Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 29
Filtrar
1.
J Environ Manage ; 341: 118100, 2023 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-37209591

RESUMO

New cement-based materials such as alkali-activated binders (AABs) or geopolymers allow the incorporation of waste or industrial by-products in their formulation, resulting an interesting valorization technique. Therefore, it is essential to inquire about the potential environmental and health impacts throughout their life cycle. In the European context, a minimum aquatic toxicity tests battery has been recommended for construction products, but their potential biological effects on marine ecosystems have not been considered. In this study, three industrial by-products, PAVAL® (PV) aluminum oxide, weathered bottom ash (WBA) resulting from incinerator bottom ash and glass cullet recycling waste (CSP), were evaluated as precursors in the AAB formulation from an environmental point of view. To determine the potential effects on marine environment caused by the leaching of contaminants from these materials into seawater, the leaching test EN-12457-2 and an ecotoxicity test using the model organism sea urchin Paracentrotus lividus were conducted. The percentage of abnormal larval development was selected as endpoint of the toxicity test. Based on the results obtained from the toxicity tests, AABs have less damaging impact (EC50 values: 49.2%-51.9%) on the marine environment in general than raw materials. The results highlight the need to stablish a specific battery of toxicity tests for the environmental assessment of construction products on marine ecosystem.


Assuntos
Cinza de Carvão , Ecossistema , Animais , Álcalis , Bioensaio , Desenvolvimento Embrionário , Ouriços-do-Mar
2.
Environ Sci Pollut Res Int ; 29(41): 61630-61642, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35000166

RESUMO

Qanats in the aquifer of the Tehuacán Valley (Mexico) represent an ancient way of using groundwater that is still practiced today. They are used mainly for agricultural irrigation. However, anthropogenic activities have jeopardized the use of these aquifers. We analyzed 24 qanats in the Tehuacán Valley to assess water quality. Based on 24 physicochemical variables, a water quality index (WQI) was constructed on a zero-to-100 scale, divided into five water quality classes. A decision-tree analysis was applied to identify the parameters with the highest influence on the WQI, considering the water quality classes as categorical responses and the values of physicochemical variables as drivers of these categories. We produced interpolation maps to identify trends. The relationship between the WQI and the normalized difference indices of vegetation and salinity (NDVI and NDSI, respectively) was analyzed using a ternary diagram. WQI scores showed that 12.5% of the qanats have very good quality; 25%, good quality; and the remaining (62.5%) range from moderate to unacceptable quality. The CHAID classification-tree method correctly explained 83.3% of the categories, with sulfates, alkalinity, conductivity, and nitrates as the main parameters that explain water quality. WQI was inversely related to NDVI and NDSI, showing seasonal differences. Interpolation maps suggest a better water quality in the northern zone of the aquifer.


Assuntos
Água Subterrânea , Poluentes Químicos da Água , Irrigação Agrícola , Monitoramento Ambiental/métodos , Água Subterrânea/análise , México , Poluentes Químicos da Água/análise , Qualidade da Água
3.
J Hazard Mater ; 416: 125828, 2021 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-34492789

RESUMO

Alkali-activated binders (AABs) stand out as a sustainable alternative to ordinary Portland cement (OPC) as they can be formulated using by-products or waste as raw materials. However, the presence of hazardous compounds in residues can lead to an increase in AABs' toxicity due to the highly alkaline media. Therefore, it is extremely important to evaluate their environmental risks to validate their use as building materials. This study environmentally assessed AABs prepared with two different fractions (0-30 mm and 8-30 mm) of weathered bottom ash (AA-WBA) from WtE plants. The potential leachate toxicity of AA-WBA was assessed using granular and monolithic leaching tests that simulated end-of-life and service life scenarios, respectively. Furthermore, an acute toxicity test with crustacean Daphnia magna as model organisms was conducted to determine the relationship between the leachate metal(loid) concentrations and the ecotoxicity of AA-WBA. The results showed higher metal(loid) concentrations in AA-WBA specimens prepared with the 0-30 mm fraction of WBA. The service life scenario revealed multiple metal(loid)-release mechanisms. The 48 h EC50 value (close to 10%; moderate toxicity) indicated that the use of the coarse fraction of WBA increased the immobilisation of the metal(loid)s. Finally, the correlation between the concentrations of some of the metal(loid)s and toxicity was demonstrated.


Assuntos
Cinza de Carvão , Metais Pesados , Álcalis , Cinza de Carvão/toxicidade , Incineração , Metais Pesados/análise , Resíduos Sólidos/análise
4.
Sci Total Environ ; 683: 134-145, 2019 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-31129324

RESUMO

In the present study the model isopod, Cyathura carinata were exposed to four pHNIST treatments (control: 7.9; 7.5, 7, 6.5) in order to determine the tolerance and pH threshold value this estuarine species withstand under future acidification scenarios. Seawater acidification significantly affected the lifespan of C. carinata, where population density was remarkably reduced at the lowest pH treatment. The longevity, survivorship and swimming activity (related to the acquisition of energy) of these isopods decreased with decreasing pH. Furthermore, to determine the possible metabolic plasticity of this species, the swimming activity, the Na+/K + -ATPase activity (relevant for osmoregulation process), and the RNA:DNA ratio (an indicator of fitness) were measure from two populations of C. carinata, one inhabiting a stable environment (pHNIST 7.5-8.0) and one inhabiting a fluctuating pCO2 regimes (pH 3.3-8.5) subjected to three pH treatments (7.9, 7.0 and 6.5). The population from high fluctuating pCO2 conditions showed capacity to withstand to pH 6.5, as well as higher longevity and metabolic plasticity, when compared with the population from the habitat with slight pCO2 variation. These results indicate that Cyathura population from stable environments could be vulnerable to ocean acidification because it could trigger detrimental effects on its survival energy budget, and growth. However, ocean acidification has limited effect on the energy budget and survival of C. carinata population from highly variable habitats, suggesting that they are able to cope with the elevated energy demand. The difference showed between populations is likely an indication of genetic differentiation in tolerance to ocean acidification, possibly attributable to local adaptations, which could provide the raw material necessary for adaptation to future conditions. In addition, our results suggest that when assessing marine crustacean responses to changing environments on a global scale, variability in population and metabolic responses need to be considered.


Assuntos
Aclimatação , Isópodes/fisiologia , Água do Mar/química , Adaptação Fisiológica , Animais , Concentração de Íons de Hidrogênio , Espanha
5.
Chemosphere ; 120: 138-44, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25016337

RESUMO

The results of sediment quality assessment by two different weight-of-evidence methodologies were compared. Both methodologies used the same dataset but as criteria and procedures were different, the results emphasized different aspects of sediment contamination. One of the methodologies integrated the data by means of a multivariate analysis and suggested bioavailability of contaminants and their spatial distribution. The other methodology, used in the dredged material management framework recently proposed in Spain, evaluated sediment toxicity in general by assigning categories. Despite the differences in the interpretation and presentation of results, the methodologies evaluated sediment risk similarly, taking into account chemical concentrations and toxicological effects. Comparison of the results of different approaches is important to define their limitations and thereby avoid implications of potential environmental impacts from different management options, as in the case of dredged material risk assessment. Consistent results of these two methodologies emphasized validity and robustness of the integrated, weight-of-evidence, approach to sediment quality assessment. Limitations of the methodologies were discussed.


Assuntos
Monitoramento Ambiental/métodos , Poluentes Ambientais/toxicidade , Sedimentos Geológicos/análise , Aliivibrio fischeri/efeitos dos fármacos , Aliivibrio fischeri/metabolismo , Anfípodes/efeitos dos fármacos , Anfípodes/metabolismo , Animais , Disponibilidade Biológica , Fenômenos Químicos , Poluentes Ambientais/química , Poluentes Ambientais/farmacocinética , Sedimentos Geológicos/química , Paracentrotus/efeitos dos fármacos , Paracentrotus/metabolismo , Poliquetos/efeitos dos fármacos , Poliquetos/metabolismo , Análise de Componente Principal , Espanha , Testes de Toxicidade
6.
Mar Environ Res ; 96: 136-44, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24148229

RESUMO

The injection and storage of CO2 into marine geological formations has been suggested as a mitigation measure to prevent global warming. However, storage leaks are possible resulting in several effects in the ecosystem. Laboratory-scale experiments were performed to evaluate the effects of CO2 leakage on the fate of metals and on the growth of the microalgae Phaeodactylum tricornutum. Metal contaminated sediments were collected and submitted to acidification by means of CO2 injection or by adding HCl. Sediments elutriate were prepared to perform toxicity tests. The results showed that sediment acidification enhanced the release of metals to elutriates. Iron and zinc were the metals most influenced by this process and their concentration increased greatly with pH decreases. Diatom growth was inhibited by both processes: acidification and the presence of metals. Data obtained is this study is useful to calculate the potential risk of CCS activities to the marine environment.


Assuntos
Dióxido de Carbono/metabolismo , Diatomáceas/efeitos dos fármacos , Sedimentos Geológicos/química , Ácido Clorídrico/química , Metais/toxicidade , Dióxido de Carbono/química , Monitoramento Ambiental , Estuários , Concentração de Íons de Hidrogênio , Metais/química , Testes de Toxicidade Aguda , Poluentes Químicos da Água/toxicidade
7.
Mar Pollut Bull ; 70(1-2): 204-9, 2013 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-23601886

RESUMO

The potential toxicity of sediments from various ports was assessed by means of two different liquid-phase toxicity bioassays (acute and chronic) with embryos and eggs of sea urchin Paracentrotus lividus. Performances of embryos and eggs of P. lividus in these bioassays were compared for their interchangeable applicability in integrated sediment quality assessment. The obtained endpoints (percentages of normally developed plutei and fertilized eggs) were linked to physical and chemical properties of sediments and demonstrated dependence on sediment contamination. The endpoints in the two bioassays were strongly correlated and generally exhibited similar tendency throughout the samples. Therein, embryos demonstrated higher sensitivity to elutriate exposure, compared to eggs. It was concluded that these tests could be used interchangeably for testing toxicity of marine sediments. Preferential use of any of the bioassays can be determined by the discriminatory capacity of the test or vulnerability consideration of the test subject to the surrounding conditions.


Assuntos
Bioensaio/métodos , Embrião não Mamífero/efeitos dos fármacos , Monitoramento Ambiental/métodos , Óvulo/efeitos dos fármacos , Poluentes Químicos da Água/toxicidade , Animais , Sedimentos Geológicos/química , Ouriços-do-Mar , Testes de Toxicidade
8.
Ecotoxicol Environ Saf ; 92: 281-8, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23531332

RESUMO

The selection of the best management option for contaminated sediments requires the biological assessment of sediment quality using bioindicator organisms. There have been comparisons of the performance of different test species when exposed to naturally occurring sediments. However, more research is needed to determine their suitability to be used interchangeably. The sensitivity of two amphipod species (Ampelisca brevicornis and Corophium volutator) to sediments collected from four different commercial ports in Spain was tested. For comparison the lugworm, Arenicola marina, which is typically used for bioaccumulation testing, was also tested. Chemical analyses of the sediments were also conducted. All species responded consistently to the chemical exposure tests, although the amphipods, as expected, were more sensitive than the lugworm. It was found that C. volutator showed higher vulnerability than A.brevicornis. It was concluded that the three species can be used interchangeably in the battery of tests for integrated sediment quality assessment.


Assuntos
Organismos Aquáticos/efeitos dos fármacos , Monitoramento Ambiental/métodos , Sedimentos Geológicos/química , Poluentes Químicos da Água/toxicidade , Anfípodes , Animais , Poliquetos , Espanha , Especificidade da Espécie , Poluentes Químicos da Água/análise
9.
Curr Med Chem ; 19(31): 5414-23, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22830340

RESUMO

Physalia physalis is a marine cnidarian from which high molecular weight toxins with hemolytic and neurotoxic effects have been isolated. In the present work, two novel toxins, PpV9.4 and PpV19.3 were purified from P. physalis by bioactive guideline isolation. It involved two steps of column chromatography, gel filtration and RP-HPLC. The molecular weights were 550.7 and 4720.9 Da for PpV9.4 and PpV19.3, respectively. In the light of the Edman sequencing results, the structure of these toxins included the presence of modified amino acids. Both toxins increased the percentage of insulin secreting beta-cells and induced cytosolic Ca2+ elevation. To date, this is the first report of low molecular weight toxins increasing insulin secretion purified from cnidarians, by constituting a new approach to the study of beta-cells physiology.


Assuntos
Cálcio/metabolismo , Hidrozoários/metabolismo , Células Secretoras de Insulina/efeitos dos fármacos , Insulina/metabolismo , Toxinas Biológicas/farmacologia , Animais , Sobrevivência Celular/efeitos dos fármacos , Células Cultivadas , Cromatografia em Gel , Cromatografia de Fase Reversa , Hemólise/efeitos dos fármacos , Secreção de Insulina , Células Secretoras de Insulina/metabolismo , Ratos , Ratos Wistar , Toxinas Biológicas/isolamento & purificação
10.
J Comput Aided Mol Des ; 25(12): 1135-45, 2011 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22139522

RESUMO

We describe in this work a successful virtual screening and experimental testing aimed to the identification of novel inhibitors of superoxide dismutase of the worm Taenia solium (TsCu/Zn-SOD), a human parasite. Conformers from LeadQuest(®) database of drug-like compounds were selected and then docked on the surface of TsCu/Zn-SOD. Results were screened looking for ligand contacts with receptor side-chains not conserved in the human homologue, with a subsequent development of a score optimization by a set of energy minimization steps, aimed to identify lead compounds for in vitro experiments. Six out of fifty experimentally tested compounds showed µM inhibitory activity toward TsCu/Zn-SOD. Two of them showed species selectivity since did not inhibit the homologous human enzyme when assayed in vitro.


Assuntos
Antiparasitários/química , Antiparasitários/farmacologia , Inibidores Enzimáticos/química , Inibidores Enzimáticos/farmacologia , Superóxido Dismutase/antagonistas & inibidores , Superóxido Dismutase/metabolismo , Taenia solium/enzimologia , Sequência de Aminoácidos , Animais , Desenho de Fármacos , Humanos , Modelos Moleculares , Dados de Sequência Molecular , Alinhamento de Sequência , Superóxido Dismutase/química , Taenia solium/efeitos dos fármacos , Teníase/tratamento farmacológico
11.
Environ Sci Pollut Res Int ; 19(7): 2550-60, 2011 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22828884

RESUMO

CO(2) leakages during carbon capture and storage in sub-seabed geological structures could produce potential impacts on the marine environment. To study lethal effects on marine organisms attributable to CO(2) seawater acidification, a bubbling CO(2) system was designed enabling a battery of different tests to be conducted, under laboratory conditions, employing various pH treatments (8.0, 7.5, 7.0, 6.5, 6.0, and 5.5). Assays were performed of three exposure routes (seawater, whole sediment, and sediment elutriate). Individuals of the clam (Ruditapes philippinarum) and early-life stages of the gilthead seabream, Sparus aurata, were exposed for 10 days and 72 h, respectively, to acidified clean seawater. S. aurata larvae were also exposed to acidified elutriate samples, and polychaete organisms of the specie Hediste diversicolor and clams R. philippinarum were also exposed for 10 days to estuarine whole sediment. In the fish larvae elutriate test, 100 % mortality was recorded at pH 6.0, after 48 h of exposure. Similar results were obtained in the clam sediment exposure test. In the other organisms, significant mortality (p < 0.05) was observed at pH values lower than 6.0. Very high lethal effects (calculating L[H(+)]50, defined as the H(+) concentration that causes lethal effects in 50 % of the population exposed) were detected in association with the lowest pH treatment for all the species. The implication of these results is that a severe decrease of seawater pH would cause high mortality in marine organisms of several different kinds and life stages. The study addresses the potential risks incurred due to CO(2) leakages in marine environments.


Assuntos
Bivalves , Dióxido de Carbono/química , Sedimentos Geológicos/química , Poliquetos/efeitos dos fármacos , Dourada , Água do Mar/química , Animais , Bioensaio , Disponibilidade Biológica , Concentração de Íons de Hidrogênio , Larva/efeitos dos fármacos , Metais/química , Metais/farmacocinética , Metais/toxicidade , Espanha , Testes de Toxicidade , Poluentes Químicos da Água/química , Poluentes Químicos da Água/farmacocinética , Poluentes Químicos da Água/toxicidade
12.
Artigo em Inglês | MEDLINE | ID: mdl-17768356

RESUMO

Latex from Hevea brasiliensis contains several allergenic proteins that are involved in type I allergy. One of them is Hev b 2, which is a beta-1,3-glucanase enzyme that exists in different isoforms with variable glycosylation content. Two glucanase isoforms were isolated from trees of the GV-42 clone by gel filtration, affinity and ion-exchange chromatography. Isoform I had a carbohydrate content of about 20%, with N-linked N-acetyl-glucosamine, N-acetyl-galactosamine, fucose and galactose residues as the main sugars, while isoform II showed 6% carbohydrate content consisting of N-acetyl-glucosamine, fucose, mannose and xylose. Both isoforms were crystallized by the hanging-drop vapour-diffusion method. Isoform I crystals were grown using 0.2 M trisodium citrate dihydrate, 0.1 M Na HEPES pH 7.5 and 20%(v/v) 2-propanol, but these crystals were not appropriate for data collection. Isoform II crystals were obtained under two conditions and X-ray diffraction data were collected from both. In the first condition (0.2 M trisodium citrate, 0.1 M sodium cacodylate pH 6.5, 30% 2-propanol), crystals belonging to the tetragonal space group P4(1) with unit-cell parameters a = b = 150.17, c = 77.41 A were obtained. In the second condition [0.2 M ammonium acetate, 0.1 M trisodium citrate dihydrate pH 5.6, 30%(w/v) polyethylene glycol 4000] the isoform II crystals belonged to the monoclinic space group P2(1), with unit-cell parameters a = 85.08, b = 89.67, c = 101.80 A, beta = 113.6 degrees. Preliminary analysis suggests that there are four molecules of isoform II in both asymmetric units.


Assuntos
Alérgenos/química , Proteínas de Plantas/química , Alérgenos/genética , Alérgenos/isolamento & purificação , Sequência de Aminoácidos , Antígenos de Plantas , Glicoproteínas/química , Glicoproteínas/isolamento & purificação , Hevea , Dados de Sequência Molecular , Monossacarídeos/análise , Fragmentos de Peptídeos/química , Proteínas de Plantas/genética , Proteínas de Plantas/isolamento & purificação , Polimorfismo Genético , Isoformas de Proteínas/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Difração de Raios X
13.
Acta Crystallogr D Biol Crystallogr ; 59(Pt 9): 1533-8, 2003 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-12925781

RESUMO

In this work, the influence of an internal electric field upon the crystallization of lysozyme and thaumatin is explored using a modified design of the gel-acupuncture setup. From a crystallographic point of view, the orientation of crystals that grow preferentially over different types of electrodes inside capillary tubes is also evaluated. Finally, the crystal quality and the three-dimensional structure of these proteins grown with and without the electric field influence are analyzed by means of X-ray diffraction methods.


Assuntos
Cristalização/métodos , Proteínas/química , Cristalização/instrumentação , Eletroquímica/métodos , Eletrodos , Muramidase/química , Proteínas de Plantas/química , Conformação Proteica , Difração de Raios X/métodos
14.
Rev Neurol ; 32(4): 331-2, 2001.
Artigo em Espanhol | MEDLINE | ID: mdl-11333387

RESUMO

INTRODUCTION AND OBJECTIVE: The fundus oculi is useful for observation of the interior of the eye and the retina. This study establishes a relationship between patients with established cerebral infarcts and the results observed in their fundi. PATIENTS AND METHODS: A retrospective study of the clinical histories of 177 patients seen in the rehabilitation department over a period of one year. RESULTS: The patients were aged between 29 and 85 years. The majority were men; 101 patients (57.06%) had systolic-diastolic arterial hypertension. On study of the fundus oculi there was a predominance of alterations of the blood vessels of the retina due to vascular sclerosis (93.1%) but only 24.4% had frank alterations caused by arterial hypertension. CONCLUSIONS: We found a slight relation between arterial hypertension and the alterations observed in the fundus oculi of these patients.


Assuntos
Fundo de Olho , Hemiplegia/patologia , Oclusão da Artéria Retiniana/patologia , Adulto , Idoso , Idoso de 80 Anos ou mais , Arteriosclerose/epidemiologia , Arteriosclerose/etiologia , Arteriosclerose/patologia , Comorbidade , Cuba/epidemiologia , Retinopatia Diabética/complicações , Retinopatia Diabética/epidemiologia , Retinopatia Diabética/patologia , Feminino , Hemiplegia/epidemiologia , Hemiplegia/etiologia , Humanos , Hipertensão/complicações , Hipertensão/epidemiologia , Masculino , Pessoa de Meia-Idade , Prevalência , Oclusão da Artéria Retiniana/etiologia , Estudos Retrospectivos , Acidente Vascular Cerebral/epidemiologia , Acidente Vascular Cerebral/etiologia
15.
Rev. neurol. (Ed. impr.) ; 32(4): 331-332, 16 feb., 2001.
Artigo em Es | IBECS | ID: ibc-21870

RESUMO

Introducción y objetivos. El fondo de ojo es útil para la observación del interior del ojo y la retina. Este estudio establece la relación entre los pacientes con padecimiento de su primer infarto cerebral establecido y los resultados observables en la realización de sus fondos de ojos. Pacientes y métodos. Estudio retrospectivo de los expedientes clínicos de 177 pacientes ingresados en un servicio de rehabilitación durante un período de 1 año. Resultados. El margen de edades fluctuó entre los 29 y 85 años. El sexo masculino fue el más afectado; 101 pacientes (57,06 por ciento) presentaron cifras de hipertensión arterial sisto-diastólica. En el estudio del fondo de ojo predominaron las alteraciones ocasionadas por esclerosis vascular de los vasos de la retina (93,1 por ciento) y sólo el 24,4 por ciento presentaron alteraciones francamente de hipertensión arterial. Conclusión. Hemos apreciado una pobre relación entre la hipertensión arterial y las alteraciones observadas en el fondo de ojo de estos pacientes (AU)


Assuntos
Pessoa de Meia-Idade , Adulto , Idoso de 80 Anos ou mais , Idoso , Masculino , Feminino , Humanos , Fundo de Olho , Prevalência , Oclusão da Artéria Retiniana , Comorbidade , Estudos Retrospectivos , Acidente Vascular Cerebral , Arteriosclerose , Retinopatia Diabética , Cuba , Hipertensão , Hemiplegia
16.
Glycoconj J ; 18(4): 339-45, 2001 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-11788802

RESUMO

Hevein is an N-acetyl-D-glucosamine (GlcNAc) specific lectin that has been hypothesized to participate in the IgE-mediated allergic reactions in patients with latex allergy. In this work we assessed the specificity and biological effect of hevein purified from rubber latex on human leukocytes, using epifluorescence microscopy and flow cytometry. Purified human granulocytes were stimulated in vitro with hevein, and production of oxidative radicals was measured by reduction of nitroblue tetrazolium formazan. Histochemical staining and flow cytometry showed that hevein recognizes specifically monocytes (CD14+) and neutrophils (CD16+), but not lymphoid cells. Hevein induced oxidative response in purified granulocytes; this effect was 1.3-1.5-fold higher than the effect observed with the lectin WGA (wheat germ agglutinin), or other lectins with different sugar specificity. The induced reactions and cellular recognition by hevein were inhibited with GlcNAc and its oligomers; as well as by glycoproteins containing tri-and tetra-antennary N-glycosydically linked glycans. Our findings suggest that neutrophils are the main target for latex hevein; this lectin induces production of oxidative radicals, which seem to play an important role in tissue damage during latex allergy.


Assuntos
Peptídeos Catiônicos Antimicrobianos , Hipersensibilidade ao Látex/imunologia , Látex/imunologia , Lectinas/imunologia , Neutrófilos/imunologia , Lectinas de Plantas , Proteínas de Plantas/imunologia , Explosão Respiratória , Borracha/química , Carboidratos/análise , Carboidratos/química , Citometria de Fluxo , Humanos , Látex/química , Lectinas/química , Proteínas de Plantas/química , Receptores de IgG/análise
17.
Glycobiology ; 10(10): 993-1000, 2000 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-11030745

RESUMO

A global census of stereochemical metrics including interface size, hydropathy, amino acid propensities, packing and hydrogen bonding was carried out on 32 x-ray-elucidated structures of lectin-carbohydrate complexes covering eight different lectin families. It is shown that the interactions at primary binding subsites are more efficient than at other subsites. Another salient behavior found for primary subsites was a marked negative correlation between the interface size and the polar surface content. It is noteworthy that this demographic rule is delineated by lectins with unrelated phylogenetic origin, indicating that independent interface architectures have evolved through common optimization paths. The structural properties of lectin-carbohydrate interfaces were compared with those characterizing a set of 32 protein homodimers. Overall, the analysis shows that the stereochemical bases of lectin-carbohydrate and protein-protein interfaces differ drastically from each other. In comparison with protein-protein complexes, lectin-carbohydrate interfaces have superior packing efficiency, better hydrogen bonding stereochemistry, and higher interaction cooperativity. A similar conclusion holds in the comparison with protein-protein heterocomplexes. We propose that the energetic consequence of this better interaction geometry is a larger decrease in free energy per unit of area buried, feature that enables lectins and carbohydrates to form stable complexes with relatively small interface areas. These observations lend support to the emerging notion that systems differing from each other in their stereochemical metrics may rely on different energetic bases.


Assuntos
Carboidratos/química , Lectinas/química , Aminoácidos/química , Sítios de Ligação , Metabolismo dos Carboidratos , Sequência de Carboidratos , Simulação por Computador , Bases de Dados Factuais , Dimerização , Ligação de Hidrogênio , Lectinas/metabolismo , Modelos Moleculares , Conformação Molecular , Dados de Sequência Molecular , Ligação Proteica , Propriedades de Superfície , Termodinâmica
18.
Proc Natl Acad Sci U S A ; 96(18): 10062-7, 1999 Aug 31.
Artigo em Inglês | MEDLINE | ID: mdl-10468562

RESUMO

To gain insight into the mechanisms of enzyme catalysis in organic solvents, the x-ray structure of some monomeric enzymes in organic solvents was determined. However, it remained to be explored whether the structure of oligomeric proteins is also amenable to such analysis. The field acquired new perspectives when it was proposed that the x-ray structure of enzymes in nonaqueous media could reveal binding sites for organic solvents that in principle could represent the starting point for drug design. Here, a crystal of the dimeric enzyme triosephosphate isomerase from the pathogenic parasite Trypanosoma cruzi was soaked and diffracted in hexane and its structure solved at 2-A resolution. Its overall structure and the dimer interface were not altered by hexane. However, there were differences in the orientation of the side chains of several amino acids, including that of the catalytic Glu-168 in one of the monomers. No hexane molecules were detected in the active site or in the dimer interface. However, three hexane molecules were identified on the surface of the protein at sites, which in the native crystal did not have water molecules. The number of water molecules in the hexane structure was higher than in the native crystal. Two hexanes localized at <4 A from residues that form the dimer interface; they were in close proximity to a site that has been considered a potential target for drug design.


Assuntos
Triose-Fosfato Isomerase/química , Trypanosoma cruzi/enzimologia , Sequência de Aminoácidos , Animais , Domínio Catalítico , Cristalografia por Raios X , Dimerização , Hexanos , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Solventes
19.
J Biol Chem ; 273(19): 11770-5, 1998 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-9565600

RESUMO

The murine monoclonal IgG1 antibody 7A9 binds specifically to the endothelial leukocyte adhesion molecule-1 (E-selectin), inhibiting the attachment of neutrophils to endothelial cells. The primary and three-dimensional structures of the Fab fragment of 7A9 are reported. The amino acid sequence was determined by automated Edman degradation analysis of proteolytic fragments of both the heavy and light chains of the Fab. The sequences of the two chains are consistent with that of the IgG1 class with an associated kappa light chain with two intrachain disulfide bridges in each of the heavy and light chains. The tertiary structure of the antibody fragment was determined by x-ray crystallographic methods at 2.8 A resolution. The F(ab')2 molecule, treated with dithiothreitol, crystallizes in the space group P2(1) 2(1) 2(1) with unit cell parameters a = 44.5 A, b = 83.8 A, and c = 132.5 A with one Fab molecule in the asymmetric unit. The structure was solved by the molecular replacement method and subsequently refined using simulated annealing followed by conventional least squares optimization of the coordinates. The resulting model has reasonable stereochemistry with an R factor of 0.195. The 7A9 Fab structure has an elbow bend of 162 degrees and is remarkably similar to that of the monoclonal anti-intercellular adhesion molecule-1 (ICAM-1) antibody Fab fragment. The 7A9 antigen combining site presents a groove resembling the structure of the anti-ICAM-1 antibody, and other antibodies raised against surface receptors and peptides. Residues from the six complementary determining regions (CDRs) and framework residues form the floor and walls of the groove that is approximately 22 A wide and 8 A deep and that is lined with many aromatic residues. The groove is large enough to accommodate the loop between beta-strands beta4 and beta5 of the lectin domain of E-selectin that has been implicated in neutrophil adhesion (1).


Assuntos
Anticorpos Monoclonais/ultraestrutura , Sítios de Ligação de Anticorpos , Selectina E/imunologia , Endotélio Vascular/citologia , Fragmentos Fab das Imunoglobulinas/ultraestrutura , Neutrófilos/citologia , Sequência de Aminoácidos , Animais , Adesão Celular , Cristalografia por Raios X , Células HL-60/citologia , Humanos , Molécula 1 de Adesão Intercelular/imunologia , Camundongos , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Rhinovirus/imunologia , Propriedades de Superfície
20.
Glycobiology ; 8(6): 569-77, 1998 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-9592123

RESUMO

The specific interaction of hevein with GlcNAc-containing oligosaccharides has been analyzed by1H-NMR spectroscopy. The association constants for the binding of hevein to a variety of ligands have been estimated from1H-NMR titration experiments. The association constants increase in the order GlcNAc-alpha(1-->6)-Man < GlcNAc < benzyl-beta-GlcNAc < p-nitrophenyl-beta-GlcNAc < chitobiose < p-nitrophenyl-beta-chitobioside < methyl-beta-chitobioside < chitotriose. Entropy and enthalpy of binding for different complexes have been obtained from van't Hoff analysis. The driving force for the binding process is provided by a negative DeltaH0which is partially compensated by negative DeltaS0. These negative signs indicate that hydrogen bonding and van der Waals forces are the major interactions stabilizing the complex. NOESY NMR experiments in water solution provided 475 accurate protein proton-proton distance constraints after employing the MARDIGRAS program. In addition, 15 unambiguous protein/carbohydrate NOEs were detected. All the experimental constraints were used in a refinement protocol including restrained molecular dynamics in order to determine the highly refined solution conformation of this protein-carbohydrate complex. With regard to the NMR structure of the free protein, no important changes in the protein nOe's were observed, indicating that carbohydrate-induced conformational changes are small. The average backbone rmsd of the 20 refined structures was 0.055 nm, while the heavy atom rmsd was 0.116 nm. It can be deduced that both hydrogen bonds and van der Waals contacts confer stability to the complex. A comparison of the three-dimensional structure of hevein in solution to those reported for wheat germ agglutinin (WGA) and hevein itself in the solid state has also been performed. The polypeptide conformation has also been compared to the NMR-derived structure of a smaller antifungical peptide, Ac-AMP2.


Assuntos
Peptídeos Catiônicos Antimicrobianos , Carboidratos/química , Dissacarídeos/química , Lectinas/química , Lectinas de Plantas , Proteínas de Plantas/química , Proteínas/química , Sítios de Ligação , Configuração de Carboidratos , Metabolismo dos Carboidratos , Dissacarídeos/metabolismo , Lectinas/metabolismo , Ligantes , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Proteínas de Plantas/metabolismo , Ligação Proteica , Conformação Proteica , Proteínas/metabolismo
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA
...