic shapes is usually described with dimensional curvatures that co-mingle shape and curvedness. In this review, we systematically show how the application of a novel decoupled shape-curvedness framework to practical and ubiquitous soft matter phenomena, such as the shape of drops and tactoids and bending of evolving membranes, leads to deeper quantitative insights than when using traditional dimensional mean and Gaussian curvatures. The review focuses only on (1) statics of wrinkling and shape selection in liquid crystal interfaces and membranes; (2) kinetics and dissipative dynamics of shape evolution in membranes; and (3) computational methods for shape selection and shape evolution; due to various limitations other important topics are excluded. Finally, the outlook follows a similar structure. The main results include: (1) single and multiple wavelength corrugations in liquid crystal interfaces appear naturally in the presence of surface splay and bend orientation distortions with scaling laws governed by ratios of anchoring-to-isotropic tension energy; adding membrane elasticity to liquid crystal anchoring generates multiple scales wrinkling as in tulips; drops of liquid crystals encapsulates in membranes can adopt, according to the ratios of anchoring/tension/bending, families of shapes as multilobal, tactoidal, and serrated as observed in biological cells. (2) Mapping the liquid crystal director to a membrane unit normal. The dissipative shape evolution model with irreversible thermodynamics for flows dominated by bending rates, yields new insights. The model explains the kinetic stability of cylinders, while spheres and saddles are attractors. The model also adds to the evolving understanding of outer hair cells in the inner ear. (3) Computational soft matter geometry includes solving shape equations, trajectories on energy and orientation landscapes, and shape-curvedness evolutions on entropy production landscape with efficient numerical methods and adaptive approaches.

3.
Sci Rep ; 13(1): 19675, 2023 Nov 11.
Artigo em Inglês | MEDLINE | ID: mdl-37951989

RESUMO

Gas hydrates are crystalline inclusion compounds formed by trapping gas molecules inside water cages at high pressures and low temperatures. Hydrates are promising materials for hydrogen storage, but their potential depends on understanding their mechanical properties. This work integrates density functional theory (DFT) simulations with a geometry-inspired composite material model to explore the bulk moduli of structure II hydrogen hydrates subjected to pressure loads of - 0.2 to 3 GPa, representative of the hydrogen hydrate formation conditions. Our findings reveal that structure II hydrate comprises a bi-continuous composite of small and large cages with nearly equal volume fractions. The bulk modulus increases with rising pressure but decreases with increasing composition. Notably, these results align closely with the ideal laws of mixtures, especially at low pressures and compositions, where cage interactions are minimal. This integrated DFT-laws of mixtures methodology provides a key database for fast estimation of hydrate mechanical properties without costly computations.

4.
Soft Matter ; 19(27): 5044-5049, 2023 Jul 12.
Artigo em Inglês | MEDLINE | ID: mdl-37395483

RESUMO

We report a computational model for amyloid fibrils and discuss its main features and ability to match different experimental morphological characteristics. The model captures the liquid crystalline and cholesteric behaviours in short and rigid amyloid fibrils and shows promising extendibility to more complex colloidal liquid crystals.


Assuntos
Amiloide , Cristais Líquidos , Amiloide/química , Modelos Moleculares , Cristais Líquidos/química
5.
Sci Rep ; 13(1): 1907, 2023 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-36732541

RESUMO

Gas hydrate mechanical stability under pressure is critically important in energy supply, global warming, and carbon-neutral technologies. The stability of these polyhedral guest-host crystals under increasing pressure is affected by host cage type and face connectivity as well as guest gas occupancy. The geometry-imposed cage connectivity generates crystal lattices that include inclusion-matrix material composite structures. In this paper, we integrate Density Functional Theory simulations with a polyhedral-inspired composite material model that quantifies stability limits, failure modes, and the impact of the type of cage occupancy. DFT reveals the existence of two failure mechanisms under increasing pressure: (i) a multistep lattice breakdown under total occupancy and under only large cage occupancy and (ii) a single-step breakdown under zero occupancy as well as with only small cage occupancy. The DFT-composite model predicts optimal occupancy pathways to generate strength and critical occupancy pathways to promote decomposition.

6.
Langmuir ; 39(4): 1573-1584, 2023 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-36662650

RESUMO

Recent strategies developed to examine the nucleation of crystal structures like tetrahydrofuran (THF) hydrates without the effects of a solid interface have included acoustic levitation, where only a liquid-gas interface initially exists. However, the ability now exists to levitate and freeze multiple droplets simultaneously, which could reveal interdroplet effects and provide further insight into interfacial nucleation phenomena. In this study, using direct digital and infrared imaging techniques, the freezing of up to three simultaneous THF hydrate droplets was investigated for the first time. Nucleation was initiated at the aqueous solution-air interface. Two pseudo-heterogeneous mechanisms created additional nucleation interfaces: one from cavitation effects entraining microbubbles and another from subvisible ice particles, also called hydrate-nucleating particles (HNPs), impacting the droplet surface. For systems containing droplets in both the second and third positions, nucleation was statistically simultaneous between all droplets. This effect may have been caused by the high liquid-solid interfacial pressures that developed at nucleation, causing some cracking in the initial hydrate shell around the droplet and releasing additional HNPs (now of hydrate) into the air. During crystallization, the THF hydrate droplets developed a completely white opacity, termed optical clarity loss (OCL). It was suggested that high hydrate growth rates within the droplet resulted in the capture of tiny air bubbles within the solid phase. In turn, light refraction through many smaller bubbles resulted in the OCL. These bubbles created structural inhomogeneities, which may explain how the volumetric expansion of the droplets upon complete solidification was 23.6% compared with 7.4% in pure, stationary THF hydrate systems. Finally, the thermal gradient that developed between the top and bottom of the droplet during melting resulted in a surface tension gradient along the air-liquid interface. In turn, convective cells developed within the droplet, causing it to spin rapidly about the horizontal axis.

7.
CJC Open ; 4(11): 996-1005, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-36444363

RESUMO

Background: Bleeding is the most common adverse event in those with cardiovascular (CV) disease receiving antithrombotic therapy, and it most commonly occurs in the gastrointestinal (GI) tract. Clinicians often dismiss bleeding as an adverse event that is reversible with effective antithrombotic therapy, but bleeding is associated with substantial morbidity and mortality, most likely mediated through an increased risk of CV events. Reducing the burden of bleeding requires knowledge of the potentially modifiable risk factors for bleeding and the potentially modifiable risk factors for adverse outcomes after bleeding. Methods: INTERBLEED is an international, multicentre, 2-component, observational study, with an incident case-control study examining the risk factors for GI bleeding, and a prospective cohort study of risk factors for CV events after GI bleeding. Cases either have CV disease and present to the hospital with GI bleeding or develop GI bleeding during hospitalization. Controls have CV disease, but no history of GI bleeding. We use a questionnaire to obtain detailed information on known and potential risk factors for GI bleeding and for CV events and outcomes after bleeding. We obtain CV and anthropometric measurements, perform functional and cognitive assessments, and follow participants at 3 months and 12 months. Results: As of April 1, 2022, the study is ongoing in 10 countries at 31 centres and has recruited 2407 cases and 1478 controls. Conclusions: Knowledge of risk factors for bleeding, and risk factors for CV events and functional decline after bleeding, will help develop strategies to prevent bleeding and subsequent complications.


Contexte: L'hémorragie est l'effet indésirable le plus fréquent chez les patients atteints de maladies cardiovasculaires (CV) qui reçoivent un traitement antithrombotique, et elle survient le plus souvent dans le tractus gastro-intestinal (GI). Les cliniciens considèrent souvent l'hémorragie comme une simple manifestation indésirable réversible par un traitement antithrombotique efficace, mais une morbidité et une mortalité considérables y sont associées, probablement en raison d'un risque accru d'événements CV. Une réduction du fardeau de l'hémorragie nécessite une connaissance des facteurs de risque potentiellement modifiables tant de l'hémorragie que des événements indésirables qui surviennent après l'hémorragie. Méthodologie: INTERBLEED est une étude internationale, observationnelle et multicentrique à deux volets; le premier volet est une étude cas-témoins incidents visant à examiner les facteurs de risque d'hémorragie GI, alors que le second volet est une étude de cohorte prospective visant à examiner les facteurs de risque d'événements CV après une hémorragie GI. Les cas sont des patients atteints de maladies CV qui consultent les services hospitaliers pour une hémorragie GI ou qui présentent une hémorragie GI en cours d'hospitalisation. Les témoins sont des patients atteints de maladies CV, mais sans antécédents d'hémorragie GI. Un questionnaire est utilisé pour obtenir des renseignements détaillés au sujet de facteurs de risque connus et potentiels d'hémorragie GI et d'événements CV et d'autres résultats de santé après une hémorragie. Des mesures cardiovasculaires et anthropométriques ainsi que des évaluations fonctionnelles et cognitives sont réalisées, et les participants sont revus après trois mois et 12 mois. Résultats: En date du 1er avril 2022, l'étude est en cours dans 10 pays et 31 établissements de santé; 2 407 cas et 1 478 témoins ont été recrutés. Conclusions: La connaissance des facteurs de risque d'hémorragie, ainsi que des facteurs de risque d'événements CV et de déclin fonctionnel à la suite d'une hémorragie, aidera à mettre en place des stratégies pour prévenir les hémorragies et les complications qui peuvent en découler.

8.
Molecules ; 27(15)2022 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-35956968

RESUMO

(1) Background: New technologies involving gas hydrates under pre-nucleation conditions such as gas separations and storage have become more prominent. This has necessitated the characterization and modeling of the transport properties of such systems. (2) Methodology: This work explored methane hydrate systems under pre-nucleation conditions. All-atom molecular dynamics simulations were used to quantify the performance of the TIP4P/2005 and TIP4P/Ice water models to predict the viscosity, diffusivity, and thermal conductivity using various formulations. (3) Results: Molecular simulation equilibrium was robustly demonstrated using various measures. The Green-Kubo estimation of viscosity outperformed other formulations when combined with TIP4P/Ice, and the same combination outperformed all TIP4P/2005 formulations. The Green-Kubo TIP4P/Ice estimation of viscosity overestimates (by 84% on average) the viscosity of methane hydrate systems under pre-nucleation conditions across all pressures considered (0-5 MPag). The presence of methane was found to increase the average number of hydrogen bonds over time (6.7-7.8%). TIP4P/Ice methane systems were also found to have 16-19% longer hydrogen bond lifetimes over pure water systems. (4) Conclusion: An inherent limitation in the current water force field for its application in the context of transport properties estimations for methane gas hydrate systems. A re-parametrization of the current force field is suggested as a starting point. Until then, this work may serve as a characterization of the deviance in viscosity prediction.

9.
Nanoscale ; 14(28): 10211-10225, 2022 Jul 21.
Artigo em Inglês | MEDLINE | ID: mdl-35797700

RESUMO

The viscosity of oxygen-functionalized multi-walled carbon nanotube (O-MWCNT) nanofluids was measured for concentrations from 0.1 to 10 ppm under conditions of 0 to 30 MPag pressures and 0 to 10 °C temperatures. The presence of O-MWCNTs did not affect the temperature dependence of viscosity but did reduce the effective viscosity of solution due to cumulative hydrogen bond-disrupting surface effects, which overcame internal drag forces. O-MWCNTs added a weak pressure dependence to the viscosity of solution because of their ability to align more with the flow direction as pressure increased. In the liquid to hydrate phase transition, the times to reach the maximum viscosity were faster in O-MWCNT systems compared to the pure water baseline. However, the presence of O-MWCNTs limited the conditions at which hydrates formed as increased nanoparticle collisions in those systems inhibited the formation of critical clusters of hydrate nuclei. The times to viscosity values most relevant to technological applications were minimally 28.02% (200 mPa s) and 21.08% (500 mPa s) slower than the baseline, both in the 1 ppm system, even though all systems were faster to the final viscosity. This was attributed to O-MWCNT entanglement, which resulted in a hydrate slurry occurring at lower viscosity values.

10.
Nat Commun ; 13(1): 2778, 2022 05 19.
Artigo em Inglês | MEDLINE | ID: mdl-35589676

RESUMO

Facile geometric-structural response of liquid crystalline colloids to external fields enables many technological advances. However, the relaxation mechanisms for liquid crystalline colloids under mobile boundaries remain still unexplored. Here, by combining experiments, numerical simulations and theory, we describe the shape and structural relaxation of colloidal liquid crystalline micro-droplets, called tactoids, where amyloid fibrils and cellulose nanocrystals are used as model systems. We show that tactoids shape relaxation bears a universal single exponential decay signature and derive an analytic expression to predict this out of equilibrium process, which is governed by liquid crystalline anisotropic and isotropic contributions. The tactoids structural relaxation shows fundamentally different paths, with first- and second-order exponential decays, depending on the existence of splay/bend/twist orientation structures in the ground state. Our findings offer a comprehensive understanding on dynamic confinement effects in liquid crystalline colloidal systems and may set unexplored directions in the development of novel responsive materials.


Assuntos
Cristais Líquidos , Nanopartículas , Amiloide/química , Anisotropia , Coloides/química , Cristais Líquidos/química , Nanopartículas/química
11.
Nanomaterials (Basel) ; 12(9)2022 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-35564263

RESUMO

Surface wrinkling is closely linked to a significant number of surface functionalities such as wetting, structural colour, tribology, frictions, biological growth and more. Given its ubiquity in nature's surfaces and that most material formation processes are driven by self-assembly and self-organization and many are formed by fibrous composites or analogues of liquid crystals, in this work, we extend our previous theory and modeling work on in silico biomimicking nanowrinkling using chiral liquid crystal surface physics by including higher-order anisotropic surface tension nonlinearities. The modeling is based on a compact liquid crystal shape equation containing anisotropic capillary pressures, whose solution predicts a superposition of uniaxial, equibiaxial and biaxial egg carton surfaces with amplitudes dictated by material anchoring energy parameters and by the symmetry of the liquid crystal orientation field. The numerical solutions are validated by analytical solutions. The blending and interaction of egg carton surfaces create surface reliefs whose amplitudes depend on the highest nonlinearity and whose morphology depends on the anchoring coefficient ratio. Targeting specific wrinkling patterns is realized by selecting trajectories on an appropriate parametric space. Finally, given its importance in surface functionalities and applications, the geometric statistics of the patterns up to the fourth order are characterized and connected to the parametric anchoring energy space. We show how to minimize and/or maximize skewness and kurtosis by specific changes in the surface energy anisotropy. Taken together, this paper presents a theory and simulation platform for the design of nano-wrinkled surfaces with targeted surface roughness metrics generated by internal capillary pressures, of interest in the development of biomimetic multifunctional surfaces.

12.
J Colloid Interface Sci ; 619: 84-95, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35378478

RESUMO

HYPOTHESIS: Understanding the crystallization of atmospheric water can require levitation techniques to avoid the influence of container walls. Recently, an acoustic levitation device called the TinyLev was designed, which can levitate multiple droplets at room temperature. Proximal crystallization may affect droplet phase change and morphological characteristics. METHODOLOGY: In this study, acoustically levitated pure water droplets were frozen individually and in pairs or triplets using a TinyLev device. Nucleation, bulk crystal growth, and melting were observed using digital and infrared cameras concurrently. FINDINGS: Initially, the acoustic field forced the droplets into an oblate spheroid shape, though the counteracting force of the cooling stream caused them to circularize. Droplet geometry was thus the net result of streaming forces and surface tension at the acoustic boundary layer/air-liquid interface. Nucleation was determined to be neither homogeneous nor heterogeneous but secondary, and thus dependent on the cooling rate and not on the degree of supercooling. It was likely initiated by aerosolized ice particles from the air or from droplets that had already nucleated and broken up. The latter secondary ice production process resulted in multi-drop systems with statistically identical nucleation times. Notably, this meant that the presence of interfacial rupture at an adjacent droplet could influence the crystallization behaviour of another. After the formation of an initial ice shell around the individual droplets, dendritic protrusions grew from the droplet surface, likely seeded by the same ice particles that caused nucleation, but at a quasi-liquid layer. When freezing was complete, it was determined that the frozen core had undergone a volumetric expansion of 30.75%, compared to 9% for pure, sessile water expansion. This significantly greater expansion may have resulted from entrained air bubbles at the inner solid-liquid interface and oscillations at the moving phase boundary caused by changes in local acoustic forces. Soon after melting began, acoustic streaming, the buoyancy of the remaining ice, and convective currents caused by both an inner thermal gradient and thermocapillary effects along the air-liquid interface, all contributed to the droplet spinning about the horizontal axis.


Assuntos
Gelo , Água , Cristalização , Congelamento , Transição de Fase , Água/química
13.
Phys Rev E ; 105(3-1): 034702, 2022 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-35428159

RESUMO

Egg cartons, known as doubly sinusoidal surfaces, display a rich variety of saddles-cylinder-spherical patches organized with different spatial symmetries and connectivities. Egg carton surfaces, rich in functionalities, are observed in synthetic and biological materials, as well as across atomic and macroscopic scales. In this work we use the liquid crystal shape equation in the absence of elastic effects and normal stress jumps to predict and classify a family of uniaxial, equibiaxial, and biaxial egg cartons, according to the periodicities of the surface director field in nematic (N) and cholesteric (N*) liquid crystals under the presence of anisotropic surface tension (anchoring). Egg carton surface shape periodic solutions to the nonlinear and linearized liquid crystal shape equations predict that the mean curvature is a linear function of the orthogonal (along the surface normal) splay and bend contributions. Mixtures of egg carton surfaces (uniaxial, equibiaxial, and biaxial) emerge according to the symmetries of the nonsingular director field, and the spatial distributions of the director escape into the third dimension; pure uniaxial egg cartons emerge when the director escape has linelike geometries and mixtures of egg cartons arise under source or sink orientation lattices. Orientation symmetry and permutation analysis are incorporated into a full curvature (Casorati, shape parameter, mean curvature, and Gaussian curvature) characterization. Under a fixed anchoring parameter, conditions for maximal nanoscale curvedness and microscale maximal shape gradient diversity are identified. The present results contribute to various pathways to surface pattern formation using intrinsic anisotropic interfacial tension.

14.
J Rheumatol ; 48(10): 1603-1607, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-33649061

RESUMO

OBJECTIVE: To evaluate the evolution of telomere length from peripheral blood leukocytes (PBLs) in subjects from the Osteoarthritis Initiative (OAI) cohort in relation to the incidence of osteoarthritis (OA), and to explore its possible interactive influence with the mitochondrial DNA (mtDNA) haplogroup. METHODS: Dynamics of telomere sequence loss were quantified in PBLs from initially healthy individuals (without symptoms or radiological signs), 78 carrying the mtDNA cluster HV, and 47 with cluster JT, from the OAI, during a 72-month follow-up period. The incidence of knee OA during this period (n = 39) was radiographically established when Kellgren-Lawrence (KL) score increased from < 2 at recruitment, to ≥ 2 at the end of 72 months of follow-up. Multivariate analysis using binary logistic regression was performed to assess PBL telomere loss and mtDNA haplogroups as associated risk factors of incidence of knee OA. RESULTS: Carriers of cluster HV showed knee OA incidence twice that of the JT carriers (n = 30 vs 9). The rate of PBL telomere loss was higher in cluster HV carriers and in individuals with incident knee OA. Multivariate analysis showed that the dynamics of PBL telomere shortening can be a consistent risk marker of knee OA incidence. Subjects with nonincident knee OA showed a slower telomere loss than those with incident knee OA; the difference was more significant in carriers of cluster JT than in HV. CONCLUSION: An increased rate of telomere loss in PBLs may reflect a systemic accelerated senescence phenotype that could be potentiated by the mitochondrial function, increasing the susceptibility of developing knee OA.


Assuntos
Osteoartrite do Joelho , DNA Mitocondrial/genética , Haplótipos , Humanos , Leucócitos , Mitocôndrias , Osteoartrite do Joelho/diagnóstico por imagem , Osteoartrite do Joelho/genética , Telômero/genética
15.
Neuropsychopharmacology ; 46(5): 982-991, 2021 04.
Artigo em Inglês | MEDLINE | ID: mdl-33558679

RESUMO

Palatable food can promote overfeeding beyond homeostatic requirements, thereby constituting a major risk to obesity. Here, the lack of cannabinoid type 1 receptor (CB1) in dorsal telencephalic glutamatergic neurons (Glu-CB1-KO) abrogated the overconsumption of palatable food and the development of obesity. On low-fat diet, no genotype differences were observed. However, under palatable food conditions, Glu-CB1-KO mice showed decreased body weight and food intake. Notably, Glu-CB1-KO mice were protected from alterations in the reward system after high-fat diet feeding. Interestingly, obese wild-type mice showed a superior olfactory detection as compared to mutant mice, suggesting a link between overconsumption of palatable food and olfactory function. Reconstitution of CB1 expression in olfactory cortex in high-fat diet-fed Glu-CB1-KO mice using viral gene delivery partially reversed the lean phenotype concomitantly with improved odor perception. These findings indicate that CB1 in cortical glutamatergic neurons regulates hedonic feeding, whereby a critical role of the olfactory cortex was uncovered as an underlying mechanism.


Assuntos
Canabinoides , Animais , Dieta Hiperlipídica/efeitos adversos , Camundongos , Camundongos Endogâmicos C57BL , Camundongos Knockout , Neurônios , Obesidade/genética , Receptor CB1 de Canabinoide/genética
16.
J Colloid Interface Sci ; 582(Pt B): 859-873, 2021 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-32916578

RESUMO

HYPOTHESIS: Liquid-crystalline phase separation by nucleation and growth (NG) is a crucial step in the formation of collagen-based biomaterials. However, the fundamental mechanisms are not completely understood for chiral lyotropic colloidal mesogens such as collagen. METHODOLOGY: To capture the dynamics of NG under a quenching process into the biphasic equilibrium zone, we use direct numerical simulation based on the time-dependent Ginzburg-Landau model allowing minimization of the total free energy comprised of five key contributions: phase separation (Flory-Huggins), ordering (Landau-de Gennes), chiral orientational elasticity (Frank-Oseen-Mermin), interfacial and coupling effects. LSTM-RNN is applied as a surrogate model to greatly enrich the results. Significant correlations are established using Symbolic Regression. FINDINGS: We quantify the NG boundaries existing in the collagen phase diagram that has recently been developed and validated by our thermodynamic model (Khadem and Rey, 2019 [1]). We characterize the three NG stages (induction, nucleation, and coarsening) in terms of tactoids' shape, morphology, growth laws, and population across the NG zone. Wide-range generic correlations are developed, revealing the quench depth dependence of NG characteristics and connecting the sequential NG stages. We confirm experimental observations on time-dependent growth law exponent changes from an initial n≈0.5 for the mass transfer limited regime to n≈1 for the volume-driven phase ordering regime upon increasing quench depth during the nucleation period and having exclusively a value of n≈0.5 for the coarsening period regardless of quench depth. We lastly uncover the underlying physics behind the NG phenomena.

17.
Molecules ; 25(23)2020 Nov 27.
Artigo em Inglês | MEDLINE | ID: mdl-33260942

RESUMO

The vibrational characteristics of gas hydrates are key identifying molecular features of their structure and chemical composition. Density functional theory (DFT)-based IR spectra are one of the efficient tools that can be used to distinguish the vibrational signatures of gas hydrates. In this work, ab initio DFT-based IR technique is applied to analyze the vibrational and mechanical features of structure-H (sH) gas hydrate. IR spectra of different sH hydrates are obtained at 0 K at equilibrium and under applied pressure. Information about the main vibrational modes of sH hydrates and the factors that affect them such as guest type and pressure are revealed. The obtained IR spectra of sH gas hydrates agree with experimental/computational literature values. Hydrogen bond's vibrational frequencies are used to determine the hydrate's Young's modulus which confirms the role of these bonds in defining sH hydrate's elasticity. Vibrational frequencies depend on pressure and hydrate's O···O interatomic distance. OH vibrational frequency shifts are related to the OH covalent bond length and present an indication of sH hydrate's hydrogen bond strength. This work presents a new route to determine mechanical properties for sH hydrate based on IR spectra and contributes to the relatively small database of gas hydrates' physical and vibrational properties.


Assuntos
Gases/análise , Gases/química , Hidrogênio/química , Teoria Quântica , Ligação de Hidrogênio , Modelos Moleculares , Conformação Molecular , Espectrofotometria Infravermelho , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Espectral Raman , Vibração
18.
Entropy (Basel) ; 22(9)2020 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-33286678

RESUMO

This paper presents theory and simulation of viscous dissipation in evolving interfaces and membranes under kinematic conditions, known as astigmatic flow, ubiquitous during growth processes in nature. The essential aim is to characterize and explain the underlying connections between curvedness and shape evolution and the rate of entropy production due to viscous bending and torsion rates. The membrane dissipation model used here is known as the Boussinesq-Scriven fluid model. Since the standard approaches in morphological evolution are based on the average, Gaussian and deviatoric curvatures, which comingle shape with curvedness, this paper introduces a novel decoupled approach whereby shape is independent of curvedness. In this curvedness-shape landscape, the entropy production surface under constant homogeneous normal velocity decays with growth but oscillates with shape changes. Saddles and spheres are minima while cylindrical patches are maxima. The astigmatic flow trajectories on the entropy production surface, show that only cylinders and spheres grow under the constant shape. Small deviations from cylindrical shapes evolve towards spheres or saddles depending on the initial condition, where dissipation rates decrease. Taken together the results and analysis provide novel and significant relations between shape evolution and viscous dissipation in deforming viscous membrane and surfaces.

19.
Nat Commun ; 11(1): 4616, 2020 09 15.
Artigo em Inglês | MEDLINE | ID: mdl-32934229

RESUMO

Para-nematic phases, induced by unwinding chiral helices, spontaneously relax to a chiral ground state through phase ordering dynamics that are of great interest and crucial for applications such as stimuli-responsive and biomimetic engineering. In this work, we characterize the cholesteric phase relaxation behaviors of ß-lactoglobulin amyloid fibrils and cellulose nanocrystals confined into cylindrical capillaries, uncovering two different equilibration pathways. The integration of experimental measurements and theoretical predictions reveals the starkly distinct underlying mechanism behind the relaxation dynamics of ß-lactoglobulin amyloid fibrils, characterized by slow equilibration achieved through consecutive sigmoidal-like steps, and of cellulose nanocrystals, characterized by fast equilibration obtained through smooth relaxation dynamics. Particularly, the specific relaxation behaviors are shown to emerge from the order parameter of the unwound cholesteric medium, which depends on chirality and elasticity. The experimental findings are supported by direct numerical simulations, allowing to establish hard-to-measure viscoelastic properties without applying magnetic or electric fields.


Assuntos
Lactoglobulinas/química , Cristais Líquidos/química , Amiloide/química , Coloides/química , Elasticidade , Cinética , Nanopartículas/química , Transição de Fase , Temperatura
20.
J Mol Graph Model ; 100: 107709, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32866779

RESUMO

The understanding of polymer solution thermodynamics and characterization of pressure effects on fundamental polymer physics of macromolecular systems is significant in the manufacturing of polyolefins. Consequently, numerous experimental and theoretical efforts have been made towards understanding phase behavior of polymer solutions at elevated pressures. Despite this progress, only limited efforts are directed towards understanding the underlying phenomena behind the influence of high pressure upon the thermophysical properties of ternary polymer solutions at a molecular level. The present paper, therefore, reports on the influence of supercritical ethylene on the density of PE + hydrocarbon solvent system by exploring ternary mixtures of PE + hexane + ethylene for ethylene concentrations up to 10 wt% at varied temperatures and in a pressure range from 100 to 1000 bar via fully-atomistic molecular dynamics (MD) simulations. Additionally, the modified Sanchez-Lacombe equation of state (EOS) model is iteratively solved to capture the pressure, concentration, and temperature dependence of ternary PE solution density. It is shown that the small amounts of ethylene dissolved in the liquid mixtures of PE + hexane significantly decreases the polymer solution density. The presence of unreacted monomer in the solution polymerization process utilized in PE manufacturing was found to substantially lower the PE solution density particularly at the lower end of the investigated pressure range. This noteworthy reduction in mixture density as a consequence impacts design and operation of the liquid-liquid phase separator in manufacturing of PE via solution polymerization. Another key point to bear in mind is that the mixture density exhibits fairly less sensitivity to ethylene amount as external pressure raises. Nevertheless, pressure, solvent composition, and temperature dependence of density display less sensitivity as pressure increases. In relation to the characterization of the impact of addition of ethylene an atomistic-level insight is provided, which proves to be of great value in revealing intermolecular interactions in the binary subsystems of polymer/solvent/monomer. The MD computations are shown to be in excellent agreement with the theoretical EOS model, confirming the validity of the proposed methodology. Furthermore, the adopted OPLS-AA has been found a reliable atomistic force field, which provides detailed molecular information on the thermophysical properties of polyolefin in hydrocarbon solutions. Ultimately, it is demonstrated that the MD simulations complement parametric EOS predictions and costly experimental approaches.


Assuntos
Hexanos , Simulação de Dinâmica Molecular , Etilenos , Polietileno , Termodinâmica
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