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1.
Metabolites ; 14(4)2024 Mar 22.
Artigo em Inglês | MEDLINE | ID: mdl-38668305

RESUMO

In the context of dietary transition toward plant proteins, it is necessary to ensure protein security in populations. It would thus be of interest to identify biomarkers of altered protein digestibility in populations. We examined the association between urinary metabolites and the acute intake of low- or highly digestible protein in healthy volunteers. The urine samples were collected before and 9 h after the ingestion of a meal containing either no protein, zein (low-digestible) or whey protein isolate (highly digestible). The liquid chromatography-high resolution mass spectrometry metabolomics approach was used for the profiling of the urinary metabolites. For the standardization of metabolomics data sets, osmolality-based, standard normal variates (SNV) and probabilistic quotient normalization (PQN) techniques were used. The ANOVA-based factorial method, AComDim_ICA, was used for chemometrics analysis. The osmolality adjustment has a beneficial effect and the subsequent mathematical normalization improves the chemometric analysis further. Some changes in the urinary metabolomes were observed 9 h after the meal in the three groups. However, there was no difference in the urine metabolome between groups. No biomarker of protein digestibility can be identified after the ingestion of a single meal, even when marked differences in the digestion efficiency of protein have been observed.

2.
Chemosphere ; 349: 140824, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38040263

RESUMO

Anaerobic digestion (AD) is a promising waste management strategy that reduces landfilling while generating biogas. Anaerobic co-digestion involves mixing two or more substrates to enhance the nutrient balance required for microorganism growth and thus improve the degradation. Monitoring AD is crucial for comprehending the biological process, optimizing process stability, and achieving efficient biogas production. In this work, we have used three dimensional excitation emission fluorescence spectroscopy and mass spectrometry metabolomics, two complementary techniques, to monitor the anaerobic co-digestion (AcoD) of cellulose, ash wood or oak wood with food waste. The two approaches were compared together and to the biogas production records. Results of this experiment demonstrated the complementarity of both analytical techniques with the measurement of the biogas production since 3D fluorescence spectroscopy and MS metabolomics revealed the earlier molecular changes occurring in the bioreactors, mainly associated with the hydrolysis step, whereas the biogas production data reflected the biological activity in the last step of the digestion. Moreover, in all cases, the three data sets effectively delineated the differences among the substrates. While the two wood substrates were poorly degradable as they were richer in aromatic compounds, cellulose was highly degradable and was characterized by the production of several glycolipids. Then, the three tested AcoDs resulted in a similar 3D EEM fluorescence and metabolomics profiles, close to the one observed for the AD of food waste alone, indicating that the incorporation of the food waste drove the molecular degradation events in the AcoDs. Substrate-specific differences were appreciated from the biogas production data. The overall results of this research are expected to provide insight into the design of guidelines for monitoring AcoD.


Assuntos
Eliminação de Resíduos , Anaerobiose , Alimentos , Biocombustíveis/análise , Espectrometria de Fluorescência , Reatores Biológicos , Perda e Desperdício de Alimentos , Espectrometria de Massas , Digestão , Metano/metabolismo , Esgotos/química
3.
Chem Res Toxicol ; 2023 Sep 20.
Artigo em Inglês | MEDLINE | ID: mdl-37729183

RESUMO

Epidemiological studies aim to assess associations between diseases and risk factors. Such investigations involve a large sample size and require powerful analytical methods to measure the effects of risk factors, resulting in a long analysis time. In this study, chemical exposure markers were detected as the main variables strongly affecting two components coming from a principal component analysis (PCA) exploration of the metabolomic data generated from urinary samples collected on a cohort of about 500 individuals using direct introduction coupled with a Fourier-transform ion cyclotron resonance instrument. The assignment of their chemical identity was first achieved based on their isotopic fine structures detected at very high resolution (Rp > 900,000). Their identification as dimethylbiguanide and sotalol was obtained at level 1, thanks to the available authentic chemical standards, tandem mass spectrometry (MS/MS) experiments, and collision cross section measurements. Epidemiological data confirmed that the subjects discriminated by PCA had declared to be prescribed these drugs for either type II diabetes or cardiac arrhythmia. Concentrations of these drugs in urine samples of interest were also estimated by rapid quantification using an external standard calibration method, direct introduction, and MS/MS experiments. Regression analyses showed a good correlation between the estimated drug concentrations and the scores of individuals distributed on these specific PCs. The detection of these chemical exposure markers proved the potential of the proposed high-throughput approach without any prior drug exposure knowledge as a powerful emerging tool for rapid and large-scale phenotyping of subjects enrolled in epidemiological studies to rapidly characterize the chemical exposome and adherence to medical prescriptions.

4.
J Nutr ; 153(9): 2571-2584, 2023 09.
Artigo em Inglês | MEDLINE | ID: mdl-37394117

RESUMO

BACKGROUND: The consumption of poor-quality protein increases the risk of essential amino acid (EAA) deficiency, particularly for lysine and threonine. Thus, it is necessary to be able to detect easily EAA deficiency. OBJECTIVES: The purpose of this study was to develop metabolomic approaches to identify specific biomarkers for an EAA deficiency, such as lysine and threonine. METHODS: Three experiments were performed on growing rats. In experiment 1, rats were fed for 3 weeks with lysine (L30), or threonine (T53)-deficient gluten diets, or nondeficient gluten diet (LT100) in comparison with the control diet (milk protein, PLT). In experiments 2a and 2b, rats were fed at different concentrations of lysine (L) or threonine (T) deficiency: L/T15, L/T25, L/T40, L/T60, L/T75, P20, L/T100 and L/T170. Twenty-four-hour urine and blood samples from portal vein and vena cava were analyzed using LC-MS. Data from experiment 1 were analyzed by untargeted metabolomic and Independent Component - Discriminant Analysis (ICDA) and data from experiments 2a and 2b by targeted metabolomic and a quantitative Partial Least- Squares (PLS) regression model. Each metabolite identified as significant by PLS or ICDA was then tested by 1-way ANOVA to evaluate the diet effect. A two-phase linear regression analysis was used to determine lysine and threonine requirements. RESULTS: ICDA and PLS found molecules that discriminated between the different diets. A common metabolite, the pipecolate, was identified in experiments 1 and 2a, confirming that it could be specific to lysine deficiency. Another metabolite, taurine, was found in experiments 1 and 2b, so probably specific to threonine deficiency. Pipecolate or taurine breakpoints obtained give a value closed to the values obtained by growth indicators. CONCLUSIONS: Our results showed that the EAA deficiencies influenced the metabolome. Specific urinary biomarkers identified could be easily applied to detect EAA deficiency and to determine which AA is deficient.


Assuntos
Lisina , Desnutrição , Ratos , Animais , Treonina , Taurina , Dieta , Glutens
5.
Molecules ; 27(22)2022 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-36432005

RESUMO

This study presents the kinetic modeling of the natural long-term aging of the pharmaceutical substance as well as the intact tablets of Diclofenac. Datasets are collections of near-infrared spectra acquired from the intact tablets packed in plastic blisters and the spectra of the pure substance. Fresh samples and samples at different stages of degradation are analyzed. No methods of accelerated aging were applied. Multi-step application of MCR-ALS in its soft version followed by the kinetic modeling of the results helps to propose a generic degradation mechanism; which includes: a global kinetic model; approximations of the NIR spectra of the intermediate and product; rough estimates of rate constants. We study tablets in blister packs; exactly as they are presented in pharmacies; and this is important from a practical point of view.


Assuntos
Diclofenaco , Luz , Cinética , Plásticos
6.
Data Brief ; 41: 107960, 2022 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-35242940

RESUMO

Data in this article provides detailed information on the microbial dynamics and degradation performances in two full-scale anaerobic digesters operated in parallel for 476 days. One of them was kept at 35 °C for the whole experiment, while the other was submitted to sub-mesophilic (25 °C) conditions between days 123 and 373. Sludge samples were collected from both digesters at days 0, 80, 177, 218, 281, 353, and 462. The provided data include the operational conditions of the digesters and the characterization of the sludge samples at the physicochemical level, indicative of the digesters' degradation performance. It also includes the characterization of the sludge samples at the multiomics level (16S rRNA gene sequencing, metagenomics, and metabolomics profiling), to decipher the changes in the microbial structure and molecular activity. The 16S rDNA gene sequencing, metagenomics, and metabolomics data were generated using an IonTorrent PGM sequencer, an Illumina NextSeq 500 sequencer, and LTQ-Orbitrap XL mass spectrometer respectively. The 16S rDNA gene raw data and the metagenomics data have been deposited in the BioProject PRJEB49115, in the ENA database (https://www.ebi.ac.uk/ena/browser/view/PRJEB49115). The metabolomics data has been deposited at the Metabolomics Workbench, with study id ST002004 (DOI: 10.21228/M8JM6B). The data can be used as a source for comparisons with other studies working with data from full-scale anaerobic digesters, especially for those investigating the effect of the temperature modification. The data is associated with the research article "Metataxonomics, metagenomics, and metabolomics analysis of the influence of temperature modification in full-scale anaerobic digesters" (Puig-Castellví et al [1]).

7.
Anal Chem ; 94(9): 3997-4004, 2022 03 08.
Artigo em Inglês | MEDLINE | ID: mdl-35201769

RESUMO

Although several successful applications of benchtop nuclear magnetic resonance (NMR) spectroscopy in quantitative mixture analysis exist, the possibility of calibration transfer remains mostly unexplored, especially between high- and low-field NMR. This study investigates for the first time the calibration transfer of partial least squares regressions [weight average molecular weight (Mw) of lignin] between high-field (600 MHz) NMR and benchtop NMR devices (43 and 60 MHz). For the transfer, piecewise direct standardization, calibration transfer based on canonical correlation analysis, and transfer via the extreme learning machine auto-encoder method are employed. Despite the immense resolution difference between high-field and low-field NMR instruments, the results demonstrate that the calibration transfer from high- to low-field is feasible in the case of a physical property, namely, the molecular weight, achieving validation errors close to the original calibration (down to only 1.2 times higher root mean square errors). These results introduce new perspectives for applications of benchtop NMR, in which existing calibrations from expensive high-field instruments can be transferred to cheaper benchtop instruments to economize.


Assuntos
Lignina , Calibragem , Análise dos Mínimos Quadrados , Espectroscopia de Ressonância Magnética , Peso Molecular
8.
Bioresour Technol ; 346: 126612, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-34954354

RESUMO

Full-scale anaerobic digesters' performance is regulated by modifying their operational conditions, but little is known about how these modifications affect their microbiome. In this work, we monitored two originally mesophilic (35 °C) full-scale anaerobic digesters during 476 days. One digester was submitted to sub-mesophilic (25 °C) conditions between days 123 and 373. We characterized the effect of temperature modification using a multi-omics (metataxonomics, metagenomics, and metabolomics) approach. The metataxonomics and metagenomics results revealed that the lower temperature allowed a substantial increase of the sub-dominant bacterial population, destabilizing the microbial community equilibrium and reducing the biogas production. After restoring the initial mesophilic temperature, the bacterial community manifested resilience in terms of microbial structure and functional activity. The metabolomic signature of the sub-mesophilic acclimation was characterized by a rise of amino acids and short peptides, suggesting a protein degradation activity not directed towards biogas production.


Assuntos
Reatores Biológicos , Metagenômica , Anaerobiose , Metabolômica , Metano , Temperatura
9.
Nutrients ; 13(4)2021 Apr 03.
Artigo em Inglês | MEDLINE | ID: mdl-33916877

RESUMO

The western dietary pattern is known for its frequent meals rich in saturated fat and protein, resulting in a postprandial state for a large part of the day. Therefore, our aim was to investigate the postprandial glucose and lipid metabolism in response to high (HP) or normal (NP) protein, high-fat hypercaloric diet and to identify early biomarkers of protein intake and hepatic lipid accumulation. In a crossover design, 17 healthy subjects were randomly assigned to consume a HP or NP hypercaloric diet for two weeks. In parallel, a control group (CD; n = 10) consumed a weight-maintaining control diet. Biomarkers of postprandial lipid and glucose metabolism were measured in 24 h urine and in plasma before and following a meal challenge. The metabolic profile of urine but not plasma, showed increased excretion of 13C, carnitine and short chain acyl-carnitines after adaptation to the HP diet. Urinary excretion of decatrienoylcarnitine and octenoylcarnitine increased after adaptation to the NP diet. Our results suggest that the higher excretion of short-chain urinary acyl-carnitines could facilitate the elimination of excess fat of the HP diet and thereby reduce hepatic fat accumulation previously reported, whereas the higher excretion medium-chains acyl-carnitine could be early biomarkers of hepatic lipid accumulation.


Assuntos
Carnitina/análogos & derivados , Dieta Hiperlipídica/efeitos adversos , Dieta Rica em Proteínas/efeitos adversos , Dieta Ocidental/efeitos adversos , Síndrome Metabólica/diagnóstico , Adulto , Biomarcadores/urina , Carnitina/metabolismo , Carnitina/urina , Estudos Cross-Over , Gorduras na Dieta/efeitos adversos , Gorduras na Dieta/metabolismo , Proteínas Alimentares/metabolismo , Ingestão de Energia/fisiologia , Feminino , Glucose/metabolismo , Voluntários Saudáveis , Humanos , Metabolismo dos Lipídeos/fisiologia , Fígado/metabolismo , Masculino , Síndrome Metabólica/etiologia , Síndrome Metabólica/metabolismo , Síndrome Metabólica/urina , Período Pós-Prandial/fisiologia , Eliminação Renal/fisiologia , Adulto Jovem
10.
Talanta ; 229: 122303, 2021 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-33838766

RESUMO

Chemometrics pre-processing of spectral data is widely performed to enhance the predictive performance of near-infrared (NIR) models related to fresh fruit quality. Pre-processing approaches in the domain of NIR data analysis are used to remove the scattering effects, thus, enhancing the absorption components related to the chemical properties. However, in the case of fresh fruit, both the scattering and absorption properties are of key interest as they jointly explain the physicochemical state of a fruit. Therefore, pre-processing data that reduces the scattering information in the spectra may lead to poorly performing models. The objectives of this study are to test two hypotheses to explore the effect of pre-processing on NIR spectra of fresh fruit. The first hypothesis is that the pre-processing of NIR spectra with scatter correction techniques can reduce the predictive performance of models as the scatter correction can reduce the useful scattering information correlated to the property of interest. The second hypothesis is that the Deep Learning (DL) can model the raw absorbance data (mix of scattering and absorption) much more efficiently than the Partial Least Squares (PLS) regression analysis. To test the hypotheses, a real NIR data set related to dry matter (DM) prediction in mango fruit was used. The dataset consisted of a total of 11,420 NIR spectra and reference DM measurements for model training and independent testing. The chemometric pre-processing methods explored were standard normal variate (SNV), variable sorting for normalization (VSN), Savitzky-Golay based 2nd derivative and their combinations. Further two modelling approaches i.e., PLS regression and DL were used to evaluate the effect of pre-processing. The results showed that the best root mean squared error of prediction (RMSEP) for both the PLS and DL models were obtained with the raw absorbance data. The spectral pre-processing in general decreased the performance of both the PLS and DL models. Further, the DL model attained the lowest RMSEP of 0.76%, which was 13% lower compared to the PLS regression on the raw absorbance data. Pre-processing approaches should be carefully used while analysing the NIR data related to fresh fruit.

11.
PLoS One ; 15(5): e0232324, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32357180

RESUMO

Anaerobic digestion (AD) is used to minimize solid waste while producing biogas by the action of microorganisms. To give an insight into the underlying microbial dynamics in anaerobic digesters, we investigated two different AD systems (wastewater sludge mixed with either fish or grass waste). The microbial activity was characterized by 16S RNA sequencing. 16S data is sparse and dispersed, and existent data analysis methods do not take into account this complexity nor the potential microbial interactions. In this line, we proposed a data pre-processing pipeline addressing these issues while not restricting only to the most abundant microorganisms. The data were analyzed by Common Components Analysis (CCA) to decipher the effect of substrate composition on the microorganisms. CCA results hinted the relationships between the microorganisms responding similarly to the AD physicochemical parameters. Thus, in overall, CCA allowed a better understanding of the inter-species interactions within microbial communities.


Assuntos
Archaea/metabolismo , Bactérias/metabolismo , Esgotos/microbiologia , Anaerobiose , Archaea/isolamento & purificação , Bactérias/isolamento & purificação , Biodiversidade , Análise de Dados , Pesqueiros , Interações Microbianas , RNA Bacteriano , RNA Ribossômico 16S , Estatística como Assunto
12.
Chemosphere ; 254: 126812, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32335442

RESUMO

Anaerobic co-digestion (AcoD) can increase methane production of anaerobic digesters in plants treating wastewater sludge by improving the nutrient balance needed for the microorganisms to grow in the digesters, resulting in a faster process stabilization. Substrate mixture proportions are usually optimized in terms of biogas production, while the metabolic biodegradability of the whole mixture is neglected in this optimisation. In this aim, we developed a strategy to assess AcoD using metabolomics data. This strategy was explored in two different systems. Specifically, we investigated the co-digestion of wastewater sludge with different proportions of either grass or fish waste using untargeted High Performance Liquid Chromatography coupled to Mass Spectrometry (HPLC-MS) metabolomics and chemometrics methods. The analysis of these data revealed that adding grass waste did not improve the metabolic biodegradability of wastewater sludge. Conversely, a synergistic effect in the metabolic biodegradability was observed when fish waste was used, this effect being the highest for 25% of fish waste. In conclusion, metabolomics can be regarded as a promising tool both for characterizing the biochemical processes occurring during anaerobic digestion, and for providing a better understanding of the anaerobic digestion processes.


Assuntos
Eliminação de Resíduos Líquidos/métodos , Anaerobiose , Biodegradação Ambiental , Biocombustíveis/análise , Reatores Biológicos , Metabolômica , Metano/análise , Esgotos/química , Águas Residuárias/análise
13.
J Agric Food Chem ; 68(47): 13331-13343, 2020 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-32066244

RESUMO

This work investigated the influence of grape variety, vineyard location, and grape harvest maturity, combined with different oxygen availability treatments, on red wine composition during bottle aging. Chemometric analysis of wine compositional data (i.e., wine color parameters, SO2, metals, and volatile compounds) demonstrated that the wine samples could be differentiated according to the different viticultural or bottle-aging factors. Grape variety, vineyard location, and grape maturity showed greater influence on wine composition than bottle-aging conditions. For most measured wine compositional variables, the evolution patterns adopted from the viticultural factors were not altered by oxygen availability treatment. However, contrasting evolution patterns for some variables were observed according to specific viticultural factors, with examples including dimethyl sulfide, phenylacetaldehyde, maltol, and ß-damascenone for vineyard locations, 2-methylbutanal, 1,4-cineole, and linalool for grape variety, and methanethiol, methional, and homofuraneol for grape maturity.


Assuntos
Oxigênio/análise , Vitis/química , Vinho/análise , Acetaldeído/análogos & derivados , Aromatizantes/química , Manipulação de Alimentos , Frutas/química , Norisoprenoides/análise , Pironas/análise , Sulfetos/análise , Fatores de Tempo
14.
Talanta ; 208: 120451, 2020 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-31816793

RESUMO

Independent components analysis (ICA) is a probabilistic method, whose goal is to extract underlying component signals, that are maximally independent and non-Gaussian, from mixed observed signals. Since the data acquired in many applications in analytical chemistry are mixtures of component signals, such a method is of great interest. In this article recent ICA applications for quantitative and qualitative analysis in analytical chemistry are reviewed. The following experimental techniques are covered: fluorescence, UV-VIS, NMR, vibrational spectroscopies as well as chromatographic profiles. Furthermore, we reviewed ICA as a preprocessing tool as well as existing hybrid ICA-based multivariate approaches. Finally, further research directions are proposed. Our review shows that ICA is starting to play an important role in analytical chemistry, and this will definitely increase in the future.

15.
Forensic Sci Int ; 301: 190-201, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31174133

RESUMO

The source inference of ignitable liquids in forensic science is still a challenging and ongoing research area. In real case applications, specimens of different natures, which may have been exposed to fire or not, may have to be compared. These comparisons are difficult since specimens may have been altered by evaporation, combustion or both. Plus, the extent of the alteration is often difficult to evaluate. Most studies concerning source inference of ignitable liquids worked on neat samples or samples altered by evaporation. However, there is a lack of studies comparing the influence of evaporation and combustion within a source inference framework. In this study, the same collection of gasoline samples was altered by both evaporation under a nitrogen stream and combustion of the gasoline adsorbed on a matrix. The possibility to link gasoline samples sharing a common source was then explored using an adaptive untargeted chemometrics workflow from feature detection to feature selection. This data treatment approach was successfully applied to the data and it was shown that the possibility to link samples with a common source was not compromised despite evaporation or combustion for degrees of alteration from 0% to 99%.

16.
Int J Mol Sci ; 20(5)2019 Feb 27.
Artigo em Inglês | MEDLINE | ID: mdl-30818755

RESUMO

Origanum ehrenbergii Boiss., an endemic plant to Lebanon, is widely acknowledged in Lebanese traditional medicine. The aim of the present study was to evaluate the influence of the drying method, region, and time of harvest on yield and chemical composition of O. ehrenbergii essential oils (EOs). Plants were harvested monthly throughout 2013 and 2014, from two different regions, Aabadiye and Qartaba, then dried using two drying methods: lyophilization and shade-drying at 4 °C. EO was extracted by hydrodistillation and analyzed by GC/MS. GC-MS data, combined with independent component analysis (ICA) and common component and specific weight analysis (CCSWA), showed that drying techniques, region of harvest, and soil composition have no effect on the chemical composition of O. ehrenbergii EOs. Of the factors analyzed, only harvesting time affected the EO composition of this species. High and stable amounts of carvacrol, associated with reliable antimicrobial activities, were detected in material harvested between March and October. EOs obtained from plants harvested in Aabadiye in January and February showed high amounts of thymoquinone, related to anti-inflammatory and cytotoxic effects. The use of ICA and CCSWA was proven to be efficient, and allowed the development of a discriminant model for the classification of O. ehrenbergii chemotype and the determination of the best harvesting time.


Assuntos
Óleos Voláteis/análise , Óleos Voláteis/química , Origanum/química , Altitude , Dessecação , Análise Discriminante , Geografia , Líbano , Análise de Componente Principal , Solo , Fatores de Tempo
17.
Talanta ; 194: 205-225, 2019 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-30609523

RESUMO

MATLAB (MATrix LABoratory) is a multi-paradigm numerical computing environment and fourth-generation programming language. MATLAB allows matrix manipulations, plotting of functions and data, implementation of algorithms, creation of user interfaces and interfacing with programs written in other languages, including C, C++, Java, Fortran and Python. Electrochemistry is a branch of chemistry that studies the relationship between electricity, as a measurable and quantitative phenomenon, and identifiable chemical change, with either electricity considered an outcome of a particular chemical change or vice versa. MATLAB has obtained a wide range of applications in different fields of science and electrochemists are also using it for solving their problems which can help them to obtain more quantitative and qualitative information about systems under their studies. In this review, we are going to cast a look on different applications of MATLAB in electrochemistry and for each section, a number of selected articles published in the literature will be discussed and finally, the results will be summarized and concluded.

18.
Mol Nutr Food Res ; 63(1): e1700834, 2019 01.
Artigo em Inglês | MEDLINE | ID: mdl-29468821

RESUMO

SCOPE: The impact of meat consumption on human health is widely examined in nutritional epidemiological studies, especially due to the connection between the consumption of red and processed meat and the risk of colon cancer. Food questionnaires do not assess the exposure to different methods of meat cooking. This study aimed to identify biomarkers of the acute ingestion of bovine meat cooked with two different processes. METHODS AND RESULTS: Non-targeted UPLC-MS metabolite profiling was done on urine samples obtained from 24 healthy volunteers before and 8 h after the ingestion of a single meal composed of intrinsically 15 N labelled bovine meat, either cooked at 55 °C for 5 min or at 90 °C for 30 min. A discriminant analysis extension of independent components analysis was applied to the mass spectral data. After meat ingestion, the urinary excretion of 1-methylhistidine, phenylacetylglutamine, and short- and medium-chained acylcarnitines was observed. 15 N labelling was detected in these metabolites, thus confirming their origin from ingested meat. However, no difference was observed in urinary metabolomic profiles according to the meat cooking process used. CONCLUSION: Meat ingestion led to the excretion of several nitrogen-containing compounds, but although a metabolic signature was detected for meat ingestion, the impact of the cooking process was not detectable at the level of urinary metabolic signature in our experimental conditions.


Assuntos
Biomarcadores/urina , Carne Vermelha , Urina/química , Acetilcarnitina/urina , Adulto , Animais , Bovinos , Cromatografia Líquida de Alta Pressão/métodos , Culinária , Ingestão de Alimentos , Feminino , Glutamina/análogos & derivados , Glutamina/urina , Voluntários Saudáveis , Humanos , Masculino , Metaboloma , Metilistidinas/urina , Isótopos de Nitrogênio/urina , Espectrometria de Massas em Tandem/métodos
19.
Eur J Mass Spectrom (Chichester) ; 25(2): 251-258, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30335517

RESUMO

Direct injection-mass spectrometry can be used to perform high-throughput metabolomic fingerprinting. This work aims to evaluate a global analytical workflow in terms of sample preparation (urine sample dilution), high-resolution detection (quality of generated data based on criteria such as mass measurement accuracy and detection sensitivity) and data analysis using dedicated bioinformatics tools. Investigation was performed on a large number of biological samples collected from sheep infected or not with scrapie. Direct injection-mass spectrometry approach is usually affected by matrix effects, eventually hampering detection of some relevant biomarkers. Reference compounds were spiked in biological samples to help evaluate the quality of direct injection-mass spectrometry data produced by Fourier Transform mass spectrometry. Despite the potential of high-resolution detection, some drawbacks still remain. The most critical is the presence of matrix effects, which could be minimized by optimizing the sample dilution factor. The data quality in terms of mass measurement accuracy and reproducible intensity was evaluated. Good repeatability was obtained for the chosen dilution factor (i.e., 2000). More than 150 analyses were performed in less than 16 hours using the optimized direct injection-mass spectrometry approach. Discrimination of different status of sheeps in relation to scrapie infection (i.e., scrapie-affected, preclinical scrapie or healthy) was obtained from the application of Shrinkage Discriminant Analysis to the direct injection-mass spectrometry data. The most relevant variables related to this discrimination were selected and annotated. This study demonstrated that the choice of appropriated dilution faction is indispensable for producing quality and informative direct injection-mass spectrometry data. Successful application of direct injection-mass spectrometry approach for high throughput analysis of a large number of biological samples constitutes the proof of the concept.


Assuntos
Ensaios de Triagem em Larga Escala/métodos , Espectrometria de Massas/métodos , Metabolômica/métodos , Scrapie/urina , Animais , Biomarcadores/urina , Feminino , Ensaios de Triagem em Larga Escala/instrumentação , Espectrometria de Massas/instrumentação , Metabolômica/instrumentação , Scrapie/diagnóstico , Ovinos , Urina/química
20.
Forensic Sci Int ; 295: 8-18, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30553191

RESUMO

Recent research efforts in the domain of fire debris analysis have been mainly oriented towards the development of innovative analytical procedures and chemometric approaches for the detection and classification of ignitable liquids in fire specimens according to the ASTM E1618. However, less attention has been brought to the question of the source inference of ignitable liquids. Infer the identity of source of ignitable liquids recovered from arson sites is still a challenging and ongoing research area. In this study, the objective is to link neat gasoline samples sharing a common source through the use of an untargeted chemometric approach applied to data acquired by automated thermodesorption (ATD)-GC-MS following passive headspace extraction onto Tenax TA tubes. To that end, 190 unique gasoline samples from 19 gas stations collected over a year were used. A general and automated chemometric methodology for data treatment involving the following main steps is proposed: feature detection, normalization by exhaustive calculation of ratios between areas of pairs of features and selection of most discriminant ratios. The ratio selection procedure used here is based on the calculation of similarity measurements between pairs of samples sharing a common source or not. The algorithm maximizes the separation of the distributions of similarity measurements for related and unrelated samples by selecting a subset of ratios maximizing the area under the Receiver Operating Characteristics curve. The approach presented here was successfully applied to neat gasoline samples in order to assess if two gasoline samples share a common source or not.

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