Farm management and economic factors associated with bulk tank total bacterial count in Holstein dairy herds in Iran.

The objectives of this research were (1) to study different factors affecting milk total bacterial count (TBC) and (2) to estimate the economic value associated with TBC in Holstein dairy herds in Iran. The relationships between bulk tank TBC and farm management and economic factors were examined on 56 randomly selected intensive dairy farms. Herd management factors associated with bulk tank TBC were determined using mixed linear models. The median bulk tank TBC for the sample herds was 299 (range 81-1185) × 103 cfu/ml. The average economic premium opportunity from bulk tank TBC was US$ 1.32 per ton of milk ranging from US$ 0.02 per ton of milk for herds applying wet tissue procedures as teat cleaning material and washing the water troughs three times per day to US$ 5.20 per ton of milk for herds with dirty barns. Results showed that the following management factors were associated with low TBC and high economic value: frequency of cleaning water troughs, teat cleaning material, the frequency of milk delivery to the processor, bedding material, herd size, education level of workers, udder washing material, material of milking parlor wall, frequency of disinfection of the calving area, presence of veterinarian, water quality control, having a hospital pen and barn hygiene. In conclusion, our findings highlight the need to pay more attention to farm management issues, particularly farm hygiene practices to reduce milk TBC and so reduce the economic burden of TBC in dairy herds in Iran.

Implementation of Feed Efficiency in Iranian Holstein Breeding Program.

This study aimed to evaluate the economic impact of improving feed efficiency on breeding objectives for Iranian Holsteins. Production and economic data from seven dairy herds were used to estimate the economic values of different traits, and a meta-analysis was conducted to analyze the genetic relationships between feed efficiency and other traits. Economic weights were calculated for various traits, with mean values per cow and per year across herds estimated at USD 0.34/kg for milk yield, USD 6.93/kg for fat yield, USD 5.53/kg for protein yield, USD -1.68/kg for dry matter intake, USD -1.70/kg for residual feed intake, USD 0.47/month for productive life, and USD -2.71/day for days open. The Iranian selection index was revised to improve feed efficiency, and the feed efficiency sub-index (FE$) introduced by the Holstein Association of the United States of America was adopted to reflect Iran's economic and production systems. However, there were discrepancies between Iranian and US genetic coefficients in the sub-index, which could be attributed to differences in genetic and phenotypic parameters, as well as the economic value of each trait. More accurate estimates of economic values for each trait in FE$ could be obtained by collecting dry matter intake from Iranian herds and conducting genetic evaluations for residual feed intake.

Genetic analysis of retained placenta and its association with reproductive disorder, production, and fertility traits of Iranian Holstein dairy cows.

To facilitate breeding for improved resistance to the reproductive disorder of retained placenta (RP), genetic parameters were estimated for RP and its genetic correlation with other reproductive disorders as well as with production and fertility traits of Iranian Holstein dairy cows. Data were 154,048 lactation records collected between 2011 and 2018 from 59,610 Holstein dairy cows in 9 Iranian herds. Other reproductive disorders included dystocia, stillbirth, and twinning. Fertility records were available for days from calving to first service (DFS), days open (DO), number of inseminations per conception (NIC), and success of first insemination (SFI). Genetic parameters for RP were estimated using univariate linear and logistic animal models with ASREML software. The univariate linear animal model was used to implement bivariate analysis to investigate potential genetic correlations of RP with other reproductive disorders and with production and fertility traits. Heritability estimates for RP were low from both linear (0.031) and logistic (0.092) animal models. Estimated genetic correlations with RP were -0.04 for twinning, 0.32 for stillbirth, and 0.34 for dystocia, which indicates that selection against RP could indirectly select against dystocia and stillbirth. Estimated genetic correlations between RP and production traits (milk, fat, and protein yields) at 100, 200, and 305 d in milk ranged from -0.12 to -0.29; the greatest correlation (-0.29) was for the first 100 d in milk. A moderate positive genetic correlation (0.25) was found for RP and DO, DFS, and NIC, whereas a low negative genetic correlation (-0.09) was found between RP and SFI. The pedigree-based genetic analysis of RP showed that this trait has a low heritability, is linked to other reproductive disorders, and generally has an unfavorable relationship with production and fertility traits. Selection against RP can reduce the incidence of reproductive disorders and improve fertility and production traits.

Assessing the consequences and economic impact of retained placenta in Holstein dairy cattle.

Retained placenta (RP) is as an important reproductive disorder which adversely affects the economic performance of dairy cows. Understanding the consequences and economic losses associated with RP can persuade dairy farmers to consider it more effectively in their management decisions. Hence, the aims of this research were to assess the effect of RP on production and reproduction attributes as well as economic losses in Iranian Holstein cows. The data was collected from nine Holstein dairy herds in Isfahan province of Iran. The final dataset comprised of 139,508 records of 58,086 cows which calved between March 2011 and December 2018. A linear mixed model was developed to evaluate the effect of RP on individual performance of primiparous and multiparous cows. The economic losses associated with the RP were finally estimated. The average incidence of RP per cow over a year was 12.3% (ranged between 9.0 and 15.4%). Each incidence of RP significantly reduced milk, fat and protein yields in primiparous and multiparous cows (P < 0.05). The adverse effect of RP on the milk production was much higher in the cows at the early phase of lactation (i.e. 100-d lactation group) than the cows in mid or late lactation. The estimated production losses (±standard deviation) due to the RP event were 282.1 ± 43.0 and 295.7 ± 40.8 kg per cow for a 305-d lactation period in primiparous and multiparous cows, respectively. However, the fertility performance was less affected by the RP in primiparous compared to multiparous cows. The average of days open increased by 8.3 ± 5.3 and 19.8 ± 7.1 d in primiparous and multiparous cows, respectively. The financial losses associated with RP were on average US$ 350.4 and US$ 481.2 per incidence in primiparous and multiparous cows, respectively, ranged from US$ 311.9 to 456.2 depending on the parity number (primi- or multiparous) and herd management. The highest financial losses due to RP were associated with reduction in milk production (38.5% of total loss) and low fertility (28.5% of total loss) had the highest contribution in in primiparous and multiparous cows, respectively. The results of our research highlight the economic importance of improved calving management to reduce RP occurrence in dairy cows.

Low potassium diets with different levels of calcium in comparison with different anionic diets fed to prepartum dairy cows: Effects on sorting behaviour, total tract digestibility, energy metabolism, oxidative status and hormonal response.

This study investigated the effects of low potassium diets with different levels of Ca compared to two diets low in dietary cation-anion difference (DCAD) fed prepartum as a strategy to prevent hypocalcemia on sorting behaviour, total tract digestibility, oxidative status and energy and protein metabolism of transition cows. Forty-eight pregnant dairy cows were assigned to 4 treatment groups: Low Ca, low K (LCLK), High Ca, low K (HCLK), Supplementation with anionic mineral mixture (AMS) supplementation with SoyChlor (CAS). After parturition, all animals were fed a standard postpartum diet. Data were collected until 21 DIM. Prepartum urinary pH was significantly reduced by the low DCAD diets, while postpartum Ca homeostasis was affected by the HCLK ration. Feeding AMS induced sorting against particles <1.18 mm in favour of particles >19 mm prepartum. In contrast, cows fed CAS showed an increase in selective consumption of fine particles and sorted against longer particles similar to the HCLK and LCLK groups. Postpartum sorting activity was not affected by the dietary treatments. After calving, apparent digestibility of NDF was significantly reduced in the HCLK group. Prepartum, we observed effects on serum concentrations of non-esterified fatty acids were higher and insulin sensitivity was lower in the AMS group. Blood urea nitrogen (BUN) was decreased in cows fed the CAS ration. Postpartum, we found serum protein to be decreased with the low DCAD diets while BUN was decreased in the CAS group. The low DCAD rations increased prepartum serum malondialdehyde concentrations, while postpartum total antioxidant capacity was lower in the HCLK and the AMS group. From these data, we conclude that AMS decreased prepartum intake due to compromised palatability. Intermediate protein metabolism was affected by the low DCAD diets, while parameters of oxidative stress were probably affected by acid-base balance and Ca homeostasis.

Farm and cow factors and their interactions on the incidence of retained placenta in holstein dairy cows.

Risk factors for retained placenta (RP), as a common and economically important disorder, have been widely investigated. However, comprehensive studies are rare. Therefore, this study sought to identify herd-cow factors and their interactions on the risk of RP in Iranian dairy herds. The data were collected from nine Holstein dairy herds in Isfahan province, Iran. The final dataset included 154,048 records for 59,610 cows which calved between March 2011 and December 2018. A logistic regression model was used to separately analyze the risk factors and their interactions for RP in primiparous and multiparous cows. The average rate of RP was 12.3% (9.0-15.4%) at the herd level. The highest rate of RP was recorded in spring compared with other seasons. Regardless of calving season, occurrence of dystocia, stillbirth and twinning increased the odds ratio (OR) of RP. In primiparous cows, occurrence of dystocia and stillbirth increased OR of RP 4.30 and 3.33 times, respectively. In multiparous cows, dystocia, twinning and stillbirth increased OR of RP 4.36, 3.94 and 1.29 times, respectively. Cows with an age at first calving of >28 months had the highest rate of RP compared with other cows. Multiparous and primiparous cows with a short (less than 271 d) and long (more than 281 d) pregnancy, respectively, had the highest risk of RP compared to cows in other groups. Furthermore, multiparous cows with an extended dry period length (more than 75 d) and produced milk yield more than 13,000 kg/lactation were at higher risk of RP with an average of 13.5%. With an interaction analysis, although the potential effect of each factors depends on the effect of other factors, but in general dystocia, stillbirth, an extended age at first calving (>28 months), and calving during the spring increased risk of RP for both groups. In conclusion, identification of risk factors for RP with an interaction analysis can help farm managers to employ the best strategies to reduce the occurrence of this reproductive disorder.

Impact of a Ration Negative in Dietary Cation-Anion Difference and Varying Calcium Supply Fed before Calving on Colostrum Quality of the Dams and Health Status and Growth Performance of the Calves.

This study investigated the effect of diets negative in dietary cation-anion difference (DCAD) or restricted in Ca fed prepartum to dairy cows for three weeks on colostrum yield and composition, and the health and growth performance of their calves. Thirty-six pregnant non-lactating Holstein-Friesian cows were randomly assigned to three isoenergetic diets: (1) low Ca: 0.24% Ca, DCAD: +86 mEq/kg; (2) high Ca: 1.23% Ca, DCAD: +95 mEq/kg; and (3) low DCAD: 1.28% Ca, DCAD: -115 mEq/kg (all dry matter (DM) basis). While colostrum quality was not affected, low Ca supply prepartum tended to increase the colostrum yield compared to high Ca (low Ca = 8.81 vs. high Ca = 5.39 kg). However, calves from cows fed low DCAD showed higher serum concentrations of K, lower body weight (BW), starter feed intake and average daily weight gain before weaning compared to low Ca and high Ca calves (53.12 vs. 57.68 and 57.32 kg) but BW was similar postweaning (d 70). In addition, calves from dams fed low DCAD were more likely to develop diarrhea and had increased number of days with abnormal fecal scores. Consequently, calves from low DCAD dams had to be treated more frequently.

Effect of abortion on milk production, health, and reproductive performance of Holstein dairy cattle.

The objective of this study was to identify the effect of abortion on performance of Iranian Holstein cows that calved between 2005-2014. Abortion records were categorized in two groups: 1) new abortion (NLA), and 2) rebreeding abortion (RA). Production data (305-d milk, fat, and protein yields) were analyzed using PROC MIXED, number of inseminations per lactation period (INS), postpartum health disorders (PPHD), and culling records using PROC GLIMMIX, and calving to conception records using PROC PHREG of SAS software (SAS Institute, 2013). For each separate model, main herd-cow factors and all two-way significant interactions were considered in the analyses with results being reported for each calving status by lactation period. In total, 12.5 % of lactation periods were associated with at least one case of abortion, while 1.9 % of the lactation periods commenced with an abortion. Based on results from the present study, milk production decreased for cows having abortion classified as NLA or RA. Overall, when there was a RA, there was an increase in median days non-pregnant (DNP) by 132 d and INS by 1.6, whereas cows with NLA had median DNP of 15 d less and an INS of 0.17 less than cows with normal parturitions. Compared with cows with normal parturitions, cows with a NLA were 1.24, 1.88, and 2.41 times more likely to have PPHD, and be culled from the herd for involuntary reasons and reasons related to reproduction, respectively. The results of this study indicate abortions were associated with cow health and milk production and reproductive performance, indicating losses due to abortion are not only a direct result of the loss of a pregnancy.

Machine learning algorithms, bull genetic information, and imbalanced datasets used in abortion incidence prediction models for Iranian Holstein dairy cattle.

The ability to predict abortion incidence, especially in regions with high abortion rates (e.g., Iran), helps improve reproductive performance and, thereby, dairy farm profitability. The objective of this study was to predict pregnancy loss in Iranian dairy herds. For this purpose, the cow history records and bull genetic information available at 6 large commercial dairy farms with cows calved between 2005 and 2014 were extracted from an on-farm record-keeping software. Using WEKA, 12 commonly used machine learning (ML) algorithms were applied to the dataset. The algorithms belonged to 5 classifier groups which were Bayes, meta, functions, rules, and trees. The original dataset including herd-cow factors was randomly divided into 2 subsets: a training dataset and a test one (at a ratio of 60:40). The original dataset was combined with the bull genetic information to create a full dataset. The average abortion rate was 15.4 %, which represented an imbalanced dataset. Therefore, 2 down- and up-sampling techniques were additionally implemented on the original dataset (more specifically on the training one) to create 2 balanced datasets. This ultimately yielded 4 datasets; original, full, down-sampling, and up-sampling. Different algorithms and models were evaluated based on F-measure and area under the curve (AUC). Based on the results obtained, ML algorithms exhibited a high performance in predicting abortion when applied to the balanced dataset. However, their performance varied from 32.3 % (poor) to 69.2 % (medium upward) when applied to the imbalanced original dataset. In addition to the imbalance in the original dataset, the reason for these poor results were attributed to the high proportion of unknown risk factors underlying abortion incidence. Even when including the bull genetic information, it did not lead to any significant improvements in the prediction model. From among the datasets used, the Bayes algorithms outperformed the others in predicting pregnancy losses while rules had the worst performance. Furthermore, while the Bayes algorithms were not affected by the type of dataset (balanced or imbalanced), substantial increases in F-measure and AUC were observed for rules, trees, and functions with balanced datasets. Overall, the balanced models outperformed the others, with the down-sampling method exhibiting the highest performance. Despite the fact that the prediction models used in this study did not perform as expected, it was shown that they can be beneficially used to predict and reduce pregnancy losses, despite their moderate accuracy, especially when used for herds with high abortion rates and low reproductive performances.

Effect of production level and source of fat supplement on performance, nutrient digestibility and blood parameters of heat-stressed Holstein cows.

The interactive effect of dietary fat supplementation and milk yield level on dairy cows performance under heat stress has not been thoroughly investigated. The purpose of this study was to evaluate the effect of production level, the source of fat supplements and their interaction on dairy cows performance under heat stress. In this study, 64 Holstein multiparous cows were divided into 2 groups and received one of two rations having either calcium salts of fatty acids (Ca-FA) or high-palmitic acid (PA) supplements (2.8% of DM; dry matter). After completing the experiment and based on maturity-equivalent milk, cows were divided into two groups of high-yielding (14,633 kg) and medium-yielding (11,616 kg). Average temperature humidity index (THI) was 71 during the trial period. Apparent digestibility of dry matter (p = 0.04), organic matter (p = 0.05), and neutral detergent fiber (NDF; p = 0.04) for cows fed Ca-FA were greater than cows fed PA. The milk fat content in high-producing cows was 0.3% greater than medium-producing cows (p = 0.03). The milk protein content in cows fed Ca-FA was greater than cows fed PA (p < 0.01). High-producing cows had greater serum cholesterol (p = 0.02) than medium-producing cows. The cows fed PA tended to have a greater BUN than cows fed Ca-FA (p = 0.06). Alanine aminotransferase and aspartate aminotransferase tended to be increased by PA, which indicates that cows in PA treatment may have experienced more adverse effect on the liver function than cows on Ca-FA. Therefore, under heat stress and in 90 d trial, milk production level does not affect the cows' response to PA or Ca-FA. Although cows fed Ca-FA received lower energy than those fed PA, they compensated for this shortage likely with increasing the digestibility and produced a similar amount of milk.

Substitution of corn silage with shredded beet pulp affects sorting behaviour and chewing activity of dairy cows.

This study aims to evaluate the effects of substituting increasing concentrations of shredded beet pulp (SBP) for corn silage (CS) on nutrient intake, sorting index, intakes of particle size and nutrients, meal and rumination patterns, and chewing activity of dairy cows. Four multiparous (126 ± 13 day in milk) and 4 primiparous (121 ± 11 day in milk) Holstein cows were used in a 4 × 4 Latin square design experiment with 4 periods of 21 days. Dietary treatments were (DM basis): 16% of dietary DM as CS without SBP (0SBP); 8% CS and 8% SBP (8SBP); 4% CS and 12% SBP (12SBP); and 0% CS and 16% SBP (16SBP). We observed a reduction in the extent of sorting against long particles and medium particles but for fine particles with increasing SBP levels in the diets. The number of eating bouts per day was lesser (8.2%) in cows fed SBP diets compared with 0SBP cows and corresponded with a reduction in eating time per d across treatments. The number of ruminating bouts per day was similar across diets (16.8 bouts/day), but substituting SBP for CS in the diets tended to decrease linearly ruminating bout length (5 min/bout) and tended to increase ruminating bout interval (8 min/day). Eating, ruminating and total chewing time when expressed as minutes per kilogram of forage NDF intake and peNDF > 8 intake increased when SBP was substituted for CS in the diets. Primiparous cows had greater ruminating time (57 m/day) and total chewing time (73 min/day), eating rate (0.01 kg of DM/min) compared with multiparous cows. Also, increasing forage NDF and peNDF>8 , >8-mm DM intakes are effective means of stimulating ruminating and chewing activities. This study showed that SBP could partially replace CS and not affect DM intake, but chewing activity may decrease slightly.

Economic evaluation of sexed semen use in Iranian dairy farms according to field data.

In this study, at first, the reproductive consequences of sexed semen use were quantified and then the cost-benefit of sexed semen use on Iranian commercial dairy farms was evaluated. Retrospective data collected during 2006 to 2013 from four large dairy farms in the Isfahan province of Iran were used for this study. These data included of 13,003 heifers records, from which 11.2% used sexed semen from 33 different bulls. All data were analysed using a multivariable logistical regression model, GENMOD procedure from SAS software. The analyses included economic values (EVs) when sexed semen was used in 1, 2 and 3 consecutive services compared with conventional semen use for all insemination. Results showed that rates of female born from sexed semen (86.3%) were 1.8 times higher than those from conventional semen (48.5%). Conception rates were 43.8% for sexed and 59.2% for conventional semen (p < 0.0001). Abortion (4.4% vs. 5.4%) and stillbirth (8.4% vs. 7.2%) rates were not significantly different between sexed and conventional semen (p = 0.09). Dystocia rates were 15.5% for sexed and 19.6% for conventional semen (p = 0.002). Sexed semen use showed negative EVs through all investigated scenarios. The EVs from the implementation of 1, 2 and 3 sexed semen breedings were estimated to be $-6.69, $-14.01 and $-19.08, respectively. Total insemination cost and increased cost of age at first calving were the most important components associated with negative EV for sexed semen. Sensitivity analysis showed that proportion of conception rates of sexed semen to conventional semen and female calf value were the most important biological and economic factors influencing on the EV of sexed semen, respectively. Breakeven would be obtained with 77.4%-79.3% conception rates or female calf value of $719.5-$754.7 through investigated breeding scenarios when all other factors remained the same.