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1.
Biodivers Data J ; 12: e106199, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38344169

RESUMO

Background: Incomplete species inventories for Antarctica represent a key challenge for comprehensive ecological research and conservation in the region. Additionally, data required to understand population dynamics, rates of evolution, spatial ranges, functional traits, physiological tolerances and species interactions, all of which are fundamental to disentangle the different functional elements of Antarctic biodiversity, are mostly missing. However, much of the fauna, flora and microbiota in the emerged ice-free land of the continent have an uncertain presence and/or unresolved status, with entire biodiversity compendia of prokaryotic groups (e.g. bacteria) being missing. All the available biodiversity information requires consolidation, cross-validation, re-assessment and steady systematic inclusion in order to create a robust catalogue of biodiversity for the continent. New information: We compiled, completed and revised eukaryotic species inventories present in terrestrial and freshwater ecosystems in Antarctica in a new living database: terrANTALife (version 1.0). The database includes the first integration in a compendium for many groups of eukaryotic microorganisms. We also introduce a first catalogue of amplicon sequence variants (ASVs) of prokaryotic biodiversity. Available compendia and literature to date were searched for Antarctic terrestrial and freshwater species, integrated, taxonomically harmonised and curated by experts to create comprehensive checklists of Antarctic organisms. The final inventories comprises 470 animal species (including vertebrates, free-living invertebrates and parasites), 306 plants (including all Viridiplantae: embryophytes and green algae), 997 fungal species and 434 protists (sensu lato). We also provide a first account for many groups of microorganisms, including non-lichenised fungi and multiple groups of eukaryotic unicellular species (Stramenophila, Alveolata and Rhizaria (SAR), Chromists and Amoeba), jointly referred to as "protists". In addition, we identify 1753 bacterial (obtained from 348117 ASVs) and 34 archaeal genera (from 1848 ASVs), as well as, at least, 14 virus families. We formulate a basic tree of life in Antarctica with the main lineages listed in the region and their "known-accepted-species" numbers.

2.
Ecol Evol ; 13(12): e10786, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38053793

RESUMO

Biodiversity data records contain inaccuracies and biases. To overcome this limitation and establish robust geographic patterns, ecologists often curate records keeping those that are most suitable for their analyses. Yet, this choice is not straightforward and the outcome of the analysis may vary due to a trade-off between data quality and volume. This problem is particularly recurrent for less-studied groups with patchy sampling effort. The latitudinal pattern of mosses richness remains inconsistent across studies and these may emerge purely from sampling artefacts. Our main objective here is to assess the effect of different curation criteria on this spatial pattern in the Temperate Northern Hemisphere (above 20° latitude). We contrasted the geographical distribution of moss species records and the latitude-species richness relation obtained under different data curation scenarios. These scenarios comprehend five sources of taxonomical standardisations and eight data cleaning filters. The analyses are based on the selection of well-surveyed cells at 100 km cell resolution. The application of some 'data curation scenarios' severely affects the number of records selected for analysis and substantially changes the proportion of richness per cell. The sensitivity to data curation becomes detectable at regional and at the cell scales showing a large shift in the latitudinal richness peak in Europe, from 60° N to 45° N latitude, when only preserved specimens are selected and duplicates based on date of collection and coordinates are excluded. Our results stress the importance of justifying the criteria used for filtering biodiversity data retrieved from biodiversity databases to avoid detecting misleading patterns. Curating records under particular criteria compromises the information in some areas displaying different spatial information of mosses. This problem can be ameliorated if data filtering is combined with identifying well-surveyed cells, render relatively constant results under different combinations of filtering even for less well-known groups such as mosses.

3.
Biodivers Data J ; 11: e101000, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38327309

RESUMO

Background: We compiled a database of firefly species records from the Atlantic Forest hotspot in Brazil and made it available at GBIF. Data were gathered from literature and from several key entomological collections, including: Coleção entomológica Prof. José Alfredo Pinheiro Dutra (DZRJ/UFRJ) and Coleção do Laboratório de Ecologia de Insetos from Universidade Federal do Rio de Janeiro (CLEI/UFRJ); Coleção Entomológica do Instituto Oswaldo Cruz (CEIOC); Museu de Zoologia da Universidade de São Paulo (MZSP); Coleção Entomológica Pe. Jesus Santiago Moure from Universidade Federal do Paraná (DZUP/UFPR); and Coleção Entomológica from Universidade Federal Rural de Pernambuco (UFRPE). This database represents the largest contribution to a public repository of recorded occurrences from Neotropical fireflies. New information: This dataset shows the occurrence and abundance of firefly species in the Atlantic Forest hotspot. Firefly species endemic to this biome are also present and considered in the study. These data can assist scientific and societal needs, by supporting future research projects and conservation decision-making.

4.
Nat Ecol Evol ; 5(5): 583-588, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33782579

RESUMO

The divergent nature of evolution suggests that securing the human benefits that are directly provided by biodiversity may require counting on disparate lineages of the Tree of Life. However, quantitative evidence supporting this claim is still tenuous. Here, we draw on a global review of plant-use records demonstrating that maximum levels of phylogenetic diversity capture significantly greater numbers of plant-use records than random selection of taxa. Our study establishes an empirical foundation that links evolutionary history to human wellbeing, and it will serve as a discussion baseline to promote better-grounded accounts of the services that are directly provided by biodiversity.


Assuntos
Biodiversidade , Plantas , Humanos , Filogenia , Plantas/genética
5.
Biodivers Data J ; 8: e53474, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33005091

RESUMO

One of the most valuable initiatives on massive availability of biodiversity data is the Global Biodiversity Information Facility, which is creating new opportunities to develop and test macroecological knowledge. However, the potential uses of these data are limited by the gaps and biases associated to large-scale distributional databases (the so-called Wallacean shortfall). Describing and quantifying these limitations are essential to improve knowledge on biodiversity, especially in poorly-studied groups, such as mosses. Here we assess the coverage of the publicly-available distributional information on Iberian mosses, defining its eventual biases and gaps. For this purpose, we compiled IberBryo v1.0, a database that comprises 82,582 records after processing and checking the geospatial and taxonomical information. Our results show the limitations of data and metadata of the publicly-available information. Particularly, ca. 42% of the records lacked collecting date information, which limits data usefulness for time coverage analyses and enlarges the existing knowledge gaps. Then we evaluated the overall coverage of several aspects of the spatial, temporal and environmental variability of the Iberian Peninsula. Through this assessment, we demonstrate that the publicly-available information on Iberian mosses presents significant biases. Inventory completeness is strongly conditioned by the recorders' survey bias, particularly in northern Portugal and eastern Spain and the spatial pattern of surveys is also biased towards mountains. Besides, the temporal pattern of survey effort intensifies from 1970 onwards, encompassing a progressive increase in the geographic coverage of the Iberian Peninsula. Although we just found 5% of well-surveyed cells of 30' of resolution over the 1970-2018 period, they cover about a fifth of the main climatic gradients of the Iberian Peninsula, which provides a fair - though limited - coverage. Yet, the well-surveyed cells are biased towards anthropised areas and some of them are located in areas under intense land-use changes, mainly due to the wood-fires of the last decade. Despite the overall increase, we found a noticeable gap of information in the south-west of Iberia, the Ebro river basin and the inner plateaus. All these gaps and biases call for a careful use of the available distributional data of Iberian mosses for biogeographical and ecological modelling analysis. Further, our results highlight the necessity of incorporating several good practices to increase the coverage of high-quality information. These good practices include digitalisation of specimens and metadata information, improvement on the protocols to get accurate data and metadata or revisions of the vouchers and recorders' field notebooks. These procedures are essential to improve the quality and coverage of the data. Finally, we also encourage Iberian bryologists to establish a series of re-surveys of classical localities that would allow updating the information on the group, as well as to design their future surveys considering the most important information gaps on IberBryo.

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