Genotyping of Malassezia pachydermatis disclosed genetic variation in isolates from dogs in Colombia / Genotipagem de Malassezia pachydermatis revelou variação genética em isolados de cães na Colômbia

Malassezia pachydermatis is a lipophilic and lipid-dependent yeast mostly isolated from animals' skin; hence, it is regarded as a zoophilic species causing otitis externa in dogs. Aspects associated with its epidemiology and pathogenicity is a matter of interest. This study aimed to conduct a molecular characterization of 43 isolates of M. pachydermatis obtained from dogs with otitis externa. For this purpose, the 5.8S internal transcribed spacer 2 (ITS2) and D1/D2 26S rRNA regions were amplified, sequenced and analyzed using restriction fragment length polymorphism (RFLP) with AluI, CfoI, and BstF5I endonucleases. Phylogenetic analyses revealed that these isolates grouped with the sequence types I, IV and V, previously proposed for M. pachydermatis. Interestingly, we found a new polymorphic RFLP pattern using BstF5I, these isolates were associated with the sequence types IV and V, nevertheless an association between polymorphic RFLP patterns, and fosfolipase activity or canine population data was not observed. These findings underline the genetic diversity of M. pachydermatis and provide new insights about the epidemiology of this species in the analyzed population.(AU)

Malassezia pachydermatis é uma levedura lipofílica e dependente de lipídios, principalmente da pele de animais. Sendo, por essa razão, considerada uma espécie zoofílica e causadora de otite externa em cães. Neste sentido, aspectos associados à sua epidemiologia e patogenicidade constituem um tema de interesse científico. O objetivo deste estudo foi realizar a caracterização molecular de 43 isolados de M. pachydermatis obtidos a partir de cães com otite externa. Para esta propósito, foram amplificadas, sequenciadas e analisadas com enzimas de restrição as regiões do gene 5.8S, do espaçador interno transcrito 2 (ITS2) e D1/D2 do 26S do rRNA pelo método RFLP, com as endonucleases AluI, CfOI e BstF5I. Análises filogenéticas revelaram que os isolados se agruparam com as sequências tipo I, IV e V de M. pachydermatis como já descrito anteriormente. De maneira interessante, se observou um novo RFLP polimórfico utilizando BstF5I. Os isolados que mostraram esse padrão foram associados com os padrões IV e V. No entanto, não foi observada associação entre padrões polimórficos de RFLP e atividade de fosfolipase ou dados da população canina. Estes resultados demonstram a diversidade genética de M. pachydermatis e fornecem novas perspectivas sobre a epidemiologia destas espécies na população analisada.(AU)

Actividad antifúngica in vitro de azoles y anfotericina B frente a Malassezia furfur por el método de microdilución M27-A3 del CLSI y Etest® / In vitro antifungal activity of azoles and amphotericin B against Malassezia furfur by the CLSI M27-A3 microdilution and Etest® methods

Antecedentes. Malassezia furfur es una levadura comensal de la piel del ser humano que ha sido asociada con la presencia de algunas entidades dermatológicas e infecciones sistémicas oportunistas. Por su condición dependiente de lípidos, los métodos de referencia establecidos para las levaduras por el Clinical and Laboratory Standards Institute (CLSI) para evaluar la sensibilidad antifúngica no son aplicables. Objetivos. Evaluar la sensibilidad in vitro de aislamientos de M. furfur asociados a procesos patológicos en el ser humano frente a antifúngicos de uso clínico. Métodos. Se evaluó el perfil de sensibilidad a la anfotericina B, el itraconazol, el ketoconazol y el voriconazol de 20 aislamientos de M. furfur mediante el método de microdilución en caldo (CLSI M27-A3) y Etest®. Resultados. El itraconazol y el voriconazol presentaron la mayor actividad antifúngica frente a los aislamientos evaluados. El acuerdo esencial entre los dos métodos usados para evaluar la actividad antifúngica de los azoles estuvo en el 60-85%, y el acuerdo categórico en el 70-80%; para la anfotericina B tanto el acuerdo esencial como el categórico fueron del 10%. Conclusiones. De acuerdo con los dos métodos evaluados los azoles fueron los compuestos que presentaron la mayor actividad antifúngica frente a M. furfur; sin embargo, es necesario realizar más estudios que permitan afirmar que Etest® es un método confiable para ser implementado en la rutina del laboratorio clínico (AU)

Background. Malassezia furfur is a human skin commensal yeast that can cause skin and opportunistic systemic infections. Given its lipid dependant status, the reference methods established by the Clinical and Laboratory Standards Institute (CLSI) to evaluate antifungal susceptibility in yeasts are not applicable. Aims. To evaluate the in vitro susceptibility of M. furfur isolates from infections in humans to antifungals of clinical use. Methods. The susceptibility profile to amphotericin B, itraconazole, ketoconazole and voriconazole of 20 isolates of M. furfur, using the broth microdilution method (CLSI M27-A3) and Etest®, was evaluated. Results. Itraconazole and voriconazole had the highest antifungal activity against the isolates tested. The essential agreement between the two methods for azoles antifungal activity was in the region of 60-85% and the categorical agreement was around 70-80%, while the essential and categorical agreement for amphotericin B was 10%. Conclusions. The azoles were the compounds that showed the highest antifungal activity against M. furfur, as determined by the two techniques used; however more studies need to be performed to support that Etest® is a reliable method before its implementation as a routine clinical laboratory test (AU)

[In vitro antifungal activity of azoles and amphotericin B against Malassezia furfur by the CLSI M27-A3 microdilution and Etest® methods]. / Actividad antifúngica in vitro de azoles y anfotericina B frente a Malassezia furfur por el método de microdilución M27-A3 del CLSI y Etest®.

BACKGROUND: Malassezia furfur is a human skin commensal yeast that can cause skin and opportunistic systemic infections. Given its lipid dependant status, the reference methods established by the Clinical and Laboratory Standards Institute (CLSI) to evaluate antifungal susceptibility in yeasts are not applicable. AIMS: To evaluate the in vitro susceptibility of M. furfur isolates from infections in humans to antifungals of clinical use. METHODS: The susceptibility profile to amphotericin B, itraconazole, ketoconazole and voriconazole of 20 isolates of M. furfur, using the broth microdilution method (CLSI M27-A3) and Etest®, was evaluated. RESULTS: Itraconazole and voriconazole had the highest antifungal activity against the isolates tested. The essential agreement between the two methods for azoles antifungal activity was in the region of 60-85% and the categorical agreement was around 70-80%, while the essential and categorical agreement for amphotericin B was 10%. CONCLUSIONS: The azoles were the compounds that showed the highest antifungal activity against M. furfur, as determined by the two techniques used; however more studies need to be performed to support that Etest® is a reliable method before its implementation as a routine clinical laboratory test.

Optimizing a culture medium for biomass and phenolic compounds production using Ganoderma lucidum.

The present work was aimed at optimizing a culture medium for biomass production and phenolic compounds by using Ganoderma lucidum. The culture was optimized in two stages; a Plackett-Burman design was used in the first one for identifying key components in the medium and a central composite design was used in the second one for optimizing their concentration. Both responses (biomass and phenolic compounds) were simultaneously optimized by the latter methodology regarding desirability, and the optimal concentrations obtained were 50.00 g/L sucrose, 13.29 g/L yeast extract and 2.99 g/L olive oil. Maximum biomass production identified in these optimal conditions was 9.5 g/L and that for phenolic compounds was 0.0452 g/L, this being 100% better than that obtained in the media usually used in the laboratory. Similar patterns regarding chemical characterization and biological activity towards Aspergillus sp., from both fruiting body and mycelium-derived secondary metabolites and extracts obtained in the proposed medium were observed. It was shown that such statistical methodologies are useful for optimizing fermentation and, in the specific case of G. lucidum, optimizing processes for its production and its metabolites in submerged culture as an alternative to traditional culture.

Optimizing a culture medium for biomass and phenolic compounds production using Ganoderma lucidum

The present work was aimed at optimizing a culture medium for biomass production and phenolic compounds by using Ganoderma lucidum. The culture was optimized in two stages; a Plackett-Burman design was used in the first one for identifying key components in the medium and a central composite design was used in the second one for optimizing their concentration. Both responses (biomass and phenolic compounds) were simultaneously optimized by the latter methodology regarding desirability, and the optimal concentrations obtained were 50.00 g/L sucrose, 13.29 g/L yeast extract and 2.99 g/L olive oil. Maximum biomass production identified in these optimal conditions was 9.5 g/L and that for phenolic compounds was 0.0452 g/L, this being 100% better than that obtained in the media usually used in the laboratory. Similar patterns regarding chemical characterization and biological activity towards Aspergillus sp., from both fruiting body and mycelium-derived secondary metabolites and extracts obtained in the proposed medium were observed. It was shown that such statistical methodologies are useful for optimizing fermentation and, in the specific case of G. lucidum, optimizing processes for its production and its metabolites in submerged culture as an alternative to traditional culture.

Evaluación de actividades enzimáticas de Fusarium spp., aislados de lesiones en humanos, animales y plantas / Avaliação das atividades enzimáticas de Fusarium spp. Isolados a partir de lesões em humanos, animais e plantas / Assessment of enzymatic characterization of Fusarium spp. isolated from human, animal, and plant rounds

Objetivo. Determinar actividades amilolíticas, celulolíticas, lipolíticas, pectinolíticas y proteolíticas en 32 aislamientos de Fusarium spp. de origen humano, animal y vegetal. Materiales y métodos. Las actividades enzimáticas se determinaron a nivel cualitativo, por medio de la medición de halos de hidrólisis en placas de agar con el respectivo sustrato, y a nivel cuantitativo se realizó un cultivo líquido para determinar la degradación del respectivo sustrato por medio de técnicas colorimétricas. Resultados. Todos los aislamientos presentaron actividades enzimáticas a nivel cualitativo, excepto las amilolíticas y lipolíticas. La determinación a nivel cuantitativo fue posible para las enzimas evaluadas, a excepción de las lipasas. Conclusión. La determinación de los perfiles enzimáticos amilolíticos, celulolíticos, pectinolíticos y proteolíticos de cada uno de los aislamientos evaluados pertenecientes al género Fusarium sugirió su capacidad, indistintamente de su procedencia, de degradar estos sustratos...

Assessment of enzymatic characterization of Fusarium spp. isolated from human, animal, and plant wounds. Objective. To determine amylolytic, cellulolytic, lipolytic, pectinolytic and proteolytic activities in 32 Fusarium spp. isolates from humans, animals and plants. Materials and methods. Qualitative determination of enzymatic activities was done by measuring hydrolysis halos in agar plates with their corresponding substrate. Quantitative determination was done by colorimetric techniques, using liquid culture supernatants to determine the respective substrate degradation. Results. All isolates showed enzymatic activities from a qualitative point of view, except amylolytic and lipolytic. Quantitative determination was possible for all the evaluated enzymes except lipases. Conclusion. The determination of amylolytic, cellulolytic, pectinolytic and proteolytic enzymatic profiles of each of the Fusarium isolates assessed suggests their capacity to degrade these substrates, irrespectively of their origin...

Avaliação das atividades enzimáticas de Fusarium spp. Isolados a partir de lesões em humanos, animais e plantas. Objetivo. Determinar as atividades amilolíticas, celulolíticas, lipolítica, pectinolíticas e proteolíticas em 32 isolamentos de Fusarium spp. de origem humana, animal e vegetal. Materiais e métodos. As atividades enzimáticas foram determinadas a nível qualitativo medindo os halos de hidrólise em placas de agar com o substrato respectivo e a nível quantitativo realizou-se uma cultura líquida para determinar a degradação do substrato respectivos por meio de técnicas colorimétricas. Resultados. Todos os isolados apresentaram uma atividade enzimática a nível qualitativo, exceto as amilolíticas e lipolíticas. A determinação a nível quantitativo foi possível para as enzimas testadas, exceto para as lipases. Conclusão. A determinação de perfis enzimáticos amilolíticos, celulolíticos, pectinolíticos e proteolíticos de cada um dos isolados testados pertencentes ao gênero Fusarium, sugeriu sua capacidade, independentemente da sua origem, para degradar estes substratos...

Efecto del sustrato y la exposición a la luz en la producción de una cepa de Trichoderma sp / Effects of substrate and light exposition in the production of Trichoderma sp

Con el fin de evaluar el efecto de las condiciones de luz sobre la producción de biomasa de una cepa de Trichoderma sp. en fermentación sólida y sumergida, se probaron medios arroz 53 por ciento (p/p), arroz 53 por ciento (p/p)-melaza 3 por ciento(p/p) y arroz 53 por ciento (p/p)-melaza 10 por ciento (p/p) en agua destilada, con incubación 25oC y períodos de luz constante y fotoperíodo 24 h luz/24 h oscuridad durante 8 días. Los parámetros estimados fueron densidad poblacional (conidios/mL), germinación de esporas a 24 horas y porcentaje de pureza. Los resultados indicaron que el proceso de fermentación sólida empleando como sustrato arroz-agua destilada a 25ðC y la exposición constante a la luz permitió mayor recuperación de conidios (45x1018 conidios/mL), con 96 por ciento de germinación a 24 horas y una pureza estimada de 92,1por ciento. En la fermentación sumergida se obtuvo un porcentaje de pureza del 76,8 por ciento y la germinación de conidios a las 24 h fue de 91,2 por ciento, mostrando como desventaja un bajo porcentaje de pureza frente a la fermentación sólida.

In order to evaluate the effect of temperature and light conditions on biomass production of a Trichoderma sp. strain, three culture media were tested: rice 53% (w/w), rice 53% (w/w) -molasses 3% (w/w) and rice 53% (w/w)-molasses 10% (w/w) in distilled water. Incubation conditions were: 25°C, constant light and a photoperiod of 24 h light/24 h darkness during 8 days. The evaluated parameters were population density (conidia/mL), spore germination after 24 hours and purity percentage. The results showed that solid fermentation using rice - distilled water as substrate at 25°C and constant light, allowedthe highest conidia yield (45x1018 conidia/mL), 96% germination after 24 hours, and 92.1% purity. The liquid fermentation rendered a purityof 76.8% and conidia germination of 91.2% after 24 hours, showing a disadvantageous lower purity percentage compared to solidfermentation.

Com a finalidade de avaliar o efeito das condições de luz sobre a produção de biomassa de uma cepa de Trichoderma sp, em fermentação sólida e submergida, foram testados diferentes meios: arroz 53% (p/p), arroz 53% (p/p)-melaço 3% (p/p) e arroz 53% (p/p)-melaço 10% (p/p) em água destilada, com incubação 25°C e períodos de luz constante e fotoperíodo 24 h luz/24 h escuridão durante 8 dias. Os parâmetros estimados foram densidade populacional (conídios/mL), germinação de esporas a 24 horas e porcentagem de pureza. Os resultados indicaram que o processo de fermentação sólida usando como substrato arroz-água destilada a 25ºC e exposição constante à luz, permitiu maior recuperação de conídios (45x1018 conídios/mL), com 96% de germinação a 24 horas e uma pureza estimada de 92,1%. Na fermentação submergida obteve-se um percentual de pureza de 76,8% e a germinação de conídios as 24 h foi de 91,2%, mostrando como desvantagem um baixo percentual de pureza frente à fermentação sólida.